View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF11233_low_7 (Length: 443)
Name: NF11233_low_7
Description: NF11233
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11233_low_7 |
 | |
|
| [»] scaffold1207 (1 HSPs) |
| | |
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Alignment Details
Target: chr7 (Bit Score: 345; Significance: 0; HSPs: 36)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 345; E-Value: 0
Query Start/End: Original strand, 18 - 430
Target Start/End: Original strand, 8602147 - 8602559
Alignment:
| Q |
18 |
aaaagttccaccaccgagatcaaatatgaaaatatttctctcttcaacacaattagctctcttttgaaggccatatgcaagagcagctgcagttggctca |
117 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8602147 |
aaaagttccaccaccaagatcaaatatgaaaatatttctctcttcaacacaattagctctcttttgaaggccatatgcaagagcagctgcagttggctca |
8602246 |
T |
|
| Q |
118 |
ttgattatccgcattacattgaggccagcaatggcaccagcatcttttgtggcttttcgttgagaatcattgaaataagcaggcacagtaacaactgcat |
217 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||||||||||||||| |
|
|
| T |
8602247 |
ttgattatccgcattacattgagaccagcaatggcaccagcatcttttgtggcttttcgctgagaatcattaaaataagccggcacagtaacaactgcat |
8602346 |
T |
|
| Q |
218 |
tctccacagatgactccaaaaacttctctgcaatctcacgcatctttgttaggactattgatgagatttcctcagcacagaagcgcttttccccaccctt |
317 |
Q |
| |
|
||| |||| |||||||| ||||||||||||||| |||||||||||||| ||||| ||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
8602347 |
tcttgacaggtgactccagaaacttctctgcaatttcacgcatctttgtaaggaccattgatgagatttcctcagcacagaagtgcttttccccaccctt |
8602446 |
T |
|
| Q |
318 |
atacataacaatgatttcaggtttgtcatcattgccaggaacaaccttaaatggccacaactgtatgtcagtctgaatgacagaatcactatatttcctt |
417 |
Q |
| |
|
|||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
8602447 |
atacttaacaatgatctcaggtttgtcatcattgccaggaacaaccttaaatggccacaaccgtatgtcattctgaatgacagaatcactatatttcctt |
8602546 |
T |
|
| Q |
418 |
ccaattaacctct |
430 |
Q |
| |
|
||||||||||||| |
|
|
| T |
8602547 |
ccaattaacctct |
8602559 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 18 - 422
Target Start/End: Complemental strand, 8382871 - 8382467
Alignment:
| Q |
18 |
aaaagttccaccaccgagatcaaatatgaaaatatttctctcttcaacacaattagctctcttttgaaggccatatgcaagagcagctgcagttggctca |
117 |
Q |
| |
|
||||||||||||||| |||||||| |||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||||||||| |
|
|
| T |
8382871 |
aaaagttccaccaccaagatcaaagatgaaaatatttctctcttcaagacaattagctctcttctgaaggccatatgcaagagcagcggcagttggctca |
8382772 |
T |
|
| Q |
118 |
ttgattatccgcattacattgaggccagcaatggcaccagcatcttttgtggcttttcgttgagaatcattgaaataagcaggcacagtaacaactgcat |
217 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| |||||||| ||||||||| ||| |
|
|
| T |
8382771 |
ttgattatccgcattacattgaggccagcaatcgcaccagcatcttttgtggctttccgttgagaatcattgaaatatgcaggcacggtaacaactacat |
8382672 |
T |
|
| Q |
218 |
tctccacagatgactccaaaaacttctctgcaatctcacgcatctttgttaggactattgatgagatttcctcagcacagaagcgcttttccccaccctt |
317 |
Q |
| |
|
|||| | || |||||||||||| |||||||||||||||||||||||| | ||||| || || ||||||||||| ||||| | | | |||||| ||||||| |
|
|
| T |
8382671 |
tctcgataggtgactccaaaaaattctctgcaatctcacgcatctttttgaggaccatagaggagatttcctcggcacaaaggtgtttttcctcaccctt |
8382572 |
T |
|
| Q |
318 |
atacataacaatgatttcaggtttgtcatcattgccaggaacaaccttaaatggccacaactgtatgtcagtctgaatgacagaatcactatatttcctt |
417 |
Q |
| |
|
|||| ||||||| || ||||| ||||||||| |||| || || ||||||||||| || ||||||||| ||||||| | ||||||||||||||||||| |
|
|
| T |
8382571 |
atacttaacaattatctcaggcttgtcatcagaaccagcaagtactttaaatggccataattgtatgtcattctgaataatagaatcactatatttcctt |
8382472 |
T |
|
| Q |
418 |
ccaat |
422 |
Q |
| |
|
||||| |
|
|
| T |
8382471 |
ccaat |
8382467 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 75 - 430
Target Start/End: Complemental strand, 7877671 - 7877316
Alignment:
| Q |
75 |
tctcttttgaaggccatatgcaagagcagctgcagttggctcattgattatccgcattacattgaggccagcaatggcaccagcatcttttgtggctttt |
174 |
Q |
| |
|
|||||||||||||||||||||||| ||||| |||||||| ||||| ||||||||||| ||||||||||| |||| |||||||||||||||||||||||| |
|
|
| T |
7877671 |
tctcttttgaaggccatatgcaagggcagcagcagttggttcattaattatccgcataacattgaggccggcaactgcaccagcatcttttgtggctttt |
7877572 |
T |
|
| Q |
175 |
cgttgagaatcattgaaataagcaggcacagtaacaactgcattctccacagatgactccaaaaacttctctgcaatctcacgcatctttgttaggacta |
274 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||||||| |||| ||||||||||||||||||||||||||| ||||||||||| |||| | |
|
|
| T |
7877571 |
cgttgagaatcattgaaataagccggcacagtaacaactgcattcttgacaggtgactccaaaaacttctctgcaatctcgcgcatctttgtaaggatca |
7877472 |
T |
|
| Q |
275 |
ttgatgagatttcctcagcacagaagcgcttttccccacccttatacataacaatgatttcaggtttgtcatcattgccaggaacaaccttaaatggcca |
374 |
Q |
| |
|
| ||||| |||||||| ||||| ||| |||||||| | ||||||||| |||||||||| ||||| ||||||||| |||| |||||||||||||||||| |
|
|
| T |
7877471 |
tggatgatatttcctcggcacaaaagtgcttttcctcgcccttatacttaacaatgatatcaggcttgtcatcagaaccagcaacaaccttaaatggcca |
7877372 |
T |
|
| Q |
375 |
caactgtatgtcagtctgaatgacagaatcactatatttccttccaattaacctct |
430 |
Q |
| |
|
|||| | || ||| ||||||| |||||||| ||||||||||||||||| ||||||| |
|
|
| T |
7877371 |
caacagaatatcattctgaataacagaatcgctatatttccttccaatcaacctct |
7877316 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 173; E-Value: 7e-93
Query Start/End: Original strand, 74 - 430
Target Start/End: Original strand, 8590867 - 8591223
Alignment:
| Q |
74 |
ctctcttttgaaggccatatgcaagagcagctgcagttggctcattgattatccgcattacattgaggccagcaatggcaccagcatcttttgtggcttt |
173 |
Q |
| |
|
||||||||||||||||||||||||| |||| |||||||| ||||| ||||||||||||||||| | |||||||||| ||||||||||||| || ||||| |
|
|
| T |
8590867 |
ctctcttttgaaggccatatgcaaggccagcggcagttggttcattaattatccgcattacattcaagccagcaatgacaccagcatctttggtagcttt |
8590966 |
T |
|
| Q |
174 |
tcgttgagaatcattgaaataagcaggcacagtaacaactgcattctccacagatgactccaaaaacttctctgcaatctcacgcatctttgttaggact |
273 |
Q |
| |
|
| ||||||||||| |||||||| |||||||||||||||||||||| |||| ||||||||||||||| || |||||||| ||||||||||| || || |
|
|
| T |
8590967 |
cctctgagaatcattaaaataagctggcacagtaacaactgcattcttgacaggtgactccaaaaacttttcagcaatctctcgcatctttgtgagaacc |
8591066 |
T |
|
| Q |
274 |
attgatgagatttcctcagcacagaagcgcttttccccacccttatacataacaatgatttcaggtttgtcatcattgccaggaacaaccttaaatggcc |
373 |
Q |
| |
|
|| |||||||||||||| ||||| | ||||||||| ||||||| ||| |||||||||||||||| ||||||||| || | ||||||||||||||||| |
|
|
| T |
8591067 |
atggatgagatttcctccgcacaaagacgcttttcctcacccttgtacttaacaatgatttcaggcttgtcatcaaaaccggaaacaaccttaaatggcc |
8591166 |
T |
|
| Q |
374 |
acaactgtatgtcagtctgaatgacagaatcactatatttccttccaattaacctct |
430 |
Q |
| |
|
|||| | |||||| ||||||| ||||||||||| ||||||||||||| ||||||| |
|
|
| T |
8591167 |
acaattccatgtcattctgaattacagaatcactgaatttccttccaatcaacctct |
8591223 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 18 - 239
Target Start/End: Original strand, 8538209 - 8538430
Alignment:
| Q |
18 |
aaaagttccaccaccgagatcaaatatgaaaatatttctctcttcaacacaattagctctcttttgaaggccatatgcaagagcagctgcagttggctca |
117 |
Q |
| |
|
||||||||||||||| |||||||| ||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| || || || ||| |
|
|
| T |
8538209 |
aaaagttccaccaccaagatcaaagatgaaaacttttctctcttcaacacaattagctctcttttgaaggccgtatgcaagagcagcagctgtaggttca |
8538308 |
T |
|
| Q |
118 |
ttgattatccgcattacattgaggccagcaatggcaccagcatcttttgtggcttttcgttgagaatcattgaaataagcaggcacagtaacaactgcat |
217 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||||||||||| |||||| |||| || |||||||||||||||||||| || |||| ||||||| |
|
|
| T |
8538309 |
ttgattatccgcattacattgaggccagcaatgacaccagcatctttggtggctcttcgctgtgaatcattgaaataagcaggtactgtaatcactgcat |
8538408 |
T |
|
| Q |
218 |
tctccacagatgactccaaaaa |
239 |
Q |
| |
|
| | |||| |||||||||||| |
|
|
| T |
