View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11233_low_23 (Length: 240)

Name: NF11233_low_23
Description: NF11233
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11233_low_23
NF11233_low_23
[»] chr2 (44 HSPs)
chr2 (17-240)||(6408680-6408902)
chr2 (18-110)||(41665762-41665853)
chr2 (20-116)||(23464737-23464832)
chr2 (18-116)||(1246368-1246466)
chr2 (17-116)||(3326775-3326873)
chr2 (27-116)||(42250835-42250923)
chr2 (18-110)||(40346043-40346134)
chr2 (18-116)||(38982025-38982124)
chr2 (18-116)||(32677527-32677624)
chr2 (23-110)||(6275529-6275616)
chr2 (18-110)||(28733875-28733966)
chr2 (18-110)||(37355088-37355179)
chr2 (18-110)||(43650086-43650177)
chr2 (18-110)||(44424647-44424738)
chr2 (42-110)||(45214801-45214868)
chr2 (19-110)||(2521262-2521352)
chr2 (18-80)||(34330054-34330116)
chr2 (18-80)||(43119360-43119422)
chr2 (17-102)||(16808793-16808877)
chr2 (17-102)||(16848074-16848158)
chr2 (22-102)||(2917071-2917150)
chr2 (18-110)||(15851583-15851674)
chr2 (18-110)||(17250923-17251014)
chr2 (18-110)||(17663676-17663767)
chr2 (18-110)||(31644404-31644495)
chr2 (22-101)||(375316-375394)
chr2 (128-179)||(11121376-11121427)
chr2 (136-210)||(8393389-8393462)
chr2 (18-80)||(24774917-24774979)
chr2 (18-80)||(26512123-26512185)
chr2 (136-210)||(36846936-36847009)
chr2 (21-110)||(7278575-7278663)
chr2 (18-102)||(11071720-11071802)
chr2 (17-110)||(38449676-38449768)
chr2 (18-114)||(247712-247807)
chr2 (42-110)||(2048792-2048859)
chr2 (42-102)||(3237799-3237858)
chr2 (42-110)||(8065034-8065101)
chr2 (152-192)||(16808703-16808743)
chr2 (152-192)||(16847984-16848024)
chr2 (18-110)||(20362035-20362125)
chr2 (18-110)||(25731148-25731239)
chr2 (42-102)||(27297653-27297712)
chr2 (19-79)||(35178785-35178845)
[»] chr6 (24 HSPs)
chr6 (20-108)||(31152953-31153040)
chr6 (18-110)||(15981846-15981937)
chr6 (18-110)||(16327175-16327267)
chr6 (18-110)||(16350573-16350665)
chr6 (27-116)||(3729483-3729571)
chr6 (20-108)||(197416-197503)
chr6 (18-110)||(1763865-1763956)
chr6 (18-110)||(31536064-31536155)
chr6 (17-80)||(5895782-5895845)
chr6 (18-80)||(6791428-6791490)
chr6 (18-80)||(9461345-9461407)
chr6 (21-102)||(7365542-7365622)
chr6 (18-110)||(5457239-5457330)
chr6 (18-110)||(19838983-19839074)
chr6 (25-80)||(12503605-12503660)
chr6 (127-178)||(12802790-12802841)
chr6 (42-101)||(30465940-30465998)
chr6 (18-80)||(12514577-12514639)
chr6 (42-116)||(34513175-34513248)
chr6 (63-116)||(9941119-9941171)
chr6 (18-110)||(11302907-11302998)
chr6 (50-110)||(30248946-30249005)
chr6 (18-102)||(31945883-31945966)
chr6 (18-110)||(33607407-33607498)
[»] chr4 (54 HSPs)
chr4 (18-110)||(40411305-40411396)
chr4 (17-101)||(52676071-52676155)
chr4 (18-116)||(21171776-21171873)
chr4 (18-108)||(43509133-43509222)
chr4 (22-80)||(54701281-54701339)
chr4 (17-110)||(22750804-22750896)
chr4 (18-110)||(20262356-20262447)
chr4 (18-102)||(20291392-20291475)
chr4 (18-110)||(25477277-25477368)
chr4 (18-110)||(52226071-52226162)
chr4 (18-110)||(52977608-52977699)
chr4 (18-116)||(5168031-5168128)
chr4 (38-104)||(30153190-30153255)
chr4 (18-110)||(34643447-34643537)
chr4 (18-110)||(38136407-38136498)
chr4 (18-102)||(41459639-41459722)
chr4 (18-110)||(41920000-41920091)
chr4 (38-110)||(54438582-54438653)
chr4 (42-110)||(56217015-56217082)
chr4 (125-180)||(7002345-7002400)
chr4 (18-101)||(29584946-29585028)
chr4 (18-115)||(20116502-20116599)
chr4 (18-80)||(26186746-26186808)
chr4 (18-116)||(31840148-31840245)
chr4 (18-80)||(31937383-31937445)
chr4 (18-116)||(32236883-32236980)
chr4 (18-108)||(44812571-44812660)
chr4 (64-110)||(45079774-45079820)
chr4 (37-102)||(19654499-19654563)
chr4 (27-80)||(26170258-26170311)
chr4 (37-102)||(51787842-51787906)
chr4 (17-110)||(52198690-52198782)
chr4 (45-101)||(3094409-3094464)
chr4 (17-100)||(3684159-3684242)
chr4 (18-110)||(39237551-39237642)
chr4 (42-102)||(54359759-54359818)
chr4 (17-80)||(32107896-32107959)
chr4 (18-101)||(37625096-37625178)
chr4 (18-80)||(24072819-24072881)
chr4 (42-116)||(33246453-33246526)
chr4 (18-80)||(37175013-37175075)
chr4 (136-210)||(39414408-39414481)
chr4 (18-108)||(43800860-43800949)
chr4 (18-116)||(14602609-14602708)
chr4 (18-107)||(21121019-21121107)
chr4 (18-110)||(39414288-39414377)
chr4 (42-110)||(5448738-5448805)
chr4 (136-180)||(20016695-20016739)
chr4 (42-110)||(20185618-20185685)
chr4 (18-102)||(39197004-39197087)
chr4 (17-101)||(45628046-45628128)
chr4 (42-110)||(48472457-48472524)
chr4 (42-110)||(52552473-52552540)
chr4 (20-80)||(52768890-52768950)
[»] chr1 (43 HSPs)
chr1 (18-116)||(3072190-3072285)
chr1 (18-102)||(8984630-8984713)
chr1 (18-110)||(32152209-32152300)
chr1 (18-116)||(35365939-35366036)
chr1 (38-110)||(36085041-36085112)
chr1 (18-110)||(44652822-44652913)
chr1 (18-110)||(47070922-47071013)
chr1 (18-101)||(46495360-46495443)
chr1 (37-110)||(46732921-46732993)
chr1 (18-102)||(291604-291687)
chr1 (17-101)||(4817876-4817959)
chr1 (17-101)||(4829676-4829759)
chr1 (18-110)||(5085050-5085141)
chr1 (18-110)||(8877823-8877914)
chr1 (18-110)||(9675628-9675719)
chr1 (18-110)||(20564826-20564917)
chr1 (18-102)||(23982561-23982644)
chr1 (17-117)||(29140608-29140707)
chr1 (18-110)||(48721829-48721920)
chr1 (127-201)||(4813326-4813400)
chr1 (18-80)||(16582584-16582646)
chr1 (18-108)||(28679785-28679873)
chr1 (29-110)||(51390498-51390578)
chr1 (18-110)||(3143454-3143545)
chr1 (50-110)||(9380721-9380781)
chr1 (18-102)||(10160763-10160846)
chr1 (18-110)||(15512742-15512833)
chr1 (18-110)||(28948925-28949016)
chr1 (18-102)||(32144362-32144445)
chr1 (18-110)||(47643591-47643682)
chr1 (18-78)||(47754634-47754694)
chr1 (19-102)||(15457784-15457866)
chr1 (18-80)||(24415051-24415113)
chr1 (18-80)||(34102387-34102449)
chr1 (29-110)||(5321984-5322064)
chr1 (19-80)||(31305370-31305431)
chr1 (18-102)||(2342955-2343038)
chr1 (18-110)||(13145469-13145560)
chr1 (18-101)||(13352885-13352966)
chr1 (42-110)||(25063285-25063352)
chr1 (18-110)||(33231891-33231982)
chr1 (46-110)||(34012566-34012629)
chr1 (18-78)||(38680526-38680586)
[»] chr7 (37 HSPs)
chr7 (20-110)||(2409875-2409964)
chr7 (18-110)||(1324760-1324851)
chr7 (18-102)||(21801026-21801109)
chr7 (18-110)||(21809609-21809700)
chr7 (17-108)||(26200932-26201022)
chr7 (29-110)||(27162865-27162946)
chr7 (18-102)||(6376102-6376186)
chr7 (18-110)||(28663807-28663898)
chr7 (18-110)||(42983576-42983667)
chr7 (18-108)||(36116373-36116462)
chr7 (18-110)||(19236029-19236120)
chr7 (18-110)||(23876089-23876180)
chr7 (18-110)||(35128436-35128527)
chr7 (18-102)||(37673789-37673872)
chr7 (18-102)||(40263763-40263846)
chr7 (18-110)||(49100723-49100814)
chr7 (18-117)||(25750420-25750518)
chr7 (18-80)||(31373689-31373751)
chr7 (136-210)||(37136356-37136429)
chr7 (18-104)||(46783809-46783894)
chr7 (17-102)||(33181346-33181430)
chr7 (18-110)||(2276539-2276630)
chr7 (18-110)||(18122004-18122095)
chr7 (18-110)||(21388294-21388385)
chr7 (42-110)||(48767641-48767708)
chr7 (23-102)||(13907713-13907791)
chr7 (18-101)||(20123502-20123585)
chr7 (18-101)||(24700667-24700749)
chr7 (29-116)||(37048098-37048183)
chr7 (17-80)||(48610127-48610190)
chr7 (18-80)||(10685137-10685199)
chr7 (19-101)||(27170064-27170145)
chr7 (127-172)||(24700598-24700643)
chr7 (42-110)||(4089462-4089529)
chr7 (18-97)||(21752580-21752657)
chr7 (18-102)||(27213539-27213622)
chr7 (136-180)||(42993074-42993118)
[»] chr3 (44 HSPs)
chr3 (17-110)||(50363077-50363169)
chr3 (18-110)||(26517179-26517270)
chr3 (18-110)||(33287917-33288008)
chr3 (18-116)||(14645847-14645944)
chr3 (18-80)||(26243523-26243585)
chr3 (18-110)||(12077707-12077798)
chr3 (18-110)||(31474475-31474566)
chr3 (18-101)||(48901490-48901572)
chr3 (18-101)||(48903056-48903138)
chr3 (18-80)||(41727231-41727293)
chr3 (18-116)||(11388172-11388271)
chr3 (19-80)||(41543600-41543661)
chr3 (42-110)||(5504539-5504606)
chr3 (18-110)||(27638041-27638132)
chr3 (18-110)||(30476092-30476183)
chr3 (18-110)||(31819457-31819548)
chr3 (18-110)||(44083678-44083769)
chr3 (42-110)||(48309519-48309586)
chr3 (38-110)||(48581389-48581460)
chr3 (22-110)||(51263137-51263224)
chr3 (42-101)||(22659655-22659713)
chr3 (17-116)||(28229215-28229313)
chr3 (63-110)||(29349474-29349520)
chr3 (17-80)||(46048572-46048635)
chr3 (18-76)||(12236334-12236392)
chr3 (29-102)||(26043081-26043152)
chr3 (18-80)||(26121383-26121445)
chr3 (18-108)||(28477436-28477525)
chr3 (18-84)||(29645409-29645475)
chr3 (18-80)||(39617243-39617305)
chr3 (150-192)||(48214375-48214417)
chr3 (47-116)||(35765602-35765670)
chr3 (18-110)||(2421135-2421226)
chr3 (127-179)||(11396887-11396939)
chr3 (42-102)||(20945272-20945331)
chr3 (42-110)||(21933001-21933068)
chr3 (18-110)||(29676703-29676794)
chr3 (18-110)||(35055837-35055928)
chr3 (24-80)||(39931938-39931994)
chr3 (18-110)||(40645725-40645816)
chr3 (46-110)||(41308740-41308803)
chr3 (18-110)||(42010919-42011010)
chr3 (18-110)||(44338132-44338223)
chr3 (18-110)||(50524940-50525031)
[»] chr8 (36 HSPs)
chr8 (18-110)||(57151-57242)
chr8 (18-110)||(23399740-23399831)
chr8 (18-110)||(43191440-43191531)
chr8 (18-117)||(38761314-38761412)
chr8 (18-110)||(24512130-24512221)
chr8 (18-108)||(12762894-12762983)
chr8 (17-110)||(1177119-1177211)
chr8 (18-110)||(3113496-3113587)
chr8 (18-110)||(24276520-24276611)
chr8 (18-110)||(24962328-24962419)
chr8 (18-110)||(25185082-25185173)
chr8 (18-110)||(25198341-25198432)
chr8 (18-110)||(31746368-31746459)
chr8 (18-102)||(36309567-36309650)
chr8 (18-80)||(7772564-7772626)
chr8 (18-116)||(30262495-30262592)
chr8 (17-75)||(35794793-35794851)
chr8 (20-110)||(12998651-12998745)
chr8 (29-110)||(36437564-36437644)
chr8 (18-110)||(2031268-2031359)
chr8 (18-102)||(10396201-10396284)
chr8 (18-102)||(14577623-14577706)
chr8 (18-110)||(26878691-26878782)
chr8 (18-110)||(40517792-40517883)
chr8 (18-110)||(43980546-43980637)
chr8 (42-110)||(45203834-45203901)
chr8 (18-101)||(885513-885595)
chr8 (18-101)||(7172271-7172353)
chr8 (18-101)||(41087026-41087108)
chr8 (127-181)||(12894087-12894141)
chr8 (18-80)||(38202984-38203046)
chr8 (18-80)||(38770179-38770241)
chr8 (18-107)||(23280703-23280791)
chr8 (18-79)||(37141778-37141839)
chr8 (18-102)||(25888647-25888730)
chr8 (18-110)||(40337154-40337245)
[»] chr5 (34 HSPs)
chr5 (18-108)||(25017637-25017726)
chr5 (17-102)||(5845227-5845311)
chr5 (17-110)||(35568966-35569058)
chr5 (18-102)||(4857463-4857546)
chr5 (18-102)||(20946139-20946222)
chr5 (42-110)||(29866265-29866332)
chr5 (18-78)||(41521240-41521300)
chr5 (18-108)||(3247237-3247326)
chr5 (18-116)||(16969426-16969523)
chr5 (18-108)||(27798208-27798297)
chr5 (19-116)||(556054-556150)
chr5 (17-102)||(5151169-5151253)
chr5 (18-115)||(10523230-10523326)
chr5 (127-180)||(10656754-10656807)
chr5 (17-110)||(16496487-16496579)
chr5 (136-201)||(34676296-34676361)
chr5 (17-110)||(40979173-40979265)
chr5 (18-110)||(3558988-3559079)
chr5 (18-110)||(4738682-4738773)
chr5 (42-110)||(18729668-18729735)
chr5 (18-110)||(21912172-21912263)
chr5 (18-78)||(36177344-36177404)
chr5 (18-110)||(38972088-38972179)
chr5 (18-110)||(39690447-39690538)
chr5 (55-110)||(5764184-5764238)
chr5 (19-110)||(42644439-42644529)
chr5 (17-75)||(19089016-19089074)
chr5 (29-110)||(8717920-8718000)
chr5 (17-110)||(9946319-9946411)
chr5 (17-102)||(14044467-14044551)
chr5 (17-102)||(36347570-36347654)
chr5 (18-78)||(10934058-10934118)
chr5 (18-94)||(24781245-24781320)
chr5 (50-98)||(32068070-32068118)
[»] scaffold0012 (1 HSPs)
scaffold0012 (18-110)||(99779-99870)
[»] scaffold0013 (2 HSPs)
scaffold0013 (18-72)||(61281-61335)
scaffold0013 (18-110)||(49188-49280)
[»] scaffold0121 (1 HSPs)
scaffold0121 (63-116)||(24156-24208)
[»] scaffold1091 (1 HSPs)
scaffold1091 (42-110)||(1875-1942)
[»] scaffold0005 (1 HSPs)
scaffold0005 (18-116)||(214670-214769)
[»] scaffold0166 (1 HSPs)
scaffold0166 (18-94)||(23628-23703)