8538409 |
ttttgacaggtgactccaaaaa |
8538430 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 18 - 262
Target Start/End: Original strand, 8559506 - 8559750
Alignment:
| Q |
18 |
aaaagttccaccaccgagatcaaatatgaaaatatttctctcttcaacacaattagctctcttttgaaggccatatgcaagagcagctgcagttggctca |
117 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||| ||||||||||| |||||||||||| |||||||||||||||||||||||||| ||| |
|
|
| T |
8559506 |
aaaagttccaccaccgagatcaaagatgaaaatatttctctctttaacacaattagatctcttttgaagtccatatgcaagagcagctgcagttggttca |
8559605 |
T |
|
| Q |
118 |
ttgattatccgcattacattgaggccagcaatggcaccagcatcttttgtggcttttcgttgagaatcattgaaataagcaggcacagtaacaactgcat |
217 |
Q |
| |
|
||||||||| |||||||||| || |||||||| |||| |||||||| |||||| ||| |||||||||||| ||||||||||| || |||| || |||| |
|
|
| T |
8559606 |
ttgattatctgcattacattaagaccagcaatttcacctgcatctttggtggctcttctttgagaatcattaaaataagcaggtacggtaatcacagcat |
8559705 |
T |
|
| Q |
218 |
tctccacagatgactccaaaaacttctctgcaatctcacgcatct |
262 |
Q |
| |
|
|||| || | ||||||||||| ||||||||||| ||||||| |
|
|
| T |
8559706 |
tctcaaccgtcgactccaaaaatgcttctgcaatctctcgcatct |
8559750 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 18 - 262
Target Start/End: Original strand, 8581873 - 8582117
Alignment:
| Q |
18 |
aaaagttccaccaccgagatcaaatatgaaaatatttctctcttcaacacaattagctctcttttgaaggccatatgcaagagcagctgcagttggctca |
117 |
Q |
| |
|
|||||||||||| || || ||||| || ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| || ||||| || ||| |
|
|
| T |
8581873 |
aaaagttccacctccaaggtcaaagataaaaatatttctcttatcaacacaattagctctcttttgaaggccatatgcaagagctgccgcagtcggttca |
8581972 |
T |
|
| Q |
118 |
ttgattatccgcattacattgaggccagcaatggcaccagcatcttttgtggcttttcgttgagaatcattgaaataagcaggcacagtaacaactgcat |
217 |
Q |
| |
|
||||||||||||||||||||||| || ||||| |||| |||||||| |||||| ||||||| |||||||| ||||||||||| ||||||| ||||||| |
|
|
| T |
8581973 |
ttgattatccgcattacattgagacctgcaatttcacctgcatctttagtggctcttcgttgtgaatcattaaaataagcaggtacagtaatcactgcat |
8582072 |
T |
|
| Q |
218 |
tctccacagatgactccaaaaacttctctgcaatctcacgcatct |
262 |
Q |
| |
|
||| |||| |||||||||||| |||||||||||| ||||||| |
|
|
| T |
8582073 |
tcttaacaggtgactccaaaaatgcctctgcaatctctcgcatct |
8582117 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 18 - 430
Target Start/End: Complemental strand, 29581836 - 29581424
Alignment:
| Q |
18 |
aaaagttccaccaccgagatcaaatatgaaaatatttctctcttcaacacaattagctctcttttgaaggccatatgcaagagcagctgcagttggctca |
117 |
Q |
| |
|
|||||| |||||||| |||||||| ||||| ||||||| | | ||||| ||||| ||| |||||||| ||||||||||| ||||| |||||||| || |
|
|
| T |
29581836 |
aaaagtgccaccaccaagatcaaagatgaatatatttcgttttccaacaaaattacctcccttttgaataccatatgcaagtgcagcagcagttggttcg |
29581737 |
T |
|
| Q |
118 |
ttgattatccgcattacattgaggccagcaatggcaccagcatcttttgtggcttttcgttgagaatcattgaaataagcaggcacagtaacaactgcat |
217 |
Q |
| |
|
|||||||||| |||||||||||||||||| || ||||||||||| ||||||||||| |||||||||||||||||||||||||| |||| ||||||| |
|
|
| T |
29581736 |
ttgattatcctcattacattgaggccagctataatgccagcatctttggtggcttttcgctgagaatcattgaaataagcaggcacggtaatcactgcat |
29581637 |
T |
|
| Q |
218 |
tctccacagatgactccaaaaacttctctgcaatctcacgcatctttgttaggactattgatgagatttcctcagcacagaagcgcttttccccaccctt |
317 |
Q |
| |
|
||| |||| | |||||||| ||||||||||| ||| ||||||||| |||| || ||||| |||||||||||| || | ||| || ||||||| |
|
|
| T |
29581636 |
tctttacaggcaattccaaaaatttctctgcaatatcatgcatctttgagaggatcatagatgatatttcctcagcaacaaacctcttctcttcaccctt |
29581537 |
T |
|
| Q |
318 |
atacataacaatgatttcaggtttgtcatcattgccaggaacaaccttaaatggccacaactgtatgtcagtctgaatgacagaatcactatatttcctt |
417 |
Q |
| |
|
||| |||||| ||| || ||||||||| |||||| ||| |||||||| |||||||| | ||| ||| |||||| | ||||||||||||||| ||| |
|
|
| T |
29581536 |
gtacttaacaaggatcatgggattgtcatcagtgccagcaactaccttaaagggccacaaatttatatcatcctgaataatagaatcactatattttctt |
29581437 |
T |
|
| Q |
418 |
ccaattaacctct |
430 |
Q |
| |
|
|| |||||||||| |
|
|
| T |
29581436 |
ccgattaacctct |
29581424 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 18 - 265
Target Start/End: Original strand, 8570484 - 8570731
Alignment:
| Q |
18 |
aaaagttccaccaccgagatcaaatatgaaaatatttctctcttcaacacaattagctctcttttgaaggccatatgcaagagcagctgcagttggctca |
117 |
Q |
| |
|
|||||||||||| || || ||||| || ||||||||||||| |||||| |||||||||||||||||||||||||||||||||| || ||||| || ||| |
|
|
| T |
8570484 |
aaaagttccaccgccaaggtcaaagataaaaatatttctcttatcaacaaaattagctctcttttgaaggccatatgcaagagctgccgcagtcggttca |
8570583 |
T |
|
| Q |
118 |
ttgattatccgcattacattgaggccagcaatggcaccagcatcttttgtggcttttcgttgagaatcattgaaataagcaggcacagtaacaactgcat |
217 |
Q |
| |
|
||||||||||||||||||||||| |||||||| |||| |||||||| |||||| ||||||| |||||||| ||||||||||| ||||||| ||||||| |
|
|
| T |
8570584 |
ttgattatccgcattacattgagaccagcaatttcacctgcatctttagtggctcttcgttgtgaatcattaaaataagcaggtacagtaatcactgcat |
8570683 |
T |
|
| Q |
218 |
tctccacagatgactccaaaaacttctctgcaatctcacgcatctttg |
265 |
Q |
| |
|
||| |||| ||||||||||| ||||||||||| |||||||||| |
|
|
| T |
8570684 |
tcttaacaggagactccaaaaatgcttctgcaatctctcgcatctttg |
8570731 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 25 - 292
Target Start/End: Complemental strand, 8636331 - 8636064
Alignment:
| Q |
25 |
ccaccaccgagatcaaatatgaaaatatttctctcttcaacacaattagctctcttttgaaggccatatgcaagagcagctgcagttggctcattgatta |
124 |
Q |
| |
|
|||||||| |||||||||| |||||| |||||||||| |||||| ||| ||||||||||||| ||||| |||| ||| || |||||||| |||||||||| |
|
|
| T |
8636331 |
ccaccaccaagatcaaatacgaaaatgtttctctctttaacacagttacctctcttttgaagtccatacgcaaaagctgcagcagttggttcattgatta |
8636232 |
T |
|
| Q |
125 |
tccgcattacattgaggccagcaatggcaccagcatcttttgtggcttttcgttgagaatcattgaaataagcaggcacagtaacaactgcattctccac |
224 |
Q |
| |
|
|||| |||||||| ||||| |||||||||||||||||||| |||| ||| || |||||||||||||||||||| |||||||||| |||||||||| || |
|
|
| T |
8636231 |
tccgaattacattaaggccggcaatggcaccagcatctttggtggatttacgctgagaatcattgaaataagcgggcacagtaatgactgcattcttgac |
8636132 |
T |
|
| Q |
225 |
agatgactccaaaaacttctctgcaatctcacgcatctttgttaggactattgatgagatttcctcag |
292 |
Q |
| |
|
|||||| |||| | | ||| |||||||| ||||||||||| ||||| || || || |||||||||| |
|
|
| T |
8636131 |
agatgattccagatatgcctcagcaatctctcgcatctttgtcaggaccatagacgatatttcctcag |
8636064 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 18 - 430
Target Start/End: Original strand, 8545806 - 8546217
Alignment:
| Q |
18 |
aaaagttccaccaccgagatcaaatatgaaaatatttctctcttcaacacaattagctctcttttgaaggccatatgcaagagcagctgcagttggctca |
117 |
Q |
| |
|
|||||||||||| || || ||||| || ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| || ||||| || ||| |
|
|
| T |
8545806 |
aaaagttccaccgccaaggtcaaagataaaaatatttctcttatcaac-caattagctctcttttgaaggccatatgcaagagccgccgcagtcggttca |
8545904 |
T |
|
| Q |
118 |
ttgattatccgcattacattgaggccagcaatggcaccagcatcttttgtggcttttcgttgagaatcattgaaataagcaggcacagtaacaactgcat |
217 |
Q |
| |
|
|||||||||||||| ||||| || || ||||| |||| ||||||||||||| | || |||| |||||||| ||||||||||| ||||||| ||||||| |
|
|
| T |
8545905 |
ttgattatccgcatgacatttagaccggcaatttcacctgcatcttttgtggatctttgttgtgaatcattaaaataagcaggtacagtaatcactgcat |
8546004 |
T |
|
| Q |
218 |
tctccacagatgactccaaaaacttctctgcaatctcacgcatctttgttaggactattgatgagatttcctcagcacagaagcgcttttccccaccctt |
317 |
Q |
| |
|
||| |||| |||||||||||| |||||||||||| ||||||| || |||| | ||||| ||||| |||||| ||| |||||||| ||||||| |
|
|
| T |
8546005 |
tcttaacaggtgactccaaaaatgcctctgcaatctctcgcatctgtgagaggatcacagatgatatttcttcagcaacaaagtgcttttcctcaccctt |
8546104 |
T |
|
| Q |
318 |
atacataacaatgatttcaggtttgtcatcattgccaggaacaaccttaaatggccacaactgtatgtcagtctgaatgacagaatcactatatttcctt |
417 |
Q |
| |
|
|| | |||| ||| |||||||||| | || | || |||||||| ||||||||| ||| ||| |||||| | |||||||||||||||||| |
|
|
| T |
8546105 |
gtagttcacaagaattgtcggtttgtcattaacaccggaaatgaccttaaagggccacaacagtagatcattctgaacaaaggaatcactatatttcctt |
8546204 |
T |
|
| Q |
418 |
ccaattaacctct |
430 |
Q |
| |
|
||||||||||||| |
|
|
| T |
8546205 |
ccaattaacctct |
8546217 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 18 - 265
Target Start/End: Original strand, 8576499 - 8576746
Alignment:
| Q |
18 |
aaaagttccaccaccgagatcaaatatgaaaatatttctctcttcaacacaattagctctcttttgaaggccatatgcaagagcagctgcagttggctca |
117 |
Q |
| |
|
|||||||||||| || || ||||| || ||||||||||| | |||||||||||||||||||||||||||||||| |||||||| || ||||| || ||| |
|
|
| T |
8576499 |
aaaagttccaccgccaaggtcaaagataaaaatatttcttttatcaacacaattagctctcttttgaaggccatacgcaagagctgccgcagtcggttca |
8576598 |
T |
|
| Q |
118 |
ttgattatccgcattacattgaggccagcaatggcaccagcatcttttgtggcttttcgttgagaatcattgaaataagcaggcacagtaacaactgcat |
217 |
Q |
| |
|
||||||||| |||| |||||||| |||||||| ||||| |||||||| |||||| ||||||| |||||||| |||||||||||||||| || ||||||| |
|
|
| T |
8576599 |
ttgattatctgcatgacattgagaccagcaattgcacctgcatctttagtggctcttcgttgggaatcattaaaataagcaggcacagaaatcactgcat |
8576698 |
T |
|
| Q |
218 |
tctccacagatgactccaaaaacttctctgcaatctcacgcatctttg |
265 |
Q |
| |
|
||| |||| || || || ||| |||||||||||| |||||||||| |
|
|
| T |
8576699 |
tcttaacaggtgtctgcagaaaagcctctgcaatctctcgcatctttg |
8576746 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 62 - 430
Target Start/End: Complemental strand, 29577620 - 29577252
Alignment:
| Q |
62 |
caacacaattagctctcttttgaaggccatatgcaagagcagctgcagttggctcattgattatccgcattacattgaggccagcaatggcaccagcatc |
161 |
Q |
| |
|
||||| ||||| |||||||||||| ||||||||||| ||||| |||||||| ||||||||||||||||||||||||||||||||||| || ||||| |
|
|
| T |
29577620 |
caacaaaattacctctcttttgaattccatatgcaagtgcagcagcagttggttcattgattatccgcattacattgaggccagcaataatgccggcatc |
29577521 |
T |
|
| Q |
162 |
ttttgtggcttttcgttgagaatcattgaaataagcaggcacagtaacaactgcattctccacagatgactccaaaaacttctctgcaatctcacgcatc |
261 |
Q |
| |
|
||| ||||||||||| |||||||||||||||||||| ||||| || | |||||||||| || | | |||||||||| |||||||||||||| ||||| |
|
|
| T |
29577520 |
tttggtggcttttcgctgagaatcattgaaataagctggcactgtgatcactgcattctttacgggtaactccaaaaatttctctgcaatctcctgcatc |
29577421 |
T |
|
| Q |
262 |
tttgttaggactattgatgagatttcctcagcacagaagcgcttttccccacccttatacataacaatgatttcaggtttgtcatcattgccaggaacaa |
361 |
Q |
| |
|
|||| |||| || || || |||||||||||| |||| ||| || ||||| ||| |||||| ||| | || ||||||||| ||||||| | |
|
|
| T |
29577420 |
tttgagaggatcatagacgatatttcctcagcaacaaagcacttctctttgcccttgtacttaacaaggatcttgggattgtcatcagctccaggaatga |
29577321 |
T |
|
| Q |
362 |
ccttaaatggccacaactgtatgtcagtctgaatgacagaatcactatatttccttccaattaacctct |
430 |
Q |
| |
|
||||||| |||||||||| ||| || || |||| | |||||||| ||||||||||||||||||||| |
|
|
| T |
29577320 |
ccttaaagggccacaactttatatctttccgaataatggaatcactgaatttccttccaattaacctct |
29577252 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 19 - 206
Target Start/End: Original strand, 8610091 - 8610278
Alignment:
| Q |
19 |
aaagttccaccaccgagatcaaatatgaaaatatttctctcttcaacacaattagctctcttttgaaggccatatgcaagagcagctgcagttggctcat |
118 |
Q |
| |
|
||||| |||||||| |||||||| || ||||||||||| | ||| ||||||||||||||||| ||||| |||||||||||||| || || ||||| |||| |
|
|
| T |
8610091 |
aaagtcccaccaccaagatcaaagataaaaatatttctattttccacacaattagctctcttctgaagaccatatgcaagagccgcagccgttggttcat |
8610190 |
T |
|
| Q |
119 |
tgattatccgcattacattgaggccagcaatggcaccagcatcttttgtggcttttcgttgagaatcattgaaataagcaggcacagt |
206 |
Q |
| |
|
|||| ||||| |||||||| ||||||| |||| |||||||||||||||||||||| || ||||||||||| ||||||||||||||||| |
|
|
| T |
8610191 |
tgataatccggattacattaaggccagaaatgacaccagcatcttttgtggctttccgctgagaatcattaaaataagcaggcacagt |
8610278 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 18 - 296
Target Start/End: Original strand, 8647050 - 8647328
Alignment:
| Q |
18 |
aaaagttccaccaccgagatcaaatatgaaaatatttctctcttcaacacaattagctctcttttgaaggccatatgcaagagcagctgcagttggctca |
117 |
Q |
| |
|
||||||||||||||| || || || ||||| ||||||| |||||| ||||||| | |||||| | |||||||||||| |||||||| || ||||| ||| |
|
|
| T |
8647050 |
aaaagttccaccaccaaggtcgaagatgaatatatttcgttcttcagcacaatttgttctcttgtcaaggccatatgcgagagcagcagctgttggttca |
8647149 |
T |
|
| Q |
118 |
ttgattatccgcattacattgaggccagcaatggcaccagcatcttttgtggcttttcgttgagaatcattgaaataagcaggcacagtaacaactgcat |
217 |
Q |
| |
|
||||||||||| || | ||| |||||||||||||| || |||||| | ||||||||||| ||| |||||||||| || |||||||||||||||||||||| |
|
|
| T |
8647150 |
ttgattatccggatgatattaaggccagcaatggccccggcatctatagtggcttttcgctgataatcattgaagtatgcaggcacagtaacaactgcat |
8647249 |
T |
|
| Q |
218 |
tctccacagatgactccaaaaacttctctgcaatctcacgcatctttgttaggactattgatgagatttcctcagcaca |
296 |
Q |
| |
|
||| |||| ||| ||| | |||||||||| ||| ||||||||||| |||| || ||||| |||||||||||||| |
|
|
| T |
8647250 |
tctttacaggggacattaaatatttctctgcaacctctcgcatctttgtgaggatcatcgatgatatttcctcagcaca |
8647328 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 19 - 218
Target Start/End: Original strand, 6789686 - 6789885
Alignment:
| Q |
19 |
aaagttccaccaccgagatcaaatatgaaaatatttctctcttcaacacaattagctctcttttgaaggccatatgcaagagcagctgcagttggctcat |
118 |
Q |
| |
|
||||| |||||||| || || || | |||||||||| | ||| || | |||||| |||||| | ||||||||||||||||||||| || ||||| |||| |
|
|
| T |
6789686 |
aaagtgccaccaccaaggtcgaagacgaaaatatttttttctccaccgtaattagttctcttatcaaggccatatgcaagagcagcagctgttggttcat |
6789785 |
T |
|
| Q |
119 |
tgattatccgcattacattgaggccagcaatggcaccagcatcttttgtggcttttcgttgagaatcattgaaataagcaggcacagtaacaactgcatt |
218 |
Q |
| |
|
||||||| || || ||||| || ||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
6789786 |
tgattattcgtataacattaagaccagcaatggcaccagcatctaaagtggctttccgttgagaatcattgaaataagcaggcacagtaataactgcatt |
6789885 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 18 - 296
Target Start/End: Complemental strand, 8585701 - 8585423
Alignment:
| Q |
18 |
aaaagttccaccaccgagatcaaatatgaaaatatttctctcttcaacacaattagctctcttttgaaggccatatgcaagagcagctgcagttggctca |
117 |
Q |
| |
|
|||||| |||||||| |||||||| | |||||||||| || || |||| ||| || | || | |||||||||||||| ||| || ||||| || ||| |
|
|
| T |
8585701 |
aaaagtcccaccaccaagatcaaacacaaaaatatttcgttcaccatcacagttacctttgttgtcaaggccatatgcaatagctgcagcagtgggttca |
8585602 |
T |
|
| Q |
118 |
ttgattatccgcattacattgaggccagcaatggcaccagcatcttttgtggcttttcgttgagaatcattgaaataagcaggcacagtaacaactgcat |
217 |
Q |
| |
|
|||||||||| ||| ||||| ||||||||||||||||||||||| | ||||||||||| ||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
8585601 |
ttgattatcctcataacattaaggccagcaatggcaccagcatccatggtggcttttcgctgagaatcattgaaataagcaggcacagtcacaactgcat |
8585502 |
T |
|
| Q |
218 |
tctccacagatgactccaaaaacttctctgcaatctcacgcatctttgttaggactattgatgagatttcctcagcaca |
296 |
Q |
| |
|
| | |||| ||| | |||| | |||||||||||| ||| ||||| |||| || ||||| |||||||||||||| |
|
|
| T |
8585501 |
tttgaacaggtgatttcaaatatgtctctgcaatcttcttcatgtttgtgaggatgatagatgatatttcctcagcaca |
8585423 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 64 - 296
Target Start/End: Original strand, 3147491 - 3147723
Alignment:
| Q |
64 |
acacaattagctctcttttgaaggccatatgcaagagcagctgcagttggctcattgattatccgcattacattgaggccagcaatggcaccagcatctt |
163 |
Q |
| |
|
|||||||||| |||||| | || ||||| |||| ||| || ||||| || ||||||||||||||||| | ||| ||||||||||| ||||||||||| |
|
|
| T |
3147491 |
acacaattagttctcttgtccagtccatacgcaatagctgcagcagtaggttcattgattatccgcataatattaaggccagcaataacaccagcatcta |
3147590 |
T |
|
| Q |
164 |
ttgtggcttttcgttgagaatcattgaaataagcaggcacagtaacaactgcattctccacagatgactccaaaaacttctctgcaatctcacgcatctt |
263 |
Q |
| |
|
|||| ||||| || |||| |||||||||||||||||| || |||||||||||||||| |||| | || ||||||| ||||||| ||| |||||||| |
|
|
| T |
3147591 |