Alignment Details
Target: chr2 (Bit Score: 155; Significance: 2e-82; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 17 - 240
Target Start/End: Original strand, 6408680 - 6408902
Alignment:
Q  17 attaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgtgtagaa 116  Q
    ||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| |||||    
T  6408680 attaatattattaaattattatttatttgtatgtgtattaaattcaacttttcatatttcaagaaaa-gttaatagtattaattaaaggtatgtttagaa 6408778  T
Q  117 gnnnnnnntacatctaatcatttgaaaagaggtttatatttaaagataattttttagtcaaatgaatatttatatatagagacgggagggagtacacaag 216  Q
    |       | |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  6408779 gaaaaaaatgcatctaatcatttggaaagaggtttatatttaaagataattttttagtcaaatgaatgtttatatataaagacgggagggagtacacaag 6408878  T
Q  217 aacttttaagccaatttcaaagga 240  Q
    ||||||||||||| ||| ||||||    
T  6408879 aacttttaagccagttttaaagga 6408902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 18 - 110
Target Start/End: Original strand, 41665762 - 41665853
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    |||||| ||| |||||||  ||| |||||||||||| |||||| |||||||||||||||||| | |||||||||||||||||||| |||||||    
T  41665762 ttaatagtatcaaattgtcctttgtttgtatgtgtattaaatttaacttttcatatttcaag-acaagttaatagtattaattaggggtatgt 41665853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 20 - 116
Target Start/End: Original strand, 23464737 - 23464832
Alignment:
Q  20 aatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgtgtagaa 116  Q
    |||||||| |||||||  ||||||||||| |||| ||||||  |||||||||||||||| || |||||| ||||||||||||| ||||| |||||||    
T  23464737 aatattatcaaattgtcctttatttgtatatgtattaaatttgacttttcatatttcaa-aacaagttagtagtattaattaggggtatttgtagaa 23464832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 116
Target Start/End: Complemental strand, 1246466 - 1246368
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaac-ttttcatatttcaagaaaaagttaatagtattaattagaggtatgtgtagaa 116  Q
    |||||||||| |||||||| ||| |||||||||||| ||||||  || ||||||||||||||| | ||| |||||||||||||||| ||||||| |||||    
T  1246466 ttaatattatgaaattgttctttgtttgtatgtgtattaaatttgactttttcatatttcaag-acaagataatagtattaattaggggtatgtttagaa 1246368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 17 - 116
Target Start/End: Original strand, 3326775 - 3326873
Alignment:
Q  17 attaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgtgtagaa 116  Q
    |||||||||||||||||||  ||| ||| ||||||||  ||||| ||||||||||||||||||| || | || ||||||||||||| ||||||| |||||    
T  3326775 attaatattattaaattgtcctttgtttatatgtgtataaaatttaacttttcatatttcaagataacg-tagtagtattaattaggggtatgtttagaa 3326873  T

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Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 27 - 116
Target Start/End: Complemental strand, 42250923 - 42250835
Alignment:
Q  27 ttaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgtgtagaa 116  Q
    ||||||||| |||||||| |||||||| ||||||  |||||| |||||||||| | |||||||||||||||||||||  ||||| |||||    
T  42250923 ttaaattgtcatttatttatatgtgtattaaatttgactttttatatttcaag-acaagttaatagtattaattagaaatatgtttagaa 42250835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 110
Target Start/End: Complemental strand, 40346134 - 40346043
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    ||||||||| ||||||||  |||||||||||||||| ||||||  |||||||||||||||||   |||||  ||||||||||||| |||||||    
T  40346134 ttaatattactaaattgtcttttatttgtatgtgtattaaatttgacttttcatatttcaag-gcaagtttgtagtattaattaggggtatgt 40346043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 18 - 116
Target Start/End: Complemental strand, 38982124 - 38982025
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaaga-aaaagttaatagtattaattagaggtatgtgtagaa 116  Q
    |||||||||  ||||| || ||| |||||||||||| ||||||  |||||||||||||||||| ||  |||| ||||||||||||| ||||||| |||||    
T  38982124 ttaatattaccaaattattttttgtttgtatgtgtattaaatttgacttttcatatttcaagacaattgttagtagtattaattaggggtatgtatagaa 38982025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 18 - 116
Target Start/End: Original strand, 32677527 - 32677624
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgtgtagaa 116  Q
    |||||||| | ||||||| |||| ||||||  |||||||||||  | |||||||||||||||| ||| ||| ||||||||||||| ||||||| |||||    
T  32677527 ttaatattttcaaattgtcatttgtttgtacatgtactaaatttgatttttcatatttcaagacaaa-ttagtagtattaattaggggtatgtttagaa 32677624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 23 - 110
Target Start/End: Complemental strand, 6275616 - 6275529
Alignment:
Q  23 attattaaattgttatttatttgtatgtgtactaaattcaact-tttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    ||||| |||||||  ||| ||||||| |||| |||||| |||| ||||||||||||||| || ||||||| ||||||||||||||||||    
T  6275616 attatgaaattgtcttttgtttgtatatgtattaaatttaactatttcatatttcaagacaa-gttaataatattaattagaggtatgt 6275529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 110
Target Start/End: Original strand, 28733875 - 28733966
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    |||||||||  ||||||| |||| ||||||||||||  |||||  |||||| ||||||||||| ||| ||| ||||||||||||| |||||||    
T  28733875 ttaatattaccaaattgtcatttgtttgtatgtgtataaaatttgactttttatatttcaagataaa-ttagtagtattaattaggggtatgt 28733966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 110
Target Start/End: Original strand, 37355088 - 37355179
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    |||||||||  ||||||| |||| |||||||||||| ||||||  ||||||||||||||||| | ||| ||| |||||||||||  |||||||    
T  37355088 ttaatattacaaaattgtcatttgtttgtatgtgtattaaatttgacttttcatatttcaag-acaagataaaagtattaattaagggtatgt 37355179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 110
Target Start/End: Original strand, 43650086 - 43650177
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    ||||||||| ||||||||| ||| |||||||||||| ||||||  || ||| | ||||||| || |||||| | |||||||||||||||||||    
T  43650086 ttaatattactaaattgttctttgtttgtatgtgtattaaatttgaccttttaaatttcaa-aacaagttagttgtattaattagaggtatgt 43650177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 110
Target Start/End: Original strand, 44424647 - 44424738
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    |||||||||  |||||||  ||| |||||||||||| ||||||  ||||||||||||||||| | ||| || ||||||||||||| |||||||    
T  44424647 ttaatattacgaaattgtcctttgtttgtatgtgtattaaatttgacttttcatatttcaag-acaagatagtagtattaattaggggtatgt 44424738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 42 - 110
Target Start/End: Original strand, 45214801 - 45214868
Alignment:
Q  42 tttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    |||||||||||| |||||| |||||||||||||| |||| ||| ||| ||||||||||||| |||||||    
T  45214801 tttgtatgtgtattaaatttaacttttcatattttaagataaa-ttagtagtattaattaggggtatgt 45214868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 110
Target Start/End: Complemental strand, 2521352 - 2521262
Alignment:
Q  19 taatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    |||||||||||||||||  ||| |||||||||||| ||||||  ||||||  |||||||||| ||| ||| ||| ||||||||| |||||||    
T  2521352 taatattattaaattgtcttttgtttgtatgtgtattaaatttgactttttgtatttcaagacaaa-ttagtaggattaattaggggtatgt 2521262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 18 - 80
Target Start/End: Original strand, 34330054 - 34330116
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaaga 80  Q
    |||||||||  |||||||  ||| |||||||||||| |||||| |||||||||||||||||||    
T  34330054 ttaatattacaaaattgtcctttgtttgtatgtgtattaaatttaacttttcatatttcaaga 34330116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 18 - 80
Target Start/End: Complemental strand, 43119422 - 43119360
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaaga 80  Q
    ||||||||| |||||||| |||| |||||||||||| ||||||  | ||||||||||||||||    
T  43119422 ttaatattactaaattgtcatttgtttgtatgtgtattaaatttgatttttcatatttcaaga 43119360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 102
Target Start/End: Complemental strand, 16808877 - 16808793
Alignment:
Q  17 attaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattag 102  Q
    |||||||||| |||||||| |||| ||||||||| || |||| | || ||||||||||||||| | |||||| |||||| ||||||    
T  16808877 attaatattactaaattgtcatttgtttgtatgtatattaaaattaatttttcatatttcaag-acaagttagtagtataaattag 16808793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 102
Target Start/End: Complemental strand, 16848158 - 16848074
Alignment:
Q  17 attaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattag 102  Q
    |||||||||| |||||||| |||| ||||||||| || |||| | || ||||||||||||||| | |||||| |||||| ||||||    
T  16848158 attaatattactaaattgtcatttgtttgtatgtatattaaaattaatttttcatatttcaag-acaagttagtagtataaattag 16848074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 102
Target Start/End: Complemental strand, 2917150 - 2917071
Alignment:
Q  22 tattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattag 102  Q
    ||||| ||||||||  ||| |||||||||||| |||||| ||||||| |||||| ||| | |||||| |||||||||||||    
T  2917150 tattaataaattgtcttttgtttgtatgtgtattaaatttaactttttatattttaag-acaagttagtagtattaattag 2917071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 110
Target Start/End: Original strand, 15851583 - 15851674
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    |||||||||| |||||||  ||| ||| |||||||| ||||||  | |||||||||||||||| |||  || ||||||||||||| |||||||    
T  15851583 ttaatattatgaaattgtcctttgtttatatgtgtattaaatttgaattttcatatttcaagacaaa-atagtagtattaattaggggtatgt 15851674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 110
Target Start/End: Complemental strand, 17251014 - 17250923
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    |||||||||  ||||||| |||| |||||||||||| | || |  ||||||||||||||||| | ||| || |||||||||||| ||||||||    
T  17251014 ttaatattacaaaattgtcatttgtttgtatgtgtatttaaattgacttttcatatttcaag-acaagatagtagtattaattaaaggtatgt 17250923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 110
Target Start/End: Original strand, 17663676 - 17663767
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    ||||||||| ||||||||  ||| |||||||||||| ||||||  ||||||  |||||||||| ||| ||| ||| ||||||||| |||||||    
T  17663676 ttaatattactaaattgtcctttgtttgtatgtgtattaaatttgactttttgtatttcaagacaaa-ttagtaggattaattaggggtatgt 17663767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 110
Target Start/End: Complemental strand, 31644495 - 31644404
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    |||||||||  ||||||| |||| |||||||||||| ||||||  | |||||||| ||||||| |||  || ||||||||||||| |||||||    
T  31644495 ttaatattacaaaattgtcatttgtttgtatgtgtattaaatttgatttttcataattcaagataaa-atagtagtattaattaggggtatgt 31644404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 101
Target Start/End: Complemental strand, 375394 - 375316
Alignment:
Q  22 tattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaatta 101  Q
    |||||| ||||||| |||| |||||||||||| ||||||  | ||||||||||||||| | |||||| ||||||| ||||    
T  375394 tattatcaaattgtcatttgtttgtatgtgtattaaatttgatttttcatatttcaag-acaagttagtagtattgatta 375316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 179
Target Start/End: Original strand, 11121376 - 11121427
Alignment:
Q  128 atctaatcatttgaaaagaggtttatatttaaagataattttttagtcaaat 179  Q
    ||||||| |||||||||  | |||||||||| ||||||||||||||||||||    
T  11121376 atctaataatttgaaaacggatttatatttagagataattttttagtcaaat 11121427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 210
Target Start/End: Original strand, 8393389 - 8393462
Alignment:
Q  136 atttgaaaagaggtttatatttaaagataattttttagtcaaatgaatatttatatatagagacgggagggagta 210  Q
    |||||||||  ||||||||||||  |||||||||||||| |||||  | | ||||||||||||| ||||||||||    
T  8393389 atttgaaaatgggtttatatttagggataattttttagttaaatgtgtgtctatatatagagac-ggagggagta 8393462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 80
Target Start/End: Original strand, 24774917 - 24774979
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaaga 80  Q
    |||||||||  |||||||  ||| |||||||||||| ||||||  ||||||||||||||||||    
T  24774917 ttaatattaccaaattgtcttttgtttgtatgtgtattaaatttgacttttcatatttcaaga 24774979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 80
Target Start/End: Original strand, 26512123 - 26512185
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaaga 80  Q
    ||||||||| ||||||||  ||| |||||||||||| ||||||  |||||| |||||||||||    
T  26512123 ttaatattactaaattgtcctttgtttgtatgtgtattaaatttgactttttatatttcaaga 26512185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 210
Target Start/End: Original strand, 36846936 - 36847009
Alignment:
Q  136 atttgaaaagaggtttatatttaaagataattttttagtcaaatgaatatttatatatagagacgggagggagta 210  Q
    |||||||||  ||||||||||||  |||||||||||||| |||||  | | ||||||||||||| ||||||||||    
T  36846936 atttgaaaatgggtttatatttagggataattttttagttaaatgtgtgtctatatatagagac-ggagggagta 36847009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 110
Target Start/End: Complemental strand, 7278663 - 7278575
Alignment:
Q  21 atattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    ||||||| ||||||   ||| |||||||||||| ||||||  ||| || ||||||||||| || |||| ||||||||||||| |||||||    
T  7278663 atattatcaaattgccctttgtttgtatgtgtattaaatttgactattaatatttcaagataa-gttagtagtattaattaggggtatgt 7278575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 102
Target Start/End: Original strand, 11071720 - 11071802
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattag 102  Q
    ||||||||| ||||||||  |||  ||||||||||| ||||||  |||||||||||||||  ||| ||||| || ||||||||||    
T  11071720 ttaatattactaaattgtcctttgcttgtatgtgtattaaatttgacttttcatatttca--aaacagttagtaatattaattag 11071802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 110
Target Start/End: Complemental strand, 38449768 - 38449676
Alignment:
Q  17 attaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    ||||||||||| ||||| | |||| |||||||||||| ||||||  | | ||||||||||||| | | || |||| |||||||||| |||||||    
T  38449768 attaatattatcaaattatcatttgtttgtatgtgtattaaatttgattattcatatttcaag-acaggtcaataatattaattaggggtatgt 38449676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 114
Target Start/End: Original strand, 247712 - 247807
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgtgtag 114  Q
    |||||||||| ||||||   ||| ||||||||| || ||||||  ||||||||||| ||||| | |||||| ||||||| ||||  |||||||||||    
T  247712 ttaatattataaaattgccctttgtttgtatgtatattaaatttgacttttcatatctcaag-acaagttagtagtattgattaagggtatgtgtag 247807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 110
Target Start/End: Complemental strand, 2048859 - 2048792
Alignment:
Q  42 tttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    |||||||||||| ||||||  |||||| |||||||||| | |||||| ||||||| ||||| |||||||    
T  2048859 tttgtatgtgtattaaatttgactttttatatttcaag-acaagttagtagtatttattaggggtatgt 2048792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 102
Target Start/End: Original strand, 3237799 - 3237858
Alignment:
Q  42 tttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattag 102  Q
    |||||||||||| ||||||  ||||||||||||||||| | ||| || |||||||||||||    
T  3237799 tttgtatgtgtattaaatttgacttttcatatttcaag-acaagatagtagtattaattag 3237858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 110
Target Start/End: Complemental strand, 8065101 - 8065034
Alignment:
Q  42 tttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    |||||||||||| ||| ||  | |||||||||||||||| || |||| ||||||||||||| |||||||    
T  8065101 tttgtatgtgtattaactttgatttttcatatttcaagacaa-gttagtagtattaattaggggtatgt 8065034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 192
Target Start/End: Complemental strand, 16808743 - 16808703
Alignment:
Q  152 atatttaaagataattttttagtcaaatgaatatttatata 192  Q
    ||||||| ||| ||||||||| |||||||||||||||||||    
T  16808743 atatttagagacaattttttaatcaaatgaatatttatata 16808703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 192
Target Start/End: Complemental strand, 16848024 - 16847984
Alignment:
Q  152 atatttaaagataattttttagtcaaatgaatatttatata 192  Q
    ||||||| ||| ||||||||| |||||||||||||||||||    
T  16848024 atatttagagacaattttttaatcaaatgaatatttatata 16847984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 110
Target Start/End: Original strand, 20362035 - 20362125
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    ||||||||| ||||||||  ||| |||||||||||| ||||||  ||||||  |||||||||| ||| ||| ||| ||||||||| |||||||    
T  20362035 ttaatattactaaattgtcctttgtttgtatgtgta-taaatttgactttttgtatttcaagacaaa-ttagtaggattaattaggggtatgt 20362125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 110
Target Start/End: Complemental strand, 25731239 - 25731148
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    |||||||||| ||||| |  ||| ||||||||| || ||||||  | ||||||||||| |||| || |||| ||||||||||||| |||||||    
T  25731239 ttaatattatcaaattatcttttgtttgtatgtatattaaatttgatttttcatattttaagacaa-gttagtagtattaattaggggtatgt 25731148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 102
Target Start/End: Original strand, 27297653 - 27297712
Alignment:
Q  42 tttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattag 102  Q
    |||||||||||| ||||||  ||||||||||||||||| | ||| || |||||||||||||    
T  27297653 tttgtatgtgtattaaatttgacttttcatatttcaag-acaagatagtagtattaattag 27297712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 79
Target Start/End: Complemental strand, 35178845 - 35178785
Alignment:
Q  19 taatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaag 79  Q
    ||||||||  |||||||  ||||||||||| |||| ||||||  |||||||||||||||||    
T  35178845 taatattacgaaattgtcttttatttgtatttgtattaaatttgacttttcatatttcaag 35178785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 49; Significance: 4e-19; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 20 - 108
Target Start/End: Complemental strand, 31153040 - 31152953
Alignment:
Q  20 aatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtat 108  Q
    ||||||| ||||||||||||| |||||||||||| ||||||  ||||||||||||| || || ||||||||| ||||||||||||||||    
T  31153040 aatattactaaattgttatttgtttgtatgtgtattaaatttgacttttcatattttaa-aacaagttaataatattaattagaggtat 31152953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 18 - 110
Target Start/End: Original strand, 15981846 - 15981937
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    |||||||||  ||||||| |||  |||||||||||  |||||| |||||||||||||||||| | ||||||||||||||||||| ||||||||    
T  15981846 ttaatattaccaaattgtcattagtttgtatgtgtcttaaatttaacttttcatatttcaag-acaagttaatagtattaattataggtatgt 15981937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 110
Target Start/End: Original strand, 16327175 - 16327267
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagtta-atagtattaattagaggtatgt 110  Q
    |||||||||  ||||||| |||| ||||||| |||| |||||| |||||||||||||||||| | ||||||  |||||||||||||||||||||    
T  16327175 ttaatattaccaaattgtcatttgtttgtatttgtattaaatttaacttttcatatttcaag-acaagttatttagtattaattagaggtatgt 16327267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 110
Target Start/End: Original strand, 16350573 - 16350665
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagtta-atagtattaattagaggtatgt 110  Q
    |||||||||  ||||||| |||| ||||||| |||| |||||| |||||||||||||||||| | ||||||  |||||||||||||||||||||    
T  16350573 ttaatattaccaaattgtcatttgtttgtatttgtattaaatttaacttttcatatttcaag-acaagttatttagtattaattagaggtatgt 16350665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 27 - 116
Target Start/End: Original strand, 3729483 - 3729571
Alignment:
Q  27 ttaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgtgtagaa 116  Q
    ||||||||| |||| |||||||||||| |||||| |||||| ||||||||||| | |||||| || ||||||||||  |||||| |||||    
T  3729483 ttaaattgtcatttgtttgtatgtgtattaaatttaactttacatatttcaag-acaagttagtaatattaattaggagtatgtttagaa 3729571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 20 - 108
Target Start/End: Complemental strand, 197503 - 197416
Alignment:
Q  20 aatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtat 108  Q
    |||||||||||||||| |||| |||||||||||| |||||| || ||||   |||| ||| | |||||| |||||||||||||||||||    
T  197503 aatattattaaattgtcatttgtttgtatgtgtattaaatttaattttttcaattttaag-acaagttagtagtattaattagaggtat 197416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 110
Target Start/End: Original strand, 1763865 - 1763956
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    ||||||||| ||||||||  ||| |||||||||||| ||||||  |||||||| |||||||| | |||||| ||||||||||||  |||||||    
T  1763865 ttaatattactaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaag-acaagttagtagtattaattaagggtatgt 1763956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 110
Target Start/End: Original strand, 31536064 - 31536155
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    |||||||||| ||||| |  ||| ||| |||||||| ||||||  ||||||||||||||||| | |||||| |||||||||||| ||||||||    
T  31536064 ttaatattatcaaattatcttttgtttatatgtgtattaaatttgacttttcatatttcaag-ataagttagtagtattaattataggtatgt 31536155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 80
Target Start/End: Original strand, 5895782 - 5895845
Alignment:
Q  17 attaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaaga 80  Q
    ||||||||||  |||||||  ||||||| |||||||| |||||| |||||||||||||||||||    
T  5895782 attaatattacgaaattgtcctttatttttatgtgtattaaatttaacttttcatatttcaaga 5895845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 18 - 80
Target Start/End: Original strand, 6791428 - 6791490
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaaga 80  Q
    |||||||||||||||||| |||| |||||||||||| ||||||  |||||| | |||||||||    
T  6791428 ttaatattattaaattgtcatttgtttgtatgtgtattaaatttgactttttaaatttcaaga 6791490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 18 - 80
Target Start/End: Original strand, 9461345 - 9461407
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaaga 80  Q
    ||||||||| |||||| || ||| |||||||||||| ||||||  ||||||||||||||||||    
T  9461345 ttaatattactaaattattctttgtttgtatgtgtattaaatttgacttttcatatttcaaga 9461407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 102
Target Start/End: Original strand, 7365542 - 7365622
Alignment:
Q  21 atattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattag 102  Q
    |||||| |||||| | |||||||||||| |||| || |||  | |||||||||||||| || ||||||||||||||||||||    
T  7365542 atattactaaattatcatttatttgtatttgtattatatttgatttttcatatttcaa-aataagttaatagtattaattag 7365622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 110
Target Start/End: Original strand, 5457239 - 5457330
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    |||||||||| |||||||| ||| ||||||  |||| ||||||  | |||| | ||||||| || |||||| |||||||||||||||||||||    
T  5457239 ttaatattatcaaattgttctttgtttgtaaatgtattaaatttgattttttaaatttcaa-aacaagttagtagtattaattagaggtatgt 5457330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 110
Target Start/End: Original strand, 19838983 - 19839074
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    ||||||||| ||||||||  ||| |||||||||||| ||||||  ||||||  |||||||||| ||| ||| ||| ||||||||| |||||||    
T  19838983 ttaatattactaaattgtcctttgtttgtatgtgtattaaatttgactttttgtatttcaagataaa-ttagtaggattaattaggggtatgt 19839074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 80
Target Start/End: Complemental strand, 12503660 - 12503605
Alignment:
Q  25 tattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaaga 80  Q
    |||||||||||  ||| |||||||||||| ||||||  ||||||||||||||||||    
T  12503660 tattaaattgtcttttgtttgtatgtgtagtaaatttgacttttcatatttcaaga 12503605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 127 - 178
Target Start/End: Complemental strand, 12802841 - 12802790
Alignment:
Q  127 catctaatcatttgaaaagaggtttatatttaaagataattttttagtcaaa 178  Q
    |||||| | ||||||||||||||||||||||| ||| || ||||||||||||    
T  12802841 catctagtaatttgaaaagaggtttatatttagagacaaatttttagtcaaa 12802790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 42 - 101
Target Start/End: Complemental strand, 30465998 - 30465940
Alignment:
Q  42 tttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaatta 101  Q
    |||||||||||| ||||||  ||||||||||||||||| | |||||| ||||||||||||    
T  30465998 tttgtatgtgtattaaatttgacttttcatatttcaag-ataagttagtagtattaatta 30465940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 80
Target Start/End: Complemental strand, 12514639 - 12514577
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaaga 80  Q
    |||||||||  |||||||  ||| |||||||||||| ||||||  ||||||||||||||||||    
T  12514639 ttaatattaccaaattgtcttttgtttgtatgtgtattaaatttgacttttcatatttcaaga 12514577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 116
Target Start/End: Complemental strand, 34513248 - 34513175
Alignment:
Q  42 tttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgtgtagaa 116  Q
    |||||||||||| ||||||  ||||||||||||||||| | ||| || ||||| ||||||| ||||||| |||||    
T  34513248 tttgtatgtgtattaaatttgacttttcatatttcaag-acaagatagtagtaataattaggggtatgtttagaa 34513175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 63 - 116
Target Start/End: Original strand, 9941119 - 9941171
Alignment:
Q  63 acttttcatatttcaagaaaaagttaatagtattaattagaggtatgtgtagaa 116  Q
    ||||||||||||| |||| || ||||||||||||||||| |||||||| |||||    
T  9941119 acttttcatatttaaagacaa-gttaatagtattaattaaaggtatgtttagaa 9941171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 110
Target Start/End: Original strand, 11302907 - 11302998
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    |||||||||  |||||||  ||| |||| ||||||| ||||||  |||||||| ||||||||| ||| | | ||||||||||||| |||||||    
T  11302907 ttaatattacaaaattgtcctttgtttgcatgtgtattaaatttgacttttcacatttcaagacaaaat-agtagtattaattaggggtatgt 11302998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 110
Target Start/End: Original strand, 30248946 - 30249005
Alignment:
Q  50 tgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    |||| ||||||  |||||||||||||||||| || |||| ||||||||||||| |||||||    
T  30248946 tgtattaaatttgacttttcatatttcaagacaa-gttagtagtattaattaggggtatgt 30249005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 102
Target Start/End: Complemental strand, 31945966 - 31945883
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattag 102  Q
    |||||||||  |||||||  ||| ||| |||||||| ||||||  ||||| ||||||||||| | |||||| |||||||||||||    
T  31945966 ttaatattaccaaattgtcgtttgtttatatgtgtattaaatttgactttacatatttcaag-acaagttagtagtattaattag 31945883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 110
Target Start/End: Original strand, 33607407 - 33607498
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    |||||||||| ||||| |  ||| |||||||||||  ||||||  ||||||||||||||| | | ||||||  |||||||||||| |||||||    
T  33607407 ttaatattatcaaattatcctttgtttgtatgtgtgttaaatttgacttttcatatttcatg-ataagttagcagtattaattaggggtatgt 33607498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 49; Significance: 4e-19; HSPs: 54)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 18 - 110
Target Start/End: Complemental strand, 40411396 - 40411305
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    |||||||||| ||||||| |||| |||||||||||| |||||| |||||||||||||||||| | ||| ||||| |||||||||| |||||||    
T  40411396 ttaatattatgaaattgtcatttgtttgtatgtgtattaaatttaacttttcatatttcaag-acaagataataatattaattaggggtatgt 40411305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 17 - 101
Target Start/End: Original strand, 52676071 - 52676155
Alignment:
Q  17 attaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaatta 101  Q
    |||||||||||||||||||  ||||||| |||||||| ||||||  |||||||| |||||||  | |||||||||||||||||||    
T  52676071 attaatattattaaattgtcctttatttatatgtgtattaaatttgacttttcaaatttcaaagacaagttaatagtattaatta 52676155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 116
Target Start/End: Original strand, 21171776 - 21171873
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgtgtagaa 116  Q
    |||||||||| ||||| |  |||||||||||||||| ||||||  ||||| ||||||||||| | |||||| ||||||||||||| ||||||| |||||    
T  21171776 ttaatattatcaaattatcttttatttgtatgtgtattaaatttgactttacatatttcaag-ataagttagtagtattaattaggggtatgtttagaa 21171873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 108
Target Start/End: Original strand, 43509133 - 43509222
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtat 108  Q
    |||||||||| |||||||  ||| |||||||||||| |||||| ||||||||| ||||||||| ||| ||| ||||||||||||| |||||    
T  43509133 ttaatattatcaaattgtcttttgtttgtatgtgtattaaatttaacttttcaaatttcaagacaaa-ttagtagtattaattaggggtat 43509222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 22 - 80
Target Start/End: Complemental strand, 54701339 - 54701281
Alignment:
Q  22 tattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaaga 80  Q
    |||||| ||||||| ||||||||||||||||| |||||| |||||||||||||||||||    
T  54701339 tattatcaaattgtcatttatttgtatgtgtattaaatttaacttttcatatttcaaga 54701281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 17 - 110
Target Start/End: Complemental strand, 22750896 - 22750804
Alignment:
Q  17 attaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    ||||||||||  ||||||| |||| |||||||||||| ||||||  ||||||||||||||||| | || ||| ||||||||||||| |||||||    
T  22750896 attaatattaccaaattgtcatttgtttgtatgtgtattaaatttgacttttcatatttcaag-acaacttagtagtattaattaggggtatgt 22750804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 110
Target Start/End: Complemental strand, 20262447 - 20262356
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    |||||||||  |||||||||||| |||||||||||| ||||||  |||||||||||||||| || ||| || ||||||||||||  |||||||    
T  20262447 ttaatattacgaaattgttatttgtttgtatgtgtattaaatttgacttttcatatttcaa-aacaagatagtagtattaattaagggtatgt 20262356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 102
Target Start/End: Original strand, 20291392 - 20291475
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattag 102  Q
    ||||||||| |||||| | |||| |||||||||||| ||||||  ||||||||||||||||| | |||||| |||||||||||||    
T  20291392 ttaatattactaaattatcatttgtttgtatgtgtattaaatttgacttttcatatttcaag-ataagttagtagtattaattag 20291475  T