ttgtcgctttccgctgagcatcattgaaataagcaggtacggtaacaactgcattcttgacaggcaattctaaaaactcctctgcagtcttgcgcatctt |
3147690 |
T |
|
| Q |
264 |
tgttaggactattgatgagatttcctcagcaca |
296 |
Q |
| |
|
|||||| || || ||||||||||| |||||||| |
|
|
| T |
3147691 |
tgttagaaccatagatgagatttcttcagcaca |
3147723 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 18 - 305
Target Start/End: Complemental strand, 13333451 - 13333164
Alignment:
| Q |
18 |
aaaagttccaccaccgagatcaaatatgaaaatatttctctcttcaacacaattagctctcttttgaaggccatatgcaagagcagctgcagttggctca |
117 |
Q |
| |
|
|||||| |||||||| |||||||| | |||||||||| || || |||||| | |||||| | |||||||||||||| ||| || ||||| || ||| |
|
|
| T |
13333451 |
aaaagtaccaccacccagatcaaagacaaaaatatttcgcttaccatcacaatcacgtctcttgtcaaggccatatgcaatagctgcagcagtaggttca |
13333352 |
T |
|
| Q |
118 |
ttgattatccgcattacattgaggccagcaatggcaccagcatcttttgtggcttttcgttgagaatcattgaaataagcaggcacagtaacaactgcat |
217 |
Q |
| |
|
|||||||| || || | ||| ||||||||||| |||||||||||| | ||||| ||||| |||||||||||||| ||||| |||||||||||||| |||| |
|
|
| T |
13333351 |
ttgattattcgaatgatattaaggccagcaatagcaccagcatctatggtggcctttcgctgagaatcattgaagtaagccggcacagtaacaacggcat |
13333252 |
T |
|
| Q |
218 |
tctccacagatgactccaaaaacttctctgcaatctcacgcatctttgttaggactattgatgagatttcctcagcacagaagcgctt |
305 |
Q |
| |
|
||| || | |||| ||| | | |||||||| ||| ||||||||||| ||||| || ||||| |||||||| ||||| ||| |||| |
|
|
| T |
13333251 |
tcttgactggtgaccccatatatgcctctgcaacctctcgcatctttgtaaggaccatagatgatatttcctcggcacaaaagtgctt |
13333164 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 84 - 218
Target Start/End: Original strand, 8628771 - 8628905
Alignment:
| Q |
84 |
aaggccatatgcaagagcagctgcagttggctcattgattatccgcattacattgaggccagcaatggcaccagcatcttttgtggcttttcgttgagaa |
183 |
Q |
| |
|
|||||||||||||| ||| || ||||| || ||||||||||||| ||| ||||| |||||||||||||||||||||| | ||||||||||| |||||| |
|
|
| T |
8628771 |
aaggccatatgcaatagctgcagcagtggggtcattgattatcctcataacattaaggccagcaatggcaccagcattcatggtggcttttcgctgagaa |
8628870 |
T |
|
| Q |
184 |
tcattgaaataagcaggcacagtaacaactgcatt |
218 |
Q |
| |
|
|||||||||||||||||||| || ||||||||||| |
|
|
| T |
8628871 |
tcattgaaataagcaggcacggtgacaactgcatt |
8628905 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 75 - 305
Target Start/End: Complemental strand, 10494312 - 10494082
Alignment:
| Q |
75 |
tctcttttgaaggccatatgcaagagcagctgcagttggctcattgattatccgcattacattgaggccagcaatggcaccagcatcttttgtggctttt |
174 |
Q |
| |
|
|||||| | |||||||||||||| ||| || ||||| || |||||||||||||| || ||||| ||||||||||| ||||||||||| | || || ||| |
|
|
| T |
10494312 |
tctcttgtcaaggccatatgcaatagctgcagcagtaggttcattgattatccgaatgacattaaggccagcaatagcaccagcatcaatagtagccttt |
10494213 |
T |
|
| Q |
175 |
cgttgagaatcattgaaataagcaggcacagtaacaactgcattctccacagatgactccaaaaacttctctgcaatctcacgcatctttgttaggacta |
274 |
Q |
| |
|
||||||||||| ||||| ||||| |||||||||||||| ||||||| || | |||| ||||| | |||||||| ||| ||||||||| | ||||| | |
|
|
| T |
10494212 |
cgttgagaatcgttgaagtaagccggcacagtaacaacagcattcttgactggtgaccccaaatatgcctctgcaacctctcgcatctttataaggacca |
10494113 |
T |
|
| Q |
275 |
ttgatgagatttcctcagcacagaagcgctt |
305 |
Q |
| |
|
| ||||| |||||||| ||||| ||| |||| |
|
|
| T |
10494112 |
tagatgatatttcctcggcacaaaagtgctt |
10494082 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #22
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 18 - 208
Target Start/End: Original strand, 17268112 - 17268302
Alignment:
| Q |
18 |
aaaagttccaccaccgagatcaaatatgaaaatatttctctcttcaacacaattagctctcttttgaaggccatatgcaagagcagctgcagttggctca |
117 |
Q |
| |
|
|||||| |||||||| || ||||| | |||||||| | ||||||||||| |||| |||||| |||||||||||||| ||| || |||||||| ||| |
|
|
| T |
17268112 |
aaaagtcccaccaccaaggtcaaagacaaaaatattccgttcttcaacacagttagttctcttgccaaggccatatgcaatagctgcagcagttggttca |
17268211 |
T |
|
| Q |
118 |
ttgattatccgcattacattgaggccagcaatggcaccagcatcttttgtggcttttcgttgagaatcattgaaataagcaggcacagtaa |
208 |
Q |
| |
|
||||||| | || |||||| |||||||||||| ||||||||||| | ||||||||||| |||||||| ||||| ||||| || ||||||| |
|
|
| T |
17268212 |
ttgattaccttcaatacattaaggccagcaatgacaccagcatctatggtggcttttcgctgagaatcgttgaagtaagccgggacagtaa |
17268302 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #23
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 75 - 220
Target Start/End: Original strand, 8667649 - 8667794
Alignment:
| Q |
75 |
tctcttttgaaggccatatgcaagagcagctgcagttggctcattgattatccgcattacattgaggccagcaatggcaccagcatcttttgtggctttt |
174 |
Q |
| |
|
|||||| | |||||||||||||| ||| || ||||| || |||||||||||||| || ||||| || |||||||| | |||||||||| | ||||| ||| |
|
|
| T |
8667649 |
tctcttgtcaaggccatatgcaatagctgccgcagtaggttcattgattatccgaatgacattaagtccagcaatagtaccagcatctatggtggccttt |
8667748 |
T |
|
| Q |
175 |
cgttgagaatcattgaaataagcaggcacagtaacaactgcattct |
220 |
Q |
| |
|
|| |||||||||||||| ||||| |||||||||||||| ||||||| |
|
|
| T |
8667749 |
cgctgagaatcattgaagtaagctggcacagtaacaacggcattct |
8667794 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #24
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 84 - 296
Target Start/End: Complemental strand, 27830804 - 27830592
Alignment:
| Q |
84 |
aaggccatatgcaagagcagctgcagttggctcattgattatccgcattacattgaggccagcaatggcaccagcatcttttgtggcttttcgttgagaa |
183 |
Q |
| |
|
|||||||||||||| ||| || ||||| ||||| | ||||||||||| ||||| ||||||||||||||||| | |||| ||||||||||||||||| |
|
|
| T |
27830804 |
aaggccatatgcaatagctgcagcagtaggctcgcttattatccgcataacattaaggccagcaatggcaccggaatctacagtggcttttcgttgagag |
27830705 |
T |
|
| Q |
184 |
tcattgaaataagcaggcacagtaacaactgcattctccacagatgactccaaaaacttctctgcaatctcacgcatctttgttaggactattgatgaga |
283 |
Q |
| |
|
|||||||||||||| ||||| || | |||||||||| || | ||| | |||| | ||| || ||||| ||||||||||| ||||| |||||||| | |
|
|
| T |
27830704 |
tcattgaaataagctggcacggttattactgcattcttaaccggtgattgcaaatatgcctccgcgatctctcgcatctttgtaaggaccattgatgaaa |
27830605 |
T |
|
| Q |
284 |
tttcctcagcaca |
296 |
Q |
| |
|
||||||| ||||| |
|
|
| T |
27830604 |
tttcctccgcaca |
27830592 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #25
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 88 - 231
Target Start/End: Original strand, 8659606 - 8659749
Alignment:
| Q |
88 |
ccatatgcaagagcagctgcagttggctcattgattatccgcattacattgaggccagcaatggcaccagcatcttttgtggcttttcgttgagaatcat |
187 |
Q |
| |
|
|||||||||| ||| || ||||| || ||||| |||||| | || ||||| ||||||||||||||||| | |||| | ||||||||||| |||||||||| |
|
|
| T |
8659606 |
ccatatgcaatagctgcagcagtaggttcattaattatctgaatgacattaaggccagcaatggcaccggaatctatggtggcttttcgctgagaatcat |
8659705 |
T |
|
| Q |
188 |
tgaaataagcaggcacagtaacaactgcattctccacagatgac |
231 |
Q |
| |
|
|||| || |||||||| |||||||| ||||||| ||||| |||| |
|
|
| T |
8659706 |
tgaactatgcaggcactgtaacaacagcattcttcacaggtgac |
8659749 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #26
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 75 - 296
Target Start/End: Complemental strand, 8671568 - 8671347
Alignment:
| Q |
75 |
tctcttttgaaggccatatgcaagagcagctgcagttggctcattgattatccgcattacattgaggccagcaatggcaccagcatcttttgtggctttt |
174 |
Q |
| |
|
|||||| | |||||||||||||| ||| || ||||| || |||||||||||||| || ||||| || |||||||| | ||||||||| | ||||| || |
|
|
| T |
8671568 |
tctcttgtcaaggccatatgcaatagctgcagcagtaggttcattgattatccgaatgacattaagtccagcaatagtaccagcatcaatggtggccgtt |
8671469 |
T |
|
| Q |
175 |
cgttgagaatcattgaaataagcaggcacagtaacaactgcattctccacagatgactccaaaaacttctctgcaatctcacgcatctttgttaggacta |
274 |
Q |
| |
|
|| |||||||||||||| ||||| ||||| |||||||| ||||||| || | |||||||| | | ||| |||| ||| ||||||||||| || || | |
|
|
| T |
8671468 |
cgctgagaatcattgaagtaagctggcacggtaacaacggcattcttgaccggtgactccagatatgcctccgcaacctctcgcatctttgtaagcacca |
8671369 |
T |
|
| Q |
275 |
ttgatgagatttcctcagcaca |
296 |
Q |
| |
|
| || || |||||||||||||| |
|
|
| T |
8671368 |
tagaagatatttcctcagcaca |
8671347 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #27
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 84 - 212
Target Start/End: Original strand, 8654689 - 8654817
Alignment:
| Q |
84 |
aaggccatatgcaagagcagctgcagttggctcattgattatccgcattacattgaggccagcaatggcaccagcatcttttgtggcttttcgttgagaa |
183 |
Q |
| |
|
|||||||||||||| ||| || ||||| || ||||||| |||||| || || || || ||||||||||||||||||||| | || |||||||| ||||| |
|
|
| T |
8654689 |
aaggccatatgcaatagctgcggcagtaggttcattgagtatccgaatgacgttaagtccagcaatggcaccagcatctatggttgcttttcgctgagag |
8654788 |
T |
|
| Q |
184 |
tcattgaaataagcaggcacagtaacaac |
212 |
Q |
| |
|
|||||||| || || |||||||||||||| |
|
|
| T |
8654789 |
tcattgaagtatgccggcacagtaacaac |
8654817 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #28
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 115 - 218
Target Start/End: Original strand, 1301734 - 1301837
Alignment:
| Q |
115 |
tcattgattatccgcattacattgaggccagcaatggcaccagcatcttttgtggcttttcgttgagaatcattgaaataagcaggcacagtaacaactg |
214 |
Q |
| |
|
||||| |||||| | || ||||| ||||||||||| ||||| |||||| | ||||||||||| |||||||||||||||| ||||||||||||||||| | |
|
|
| T |
1301734 |
tcattaattatctgaatgacattaaggccagcaattgcaccggcatctatggtggcttttcgctgagaatcattgaaatgtgcaggcacagtaacaacag |
1301833 |
T |
|
| Q |
215 |
catt |
218 |
Q |
| |
|
|||| |
|
|
| T |
1301834 |
catt |
1301837 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 63 - 208
Target Start/End: Original strand, 17260459 - 17260604
Alignment:
| Q |
63 |
aacacaattagctctcttttgaaggccatatgcaagagcagctgcagttggctcattgattatccgcattacattgaggccagcaatggcaccagcatct |
162 |
Q |
| |
|
||||||||||| |||||| |||||||||||||| ||| || ||| | || ||||| |||| | || |||| ||||||||||| ||||||||||| |
|
|
| T |
17260459 |
aacacaattagttctcttgacaaggccatatgcaatagctgcagcaataggttcattaattaacttcaaaacataaaggccagcaataacaccagcatct |
17260558 |
T |
|
| Q |
163 |
tttgtggcttttcgttgagaatcattgaaataagcaggcacagtaa |
208 |
Q |
| |
|
| ||||||||||| ||||||||||||||||||||||| ||||||| |
|
|
| T |
17260559 |
atggtggcttttcgctgagaatcattgaaataagcaggaacagtaa |
17260604 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 139 - 220
Target Start/End: Complemental strand, 8640421 - 8640340
Alignment:
| Q |
139 |
aggccagcaatggcaccagcatcttttgtggcttttcgttgagaatcattgaaataagcaggcacagtaacaactgcattct |
220 |
Q |
| |
|
|||||||||||||| || |||||| | ||||||||| | ||| |||||||||| |||||||||| ||||||||||||||||| |
|
|
| T |
8640421 |
aggccagcaatggccccggcatctatggtggctttttgctgataatcattgaagtaagcaggcatagtaacaactgcattct |
8640340 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 133 - 226
Target Start/End: Complemental strand, 8017293 - 8017200
Alignment:
| Q |
133 |
acattgaggccagcaatggcaccagcatcttttgtggcttttcgttgagaatcattgaaataagcaggcacagtaacaactgcattctccacag |
226 |
Q |
| |
|
|||||||| || |||||| |||| ||||| |||||||||| || || ||||||||||| ||||| || || |||||||| ||||||| ||||| |
|
|
| T |
8017293 |
acattgagtcctgcaatgacaccggcatcctttgtggcttgacgctgcgaatcattgaagtaagctggaactgtaacaacggcattcttcacag |
8017200 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 94 - 220
Target Start/End: Original strand, 8102916 - 8103042
Alignment:
| Q |
94 |
gcaagagcagctgcagttggctcattgattatccgcattacattgaggccagcaatggcaccagcatcttttgtggcttttcgttgagaatcattgaaat |
193 |
Q |
| |
|
|||| |||||| |||||||||||||| || || | || ||||| | ||||| || ||||||||||||| || |||| || |||||||||||||| | |
|
|
| T |
8102916 |
gcaatagcagcagcagttggctcattaataattctcaaaacatttaaaccagcgataacaccagcatctttagttgcttgacgctgagaatcattgaagt |
8103015 |
T |
|
| Q |
194 |
aagcaggcacagtaacaactgcattct |
220 |
Q |
| |
|
||||||| ||||| || || ||||||| |
|
|
| T |
8103016 |
aagcagggacagtgacgacggcattct |
8103042 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 400 - 430
Target Start/End: Original strand, 8576881 - 8576911
Alignment:
| Q |
400 |
gaatcactatatttccttccaattaacctct |
430 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
8576881 |
gaatcactatatttccttccaattaacctct |
8576911 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 400 - 430
Target Start/End: Original strand, 8582255 - 8582285
Alignment:
| Q |
400 |
gaatcactatatttccttccaattaacctct |
430 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
8582255 |
gaatcactatatttccttccaattaacctct |
8582285 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 430
Target Start/End: Original strand, 8538552 - 8538621
Alignment:
| Q |
361 |
accttaaatggccacaactgtatgtcagtctgaatgacagaatcactatatttccttccaattaacctct |
430 |
Q |
| |
|
||||| || ||||||||| ||| ||| ||||||| ||||||||||||||||| ||||||| ||||||| |
|
|
| T |
8538552 |
accttgaagggccacaacagtaaatcattctgaataacagaatcactatattttcttccaaccaacctct |
8538621 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 100 - 220
Target Start/End: Original strand, 39985901 - 39986021
Alignment:
| Q |
100 |
gcagctgcagttggctcattgattatccgcattacattgaggccagcaatggcaccagcatcttttgtggcttttcgttgagaatcattgaaataagcag |
199 |
Q |
| |
|
||||| ||||| ||||||||||| || ||||| ||||| || || ||||| | |||||||| || || |||| || || || ||||| || ||||||| |
|
|
| T |
39985901 |
gcagcagcagtgggctcattgataattcgcatgacattaagaccggcaataactccagcatccttggtagcttgacgctgggagtcattaaagtaagcag |
39986000 |
T |
|
| Q |
200 |
gcacagtaacaactgcattct |
220 |
Q |
| |
|
| ||||||||||| ||||||| |
|
|
| T |
39986001 |
ggacagtaacaacagcattct |
39986021 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 109; Significance: 1e-54; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 18 - 262
Target Start/End: Original strand, 12528677 - 12528921
Alignment:
| Q |
18 |
aaaagttccaccaccgagatcaaatatgaaaatatttctctcttcaacacaattagctctcttttgaaggccatatgcaagagcagctgcagttggctca |
117 |
Q |
| |
|
|||||||||||| || || ||||| || ||||| |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| || |
|
|
| T |
12528677 |
aaaagttccaccgccaaggtcaaaaataaaaatccttctctcttcaagacaattagctctcttttgaatgccatatgcaagagcagctgcagttggttcg |
12528776 |
T |
|
| Q |
118 |
ttgattatccgcattacattgaggccagcaatggcaccagcatcttttgtggcttttcgttgagaatcattgaaataagcaggcacagtaacaactgcat |
217 |
Q |
| |
|
||||||||||| ||||||||||||||||||||| |||||||||| || |||||| ||| || |||||||||||||| || ||||| |||| ||||||| |
|
|
| T |
12528777 |
ttgattatccgtattacattgaggccagcaatgacaccagcatccttggtggctcgtcgctgcgaatcattgaaatacgctggcaccgtaatcactgcat |
12528876 |
T |
|
| Q |
218 |
tctccacagatgactccaaaaacttctctgcaatctcacgcatct |
262 |
Q |
| |
|
||| |||| |||||| | ||| ||||||||||| ||||||| |
|
|
| T |
12528877 |
tcttaacaggtgactcaagaaatgcatctgcaatctctcgcatct |
12528921 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 18 - 296
Target Start/End: Original strand, 43745022 - 43745298
Alignment:
| Q |
18 |
aaaagttccaccaccgagatcaaatatgaaaatatttctctcttcaacacaattagctctcttttgaaggccatatgcaagagcagctgcagttggctca |
117 |
Q |
| |
|
|||||| |||||||| || ||||| |||||||||||||| || ||| | |||| |||||||| || |||||||||| ||| || ||||| || ||| |
|
|
| T |
43745022 |
aaaagtcccaccacccaggtcaaagatgaaaatatttcttcctcgcacagagttagttctcttttccagaccatatgcaatagctgcagcagtgggttca |
43745121 |
T |
|
| Q |
118 |
ttgattatccgcattacattgaggccagcaatggcaccagcatcttttgtggcttttcgttgagaatcattgaaataagcaggcacagtaacaactgcat |
217 |
Q |
| |
|
||||||||| ||| |||| || ||||||||||||||||||||| |||||||| || ||| |||||||||||||||| ||||||||||||||||||| |
|
|
| T |
43745122 |
ttgattatcttcataacatcaagcccagcaatggcaccagcatcta--gtggctttccgctgataatcattgaaataagccggcacagtaacaactgcat |
43745219 |
T |
|
| Q |
218 |
tctccacagatgactccaaaaacttctctgcaatctcacgcatctttgttaggactattgatgagatttcctcagcaca |
296 |
Q |
| |
|
||| |||| | | |||||| |||||||||||||||||||||||||||| | || ||||||||||| || ||||| |
|
|
| T |
43745220 |
tcttgacaggcaattgcaaaaatgtctctgcaatctcacgcatctttgttagaatcatagatgagatttcttcggcaca |