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Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 110
Target Start/End: Original strand, 25477277 - 25477368
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    |||||||||  ||||||| |||| |||||||||||| ||||||  ||||||||||||||||| | ||| || ||||||||||||| |||||||    
T  25477277 ttaatattacaaaattgtcatttgtttgtatgtgtattaaatttgacttttcatatttcaag-acaagatagtagtattaattaggggtatgt 25477368  T

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Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 110
Target Start/End: Original strand, 52226071 - 52226162
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    |||||||||| |||||||  ||| ||| |||||||| ||||||  ||||||||||||||||| | |||||| ||||||||||||| |||||||    
T  52226071 ttaatattatcaaattgtcctttgtttatatgtgtattaaatttgacttttcatatttcaag-acaagttagtagtattaattaggggtatgt 52226162  T

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Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 110
Target Start/End: Original strand, 52977608 - 52977699
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    |||||||||||||| | || |||||||||||||||||| ||||  |||| | ||||||||| || |||||| |||||||||||||| ||||||    
T  52977608 ttaatattattaaactattttttatttgtatgtgtacttaatttgacttcttatatttcaa-aataagttagtagtattaattagaagtatgt 52977699  T

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Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 18 - 116
Target Start/End: Original strand, 5168031 - 5168128
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgtgtagaa 116  Q
    ||||||||| |||||||| |||| |||||||||||| |||||| || ||||||||||||||  | ||| || ||||||||||||  ||||||| |||||    
T  5168031 ttaatattactaaattgtcatttgtttgtatgtgtattaaatttaatttttcatatttcaa-tacaagctagtagtattaattaagggtatgtttagaa 5168128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 38 - 104
Target Start/End: Complemental strand, 30153255 - 30153190
Alignment:
Q  38 tttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagag 104  Q
    |||||||||||||||| ||||||  ||||||||||||||||| | |||||| |||||||||||||||    
T  30153255 tttatttgtatgtgtattaaatttgacttttcatatttcaag-acaagttagtagtattaattagag 30153190  T

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Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 110
Target Start/End: Original strand, 34643447 - 34643537
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    ||||||||| ||||||||  ||| |||||||||||| |||||| || |||||||||||||||| ||| ||| ||||||||||||  |||||||    
T  34643447 ttaatattaataaattgtc-tttgtttgtatgtgtattaaatttaatttttcatatttcaagataaa-ttagtagtattaattaagggtatgt 34643537  T

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Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 110
Target Start/End: Original strand, 38136407 - 38136498
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    |||||||||| ||||||| |||| |||||||||||| | ||||  | |||||||||||||||   |||||| ||||||||||||| |||||||    
T  38136407 ttaatattatcaaattgtcatttgtttgtatgtgtaattaatttgatttttcatatttcaag-gcaagttagtagtattaattaggggtatgt 38136498  T

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Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 102
Target Start/End: Original strand, 41459639 - 41459722
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattag 102  Q
    ||||||||| ||||||||  ||||||| |||||||| ||||||  ||||||||||||||| | | |||||| |||||||||||||    
T  41459639 ttaatattactaaattgtcttttatttatatgtgtattaaatttgacttttcatatttcatg-acaagttagtagtattaattag 41459722  T

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Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 110
Target Start/End: Complemental strand, 41920091 - 41920000
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    |||||||||  |||||||  ||| |||||||||| | ||||||  ||||||||||||||||| | |||||| ||||||||||||| |||||||    
T  41920091 ttaatattaccaaattgtcttttgtttgtatgtgaaataaatttgacttttcatatttcaag-ataagttagtagtattaattaggggtatgt 41920000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 38 - 110
Target Start/End: Original strand, 54438582 - 54438653
Alignment:
Q  38 tttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    |||||||||||||||| ||||||  |||||||||||||||| || ||| || |||||||||||||||| ||||    
T  54438582 tttatttgtatgtgtattaaatttgacttttcatatttcaa-aacaagatagtagtattaattagaggcatgt 54438653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 42 - 110
Target Start/End: Complemental strand, 56217082 - 56217015
Alignment:
Q  42 tttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    ||||||| |||| |||||| |||||||||||||||||| | ||| || |||||||||||||||||||||    
T  56217082 tttgtatttgtattaaatttaacttttcatatttcaag-ataagatagtagtattaattagaggtatgt 56217015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 125 - 180
Target Start/End: Original strand, 7002345 - 7002400
Alignment:
Q  125 tacatctaatcatttgaaaagaggtttatatttaaagataattttttagtcaaatg 180  Q
    |||||||| | |||||||||||||||||||||||  || |||||||||||||||||    
T  7002345 tacatctagtaatttgaaaagaggtttatatttagggacaattttttagtcaaatg 7002400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 101
Target Start/End: Original strand, 29584946 - 29585028
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaatta 101  Q
    |||||||||  ||||||| |||| |||||||||||| ||||||  |||||| |||||| ||| | |||||||||||||||||||    
T  29584946 ttaatattaccaaattgtcatttgtttgtatgtgtattaaatttgactttttatattttaag-acaagttaatagtattaatta 29585028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 18 - 115
Target Start/End: Original strand, 20116502 - 20116599
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtatt-aattagaggtatgtgtaga 115  Q
    |||||||||  ||||||| |||| |||||||||||| ||||||  | ||||||||||||||| | ||| |||||||||| |||||| ||||||| ||||    
T  20116502 ttaatattaggaaattgtcatttgtttgtatgtgtattaaatttgatttttcatatttcaag-acaagataatagtattaaattaggggtatgtttaga 20116599  T