43745298 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 93; Significance: 4e-45; HSPs: 5)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 18 - 298
Target Start/End: Original strand, 30775425 - 30775705
Alignment:
| Q |
18 |
aaaagttccaccaccgagatcaaatatgaaaatatttctctcttcaacacaattagctctcttttgaaggccatatgcaagagcagctgcagttggctca |
117 |
Q |
| |
|
|||||| |||||||| |||||||| | |||||||| ||||| || |||| || ||||||| | ||| |||||||||| ||| |||||||| |||||| |
|
|
| T |
30775425 |
aaaagtcccaccaccaagatcaaagacaaaaatattcctctcagcatcacacctacctctcttctcaagtccatatgcaatagctgctgcagtgggctca |
30775524 |
T |
|
| Q |
118 |
ttgattatccgcattacattgaggccagcaatggcaccagcatcttttgtggcttttcgttgagaatcattgaaataagcaggcacagtaacaactgcat |
217 |
Q |
| |
|
|| ||||| | ||| ||||| || |||||||||||||||||||| | ||||||||||| || | |||||||||||||||||||||||| | |||||||| |
|
|
| T |
30775525 |
ttaattattctcataacattaagaccagcaatggcaccagcatccatagtggcttttcgctgtgcatcattgaaataagcaggcacagtgataactgcat |
30775624 |
T |
|
| Q |
218 |
tctccacagatgactccaaaaacttctctgcaatctcacgcatctttgttaggactattgatgagatttcctcagcacaga |
298 |
Q |
| |
|
| | || | || |||||| || ||||||||||||| | ||| ||||| |||||||||||||| |||||||| ||||||| |
|
|
| T |
30775625 |
ttttaactggggattccaaatacatctctgcaatctctctcatatttgtgaggactattgatgaaatttcctcggcacaga |
30775705 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 18 - 220
Target Start/End: Original strand, 35132621 - 35132823
Alignment:
| Q |
18 |
aaaagttccaccaccgagatcaaatatgaaaatatttctctcttcaacacaattagctctcttttgaaggccatatgcaagagcagctgcagttggctca |
117 |
Q |
| |
|
|||||| |||||||| ||||| || | ||||||||| ||| || |||||| || |||||| | |||||||||||||| || || ||||| || ||| |
|
|
| T |
35132621 |
aaaagtgccaccaccaagatcgaagacaaaaatattttgttctccagcacaatcagatctcttgtcaaggccatatgcaaccgctgcggcagtaggttca |
35132720 |
T |
|
| Q |
118 |
ttgattatccgcattacattgaggccagcaatggcaccagcatcttttgtggcttttcgttgagaatcattgaaataagcaggcacagtaacaactgcat |
217 |
Q |
| |
|
|| |||| | ||| |||||| | |||||||| |||||||||||| | ||||||||||||||||||||| | |||||||||||||||||||||||||||| |
|
|
| T |
35132721 |
ttcattactctcataacattgggaccagcaatagcaccagcatctatagtggcttttcgttgagaatcactaaaataagcaggcacagtaacaactgcat |
35132820 |
T |
|
| Q |
218 |
tct |
220 |
Q |
| |
|
||| |
|
|
| T |
35132821 |
tct |
35132823 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 75 - 220
Target Start/End: Complemental strand, 9335829 - 9335684
Alignment:
| Q |
75 |
tctcttttgaaggccatatgcaagagcagctgcagttggctcattgattatccgcattacattgaggccagcaatggcaccagcatcttttgtggctttt |
174 |
Q |
| |
|
|||||| | |||||||||||||| ||| || ||||| || |||||||||||||| || ||||| ||||||||||| | |||||||||| | ||||| ||| |
|
|
| T |
9335829 |
tctcttatcaaggccatatgcaatagctgcagcagtaggttcattgattatccgaatgacattaaggccagcaatagtaccagcatctatggtggccttt |
9335730 |
T |
|
| Q |
175 |
cgttgagaatcattgaaataagcaggcacagtaacaactgcattct |
220 |
Q |
| |
|
|| |||||||||||||| ||||| ||||| |||||||| ||||||| |
|
|
| T |
9335729 |
cgctgagaatcattgaagtaagctggcacggtaacaacggcattct |
9335684 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 151 - 220
Target Start/End: Original strand, 54396729 - 54396798
Alignment:
| Q |
151 |
gcaccagcatcttttgtggcttttcgttgagaatcattgaaataagcaggcacagtaacaactgcattct |
220 |
Q |
| |
|
|||||||||||||| || |||| |||||||||||||||||||||||||| ||||||||||| ||||||| |
|
|
| T |
54396729 |
gcaccagcatctttcgtagcttgacgttgagaatcattgaaataagcaggaacagtaacaacagcattct |
54396798 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 133 - 220
Target Start/End: Complemental strand, 23587613 - 23587526
Alignment:
| Q |
133 |
acattgaggccagcaatggcaccagcatcttttgtggcttttcgttgagaatcattgaaataagcaggcacagtaacaactgcattct |
220 |
Q |
| |
|
|||||||| |||| |||| |||| ||||||||||| |||| ||||| ||||| ||||| |||||||||||||| ||||| ||||||| |
|
|
| T |
23587613 |
acattgagtccagaaatgacaccggcatcttttgtagcttgacgttgtgaatcgttgaagtaagcaggcacagttacaacggcattct |
23587526 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 87; Significance: 2e-41; HSPs: 9)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 18 - 220
Target Start/End: Original strand, 12234862 - 12235064
Alignment:
| Q |
18 |
aaaagttccaccaccgagatcaaatatgaaaatatttctctcttcaacacaattagctctcttttgaaggccatatgcaagagcagctgcagttggctca |
117 |
Q |
| |
|
|||||| ||||| ||||||||||| | |||||||||| ||| ||||||||| || |||||| | ||| |||||||||| ||| ||||| | || || |
|
|
| T |
12234862 |
aaaagtgccaccgccgagatcaaaaacaaaaatatttcgttctccaacacaatcagttctcttgtcaagaccatatgcaacagcggctgccatgggttcg |
12234961 |
T |
|
| Q |
118 |
ttgattatccgcattacattgaggccagcaatggcaccagcatcttttgtggcttttcgttgagaatcattgaaataagcaggcacagtaacaactgcat |
217 |
Q |
| |
|
|| |||| || ||| |||||||||||||||||| ||||||||||| | || ||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
12234962 |
ttcattaccctcataacattgaggccagcaatgacaccagcatctatagttgcttttcgttgagaatcattgaaataagcaggcacggtaacaactgcat |
12235061 |
T |
|
| Q |
218 |
tct |
220 |
Q |
| |
|
||| |
|
|
| T |
12235062 |
tct |
12235064 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 18 - 219
Target Start/End: Original strand, 7542399 - 7542600
Alignment:
| Q |
18 |
aaaagttccaccaccgagatcaaatatgaaaatatttctctcttcaacacaattagctctcttttgaaggccatatgcaagagcagctgcagttggctca |
117 |
Q |
| |
|
|||||| ||||| || |||||||| | |||||||||| |||| || || ||| || |||||| | |||||||||||||| ||| || ||||| || ||| |
|
|
| T |
7542399 |
aaaagtgccaccgccaagatcaaaaacaaaaatatttcgctctccatcataatcagttctcttgtcaaggccatatgcaacagctgcggcagtaggttca |
7542498 |
T |
|
| Q |
118 |
ttgattatccgcattacattgaggccagcaatggcaccagcatcttttgtggcttttcgttgagaatcattgaaataagcaggcacagtaacaactgcat |
217 |
Q |
| |
|
|| ||| || ||| ||||||||||||||||||||||| |||||| | ||||||||||||||||||||||| ||||||||||| |||||||||||||||| |
|
|
| T |
7542499 |
ttcattgccctcataacattgaggccagcaatggcacccgcatctatagtggcttttcgttgagaatcattaaaataagcaggtacagtaacaactgcat |
7542598 |
T |
|
| Q |
218 |
tc |
219 |
Q |
| |
|
|| |
|
|
| T |
7542599 |
tc |
7542600 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 18 - 430
Target Start/End: Complemental strand, 16661987 - 16661575
Alignment:
| Q |
18 |
aaaagttccaccaccgagatcaaatatgaaaatatttctctcttcaacacaattagctctcttttgaaggccatatgcaagagcagctgcagttggctca |
117 |
Q |
| |
|
|||||| |||||||| |||||||| | ||||||||||| || || |||||||| ||| || | |||||||||||||| ||| |||||||| || ||| |
|
|
| T |
16661987 |
aaaagtcccaccaccaagatcaaagacaaaaatatttctttcaccatcacaattacttcttttgtcaaggccatatgcaatagctgctgcagtgggttca |
16661888 |
T |
|
| Q |
118 |
ttgattatccgcattacattgaggccagcaatggcaccagcatcttttgtggcttttcgttgagaatcattgaaataagcaggcacagtaacaactgcat |
217 |
Q |
| |
|
|||||||||| || || || ||||||||||||||||||||||| | ||||||||||| |||||||| || ||||||||||| ||||| |||||||||| |
|
|
| T |
16661887 |
ttgattatcctcacaacgttaaggccagcaatggcaccagcatccatggtggcttttcgctgagaatcgttaaaataagcaggaacagtgacaactgcat |
16661788 |
T |
|
| Q |
218 |
tctccacagatgactccaaaaacttctctgcaatctcacgcatctttgttaggactattgatgagatttcctcagcacagaagcgcttttccccaccctt |
317 |
Q |
| |
|
| | || | ||| |||||| | |||||||| ||| ||| ||||| ||||| || |||||||||||||| ||||| | | |||| ||| |||||| |
|
|
| T |
16661787 |
ttttaaccggtgattccaaataagcctctgcaacctccttcatgtttgtgaggacaatagatgagatttcctcggcacaaaggagcttctcctgaccctt |
16661688 |
T |
|
| Q |
318 |
atacataacaatgatttcaggtttgtcatcattgccaggaacaaccttaaatggccacaactgtatgtcagtctgaatgacagaatcactatatttcctt |
417 |
Q |
| |
|
||| ||||| | || ||||||||||| | |||| || |||||| || ||||||||| |||| || | |||| || | |||||| ||||||| |
|
|
| T |
16661687 |
gtacttaacactaatcgtaggtttgtcattaacaccagcaataaccttgaacggccacaacagtatatctttttgaacaacggggtcactaaatttccta |
16661588 |
T |
|
| Q |
418 |
ccaattaacctct |
430 |
Q |
| |
|
||||||||||||| |
|
|
| T |
16661587 |
ccaattaacctct |
16661575 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 18 - 220