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Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 18 - 80
Target Start/End: Complemental strand, 26186808 - 26186746
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaaga 80  Q
    |||||||||| ||||||| |||| |||||||||||| ||||||  |||||| |||||||||||    
T  26186808 ttaatattatcaaattgtcatttgtttgtatgtgtattaaatttgactttttatatttcaaga 26186746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 18 - 116
Target Start/End: Original strand, 31840148 - 31840245
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgtgtagaa 116  Q
    |||||||||  ||||||| |||| |||||||||||| ||||||   ||||| ||||||||||| | | ||||||||||||||||| | ||||| |||||    
T  31840148 ttaatattaccaaattgtcatttgtttgtatgtgtattaaatttgtctttttatatttcaagacaga-ttaatagtattaattagggatatgtttagaa 31840245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 18 - 80
Target Start/End: Complemental strand, 31937445 - 31937383
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaaga 80  Q
    |||||||||||||||||| |||| ||||||||| ||  |||||  ||||||||||||||||||    
T  31937445 ttaatattattaaattgtcatttgtttgtatgtatataaaatttgacttttcatatttcaaga 31937383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 18 - 116
Target Start/End: Original strand, 32236883 - 32236980
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgtgtagaa 116  Q
    |||||||||| ||||| || ||| ||| |||||||| ||||||  |||||||||||||||| | ||| ||| || |||||||||| ||||||| |||||    
T  32236883 ttaatattatcaaattattctttgtttatatgtgtattaaatttgacttttcatatttcaatataaa-ttagtaatattaattaggggtatgtttagaa 32236980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 18 - 108
Target Start/End: Complemental strand, 44812660 - 44812571
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtat 108  Q
    |||||||||  ||||||| |||||||||| |||||| ||||||  |||||||||||||||| || ||  || ||||||||||||| |||||    
T  44812660 ttaatattacaaaattgtcatttatttgtgtgtgtattaaatttgacttttcatatttcaa-aacaaaatagtagtattaattaggggtat 44812571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 64 - 110
Target Start/End: Complemental strand, 45079820 - 45079774
Alignment:
Q  64 cttttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    ||||||||||||||||| ||||||||||||||||||||  |||||||    
T  45079820 cttttcatatttcaagataaagttaatagtattaattaagggtatgt 45079774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 37 - 102
Target Start/End: Original strand, 19654499 - 19654563
Alignment:
Q  37 atttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattag 102  Q
    ||||||||||||||||| |||||| | ||||||||||||||| || |||||| |||||||| ||||    
T  19654499 atttatttgtatgtgtattaaatttatcttttcatatttcaa-aacaagttagtagtattagttag 19654563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 27 - 80
Target Start/End: Complemental strand, 26170311 - 26170258
Alignment:
Q  27 ttaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaaga 80  Q
    ||||||||| |||||||||||| |||| ||||||  ||||||||||||||||||    
T  26170311 ttaaattgtcatttatttgtatatgtattaaatttgacttttcatatttcaaga 26170258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 37 - 102
Target Start/End: Original strand, 51787842 - 51787906
Alignment:
Q  37 atttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattag 102  Q
    |||| |||||||||||| ||||||  |||||||||||||||||| |||  ||||||||||||||||    
T  51787842 atttgtttgtatgtgtattaaatttgacttttcatatttcaagacaaa-ataatagtattaattag 51787906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 110
Target Start/End: Complemental strand, 52198782 - 52198690
Alignment:
Q  17 attaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    ||||||||||  ||||| |  |||||||||||||||| | ||||  |||||| ||||||||| || |||||| ||||||||||||| |||||||    
T  52198782 attaatattaccaaattatcttttatttgtatgtgtattgaatttgactttttatatttcaa-aacaagttagtagtattaattaggggtatgt 52198690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 101
Target Start/End: Original strand, 3094409 - 3094464
Alignment:
Q  45 gtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaatta 101  Q
    ||||||||| |||||| |||||||||||||||||| | || ||||||||||||||||    
T  3094409 gtatgtgtattaaatttaacttttcatatttcaag-acaacttaatagtattaatta 3094464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 100
Target Start/End: Complemental strand, 3684242 - 3684159
Alignment:
Q  17 attaatattattaaattgttatttatttgtatgtgtactaaattcaac-ttttcatatttcaagaaaaagttaatagtattaatt 100  Q
    ||||||||||||||||| | |||| ||| ||||| || |||||| ||| ||||||||||||||| | |||||| |||||||||||    
T  3684242 attaatattattaaattatcatttgtttatatgtatattaaatttaacgttttcatatttcaag-ataagttagtagtattaatt 3684159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 110
Target Start/End: Complemental strand, 39237642 - 39237551
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    |||||||||  |||||||  ||| |||||||||||| ||||||  |||||| |||||||||| | ||| ||||| |||||||||| |||||||    
T  39237642 ttaatattacgaaattgtcctttgtttgtatgtgtattaaatttgactttttatatttcaag-acaagataatattattaattaggggtatgt 39237551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 102
Target Start/End: Original strand, 54359759 - 54359818
Alignment:
Q  42 tttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattag 102  Q
    |||||||||||| |||||| |||||||||||||||||| | ||| || |||||||||||||    
T  54359759 tttgtatgtgtattaaatttaacttttcatatttcaag-acaagatagtagtattaattag 54359818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 80
Target Start/End: Original strand, 32107896 - 32107959
Alignment:
Q  17 attaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaaga 80  Q
    ||||||||||| |||||||  ||||||||||| |||| ||||||  ||||||||||||| ||||    
T  32107896 attaatattatcaaattgtcttttatttgtatatgtattaaatttgacttttcatattttaaga 32107959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 101
Target Start/End: Complemental strand, 37625178 - 37625096
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaatta 101  Q
    ||||||||| |||||| | |||| ||| |||||||| ||||||  ||||||||||||||||| |  ||||| ||||||||||||    
T  37625178 ttaatattactaaattatcatttgtttatatgtgtattaaatttgacttttcatatttcaag-attagttagtagtattaatta 37625096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 80
Target Start/End: Original strand, 24072819 - 24072881
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaaga 80  Q
    |||||||||| ||||||| ||||  ||| ||||||| ||||||  ||||||||||||||||||    
T  24072819 ttaatattatgaaattgtcatttgcttgaatgtgtattaaatttgacttttcatatttcaaga 24072881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 116
Target Start/End: Complemental strand, 33246526 - 33246453
Alignment:
Q  42 tttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgtgtagaa 116  Q
    |||||||||||| ||||||  ||||| ||||||||||| | |||||| |||||||||||||  |||||| |||||    
T  33246526 tttgtatgtgtattaaatttgactttacatatttcaag-acaagttagtagtattaattaggagtatgtttagaa 33246453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 80
Target Start/End: Complemental strand, 37175075 - 37175013
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaaga 80  Q
    |||||||||  |||||||  ||| |||||||||||| ||||||  ||||||||||||||||||    
T  37175075 ttaatattaccaaattgtcttttgtttgtatgtgtattaaattagacttttcatatttcaaga 37175013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 210
Target Start/End: Original strand, 39414408 - 39414481
Alignment:
Q  136 atttgaaaagaggtttatatttaaagataattttttagtcaaatgaatatttatatatagagacgggagggagta 210  Q
    |||||||||| ||||||||||||  || |||||||| ||||||||| |  |||||||||| ||| ||||||||||    
T  39414408 atttgaaaaggggtttatatttagggacaatttttttgtcaaatgagtggttatatatagggac-ggagggagta 39414481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 108
Target Start/End: Original strand, 43800860 - 43800949
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtat 108  Q
    |||||||||  |||||||  ||| |||||||||||| | ||||  ||||||||||||||||| | |||||  ||||||||||||| |||||    
T  43800860 ttaatattaccaaattgtcctttgtttgtatgtgtatttaatttgacttttcatatttcaag-acaagttggtagtattaattaggggtat 43800949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 116
Target Start/End: Complemental strand, 14602708 - 14602609
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatag--tattaattagaggtatgtgtaga 115  Q
    |||||||||  ||||||| |||| |||||||||||| ||||||  |||||| |||||| ||| | |||||| |||  |||||||||| ||||||| ||||    
T  14602708 ttaatattaccaaattgtcatttgtttgtatgtgtattaaatttgactttttatattttaag-ataagttagtagtatattaattaggggtatgtttaga 14602610  T

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Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 107
Target Start/End: Original strand, 21121019 - 21121107
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggta 107  Q
    |||||||||| ||| |||  ||| |||||||| ||| |||||| ||||||| |||||| |||| || |||| ||||||||||||| ||||    
T  21121019 ttaatattatcaaactgtcttttgtttgtatgcgtattaaatttaactttttatattttaagacaa-gttagtagtattaattaggggta 21121107  T

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Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 110
Target Start/End: Original strand, 39414288 - 39414377
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    |||||||||| ||||| |  ||| |||||||||||  ||||||  ||||||||||||||||| | |||||| | ||||||||||| |||||||    
T  39414288 ttaatattatcaaattatcttttgtttgtatgtgt--taaatttgacttttcatatttcaag-ataagttagtggtattaattaggggtatgt 39414377  T

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Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 110
Target Start/End: Original strand, 5448738 - 5448805
Alignment:
Q  42 tttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    |||||||||||| ||||||  ||||||||||||||||| | | |||| ||||||||||||  |||||||    
T  5448738 tttgtatgtgtattaaatttgacttttcatatttcaag-atatgttagtagtattaattatgggtatgt 5448805  T

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Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 180
Target Start/End: Original strand, 20016695 - 20016739
Alignment:
Q  136 atttgaaaagaggtttatatttaaagataattttttagtcaaatg 180  Q
    ||||||||||||||||||||||||  | || ||||||||||||||    
T  20016695 atttgaaaagaggtttatatttaataacaaatttttagtcaaatg 20016739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 110
Target Start/End: Complemental strand, 20185685 - 20185618
Alignment:
Q  42 tttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    ||||||| |||| ||||||  |||||||||||||||||| ||| ||| ||||||||||||  |||||||    
T  20185685 tttgtatttgtattaaatttgacttttcatatttcaagacaaa-ttagtagtattaattaagggtatgt 20185618  T

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Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 102
Target Start/End: Complemental strand, 39197087 - 39197004
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattag 102  Q
    |||||||||| |||||||  ||| |||||||||||| ||||||  |||||||| |||| || || |||||| || ||||||||||    
T  39197087 ttaatattatcaaattgtcttttgtttgtatgtgtattaaatttgacttttcaaattttaa-aacaagttagtattattaattag 39197004  T

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Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 101
Target Start/End: Complemental strand, 45628128 - 45628046
Alignment:
Q  17 attaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaatta 101  Q
    ||||||||||  ||||||   ||||||| |||||||| ||||||  ||||||||||||||||| | ||||||||| |||||||||    
T  45628128 attaatattaccaaattgccctttattt-tatgtgtattaaatttgacttttcatatttcaag-acaagttaataatattaatta 45628046  T

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Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 110
Target Start/End: Complemental strand, 48472524 - 48472457
Alignment:
Q  42 tttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    ||||||||||||  |||||  |||||| ||||||||||| || | |||||||||||||||| |||||||    
T  48472524 tttgtatgtgtatgaaatttgactttttatatttcaagacaa-gataatagtattaattaggggtatgt 48472457  T

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Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 110
Target Start/End: Complemental strand, 52552540 - 52552473
Alignment:
Q  42 tttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    |||||| |||||  |||||  |||||||||||||||||| || |||| ||||||||||||| |||||||    
T  52552540 tttgtacgtgtataaaatttgacttttcatatttcaagataa-gttagtagtattaattaggggtatgt 52552473  T

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Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 80
Target Start/End: Complemental strand, 52768950 - 52768890
Alignment:
Q  20 aatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaaga 80  Q
    |||||||  ||||||| ||||||||||||||||| ||||||  ||||| || |||||||||    
T  52768950 aatattacaaaattgtcatttatttgtatgtgtattaaatttgactttacagatttcaaga 52768890  T

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Target: chr1 (Bit Score: 48; Significance: 1e-18; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 18 - 116
Target Start/End: Original strand, 3072190 - 3072285
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgtgtagaa 116  Q
    ||||||||||||||||||| ||| |||  ||||||| ||||||  |||||||||||||||||| || |||| ||||||||||||||||||||| |||||    
T  3072190 ttaatattattaaattgtttttttttt--atgtgtattaaatttgacttttcatatttcaagacaa-gttagtagtattaattagaggtatgtttagaa 3072285  T

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Target: chr1; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 18 - 102
Target Start/End: Complemental strand, 8984713 - 8984630
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattag 102  Q
    ||||||||| |||||||| |||| |||||||||||| ||||||  |||||||||||||||||| ||| ||| |||||||||||||    
T  8984713 ttaatattactaaattgtcatttgtttgtatgtgtattaaatttgacttttcatatttcaagataaa-ttagtagtattaattag 8984630  T

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Target: chr1; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 18 - 110
Target Start/End: Original strand, 32152209 - 32152300
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    |||||||||  |||||||||||| |||||||||||| ||||||  ||||||||||||| ||| | |||||| ||||||||||||| |||||||    
T  32152209 ttaatattaccaaattgttatttgtttgtatgtgtattaaatttgacttttcatattttaag-ataagttagtagtattaattaggggtatgt 32152300  T

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Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 116
Target Start/End: Complemental strand, 35366036 - 35365939
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgtgtagaa 116  Q
    |||||||||| |||||||  ||| |||||||||||| ||||||  ||||||||||||| ||| | ||||||| ||||||||||| |||||||| |||||    
T  35366036 ttaatattatcaaattgtcttttgtttgtatgtgtattaaatttgacttttcatattttaag-acaagttaacagtattaattaaaggtatgtttagaa 35365939  T

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Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 38 - 110
Target Start/End: Original strand, 36085041 - 36085112
Alignment:
Q  38 tttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    |||||||||||||||| |||||| ||||||||||||||| || | ||| |||||||||||||||| |||||||    
T  36085041 tttatttgtatgtgtattaaatttaacttttcatatttcgag-acaagataatagtattaattaggggtatgt 36085112  T

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Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 110
Target Start/End: Complemental strand, 44652913 - 44652822
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    |||||||||  | |||||| ||| |||||||||||| ||||||  |||||||||||||||| || |||||| ||||||||||||| |||||||    
T  44652913 ttaatattaccacattgttctttgtttgtatgtgtattaaatttgacttttcatatttcaa-aacaagttagtagtattaattaggggtatgt 44652822  T

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Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 110
Target Start/End: Complemental strand, 47071013 - 47070922
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    |||||||||  ||||||| |||| |||||||| ||| ||||||  | ||||||||||||||| | |||||| |||||||||||||||||||||    
T  47071013 ttaatattaccaaattgtcatttgtttgtatgcgtattaaatttgatttttcatatttcaag-acaagttagtagtattaattagaggtatgt 47070922  T

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Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 18 - 101
Target Start/End: Original strand, 46495360 - 46495443
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaatta 101  Q
    |||||||||| |||||||  ||||||||||||| || ||||||  |||||||| |||||||  | |||||||||||||||||||    
T  46495360 ttaatattatcaaattgtcctttatttgtatgtatattaaatttgacttttcaaatttcaaagacaagttaatagtattaatta 46495443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 37 - 110
Target Start/End: Complemental strand, 46732993 - 46732921
Alignment:
Q  37 atttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    ||||||||||||||||| ||||||  |||||||||||||||||| ||| ||| ||||| ||||||| |||||||    
T  46732993 atttatttgtatgtgtattaaatttgacttttcatatttcaagacaaa-ttagtagtaataattaggggtatgt 46732921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 102
Target Start/End: Complemental strand, 291687 - 291604
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattag 102  Q
    ||||||||| |||||||| |||| ||||||| |||| |||||| ||||||| |||||| |||| || |||| |||||||||||||    
T  291687 ttaatattactaaattgtcatttgtttgtatttgtattaaatttaactttttatattttaagataa-gttagtagtattaattag 291604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 17 - 101
Target Start/End: Complemental strand, 4817959 - 4817876
Alignment:
Q  17 attaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaatta 101  Q
    ||||||||||| |||||||  ||| |||||||||||| ||||||  |||||||| |||||||| | |||||| ||||||||||||    
T  4817959 attaatattatcaaattgtcttttgtttgtatgtgtattaaatttgacttttcaaatttcaag-acaagttagtagtattaatta 4817876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 17 - 101
Target Start/End: Complemental strand, 4829759 - 4829676
Alignment:
Q  17 attaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaatta 101  Q
    ||||||||||| |||||||  ||| |||||||||||| ||||||  |||||||| |||||||| | |||||| ||||||||||||    
T  4829759 attaatattatcaaattgtcttttgtttgtatgtgtattaaatttgacttttcaaatttcaag-acaagttagtagtattaatta 4829676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 110
Target Start/End: Complemental strand, 5085141 - 5085050
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    |||||||||  |||||||  ||| |||||||||||| ||||||  ||||||||||||||||| | ||| || ||||||||||||| |||||||    
T  5085141 ttaatattacgaaattgtcttttgtttgtatgtgtattaaatttgacttttcatatttcaag-agaagatagtagtattaattaggggtatgt 5085050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 110
Target Start/End: Original strand, 8877823 - 8877914
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    |||||||||  ||||||| |||| |||||||||||| ||||||  |||||| |||||||||| | ||| || ||||||||||||| |||||||    
T  8877823 ttaatattacgaaattgtcatttgtttgtatgtgtattaaatttgactttttatatttcaag-ataagatagtagtattaattaggggtatgt 8877914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 110
Target Start/End: Complemental strand, 9675719 - 9675628
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    |||||||||  |||||||  |||||||||||||||| ||||||  ||| |||||||||||| || ||| ||||| |||||||||| |||||||    
T  9675719 ttaatattacgaaattgtcctttatttgtatgtgtattaaatttgactattcatatttcaa-aataagataataatattaattaggggtatgt 9675628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 110
Target Start/End: Original strand, 20564826 - 20564917
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    |||||||||  |||||||  ||| |||| ||||||| ||||||  ||||||||||||||||| | |||||| |||||||||||||| ||||||    
T  20564826 ttaatattacaaaattgtcttttgtttgaatgtgtattaaatttgacttttcatatttcaag-acaagttagtagtattaattagatgtatgt 20564917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 102
Target Start/End: Complemental strand, 23982644 - 23982561
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattag 102  Q
    |||||||||| ||||||  |||| ||||||| |||| ||||||  ||||||||||||||||| | |||||| |||||||||||||    
T  23982644 ttaatattatcaaattgacatttgtttgtatatgtattaaatttgacttttcatatttcaag-ataagttagtagtattaattag 23982561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 29140707 - 29140608
Alignment:
Q  17 attaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgtgtagaa 116  Q
    ||||||||||  |||||||  ||| |||||||||||| ||||||  ||||||||||||||||| | ||| || | ||||||||||| ||||||| |||||    
T  29140707 attaatattacaaaattgtcctttgtttgtatgtgtattaaatttgacttttcatatttcaag-acaagatagtggtattaattaggggtatgtttagaa 29140609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 110
Target Start/End: Complemental strand, 48721920 - 48721829
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    |||||||||  |||||||  ||| |||||||||||| ||||||  ||||||||||||||||| | ||| || ||||||||||||| |||||||    
T  48721920 ttaatattacgaaattgtcctttgtttgtatgtgtattaaatttgacttttcatatttcaag-acaagatagtagtattaattaggggtatgt 48721829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 127 - 201
Target Start/End: Complemental strand, 4813400 - 4813326
Alignment:
Q  127 catctaatcatttgaaaagaggtttatatttaaagataattttttagtcaaatgaatatttatatatagagacgg 201  Q
    |||||| | |||||||||| ||||||||||||  || ||||||||||||||||| ||  |||||||||| |||||    
T  4813400 catctagtaatttgaaaaggggtttatatttagggacaattttttagtcaaatggatggttatatatagggacgg 4813326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 18 - 80
Target Start/End: Original strand, 16582584 - 16582646
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaaga 80  Q
    |||||||||  |||||||  |||||||||||||||| ||||||  ||||||||||||||||||    
T  16582584 ttaatattacgaaattgtcttttatttgtatgtgtattaaatttgacttttcatatttcaaga 16582646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 18 - 108
Target Start/End: Complemental strand, 28679873 - 28679785
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtat 108  Q
    ||||||||||||||||||| ||| |||||||||||| ||||||  | |||| |||||||||| | |||||  ||||||||||||| |||||    
T  28679873 ttaatattattaaattgtt-tttgtttgtatgtgtattaaatttgatttttaatatttcaag-ataagtttttagtattaattaggggtat 28679785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 110
Target Start/End: Complemental strand, 51390578 - 51390498
Alignment:
Q  29 aaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    ||||||| |||| |||||||||||| ||||||  ||||||||||||||||| | |||||| |||| |||||||  |||||||    
T  51390578 aaattgtcatttgtttgtatgtgtattaaatttgacttttcatatttcaag-acaagttagtagttttaattaagggtatgt 51390498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 110
Target Start/End: Original strand, 3143454 - 3143545
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    |||||||||  |||||||  ||| ||| |||||||| ||||||  ||||||||||||||||| | ||| || ||||||||||||| |||||||    
T  3143454 ttaatattacaaaattgtcttttgtttttatgtgtattaaatttgacttttcatatttcaag-acaagatagtagtattaattaggggtatgt 3143545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 50 - 110
Target Start/End: Complemental strand, 9380781 - 9380721
Alignment:
Q  50 tgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    |||| |||||| || |||||||||||||||| ||||||| |||| ||||||| ||||||||    
T  9380781 tgtattaaatttaaattttcatatttcaagataaagttagtagtcttaattaaaggtatgt 9380721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 102
Target Start/End: Original strand, 10160763 - 10160846
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattag 102  Q
    |||||||||| ||||  | |||| |||||||||||| ||||||  ||||||||||||||||| | ||  ||||||||||||||||    
T  10160763 ttaatattatgaaatattcatttgtttgtatgtgtattaaatttgacttttcatatttcaag-ataatataatagtattaattag 10160846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 110
Target Start/End: Complemental strand, 15512833 - 15512742
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    ||||||||| ||||||||  ||| |||||||||||| ||||||  ||||||  |||||||||| ||| ||| ||| ||||||||| |||||||    
T  15512833 ttaatattactaaattgtcctttgtttgtatgtgtattaaatttgactttttgtatttcaagacaaa-ttagtaggattaattaggggtatgt 15512742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 110
Target Start/End: Complemental strand, 28949016 - 28948925
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    ||||||||| ||||||||  ||| |||||||||||| ||||||  ||||||  |||||||||| ||| ||| ||| ||||||||| |||||||    
T  28949016 ttaatattactaaattgtcctttgtttgtatgtgtattaaatttgactttttgtatttcaagacaaa-ttagtaggattaattaggggtatgt 28948925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 102
Target Start/End: Original strand, 32144362 - 32144445
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattag 102  Q
    |||||||||  ||||||| |||| ||||||||||||  |||||  ||||||||||||| ||| | ||||||||| ||||||||||    
T  32144362 ttaatattaccaaattgtcatttgtttgtatgtgtataaaatttgacttttcatattttaag-acaagttaataatattaattag 32144445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 110
Target Start/End: Original strand, 47643591 - 47643682
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    ||||||||| ||||||||  ||| |||| ||||||| ||||||  |||||||| ||||||||| || |||| ||||||||||||  |||||||    
T  47643591 ttaatattactaaattgtcctttgtttgcatgtgtattaaatttgacttttcaaatttcaagacaa-gttagtagtattaattaagggtatgt 47643682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 47754694 - 47754634
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaa 78  Q
    |||||||||  ||||||| |||| |||||||||||| ||||||  ||||||||||||||||    
T  47754694 ttaatattaccaaattgtcatttgtttgtatgtgtattaaatttgacttttcatatttcaa 47754634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 15457866 - 15457784
Alignment:
Q  19 taatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattag 102  Q
    ||||||||| ||||||| |||| |||||||||||| ||||||  | |||||||||||| |||| || ||| || ||||||||||    
T  15457866 taatattatcaaattgtcatttgtttgtatgtgtattaaatttgatttttcatatttc-agaacaaattagtaatattaattag 15457784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 80
Target Start/End: Original strand, 24415051 - 24415113
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaaga 80  Q
    |||||||||  ||||| | |||| |||||||||||| ||||||  ||||||||||||||||||    
T  24415051 ttaatattaccaaattatcatttgtttgtatgtgtattaaatttgacttttcatatttcaaga 24415113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 80
Target Start/End: Original strand, 34102387 - 34102449
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaaga 80  Q
    |||||||||| ||||| || ||| ||||||||| || ||||||  ||||||||||||||||||    
T  34102387 ttaatattatcaaattattctttgtttgtatgtttattaaatttgacttttcatatttcaaga 34102449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 110
Target Start/End: Complemental strand, 5322064 - 5321984
Alignment:
Q  29 aaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    |||||||||||| ||||||| |||| |||| |  ||||||||||||||||| | ||| || ||||||||| ||| |||||||    
T  5322064 aaattgttatttgtttgtatatgtattaaaattgacttttcatatttcaag-acaagatagtagtattaactaggggtatgt 5321984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 31305370 - 31305431
Alignment:
Q  19 taatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaaga 80  Q
    ||||||||  |||||||  ||| |||||||||||| ||||||  ||||||||||||||||||    
T  31305370 taatattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcatatttcaaga 31305431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 102
Target Start/End: Original strand, 2342955 - 2343038
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattag 102  Q
    |||||||||  |||||||  ||| ||||| |||||| ||||||  |||||||||||||||||   |||||| |||||||||||||    
T  2342955 ttaatattaccaaattgtcttttgtttgtgtgtgtattaaatttgacttttcatatttcaag-gcaagttagtagtattaattag 2343038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 110
Target Start/End: Original strand, 13145469 - 13145560
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    |||||||||  |||||||  ||| |||||||||| | ||||||  ||||||||||||| ||| | |||||| || |||||||||| |||||||    
T  13145469 ttaatattaccaaattgtcctttgtttgtatgtgcattaaatttgacttttcatattttaag-ataagttagtaatattaattaggggtatgt 13145560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 101
Target Start/End: Original strand, 13352885 - 13352966
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaatta 101  Q
    |||||||||  ||||||| |||||||||||||| |  || |||   ||||||||||||| ||| ||||||| ||||||||||||    
T  13352885 ttaatattagcaaattgtcatttatttgtatgtat--tatatttgccttttcatatttcgagacaaagttagtagtattaatta 13352966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 110
Target Start/End: Original strand, 25063285 - 25063352
Alignment:
Q  42 tttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    |||||||||||| ||||||  ||||||||||||||| | | |||||| ||| ||||||||| |||||||    
T  25063285 tttgtatgtgtattaaatttcacttttcatatttcacg-acaagttagtaggattaattaggggtatgt 25063352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 110
Target Start/End: Original strand, 33231891 - 33231982
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    |||||||||  |||||||  ||| |||||||||||| |||||   ||||||||||||||||| | ||| || | ||||||||||| |||||||    
T  33231891 ttaatattacgaaattgtcctttgtttgtatgtgtattaaatctgacttttcatatttcaag-acaagatagtggtattaattaggggtatgt 33231982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 110
Target Start/End: Original strand, 34012566 - 34012629
Alignment:
Q  46 tatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    |||||||| |||||| |||||||||||||||||| | ||| || ||||||||||||  |||||||    
T  34012566 tatgtgtattaaatttaacttttcatatttcaag-acaagatagtagtattaattaagggtatgt 34012629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 38680526 - 38680586
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaa 78  Q
    |||||||||| ||||||| |||| |||||||||||| ||||||   |||| ||||||||||    
T  38680526 ttaatattatcaaattgtcatttgtttgtatgtgtattaaatttgtctttgcatatttcaa 38680586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 47; Significance: 6e-18; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 2409964 - 2409875
Alignment:
Q  20 aatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    ||||||| ||| ||||  ||||||||||||| || ||||||   ||||||||||||||||||||| |||||||||||||||||||||||||    
T  2409964 aatattactaagttgtcctttatttgtatgtatattaaatttgtcttttcatatttcaagaaaaa-ttaatagtattaattagaggtatgt 2409875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 18 - 110
Target Start/End: Original strand, 1324760 - 1324851
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    ||||| |||| ||||||| |||| |||||||||||| ||||||  ||||||||||||||||| | |||||| ||||||||||||| |||||||    
T  1324760 ttaatcttatcaaattgtcatttgtttgtatgtgtattaaatttgacttttcatatttcaag-acaagttagtagtattaattaggggtatgt 1324851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 18 - 102
Target Start/End: Complemental strand, 21801109 - 21801026
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattag 102  Q
    ||||||||| |||||||| ||||||||||||||||| ||||||  |||||| ||||||||| || || |||||||||||||||||    
T  21801109 ttaatattactaaattgtcatttatttgtatgtgtattaaatttgactttttatatttcaa-aataaattaatagtattaattag 21801026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 18 - 110
Target Start/End: Complemental strand, 21809700 - 21809609
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    ||||||||| ||||||||  ||| |||||||||||| ||||||  |||||||||||||||| || |||||| ||||||||||||| |||||||    
T  21809700 ttaatattactaaattgtcctttgtttgtatgtgtattaaatttgacttttcatatttcaa-aacaagttagtagtattaattaggggtatgt 21809609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 17 - 108
Target Start/End: Complemental strand, 26201022 - 26200932
Alignment:
Q  17 attaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtat 108  Q
    ||||||||||| ||||| || ||| |||||||||||| |||||| |||||||||||||| || || |||||| |||||||||||||| ||||    
T  26201022 attaatattatcaaattattctttgtttgtatgtgtattaaatttaacttttcatattttaa-aacaagttagtagtattaattagaagtat 26200932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 29 - 110
Target Start/End: Complemental strand, 27162946 - 27162865
Alignment:
Q  29 aaattgttatttatttgtatgtgtactaaattcaactttt-catatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    ||||||| |||| |||||||||||| |||||| ||||||| |||||||||||| || ||||||||||||||||||| ||||||    
T  27162946 aaattgtcatttgtttgtatgtgtattaaatttaactttttcatatttcaagacaa-gttaatagtattaattagaagtatgt 27162865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 102
Target Start/End: Complemental strand, 6376186 - 6376102
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattag 102  Q
    ||||||||| |||||||| |||| |||||||||||| |||||| ||||||||| |||| |||| ||  |||||| ||||||||||    
T  6376186 ttaatattactaaattgtcatttgtttgtatgtgtattaaatttaacttttcaaattttaagacaagtttaatattattaattag 6376102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 110
Target Start/End: Original strand, 28663807 - 28663898
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    |||||||||| ||||| |||||| ||||||||| || ||||||  |||| ||||||||||||| ||| ||| ||||||||||||| |||||||    
T  28663807 ttaatattatcaaattattatttgtttgtatgtatattaaatttgacttctcatatttcaagataaa-ttagtagtattaattaggggtatgt 28663898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 110
Target Start/End: Complemental strand, 42983667 - 42983576
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    ||||||||||||||||||  | | |||||||||||| ||||||  ||||||||||||||||| | |||||| ||||||||||||  |||||||    
T  42983667 ttaatattattaaattgtcttatgtttgtatgtgtattaaatttgacttttcatatttcaag-acaagttagtagtattaattaatggtatgt 42983576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 18 - 108
Target Start/End: Original strand, 36116373 - 36116462
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtat 108  Q
    |||||||||  ||||||| |||| |||||||||||| ||||||  |||||| |||||||||| | ||| ||||| ||||||||||||||||    
T  36116373 ttaatattacgaaattgtcatttgtttgtatgtgtattaaatttgactttttatatttcaag-acaagataataatattaattagaggtat 36116462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 110
Target Start/End: Complemental strand, 19236120 - 19236029
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    |||||||||  | |||||| ||| |||||||||||| ||||||  | ||||||||||||||| | |||||| ||||||||||||| |||||||    
T  19236120 ttaatattaccatattgttctttgtttgtatgtgtattaaatttgatttttcatatttcaag-acaagttagtagtattaattaggggtatgt 19236029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 110
Target Start/End: Original strand, 23876089 - 23876180
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    ||||||||| ||||||||  ||| |||||||||||| |||||| |||||||| |||||||||| ||| ||| ||  ||||||||| |||||||    
T  23876089 ttaatattactaaattgtcttttgtttgtatgtgtattaaatttaacttttcgtatttcaagacaaa-ttagtatgattaattagtggtatgt 23876180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 110
Target Start/End: Original strand, 35128436 - 35128527
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    |||||||||| |||||||  ||| |||||||||||| ||||||  | ||||||||||||||| | ||| | |||||||||||||| |||||||    
T  35128436 ttaatattatgaaattgtcctttgtttgtatgtgtattaaatttgaattttcatatttcaag-acaagatgatagtattaattaggggtatgt 35128527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 102
Target Start/End: Original strand, 37673789 - 37673872
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattag 102  Q
    |||||||||| |||||||  ||| |||||||||||| ||||||  ||||||||||||||||| | ||| ||||| ||||||||||    
T  37673789 ttaatattatgaaattgtcttttgtttgtatgtgtattaaatttgacttttcatatttcaag-acaagataataatattaattag 37673872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 102
Target Start/End: Original strand, 40263763 - 40263846
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattag 102  Q
    |||||||||  ||||||| |||| |||||||||||| ||||||  ||||||||||||||||| | ||| || |||||||||||||    
T  40263763 ttaatattacaaaattgtcatttgtttgtatgtgtattaaatttgacttttcatatttcaag-ataagatagtagtattaattag 40263846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 110
Target Start/End: Original strand, 49100723 - 49100814
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    |||||||||  |||||||  ||| |||||||||||| ||||||  |||||||||||||||||| |||  ||||| |||||||||| |||||||    
T  49100723 ttaatattacgaaattgtcctttgtttgtatgtgtattaaatttgacttttcatatttcaagataaa-ataataatattaattaggggtatgt 49100814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 117
Target Start/End: Original strand, 25750420 - 25750518
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgtgtagaag 117  Q
    |||||||||  ||||||| |||| |||||||||||| ||||||  | ||||||||||||||| | ||| || || |||||||||| ||||||| ||||||    
T  25750420 ttaatattacaaaattgtcatttgtttgtatgtgtattaaatttgatttttcatatttcaag-acaaggtagtaatattaattaggggtatgtttagaag 25750518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 18 - 80
Target Start/End: Complemental strand, 31373751 - 31373689
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaaga 80  Q
    ||||||||| ||||||||  ||| |||||||||||| ||||||  ||||||||||||||||||    
T  31373751 ttaatattactaaattgtcctttgtttgtatgtgtattaaatttgacttttcatatttcaaga 31373689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 136 - 210
Target Start/End: Original strand, 37136356 - 37136429
Alignment:
Q  136 atttgaaaagaggtttatatttaaagataattttttagtcaaatgaatatttatatatagagacgggagggagta 210  Q
    |||||||||||||||||||||||  || |||||||| |||||||| ||  |||||||||| ||| ||||||||||    
T  37136356 atttgaaaagaggtttatatttagggacaatttttttgtcaaatggatggttatatatagggac-ggagggagta 37136429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 18 - 104
Target Start/End: Complemental strand, 46783894 - 46783809
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagag 104  Q
    |||||||||  |||||||  ||| || ||||||||| ||||||  ||||||||||||||||| | |||||| |||||||||||||||    
T  46783894 ttaatattaccaaattgtcttttgttcgtatgtgtattaaatttgacttttcatatttcaag-ataagttagtagtattaattagag 46783809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 33181346 - 33181430
Alignment:
Q  17 attaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattag 102  Q
    ||||||||||  ||||||| |||| |||||||||||| |||||| ||||||||||| || ||| | |||||| || ||||||||||    
T  33181346 attaatattaccaaattgtcatttgtttgtatgtgtattaaatttaacttttcatactttaag-acaagttagtaatattaattag 33181430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 110
Target Start/End: Complemental strand, 2276630 - 2276539
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    |||||||||  |||||||  ||| |||||||||||| ||||||  |||||||| |||||||| | |||||| ||||||||||||  |||||||    
T  2276630 ttaatattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaag-ataagttactagtattaattaagggtatgt 2276539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 110
Target Start/End: Complemental strand, 18122095 - 18122004
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    ||||||||| |||||| |  ||| |||| |||||||  |||||  ||||||||||||||||| | |||||| |||||||||||||| ||||||    
T  18122095 ttaatattactaaattttcctttgtttgaatgtgtataaaatttgacttttcatatttcaag-ataagttagtagtattaattagacgtatgt 18122004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 110
Target Start/End: Original strand, 21388294 - 21388385
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    ||||||||| ||||||||  ||| |||||||||||| ||||||  |||||||| |||| ||| | |||||| ||||||||||||  |||||||    
T  21388294 ttaatattactaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaattttaag-ataagttagtagtattaattaatggtatgt 21388385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 110
Target Start/End: Original strand, 48767641 - 48767708
Alignment:
Q  42 tttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    |||||||||||| ||||||  ||||||||||||||||| | | |||| ||||||||||||| |||||||    
T  48767641 tttgtatgtgtattaaatttgacttttcatatttcaag-acatgttattagtattaattaggggtatgt 48767708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 102
Target Start/End: Complemental strand, 13907791 - 13907713
Alignment:
Q  23 attattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattag 102  Q
    ||||| ||||||| |||| ||||||||| || ||||||  ||||||||||||| ||| | |||||| |||||||||||||    
T  13907791 attatcaaattgtcatttgtttgtatgtttaataaatttgacttttcatatttaaag-acaagttagtagtattaattag 13907713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 101
Target Start/End: Original strand, 20123502 - 20123585
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaatta 101  Q
    |||||||||| |||||||  ||| |||||||||||| ||||||  | |||||| |||||||  | |||||| ||||||||||||    
T  20123502 ttaatattatcaaattgtcctttgtttgtatgtgtattaaatttgaattttcaaatttcaaagacaagttattagtattaatta 20123585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 101