Target Start/End: Complemental strand, 12245401 - 12245199
Alignment:
| Q |
18 |
aaaagttccaccaccgagatcaaatatgaaaatatttctctcttcaacacaattagctctcttttgaaggccatatgcaagagcagctgcagttggctca |
117 |
Q |
| |
|
|||||| |||||||| |||||||| | ||||| ||||| ||| ||||||||| ||||||||||| |||||||||||||| ||| || ||||| || ||| |
|
|
| T |
12245401 |
aaaagtgccaccaccaagatcaaacacaaaaatgtttctttctccaacacaatcagctctcttttcaaggccatatgcaacagctgcagcagtgggttca |
12245302 |
T |
|
| Q |
118 |
ttgattatccgcattacattgaggccagcaatggcaccagcatcttttgtggcttttcgttgagaatcattgaaataagcaggcacagtaacaactgcat |
217 |
Q |
| |
|
|| |||| || ||| |||||||| |||||||| | ||||||||| | || |||||||| ||||||||| | ||||||||||| ||||||||||| |||| |
|
|
| T |
12245301 |
ttcattaccctcataacattgagaccagcaattgagccagcatctatcgttgcttttcgctgagaatcactaaaataagcaggtacagtaacaacagcat |
12245202 |
T |
|
| Q |
218 |
tct |
220 |
Q |
| |
|
||| |
|
|
| T |
12245201 |
tct |
12245199 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 18 - 220
Target Start/End: Original strand, 43625585 - 43625787
Alignment:
| Q |
18 |
aaaagttccaccaccgagatcaaatatgaaaatatttctctcttcaacacaattagctctcttttgaaggccatatgcaagagcagctgcagttggctca |
117 |
Q |
| |
|
|||||| |||||||| || ||||| ||||||||||||| ||| ||||||||||| |||||| | |||||| ||||| |||||||| || ||||| ||| |
|
|
| T |
43625585 |
aaaagtaccaccaccaaggtcaaagatgaaaatatttcgttctccaacacaattaattctcttgttaaggccgtatgctagagcagcagctgttggttca |
43625684 |
T |
|
| Q |
118 |
ttgattatccgcattacattgaggccagcaatggcaccagcatcttttgtggcttttcgttgagaatcattgaaataagcaggcacagtaacaactgcat |
217 |
Q |
| |
|
||||||| || | ||||| ||||| ||||| ||||| ||||| | ||||||||||| |||||||||||||| ||||||||||| ||||||||||||| |
|
|
| T |
43625685 |
ttgattactcgtaaaacattaaggccgacaatgacaccaacatctatggtggcttttcgctgagaatcattgaagtaagcaggcacggtaacaactgcat |
43625784 |
T |
|
| Q |
218 |
tct |
220 |
Q |
| |
|
||| |
|
|
| T |
43625785 |
tct |
43625787 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 75 - 296
Target Start/End: Complemental strand, 16657455 - 16657234
Alignment:
| Q |
75 |
tctcttttgaaggccatatgcaagagcagctgcagttggctcattgattatccgcattacattgaggccagcaatggcaccagcatcttttgtggctttt |
174 |
Q |
| |
|
|||||| | ||| |||||||||| ||| || ||||| || |||||||| || || || ||||| |||||||| ||||||||||||||| | ||||||||| |
|
|
| T |
16657455 |
tctcttgtcaagaccatatgcaatagctgcagcagtaggttcattgataattcgaatgacattaaggccagcgatggcaccagcatctatggtggctttt |
16657356 |
T |
|
| Q |
175 |
cgttgagaatcattgaaataagcaggcacagtaacaactgcattctccacagatgactccaaaaacttctctgcaatctcacgcatctttgttaggacta |
274 |
Q |
| |
|
|| || ||||||||||| ||||| |||||||||||||| ||||||| |||| ||||||| ||| ||| |||| || ||||||||||| |||| | |
|
|
| T |
16657355 |
cgctgcgaatcattgaagtaagctggcacagtaacaacagcattcttgacaggcgactccataaatgcctcagcaacttctcgcatctttgtaaggatca |
16657256 |
T |
|
| Q |
275 |
ttgatgagatttcctcagcaca |
296 |
Q |
| |
|
| ||||| |||||||||||||| |
|
|
| T |
16657255 |
tagatgatatttcctcagcaca |
16657234 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 18 - 212
Target Start/End: Original strand, 11999567 - 11999761
Alignment:
| Q |
18 |
aaaagttccaccaccgagatcaaatatgaaaatatttctctcttcaacacaattagctctcttttgaaggccatatgcaagagcagctgcagttggctca |
117 |
Q |
| |
|
|||||| ||||| || |||||||| | ||||| ||||| ||| ||||||||| ||||||||| | |||||||||||||| || || ||||| || ||| |
|
|
| T |
11999567 |
aaaagtgccaccgccaagatcaaagactaaaatgtttctttctccaacacaatcagctctcttgtcaaggccatatgcaacagttgcagcagtgggttca |
11999666 |
T |
|
| Q |
118 |
ttgattatccgcattacattgaggccagcaatggcaccagcatcttttgtggcttttcgttgagaatcattgaaataagcaggcacagtaacaac |
212 |
Q |
| |
|
|| |||| || || ||||||| ||||||||| ||||| |||||| | ||||||||||||||||||||| | |||||||| || ||||||||||| |
|
|
| T |
11999667 |
ttcattacccttataacattgatgccagcaattgcaccggcatctatagtggcttttcgttgagaatcactaaaataagctggtacagtaacaac |
11999761 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 18 - 263
Target Start/End: Original strand, 14703581 - 14703826
Alignment:
| Q |
18 |
aaaagttccaccaccgagatcaaatatgaaaatatttctctcttcaacacaattagctctcttttgaaggccatatgcaagagcagctgcagttggctca |
117 |
Q |
| |
|
|||||| |||||||| |||||||| | || ||||| | ||| || || ||| || |||||| | |||||||||||||| ||| || || || || ||| |
|
|
| T |
14703581 |
aaaagtaccaccaccaagatcaaagacaaatatattacgttctccaccataatcagttctcttgtcaaggccatatgcaatagctgcagctgtaggttca |
14703680 |
T |
|
| Q |
118 |
ttgattatccgcattacattgaggccagcaatggcaccagcatcttttgtggcttttcgttgagaatcattgaaataagcaggcacagtaacaactgcat |
217 |
Q |
| |
|
|| |||| || ||| ||||||||||| ||||| |||||||||| | |||||||||| |||||||||| | |||||||||||||| ||||||||||||| |
|
|
| T |
14703681 |
ttcattaccctcataacattgaggccggcaataacaccagcatccatagtggcttttctttgagaatcactaaaataagcaggcaccgtaacaactgcat |
14703780 |
T |
|
| Q |
218 |
tctccacagatgactccaaaaacttctctgcaatctcacgcatctt |
263 |
Q |
| |
|
||| |||| |||||| ||| | |||| ||||| || |||||||| |
|
|
| T |
14703781 |
tcttaacagttgactctaaatatgtctcagcaatttctcgcatctt |
14703826 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 18 - 220
Target Start/End: Complemental strand, 12258576 - 12258374
Alignment:
| Q |
18 |
aaaagttccaccaccgagatcaaatatgaaaatatttctctcttcaacacaattagctctcttttgaaggccatatgcaagagcagctgcagttggctca |
117 |
Q |
| |
|
|||||| |||||||| |||||||| | |||||||| | | ||| ||||||||| ||| || | |||||||||||||| ||| || ||||| || ||| |
|
|
| T |
12258576 |
aaaagtgccaccaccaagatcaaagacaaaaatattccgtttttcgacacaattaattcttttgtcaaggccatatgcaaaagctgcagcagtaggttca |
12258477 |
T |
|
| Q |
118 |
ttgattatccgcattacattgaggccagcaatggcaccagcatcttttgtggcttttcgttgagaatcattgaaataagcaggcacagtaacaactgcat |
217 |
Q |
| |
|
|| | |||| ||| ||||| |||||| |||| ||| ||||| | |||||||| | ||| |||||| | ||||| |||||||||||||||||||||| |
|
|
| T |
12258476 |
tttaatatcttcataacattcaggccaacaatattacccacatctatagtggctttcctttgtgaatcactaaaatatgcaggcacagtaacaactgcat |
12258377 |
T |
|
| Q |
218 |
tct |
220 |
Q |
| |
|
||| |
|
|
| T |
12258376 |
tct |
12258374 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 80; Significance: 2e-37; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 18 - 308
Target Start/End: Original strand, 15595207 - 15595502
Alignment:
| Q |
18 |
aaaagttccaccaccgagatcaaatatgaaaatatttctctcttcaacacaattagctctcttttgaaggccatatgcaagagc---agctg----cagt |
110 |
Q |
| |
|
|||||| |||||||| |||||||| | ||||||||||| ||| ||||||| ||| ||||| | |||||||||||||| ||| ||||| | || |
|
|
| T |
15595207 |
aaaagtgccaccaccaagatcaaagacaaaaatatttctttctccaacacagttaatcctcttgtcaaggccatatgcaatagctgcagctgtcagctgt |
15595306 |
T |
|
| Q |
111 |
tggctcattgattatccgcattacattgaggccagcaatggcaccagcatcttttgtggcttttcgttgagaatcattgaaataagcaggcacagtaaca |
210 |
Q |
| |
|
|| |||||||||| ||| || ||||| ||||||||||||||||| |||||| | ||||||||||||||||||||||||| |||||||||||| |||||| |
|
|
| T |
15595307 |
cggttcattgattacccgtataacattaaggccagcaatggcacctgcatctatagtggcttttcgttgagaatcattgagataagcaggcacggtaaca |
15595406 |
T |
|
| Q |
211 |
actgcattctccacagatgactccaaaaacttctctgcaatctcacgcatctttgttaggactattgatgagatttcctcagcacagaagcgcttttc |
308 |
Q |
| |
|
|||||||| | || | |||| ||||| |||||||||| ||| ||||||||| | || | || || || |||||||||||||| ||||||||||| |
|
|
| T |
15595407 |
actgcattgtttacgggagact--aaaaatttctctgcaacctctcgcatctttttgagaatcatagacgatatttcctcagcacaaaagcgcttttc |
15595502 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 18 - 321
Target Start/End: Complemental strand, 34466788 - 34466485
Alignment:
| Q |
18 |
aaaagttccaccaccgagatcaaatatgaaaatatttctctcttcaacacaattagctctcttttgaaggccatatgcaagagcagctgcagttggctca |
117 |
Q |
| |
|
|||||| |||||||| || ||||| | ||||||||||| ||||| ||| | | ||||||||| | ||| |||||||||| ||| || ||||| || ||| |
|
|
| T |
34466788 |
aaaagtcccaccaccaaggtcaaagacgaaaatatttccttcttccacaaagtcagctctcttgtcaagtccatatgcaatagctgcagcagtgggttca |
34466689 |
T |
|
| Q |
118 |