Target Start/End: Complemental strand, 24700749 - 24700667
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaatta 101  Q
    |||||||||  |||||||| ||| |||||||||||| |||  |  |||||||||||||||| || |||||| ||||||||||||    
T  24700749 ttaatattaccaaattgttctttgtttgtatgtgtattaatgttgacttttcatatttcaa-aataagttagtagtattaatta 24700667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 116
Target Start/End: Original strand, 37048098 - 37048183
Alignment:
Q  29 aaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgtgtagaa 116  Q
    |||||||  ||| |||||||||||| |||||| |||| ||||||||||||  | |||||| ||||||||||||| ||||||| |||||    
T  37048098 aaattgtcctttgtttgtatgtgtattaaatttaactattcatatttcaa-tacaagttagtagtattaattag-ggtatgtttagaa 37048183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 80
Target Start/End: Complemental strand, 48610190 - 48610127
Alignment:
Q  17 attaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaaga 80  Q
    ||||||||||  |||||||  ||| |||||||||||| ||||||  ||||||||||||||||||    
T  48610190 attaatattacgaaattgtcttttgtttgtatgtgtattaaatttgacttttcatatttcaaga 48610127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 80
Target Start/End: Original strand, 10685137 - 10685199
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaaga 80  Q
    |||||||||  |||||||  ||| |||||||||||| ||||||  ||||||||||||||||||    
T  10685137 ttaatattacgaaattgtcctttgtttgtatgtgtattaaatttgacttttcatatttcaaga 10685199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 101
Target Start/End: Original strand, 27170064 - 27170145
Alignment:
Q  19 taatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaatta 101  Q
    ||||||||  ||||||| |||| ||  ||||| || ||||||  |||||||||||||||||| ||| ||||||||||||||||    
T  27170064 taatattaccaaattgtgatttgttcatatgtctattaaatttgacttttcatatttcaagacaaa-ttaatagtattaatta 27170145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 172
Target Start/End: Complemental strand, 24700643 - 24700598
Alignment:
Q  127 catctaatcatttgaaaagaggtttatatttaaagataatttttta 172  Q
    |||||||| ||||||||||||||||||||| ||||| || ||||||    
T  24700643 catctaataatttgaaaagaggtttatattaaaagacaaattttta 24700598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 110
Target Start/End: Complemental strand, 4089529 - 4089462
Alignment:
Q  42 tttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    ||||||| |||| ||||||  ||||||||||||||||| | ||| || ||||||||||||| |||||||    
T  4089529 tttgtatatgtattaaatttgacttttcatatttcaag-acaagatagtagtattaattaggggtatgt 4089462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 97
Target Start/End: Original strand, 21752580 - 21752657
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtatta 97  Q
    |||||||||  ||||| | |||| |||||||||||| ||||||  |||||||| ||||||  ||| ||||||||||||||    
T  21752580 ttaatattaccaaattatcatttgtttgtatgtgtattaaatttgacttttcacatttca--aaacagttaatagtatta 21752657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 102
Target Start/End: Original strand, 27213539 - 27213622
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattag 102  Q
    ||||||||| ||||||||  ||| ||||||||| || |||| |  || |||||||||||||| | |||||||||||||| |||||    
T  27213539 ttaatattactaaattgtcctttgtttgtatgtctattaaaattgacatttcatatttcaag-acaagttaatagtatttattag 27213622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 180
Target Start/End: Complemental strand, 42993118 - 42993074
Alignment:
Q  136 atttgaaaagaggtttatatttaaagataattttttagtcaaatg 180  Q
    ||||||||| || ||||||||||  ||||||||||||||||||||    
T  42993118 atttgaaaaaagatttatatttatggataattttttagtcaaatg 42993074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 46; Significance: 2e-17; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 17 - 110
Target Start/End: Original strand, 50363077 - 50363169
Alignment:
Q  17 attaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    ||||||||||  ||||||| |||| |||||||||||| ||||||  ||||||||||||||||| | |||||| ||||||||||||| |||||||    
T  50363077 attaatattaccaaattgtcatttgtttgtatgtgtattaaatttgacttttcatatttcaag-acaagttagtagtattaattaggggtatgt 50363169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 18 - 110
Target Start/End: Complemental strand, 26517270 - 26517179
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    |||||||||  |||||||  |||||||||||||||| ||||||  ||||||||||||||||| | |||||| ||||||||||||| |||||||    
T  26517270 ttaatattaccaaattgtcctttatttgtatgtgtattaaatttgacttttcatatttcaag-acaagttagtagtattaattaggggtatgt 26517179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 110
Target Start/End: Original strand, 33287917 - 33288008
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    ||||||||||||||||||  ||| ||||| |||||| ||||||  |||||| |||||||||| | |||||| |||||||||||||| ||||||    
T  33287917 ttaatattattaaattgtcctttgtttgtttgtgtattaaatttgactttttatatttcaag-acaagttagtagtattaattagatgtatgt 33288008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 18 - 116
Target Start/End: Complemental strand, 14645944 - 14645847
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgtgtagaa 116  Q
    |||||||||  |||||||||||| |||||||||||| ||||||  | |||||| |||||||| | |||||| ||||||||| ||| ||||||| |||||    
T  14645944 ttaatattaccaaattgttatttgtttgtatgtgtattaaatttgatttttcaaatttcaag-acaagttagtagtattaactaggggtatgtttagaa 14645847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 18 - 80
Target Start/End: Original strand, 26243523 - 26243585
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaaga 80  Q
    ||||| |||||||||||| |||| |||||||||||| ||||||  ||||||||||||||||||    
T  26243523 ttaatgttattaaattgtcatttgtttgtatgtgtattaaatttgacttttcatatttcaaga 26243585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 110
Target Start/End: Complemental strand, 12077798 - 12077707
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    |||||||||  ||||||| |||| |||||||||||| ||||||  |||||||||||||||| || ||| ||  |||||||||||| |||||||    
T  12077798 ttaatattacaaaattgtcatttgtttgtatgtgtattaaatttgacttttcatatttcaa-aacaagatagaagtattaattaggggtatgt 12077707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 110
Target Start/End: Original strand, 31474475 - 31474566
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    |||||||||||||||| | |||| |||||||||||| |||||| |  |||||| |||| |||| ||| ||| ||||||||||||| |||||||    
T  31474475 ttaatattattaaattatcatttgtttgtatgtgtattaaatttagtttttcaaattttaagacaaa-ttagtagtattaattaggggtatgt 31474566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 101
Target Start/End: Complemental strand, 48901572 - 48901490
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaatta 101  Q
    ||||||||| |||||||| |||| ||||||| | || ||||||  |||||| |||||| |||||||| ||||||||||||||||    
T  48901572 ttaatattactaaattgtcatttgtttgtatatatattaaatttgacttttaatattttaagaaaaa-ttaatagtattaatta 48901490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 101
Target Start/End: Complemental strand, 48903138 - 48903056
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaatta 101  Q
    ||||||||| |||||||| |||| ||||||| | || ||||||  |||||| ||||||||||||||| ||| ||||||||||||    
T  48903138 ttaatattactaaattgtcatttgtttgtatatatattaaatttgacttttaatatttcaagaaaaa-ttagtagtattaatta 48903056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 18 - 80
Target Start/End: Complemental strand, 41727293 - 41727231
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaaga 80  Q
    |||||||||  |||||||  |||||||||||||||| ||||||  ||||||||||||||||||    
T  41727293 ttaatattacaaaattgtcctttatttgtatgtgtattaaatttgacttttcatatttcaaga 41727231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 116
Target Start/End: Original strand, 11388172 - 11388271
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatag--tattaattagaggtatgtgtaga 115  Q
    |||||||||  |||||||  ||| |||||||||||| ||||||  ||||||||||||||||| | |||||| |||  |||||||||| ||||||| ||||    
T  11388172 ttaatattaccaaattgtattttgtttgtatgtgtattaaatttgacttttcatatttcaag-ataagttagtagtatattaattaggggtatgtttaga 11388270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 41543661 - 41543600
Alignment:
Q  19 taatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaaga 80  Q
    ||||||||| |||||||  |||||||||||||||| ||||||  || |||||||||||||||    
T  41543661 taatattataaaattgtcttttatttgtatgtgtattaaatttgacatttcatatttcaaga 41543600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 110
Target Start/End: Complemental strand, 5504606 - 5504539
Alignment:
Q  42 tttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    |||||||||||| ||||||  ||||||||||||||||| | ||| || ||||||||||||| |||||||    
T  5504606 tttgtatgtgtattaaatttgacttttcatatttcaag-acaagatagtagtattaattaggggtatgt 5504539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 110
Target Start/End: Complemental strand, 27638132 - 27638041
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    |||||||||| |||||||  ||| |||||||||||| ||||||  || |||||||||||||| | ||| || | ||||||||||| |||||||    
T  27638132 ttaatattataaaattgtcctttgtttgtatgtgtattaaatttgacatttcatatttcaag-acaagatagtggtattaattaggggtatgt 27638041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 110
Target Start/End: Original strand, 30476092 - 30476183
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    |||||||||  |||||||  ||| ||||||||| || ||||||  ||||||||||||||||| | ||| || ||||||||||||| |||||||    
T  30476092 ttaatattacgaaattgtcctttgtttgtatgtctattaaatttgacttttcatatttcaag-agaagatagtagtattaattaggggtatgt 30476183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 110
Target Start/End: Original strand, 31819457 - 31819548
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    |||||||||  |||||||  ||| |||||||||||| ||||||  ||||||||||||||||| | ||  || ||||||||||||| |||||||    
T  31819457 ttaatattacgaaattgtcctttgtttgtatgtgtattaaatttgacttttcatatttcaag-acaatatagtagtattaattaggggtatgt 31819548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 110
Target Start/End: Original strand, 44083678 - 44083769
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    |||||||||  ||||| | |||| |||||||||||| ||||||  ||||||||||||||||| | |||||| |  |||||||||| |||||||    
T  44083678 ttaatattaccaaattatcatttgtttgtatgtgtattaaatttgacttttcatatttcaag-ataagttagtgatattaattaggggtatgt 44083769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 110
Target Start/End: Original strand, 48309519 - 48309586
Alignment:
Q  42 tttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    |||||||||||  ||||||  ||||||||||||||||| | |||||| ||||||||||||| |||||||    
T  48309519 tttgtatgtgtgttaaatttgacttttcatatttcaag-ataagttagtagtattaattaggggtatgt 48309586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 110
Target Start/End: Original strand, 48581389 - 48581460
Alignment:
Q  38 tttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    ||||||| |||||||| ||||||  | |||||||||||| ||| || |||||||||| |||||||||||||||    
T  48581389 tttatttttatgtgtattaaatttgatttttcatatttccagacaa-gttaatagtactaattagaggtatgt 48581460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 110
Target Start/End: Original strand, 51263137 - 51263224
Alignment:
Q  22 tattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    ||||| ||||||||  ||| |||||||||||| ||||||  ||||||||||||| ||| | |||||| |||||||||||| | ||||||    
T  51263137 tattactaaattgtcctttgtttgtatgtgtattaaatttgacttttcatatttaaag-ataagttagtagtattaattaaaagtatgt 51263224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 42 - 101
Target Start/End: Original strand, 22659655 - 22659713
Alignment:
Q  42 tttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaatta 101  Q
    |||||||||||| |||||| ||||||||||||||||| || || ||| ||||||||||||    
T  22659655 tttgtatgtgtattaaatttaacttttcatatttcaa-aacaaattagtagtattaatta 22659713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 116
Target Start/End: Original strand, 28229215 - 28229313
Alignment:
Q  17 attaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgtgtagaa 116  Q
    ||||||||||  |||||||  ||||||||||||| || ||||||  |||||| |||||| ||| | |||||| ||||||||||||  ||||||| |||||    
T  28229215 attaatattaccaaattgtcctttatttgtatgtatattaaatttgacttttaatattttaag-acaagttagtagtattaattatgggtatgtttagaa 28229313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 63 - 110
Target Start/End: Original strand, 29349474 - 29349520
Alignment:
Q  63 acttttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    |||||||||||||||||| || |||| |||||||||||||||||||||    
T  29349474 acttttcatatttcaagataa-gttagtagtattaattagaggtatgt 29349520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 80
Target Start/End: Original strand, 46048572 - 46048635
Alignment:
Q  17 attaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaaga 80  Q
    ||||||||||  |||||||  ||| |||||||||||| ||||||  ||||||||||||||||||    
T  46048572 attaatattacgaaattgtcctttgtttgtatgtgtattaaatttgacttttcatatttcaaga 46048635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 76
Target Start/End: Original strand, 12236334 - 12236392
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttc 76  Q
    |||||||||| |||||||| ||||||||||| |||| ||||| | |||||| |||||||    
T  12236334 ttaatattatcaaattgttctttatttgtatttgtattaaatacgacttttaatatttc 12236392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 102
Target Start/End: Original strand, 26043081 - 26043152
Alignment:
Q  29 aaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattag 102  Q
    |||||||  ||| |||||||||||| ||||||  |||||||||||||||||| ||  ||| |||||||||||||    
T  26043081 aaattgtcctttgtttgtatgtgtattaaatttgacttttcatatttcaagataa--ttagtagtattaattag 26043152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 80
Target Start/End: Original strand, 26121383 - 26121445
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaaga 80  Q
    |||||||||| |||||||  ||| |||||||||||| |||| |  ||||||||||||||||||    
T  26121383 ttaatattatcaaattgtcctttgtttgtatgtgtattaaacttgacttttcatatttcaaga 26121445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 108
Target Start/End: Original strand, 28477436 - 28477525
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtat 108  Q
    |||||||||  |||||||  ||| |||||||||| | ||||||  ||| |||||||||||||| ||| ||| ||||||||||||| |||||    
T  28477436 ttaatattaccaaattgtcttttgtttgtatgtgcattaaatttgactattcatatttcaagacaaa-ttagtagtattaattaggggtat 28477525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 29645409 - 29645475
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaa 84  Q
    |||||||||  ||||||| |||| |||||||||||| ||||||  ||||||||||||| | ||||||    
T  29645409 ttaatattacgaaattgtcatttgtttgtatgtgtattaaatttgacttttcatattttaggaaaaa 29645475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 80
Target Start/End: Complemental strand, 39617305 - 39617243
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaaga 80  Q
    |||||||||  |||||||  ||| |||||||||||| ||||||  ||||||||||||||||||    
T  39617305 ttaatattacgaaattgtcctttgtttgtatgtgtattaaatttgacttttcatatttcaaga 39617243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 192
Target Start/End: Original strand, 48214375 - 48214417
Alignment:
Q  150 ttatatttaaagataattttttagtcaaatgaatatttatata 192  Q
    ||||||||| |||||||||||||||||||||| || |||||||    
T  48214375 ttatatttagagataattttttagtcaaatgagtagttatata 48214417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 47 - 116
Target Start/End: Complemental strand, 35765670 - 35765602
Alignment:
Q  47 atgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgtgtagaa 116  Q
    ||||||| ||||||  |||||||| ||||||| || |||||| |||||||||||| |||||||| |||||    
T  35765670 atgtgtattaaatttgacttttcaaatttcaa-aacaagttagtagtattaattataggtatgtttagaa 35765602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 110
Target Start/End: Original strand, 2421135 - 2421226
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    |||||||||  ||||||| |||| ||||||||| || ||||||  |||||| |||||  |||| || |||| |||||||| ||||||||||||    
T  2421135 ttaatattacaaaattgtcatttgtttgtatgtatattaaatttgactttttatattcaaagacaa-gttagtagtattagttagaggtatgt 2421226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 11396887 - 11396939
Alignment:
Q  127 catctaatcatttgaaaagaggtttatatttaaagataattttttagtcaaat 179  Q
    |||||||| ||||||||||  ||||| |||||| ||||| |||||||||||||    
T  11396887 catctaataatttgaaaaggagtttacatttaaggataaatttttagtcaaat 11396939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 102
Target Start/End: Complemental strand, 20945331 - 20945272
Alignment:
Q  42 tttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattag 102  Q
    |||||||||||| ||||||  ||||||||||||| ||| | |||||| |||||||||||||    
T  20945331 tttgtatgtgtattaaatttgacttttcatattttaag-acaagttagtagtattaattag 20945272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 110
Target Start/End: Original strand, 21933001 - 21933068
Alignment:
Q  42 tttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    |||||||||||  ||||||  ||||||||||||||||| | |||||||  ||||||||||| |||||||    
T  21933001 tttgtatgtgtgttaaatttgacttttcatatttcaag-ataagttaaccgtattaattaggggtatgt 21933068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 110
Target Start/End: Complemental strand, 29676794 - 29676703
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    |||||||||  |||||||  |||||||||||||||| ||||||   | |||||||||||||| | ||| || | ||||||||||| |||||||    
T  29676794 ttaatattacgaaattgtcttttatttgtatgtgtattaaatttggcatttcatatttcaag-acaagatagtggtattaattaggggtatgt 29676703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 110
Target Start/End: Original strand, 35055837 - 35055928
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    |||||||||  ||||||| ||||  ||||||||||| ||||||  |||||| |||||||||  | |||||| ||||||||||||  |||||||    
T  35055837 ttaatattaccaaattgtcatttgcttgtatgtgtattaaatttgactttttatatttcaa-tacaagttagtagtattaattatgggtatgt 35055928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 80
Target Start/End: Original strand, 39931938 - 39931994
Alignment:
Q  24 ttattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaaga 80  Q
    |||||||||||| |||| |||||||||||| ||||||  | ||||||||||| ||||    
T  39931938 ttattaaattgtcatttgtttgtatgtgtattaaattttagttttcatattttaaga 39931994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 110
Target Start/End: Original strand, 40645725 - 40645816
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    |||||||||  |||||||  ||| |||||||||||| |||| |    |||||||||||||||| || |||| ||||||||||||| |||||||    
T  40645725 ttaatattaccaaattgtcttttgtttgtatgtgtattaaacttggtttttcatatttcaagacaa-gttattagtattaattaggggtatgt 40645816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 110
Target Start/End: Complemental strand, 41308803 - 41308740
Alignment:
Q  46 tatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    |||||||| ||||||   ||||||||||||||||| || |||| ||||||||||||| |||||||    
T  41308803 tatgtgtattaaatttggcttttcatatttcaagacaa-gttagtagtattaattaggggtatgt 41308740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 110
Target Start/End: Original strand, 42010919 - 42011010
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    |||||||||| ||||| || ||| ||||||||| |  ||||||  |||||||||||||||||| ||| |||  |||||||||||  |||||||    
T  42010919 ttaatattatcaaattattctttgtttgtatgtatgttaaatttgacttttcatatttcaagataaa-ttagcagtattaattatgggtatgt 42011010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 110
Target Start/End: Original strand, 44338132 - 44338223
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    |||||||||  |||||||  ||| ||| |||||||| ||||||  |||||| |||||||||| | |||||| || |||||||||| |||||||    
T  44338132 ttaatattaccaaattgtcctttgtttctatgtgtattaaatttgactttttatatttcaag-ataagttagtactattaattaggggtatgt 44338223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 110
Target Start/End: Complemental strand, 50525031 - 50524940
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    |||||||||  |||||||  ||| |||||||||||| ||||||  |||||| | |||||||| | |||||| |||| |||||||| |||||||    
T  50525031 ttaatattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttgaaatttcaag-acaagttagtagttttaattaggggtatgt 50524940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 45; Significance: 9e-17; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 18 - 110
Target Start/End: Complemental strand, 57242 - 57151
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    |||||||||  |||||||| |||||||||||||||| ||||||  ||||||||||||||||| | ||| |||||||||||||||  |||||||    
T  57242 ttaatattacgaaattgttctttatttgtatgtgtattaaatttgacttttcatatttcaag-acaagataatagtattaattaagggtatgt 57151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 18 - 110
Target Start/End: Complemental strand, 23399831 - 23399740
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    ||||||||| ||||||||  ||| |||||||||||| ||||||  |||||||||||||||| |  |||||| |||||||||||||||||||||    
T  23399831 ttaatattactaaattgtcctttgtttgtatgtgtattaaatttgacttttcatatttcaa-accaagttagtagtattaattagaggtatgt 23399740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 18 - 110
Target Start/End: Complemental strand, 43191531 - 43191440
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    ||||||||| |||||||| |||| |||||||||||| |||||| || ||||||||||||||| | |||||| ||| ||||||||| |||||||    
T  43191531 ttaatattactaaattgtcatttgtttgtatgtgtattaaatttaaattttcatatttcaag-ataagttagtaggattaattaggggtatgt 43191440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 117
Target Start/End: Complemental strand, 38761412 - 38761314
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgtgtagaag 117  Q
    |||||||||| ||||||| |||| |||||||||||| ||||||  ||||||||||||||||| | ||| || ||||||||||||| | ||||| ||||||    
T  38761412 ttaatattatgaaattgtcatttgtttgtatgtgtattaaatttgacttttcatatttcaag-acaagatagtagtattaattagggatatgtttagaag 38761314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 110
Target Start/End: Complemental strand, 24512221 - 24512130
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    |||||||||| |||||||  ||| |||||||||||| ||||||  |||||||||||||||||| |||  || ||||||||||||| |||||||    
T  24512221 ttaatattatcaaattgtcttttgtttgtatgtgtattaaatttgacttttcatatttcaagataaa-atagtagtattaattaggggtatgt 24512130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 18 - 108
Target Start/End: Original strand, 12762894 - 12762983
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtat 108  Q
    ||||||||| ||||||||  ||| |||||||||||| ||||||  ||||||||||||||||| | |||||| || |||||||||| |||||    
T  12762894 ttaatattactaaattgtcctttgtttgtatgtgtattaaatttgacttttcatatttcaag-acaagttagtaatattaattaggggtat 12762983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 110
Target Start/End: Complemental strand, 1177211 - 1177119
Alignment:
Q  17 attaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    ||||||||||  |||||||  |||||||||||||||| ||||||  | |||||||||||||| || ||| || ||||||||||||| |||||||    
T  1177211 attaatattacgaaattgtcttttatttgtatgtgtattaaatttgatttttcatatttcaa-aacaagatagtagtattaattaggggtatgt 1177119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 110
Target Start/End: Complemental strand, 3113587 - 3113496
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    |||||||||| |||||||  ||| ||| |||||||| |||||| || ||||||||||||||| | ||||| |||||||||||||  |||||||    
T  3113587 ttaatattatcaaattgtcttttgtttatatgtgtattaaatttaatttttcatatttcaag-ataagtttatagtattaattaatggtatgt 3113496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 110
Target Start/End: Complemental strand, 24276611 - 24276520
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    |||||||||  ||||||| |||| |||||||||||| ||||||  ||||| |||||||||| || |||||| || |||||||||| |||||||    
T  24276611 ttaatattaccaaattgtcatttgtttgtatgtgtattaaattttactttacatatttcaa-aacaagttagtaatattaattaggggtatgt 24276520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 110
Target Start/End: Complemental strand, 24962419 - 24962328
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    ||||||||| ||||||||  ||| |||||||||||| |||||| |||||||  |||||||||| ||| ||| ||| ||||||||| |||||||    
T  24962419 ttaatattactaaattgtcctttgtttgtatgtgtattaaatttaactttttgtatttcaagacaaa-ttagtaggattaattaggggtatgt 24962328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 110
Target Start/End: Original strand, 25185082 - 25185173