ttgattatccgcattacattgaggccagcaatggcaccagcatcttttgtggcttttcgttgagaatcattgaaataagcaggcacagtaacaactgcat |
217 |
Q |
| |
|
|||||||| ||| ||||| ||||||||||| | ||||||||| || |||||||| ||||||||||| |||||||||||||| || | |||||||| |
|
|
| T |
34466688 |
ttgattatttgcaaaacattaaggccagcaatagtaccagcatccacagtagcttttcgctgagaatcattaaaataagcaggcacggtgataactgcat |
34466589 |
T |
|
| Q |
218 |
tctccacagatgactccaaaaacttctctgcaatctcacgcatctttgttaggactattgatgagatttcctcagcacagaagcgcttttccccaccctt |
317 |
Q |
| |
|
||| | | ||| |||||| | | ||||||| | || |||||||||| |||| || |||||||||||||||||||| | | |||| ||| |||||| |
|
|
| T |
34466588 |
tcttaattggtgattccaaatattcctctgcagtatcccgcatctttgaaaggatcatagatgagatttcctcagcacataggtgcttctcctgaccctt |
34466489 |
T |
|
| Q |
318 |
atac |
321 |
Q |
| |
|
|||| |
|
|
| T |
34466488 |
atac |
34466485 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 88 - 227
Target Start/End: Complemental strand, 4678483 - 4678344
Alignment:
| Q |
88 |
ccatatgcaagagcagctgcagttggctcattgattatccgcattacattgaggccagcaatggcaccagcatcttttgtggcttttcgttgagaatcat |
187 |
Q |
| |
|
|||||||||| ||| || |||| || || |||||||| | || ||||| || ||||||||||||||||||||| | || ||||||||||||||||||| |
|
|
| T |
4678483 |
ccatatgcaatagctgcaacagtaggttcgttgattatttgaatgacattaagtccagcaatggcaccagcatctatggtagcttttcgttgagaatcat |
4678384 |
T |
|
| Q |
188 |
tgaaataagcaggcacagtaacaactgcattctccacaga |
227 |
Q |
| |
|
|||| || ||||||||||||||||| |||||| |||||| |
|
|
| T |
4678383 |
tgaagtatgcaggcacagtaacaacgacattcttcacaga |
4678344 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 77; Significance: 1e-35; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 88 - 296
Target Start/End: Original strand, 28220194 - 28220402
Alignment:
| Q |
88 |
ccatatgcaagagcagctgcagttggctcattgattatccgcattacattgaggccagcaatggcaccagcatcttttgtggcttttcgttgagaatcat |
187 |
Q |
| |
|
|||||||||| |||||| ||||| || ||||||| ||||| | ||||| || |||||||||| ||| |||||| | |||||||| || ||| |||||| |
|
|
| T |
28220194 |
ccatatgcaatagcagcagcagtgggttcattgactatccttagaacatttagaccagcaatggtacctgcatctatggtggctttccgctgataatcat |
28220293 |
T |
|
| Q |
188 |
tgaaataagcaggcacagtaacaactgcattctccacagatgactccaaaaacttctctgcaatctcacgcatctttgttaggactattgatgagatttc |
287 |
Q |
| |
|
||||||||||||||||||||| ||||||||||| |||| | |||||||| ||||||||||||||||||||||||||| || || ||||||||||| |
|
|
| T |
28220294 |
tgaaataagcaggcacagtaataactgcattcttgacaggaaattccaaaaaggcctctgcaatctcacgcatctttgttagaaccatagatgagatttc |
28220393 |
T |
|
| Q |
288 |
ctcagcaca |
296 |
Q |
| |
|
|| ||||| |
|
|
| T |
28220394 |
ttcggcaca |
28220402 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 51; Significance: 5e-20; HSPs: 8)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 18 - 296
Target Start/End: Original strand, 28910755 - 28911033
Alignment:
| Q |
18 |
aaaagttccaccaccgagatcaaatatgaaaatatttctctcttcaacacaattagctctcttttgaaggccatatgcaagagcagctgcagttggctca |
117 |
Q |
| |
|
|||||| |||| ||| || || || |||||| |||||| ||| || |||| | ||||||||| | |||||||||| || ||| | ||||| ||||| |
|
|
| T |
28910755 |
aaaagtcccactacccaggtcgaagatgaaagtatttcgttctccagcacactcagctctcttgtcgaggccatatgaaatagctacagcagtgagctca |
28910854 |
T |
|
| Q |
118 |
ttgattatccgcattacattgaggccagcaatggcaccagcatcttttgtggcttttcgttgagaatcattgaaataagcaggcacagtaacaactgcat |
217 |
Q |
| |
|
|||||||||||||| ||||| || | ||||||||||||||||| | |||||||| | | |||||||||||||||| ||| || |||||||| ||||| |
|
|
| T |
28910855 |
ttgattatccgcataacattaagcctgacaatggcaccagcatctatggtggctttcctctaagaatcattgaaataaccagtcaaagtaacaattgcat |
28910954 |
T |
|
| Q |
218 |
tctccacagatgactccaaaaacttctctgcaatctcacgcatctttgttaggactattgatgagatttcctcagcaca |
296 |
Q |
| |
|
||| || | | |||||||| || |||||||||| || ||||||| || || | |||||||||||||||||||| |
|
|
| T |
28910955 |
tcttgacgggcaattccaaaaatgtcactgcaatctcgcgaatctttgagagaaccacagatgagatttcctcagcaca |
28911033 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 88 - 206
Target Start/End: Original strand, 11156513 - 11156631
Alignment:
| Q |
88 |
ccatatgcaagagcagctgcagttggctcattgattatccgcattacattgaggccagcaatggcaccagcatcttttgtggcttttcgttgagaatcat |
187 |
Q |
| |
|
|||||||||| |||||||||| |||||||||||||| ||||| ||||||||||||||||| |||| ||||||| |||| | ||||| || |||| |
|
|
| T |
11156513 |
ccatatgcaattgcagctgcagaaggctcattgattattcgcataacattgaggccagcaataacacccgcatcttgggtggactggcgttgtgagtcat |
11156612 |
T |
|
| Q |
188 |
tgaaataagcaggcacagt |
206 |
Q |
| |
|
| || |||||||||||||| |
|
|
| T |
11156613 |
taaagtaagcaggcacagt |
11156631 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 84 - 162
Target Start/End: Original strand, 11170809 - 11170887
Alignment:
| Q |
84 |
aaggccatatgcaagagcagctgcagttggctcattgattatccgcattacattgaggccagcaatggcaccagcatct |
162 |
Q |
| |
|
|||||||||||||| ||||||||||| |||||||||| ||| |||| ||||||||||||||||| ||||| |||||| |
|
|
| T |
11170809 |
aaggccatatgcaattgcagctgcagtaggctcattgagtattcgcaaaacattgaggccagcaatagcacccgcatct |
11170887 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 87 - 162
Target Start/End: Original strand, 11209634 - 11209709
Alignment:
| Q |
87 |
gccatatgcaagagcagctgcagttggctcattgattatccgcattacattgaggccagcaatggcaccagcatct |
162 |
Q |
| |
|
||||||||||| ||||||||||| |||||||||| ||| |||| ||||||||||||||||| ||||| |||||| |
|
|
| T |
11209634 |
gccatatgcaattgcagctgcagtaggctcattgagtattcgcaaaacattgaggccagcaatagcacccgcatct |
11209709 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 88 - 162
Target Start/End: Original strand, 11196966 - 11197040
Alignment:
| Q |
88 |
ccatatgcaagagcagctgcagttggctcattgattatccgcattacattgaggccagcaatggcaccagcatct |
162 |
Q |
| |
|
|||||||||| |||||||||| |||||||||||||| ||||| ||||||||||||||||| |||| |||||| |
|
|
| T |
11196966 |
ccatatgcaattgcagctgcagaaggctcattgattattcgcataacattgaggccagcaataacacccgcatct |
11197040 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 88 - 162
Target Start/End: Original strand, 11200131 - 11200205
Alignment:
| Q |
88 |
ccatatgcaagagcagctgcagttggctcattgattatccgcattacattgaggccagcaatggcaccagcatct |
162 |
Q |
| |
|
|||||||||| |||||||||| |||||||||||||| |||| ||||||||||||||||| ||||| |||||| |
|
|
| T |
11200131 |
ccatatgcaattgcagctgcagaaggctcattgattattcgcaaaacattgaggccagcaatagcacccgcatct |
11200205 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 87 - 162
Target Start/End: Original strand, 11276196 - 11276271
Alignment:
| Q |
87 |
gccatatgcaagagcagctgcagttggctcattgattatccgcattacattgaggccagcaatggcaccagcatct |
162 |
Q |
| |
|
||||||||||| ||||||||||| |||||||| ||||| ||||| || || ||||||||||| ||||| |||||| |
|
|
| T |
11276196 |
gccatatgcaattgcagctgcagtaggctcatttattattcgcataacgtttaggccagcaatagcacccgcatct |
11276271 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 84 - 162
Target Start/End: Complemental strand, 11241375 - 11241297
Alignment:
| Q |
84 |
aaggccatatgcaagagcagctgcagttggctcattgattatccgcattacattgaggccagcaatggcaccagcatct |
162 |
Q |
| |
|
|||||||||||||| ||| ||||||| |||||| ||||||| | || || |||||||||||||| ||||| |||||| |
|
|
| T |
11241375 |
aaggccatatgcaattgcaactgcagtaggctcagtgattattcacaaaactttgaggccagcaatagcacccgcatct |
11241297 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1207 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold1207
Description:
Target: scaffold1207; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 87 - 162
Target Start/End: Original strand, 1127 - 1202
Alignment:
| Q |
87 |
gccatatgcaagagcagctgcagttggctcattgattatccgcattacattgaggccagcaatggcaccagcatct |
162 |
Q |
| |
|
||||||||||| ||||||||||| |||||||||| ||| | || ||||||||||||||||| ||||| |||||| |
|
|
| T |
1127 |
gccatatgcaattgcagctgcagtaggctcattgagtattcccaaaacattgaggccagcaatagcacctgcatct |
1202 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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