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    |||||||||  ||||||| |||| |||||||||||| ||||||   |||||||||||||||| | ||| || ||||||||||||| |||||||    
T  25185082 ttaatattacgaaattgtcatttgtttgtatgtgtattaaatttgtcttttcatatttcaag-ataagatagtagtattaattaggggtatgt 25185173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 110
Target Start/End: Original strand, 25198341 - 25198432
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    |||||||||  |||||||  ||| ||||||||||||  |||||  ||||||||||||||||| | |||||| ||||||||||||| |||||||    
T  25198341 ttaatattaccaaattgtcctttgtttgtatgtgtataaaatttgacttttcatatttcaag-ataagttagtagtattaattaggggtatgt 25198432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 110
Target Start/End: Complemental strand, 31746459 - 31746368
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    |||||||||  ||||||| |||| |||||||||||| ||||||  |||||||||||||||| |  |||||| || |||||||||| |||||||    
T  31746459 ttaatattacaaaattgtcatttgtttgtatgtgtattaaatttgacttttcatatttcaa-agcaagttagtattattaattaggggtatgt 31746368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 102
Target Start/End: Complemental strand, 36309650 - 36309567
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattag 102  Q
    |||||||||| ||||||| |||| |||||||||||| ||||||  ||||||||||||| ||| | |||||| || ||||||||||    
T  36309650 ttaatattatcaaattgtcatttgtttgtatgtgtattaaatttgacttttcatattttaag-acaagttagtattattaattag 36309567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 18 - 80
Target Start/End: Original strand, 7772564 - 7772626
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaaga 80  Q
    |||||||||  |||||||  |||||||||||||||| ||||||  ||||||||||||||||||    
T  7772564 ttaatattacgaaattgtcctttatttgtatgtgtattaaatttcacttttcatatttcaaga 7772626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 18 - 116
Target Start/End: Complemental strand, 30262592 - 30262495
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgtgtagaa 116  Q
    |||||||||  ||||||| |||| |||||||||||  |||||  ||||||||| |||||||| | |||||| ||||||||||||| || |||| |||||    
T  30262592 ttaatattaccaaattgtcatttgtttgtatgtgtcttaaatctaacttttcaaatttcaag-acaagttagtagtattaattaggggcatgtttagaa 30262495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 17 - 75
Target Start/End: Original strand, 35794793 - 35794851
Alignment:
Q  17 attaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatattt 75  Q
    ||||||||||| ||||||| |||| |||||||||||| ||||||  |||||||||||||    
T  35794793 attaatattatcaaattgtcatttgtttgtatgtgtattaaatttgacttttcatattt 35794851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 12998745 - 12998651
Alignment:
Q  20 aatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaaga----aaaagttaatagtattaattagaggtatgt 110  Q
    ||||||| ||||||||  ||| |||||||||||| ||||||  || |||||||||||||||    | |||||| ||||||||||||| |||||||    
T  12998745 aatattactaaattgtcctttgtttgtatgtgtattaaatttgacctttcatatttcaagacaagacaagttagtagtattaattaggggtatgt 12998651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 110
Target Start/End: Original strand, 36437564 - 36437644
Alignment:
Q  29 aaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    |||||||  ||| |||||||||||| ||||||  ||||||||||||||||| | |||||| |||||||| |||| |||||||    
T  36437564 aaattgtcctttgtttgtatgtgtattaaatttgacttttcatatttcaag-acaagttagtagtattagttaggggtatgt 36437644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 110
Target Start/End: Original strand, 2031268 - 2031359
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    ||||||| || |||||||  ||| || |||| |||| ||||||  | |||||||||||||||| ||| ||| |||||||||||||||||||||    
T  2031268 ttaatataatcaaattgtcctttgttcgtatatgtattaaattatatttttcatatttcaagataaa-ttagtagtattaattagaggtatgt 2031359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 102
Target Start/End: Complemental strand, 10396284 - 10396201
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattag 102  Q
    |||||||||  ||||||| |||| |||||||||||| ||||||  ||||||| ||||||||| | ||| ||||| ||||||||||    
T  10396284 ttaatattacgaaattgtcatttgtttgtatgtgtattaaatttgacttttcgtatttcaag-acaagataataatattaattag 10396201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 102
Target Start/End: Complemental strand, 14577706 - 14577623
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattag 102  Q
    |||||||||  |||||||  ||| |||||||||||| ||||||  | ||||||||||||||| | |||||| |||||||||||||    
T  14577706 ttaatattaccaaattgtactttgtttgtatgtgtattaaatttgatttttcatatttcaag-acaagttagtagtattaattag 14577623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 110
Target Start/End: Complemental strand, 26878782 - 26878691
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    |||||||||  |||||||  ||| ||||||||| || ||||||  ||||| ||||||||||| | |||||| ||||||||||||| |||||||    
T  26878782 ttaatattaccaaattgtcctttgtttgtatgtatattaaatttgactttacatatttcaag-ataagttagtagtattaattaggggtatgt 26878691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 110
Target Start/End: Original strand, 40517792 - 40517883
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    |||||||||  |||||||  ||| |||||||||||| ||||||  |||||| | |||||||| | |||||| ||||||||||||| |||||||    
T  40517792 ttaatattaccaaattgtcctttgtttgtatgtgtattaaatttgactttttaaatttcaag-acaagttagtagtattaattaggggtatgt 40517883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 110
Target Start/End: Complemental strand, 43980637 - 43980546
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    ||||||||| |||||| | |||| |||||||||||| ||||||  ||||||  |||||||||| ||| ||| ||| ||||||||| |||||||    
T  43980637 ttaatattactaaattatcatttgtttgtatgtgtattaaatttgactttttgtatttcaagataaa-ttagtaggattaattaggggtatgt 43980546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 110
Target Start/End: Original strand, 45203834 - 45203901
Alignment:
Q  42 tttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    |||||||| ||| ||||||  ||||||||||||||||| | |||||| ||||||||||||| |||||||    
T  45203834 tttgtatgcgtattaaatttgacttttcatatttcaag-acaagttagtagtattaattaggggtatgt 45203901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 101
Target Start/End: Original strand, 885513 - 885595
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaatta 101  Q
    |||||||||| |||||||  ||| |||||||||||| ||||||  |||||||| ||||||||| ||| ||| | ||||||||||    
T  885513 ttaatattatcaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaagacaaa-ttagtggtattaatta 885595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 101
Target Start/End: Original strand, 7172271 - 7172353
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaatta 101  Q
    |||||||||| ||||||| |||| |||||||||| | |||| |  ||||||||||||||||| | |||||| ||||||| ||||    
T  7172271 ttaatattataaaattgtcatttgtttgtatgtgcattaaaattgacttttcatatttcaag-ataagttagtagtatttatta 7172353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 101
Target Start/End: Original strand, 41087026 - 41087108
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaatta 101  Q
    |||||||||| ||||| |  ||| |||||||||||| ||||||  | ||||||||||||||| | |||||| ||||||||||||    
T  41087026 ttaatattatcaaattttcctttgtttgtatgtgtattaaatttgatttttcatatttcaag-acaagttagtagtattaatta 41087108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 181
Target Start/End: Complemental strand, 12894141 - 12894087
Alignment:
Q  127 catctaatcatttgaaaagaggtttatatttaaagataattttttagtcaaatga 181  Q
    |||||| | |||||||||||| |||||||||| ||| || |||||||||||||||    
T  12894141 catctactaatttgaaaagagatttatatttagagacaaatttttagtcaaatga 12894087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 80
Target Start/End: Complemental strand, 38203046 - 38202984
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaaga 80  Q
    |||||||||  ||||||| |||| |||||||||||| ||||||  | ||||||||||||||||    
T  38203046 ttaatattacgaaattgtcatttgtttgtatgtgtattaaatttgatttttcatatttcaaga 38202984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 80
Target Start/End: Complemental strand, 38770241 - 38770179
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaaga 80  Q
    |||||||||  ||||||| |||| |||||||||||| ||| ||  ||||||||||||||||||    
T  38770241 ttaatattacgaaattgtcatttgtttgtatgtgtattaattttgacttttcatatttcaaga 38770179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 107
Target Start/End: Original strand, 23280703 - 23280791
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggta 107  Q
    ||||||||| ||||||||  ||| ||||||||| || ||||||  | |||||||||| ||||  || |||| ||||||||||||||||||    
T  23280703 ttaatattactaaattgtcctttgtttgtatgtttattaaatttgatttttcatattacaagccaa-gttagtagtattaattagaggta 23280791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 79
Target Start/End: Original strand, 37141778 - 37141839
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaag 79  Q
    |||||||||  ||||||| |||| |||||||||||| ||||||  ||||||| |||||||||    
T  37141778 ttaatattacgaaattgtcatttgtttgtatgtgtattaaatttgacttttcgtatttcaag 37141839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 102
Target Start/End: Original strand, 25888647 - 25888730
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattag 102  Q
    |||||||||| | ||||| |||| |||||||||||| ||||||  | ||||||||||| |||| ||| ||| || ||||||||||    
T  25888647 ttaatattatcatattgtcatttgtttgtatgtgtattaaatttgatttttcatattttaagacaaa-ttagtactattaattag 25888730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 110
Target Start/End: Complemental strand, 40337245 - 40337154
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    |||||||||  |||||||  ||| |||||||||||| | || |  ||||||||||||||||| | ||| |||||||||||||||  |||||||    
T  40337245 ttaatattacaaaattgtcctttgtttgtatgtgtatttaaattgacttttcatatttcaag-acaagataatagtattaattaagggtatgt 40337154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 108
Target Start/End: Complemental strand, 25017726 - 25017637
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtat 108  Q
    |||||||||  ||||||| |||| |||||||||||| ||||||  ||||||||||||| ||| | |||||||||||||||||||| |||||    
T  25017726 ttaatattaccaaattgtcatttgtttgtatgtgtattaaatttgacttttcatattttaag-acaagttaatagtattaattaggggtat 25017637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 5845227 - 5845311
Alignment:
Q  17 attaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattag 102  Q
    ||||||||||| ||||||| |||| |||||||||||| ||||||  ||||||||||||||||  | |||||| |||||||||||||    
T  5845227 attaatattatcaaattgtcatttgtttgtatgtgtattaaatttgacttttcatatttcaa-tacaagttagtagtattaattag 5845311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 17 - 110
Target Start/End: Complemental strand, 35569058 - 35568966
Alignment:
Q  17 attaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    |||||||||| |||||| || ||| |||||||||||| ||||||  |||||||||||||||||| ||| ||| ||||| ||||||| |||||||    
T  35569058 attaatattactaaattattctttgtttgtatgtgtattaaatttgacttttcatatttcaagacaaa-ttagtagtactaattaggggtatgt 35568966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 102
Target Start/End: Complemental strand, 4857546 - 4857463
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattag 102  Q
    ||||||||| |||||||| |||| |||||||||||| ||||||  ||||||||||||| ||| | |||||| |||||||||||||    
T  4857546 ttaatattactaaattgtcatttgtttgtatgtgtattaaatttgacttttcatattttaag-ataagttagtagtattaattag 4857463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 102
Target Start/End: Original strand, 20946139 - 20946222
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattag 102  Q
    |||||||||| ||||||| |||| |||||||||||| ||||||  |||||||||||||||| || |||||| ||||| |||||||    
T  20946139 ttaatattatcaaattgtcatttgtttgtatgtgtattaaatttgacttttcatatttcaa-aacaagttagtagtactaattag 20946222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 42 - 110
Target Start/End: Original strand, 29866265 - 29866332
Alignment:
Q  42 tttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    |||||||||||| ||||||  ||||||||||||||||| | |||||| ||||||||||||| |||||||    
T  29866265 tttgtatgtgtattaaatttgacttttcatatttcaag-acaagttagtagtattaattaggggtatgt 29866332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 41521240 - 41521300
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaa 78  Q
    |||||||||||||||||| |||| ||| |||||||| ||||||  ||||||||||||||||    
T  41521240 ttaatattattaaattgtcatttgtttatatgtgtattaaatttgacttttcatatttcaa 41521300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 18 - 108
Target Start/End: Complemental strand, 3247326 - 3247237
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtat 108  Q
    |||||||||  |||||||  ||| |||||||||||| ||||||  ||||||||||||||||| ||||| |  ||||||||||||| |||||    
T  3247326 ttaatattacgaaattgtcctttgtttgtatgtgtattaaatttgacttttcatatttcaag-aaaagattgtagtattaattaggggtat 3247237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 18 - 116
Target Start/End: Original strand, 16969426 - 16969523
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgtgtagaa 116  Q
    |||||||||| ||| ||||||||||||||||||||  ||||||  | |||| |||||| ||| | || ||| || |||||||||||||||||| |||||    
T  16969426 ttaatattatcaaactgttatttatttgtatgtgtgttaaatttgaattttaatattttaag-acaatttagtaatattaattagaggtatgtttagaa 16969523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 18 - 108
Target Start/End: Original strand, 27798208 - 27798297
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtat 108  Q
    |||||||||| ||||| | |||| |||||||||||| ||| ||  ||||||||||||||||| | |||||| | ||||||||||| |||||    
T  27798208 ttaatattatcaaattatcatttgtttgtatgtgtattaagtttgacttttcatatttcaag-acaagttattggtattaattaggggtat 27798297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 116
Target Start/End: Original strand, 556054 - 556150
Alignment:
Q  19 taatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgtgtagaa 116  Q
    |||||||| |||||||| |||| | ||||| |||| ||||||  |||||||||||||||||| ||| |||||  |||||||||| | ||||| |||||    
T  556054 taatattactaaattgtcatttttctgtatatgtattaaatttgacttttcatatttcaagacaaa-ttaatgatattaattagtgctatgtttagaa 556150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 102
Target Start/End: Complemental strand, 5151253 - 5151169
Alignment:
Q  17 attaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattag 102  Q
    ||||||||||  |||||||  ||||||||| |||||| ||||||  ||||||||||||||||| | |||||| ||||| |||||||    
T  5151253 attaatattaccaaattgtcctttatttgtgtgtgtattaaatttgacttttcatatttcaag-acaagttagtagtactaattag 5151169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 115
Target Start/End: Complemental strand, 10523326 - 10523230
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgtgtaga 115  Q
    |||||||||  |||||||| ||| ||| |||||||| ||||||  ||| || |||||||||| | |||||| ||||||||||||| ||||||| ||||    
T  10523326 ttaatattaccaaattgttttttgtttttatgtgtattaaatttgactatttatatttcaag-acaagttagtagtattaattaggggtatgtttaga 10523230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 127 - 180
Target Start/End: Original strand, 10656754 - 10656807
Alignment:
Q  127 catctaatcatttgaaaagaggtttatatttaaagataattttttagtcaaatg 180  Q
    |||||||| |||||| |||  | |||||||||||||||||||||||||||||||    
T  10656754 catctaataatttgagaaggagattatatttaaagataattttttagtcaaatg 10656807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 110
Target Start/End: Original strand, 16496487 - 16496579
Alignment:
Q  17 attaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    ||||||||||  ||||| |  ||| ||||||||| || ||||||  ||||||||||||||||| | ||||||||||||||| ||| ||||||||    
T  16496487 attaatattaccaaattatcctttgtttgtatgtatattaaatttgacttttcatatttcaag-ataagttaatagtattagttaaaggtatgt 16496579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 136 - 201
Target Start/End: Original strand, 34676296 - 34676361
Alignment:
Q  136 atttgaaaagaggtttatatttaaagataattttttagtcaaatgaatatttatatatagagacgg 201  Q
    ||||||||||  |||||||||||  || ||||||||||||||||| ||  ||||||||||||||||    
T  34676296 atttgaaaaggagtttatatttagggacaattttttagtcaaatggatggttatatatagagacgg 34676361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 110
Target Start/End: Complemental strand, 40979265 - 40979173
Alignment:
Q  17 attaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    ||||||||||  |||||||  ||| |||||||||||| ||||||  ||||||||||||| ||| | ||| || ||||||||||||| |||||||    
T  40979265 attaatattacgaaattgtcctttgtttgtatgtgtattaaatttgacttttcatatttaaag-acaagatagtagtattaattaggggtatgt 40979173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 110
Target Start/End: Complemental strand, 3559079 - 3558988
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    |||||||||  |||||||  ||| |||||||||||| ||||||  ||||||||||||||||| | |||||| ||||||| ||||  |||||||    
T  3559079 ttaatattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcatatttcaag-ataagttagtagtatttattaagggtatgt 3558988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 110
Target Start/End: Original strand, 4738682 - 4738773
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    ||||||||| |||||||   ||| ||| |||||||| ||||||  ||||||||||||||||| | |||||| |||||||| |||| |||||||    
T  4738682 ttaatattactaaattgacctttgtttttatgtgtattaaatttgacttttcatatttcaag-acaagttagtagtattagttaggggtatgt 4738773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 110
Target Start/End: Original strand, 18729668 - 18729735
Alignment:
Q  42 tttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    |||||||||||| ||||||  |||||||||||||||| |  || ||||||||||||||||| |||||||    
T  18729668 tttgtatgtgtattaaatttgacttttcatatttcaa-attaaattaatagtattaattaggggtatgt 18729735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 110
Target Start/End: Original strand, 21912172 - 21912263
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    ||||||||||||||||||  ||| |||||||||||| ||| ||  ||||||  |||||||||| ||| ||| ||| ||||||||| |||||||    
T  21912172 ttaatattattaaattgtcttttgtttgtatgtgtattaagtttgactttttgtatttcaagacaaa-ttagtaggattaattaggggtatgt 21912263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 36177344 - 36177404
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaa 78  Q
    |||||||||  ||||||| |||| |||||||||||| ||||||  ||||||||||||||||    
T  36177344 ttaatattacaaaattgtcatttgtttgtatgtgtattaaatttgacttttcatatttcaa 36177404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 110
Target Start/End: Complemental strand, 38972179 - 38972088
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    |||||||||  |||||||  ||| |||||||||||| ||||||  |||||| |||||||||| | |||||| ||||||||||||  |||||||    
T  38972179 ttaatattaccaaattgtcctttgtttgtatgtgtattaaatttgactttttatatttcaag-ataagttagtagtattaattaagggtatgt 38972088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 110
Target Start/End: Complemental strand, 39690538 - 39690447
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    ||||||||| ||||||||  ||| |||||||||||| ||||||  ||||||  |||||||||| ||| ||| ||| ||||||||| |||||||    
T  39690538 ttaatattactaaattgtcctttgtttgtatgtgtattaaatttgactttttgtatttcaagacaaa-ttagtaggattaattaggggtatgt 39690447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 55 - 110
Target Start/End: Complemental strand, 5764238 - 5764184
Alignment:
Q  55 taaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    |||||| |||||||||||||||| || || ||||||| ||||||||||||||||||    
T  5764238 taaatttaacttttcatatttcacgacaa-gttaataatattaattagaggtatgt 5764184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 110
Target Start/End: Complemental strand, 42644529 - 42644439
Alignment:
Q  19 taatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    ||||||||| ||||||| |||| ||||||||| || ||||||   |||||||||||||||| | |||||| | ||||||||||  |||||||    
T  42644529 taatattatcaaattgtcatttgtttgtatgtatattaaatttgtcttttcatatttcaag-acaagttagttgtattaattaagggtatgt 42644439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 75
Target Start/End: Complemental strand, 19089074 - 19089016
Alignment:
Q  17 attaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatattt 75  Q
    |||||||||| |||||||| |||| ||||||| |||| ||||||  |||||||||||||    
T  19089074 attaatattactaaattgtcatttgtttgtatttgtattaaatttgacttttcatattt 19089016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 110
Target Start/End: Complemental strand, 8718000 - 8717920
Alignment:
Q  29 aaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    ||||||| |||| ||||||| |||| ||||||  ||||||||||||||||| | |||||  || |||||||||| |||||||    
T  8718000 aaattgtcatttgtttgtatatgtattaaatttgacttttcatatttcaag-acaagttcgtattattaattaggggtatgt 8717920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 110
Target Start/End: Complemental strand, 9946411 - 9946319
Alignment:
Q  17 attaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    ||||||||||  ||||| |  ||| |||||| ||||| ||||||| |||||| |||||||||| | ||| || ||||||||||||| |||||||    
T  9946411 attaatattacgaaattatcctttgtttgtacgtgtattaaattcgactttttatatttcaag-acaagatagtagtattaattaggggtatgt 9946319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 102
Target Start/End: Complemental strand, 14044551 - 14044467
Alignment:
Q  17 attaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattag 102  Q
    ||||||||||| ||||| | |||||||| |||||||  ||||||  ||||||||||||| ||| | ||||||  ||||||||||||    
T  14044551 attaatattatcaaattatcatttatttttatgtgtgttaaatttgacttttcatatttgaag-ataagttagcagtattaattag 14044467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 102
Target Start/End: Complemental strand, 36347654 - 36347570
Alignment:
Q  17 attaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattag 102  Q
    ||||||||||| |||||| | ||| |||||||||||| ||||||  ||| |||| |||||||| | |||||| || ||||||||||    
T  36347654 attaatattatcaaattgatttttgtttgtatgtgtattaaatttgactattcacatttcaag-acaagttagtaatattaattag 36347570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 10934058 - 10934118
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaa 78  Q
    |||||||||  ||||| || ||| |||||||||||| ||||||  ||||||||||||||||    
T  10934058 ttaatattaccaaattattctttgtttgtatgtgtattaaatttgacttttcatatttcaa 10934118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 24781320 - 24781245
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagta 94  Q
    |||||||||| |||||||| ||| |||||||||||| ||||||  | |||||| |||| |||| ||||||| |||||    
T  24781320 ttaatattatcaaattgttcttt-tttgtatgtgtattaaatttgatttttcacatttgaagacaaagttagtagta 24781245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 98
Target Start/End: Original strand, 32068070 - 32068118
Alignment:
Q  50 tgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaa 98  Q
    |||| ||||||  |||||||||||||||||| ||||||| |||||||||    
T  32068070 tgtattaaatttgacttttcatatttcaagacaaagttagtagtattaa 32068118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 110
Target Start/End: Complemental strand, 99870 - 99779
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    |||||||||  |||||||  ||| |||| ||||||| ||||||  ||||||||||||||||| | |||||| |||||||||||||||| ||||    
T  99870 ttaatattacgaaattgtcttttgtttgaatgtgtattaaatttgacttttcatatttcaag-acaagttagtagtattaattagaggcatgt 99779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 35; Significance: 0.00000000008; HSPs: 2)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 61335 - 61281
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcata 72  Q
    ||||||||||||||||||  ||||||| |||||||| |||||| |||||||||||    
T  61335 ttaatattattaaattgtcctttatttatatgtgtattaaatttaacttttcata 61281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 110
Target Start/End: Original strand, 49188 - 49280
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaac-ttttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    |||||||||||||||||| |||| |||| |||| || ||||||  || |||||||||||||| || || ||| ||||||||||||| |||||||    
T  49188 ttaatattattaaattgtcatttgtttgcatgtttattaaatttgactttttcatatttcaa-aacaaattagtagtattaattaggggtatgt 49280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 63 - 116
Target Start/End: Original strand, 24156 - 24208
Alignment:
Q  63 acttttcatatttcaagaaaaagttaatagtattaattagaggtatgtgtagaa 116  Q
    |||||||||||||||||| || |||||||||||||||||| ||||||| |||||    
T  24156 acttttcatatttcaagataa-gttaatagtattaattaggggtatgtttagaa 24208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1091 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold1091
Description:

Target: scaffold1091; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 110
Target Start/End: Complemental strand, 1942 - 1875
Alignment:
Q  42 tttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagtattaattagaggtatgt 110  Q
    |||||||||||| ||||||  |||||||||||| ||||| ||| ||| ||||||||||||| |||||||    
T  1942 tttgtatgtgtattaaatttgacttttcatattgcaagacaaa-ttagtagtattaattaggggtatgt 1875  T

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Target: scaffold0005 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 116
Target Start/End: Original strand, 214670 - 214769
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatag--tattaattagaggtatgtgtaga 115  Q
    |||||||||  ||||||| |||| |||||||||||| ||||||  |||||| |||||| ||| | |||||| |||  |||||||||| ||||||| ||||    
T  214670 ttaatattaccaaattgtcatttgtttgtatgtgtattaaatttgactttttatattttaag-ataagttagtagtatattaattaggggtatgtttaga 214768  T

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Target: scaffold0166 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 23703 - 23628
Alignment:
Q  18 ttaatattattaaattgttatttatttgtatgtgtactaaattcaacttttcatatttcaagaaaaagttaatagta 94  Q
    |||||||||| |||||||| ||| |||||||||||| ||||||  | |||||| |||| |||| ||||||| |||||    
T  23703 ttaatattatcaaattgttcttt-tttgtatgtgtattaaatttgatttttcacatttgaagacaaagttagtagta 23628  T

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