View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11234_low_10 (Length: 259)

Name: NF11234_low_10
Description: NF11234
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11234_low_10
NF11234_low_10
[»] chr8 (60 HSPs)
chr8 (1-140)||(24266335-24266474)
chr8 (139-244)||(41662354-41662459)
chr8 (139-244)||(43245869-43245974)
chr8 (143-239)||(765736-765832)
chr8 (141-239)||(12281124-12281222)
chr8 (139-244)||(15156136-15156241)
chr8 (141-195)||(16928942-16928997)
chr8 (1-140)||(24554266-24554405)
chr8 (4-82)||(7468694-7468772)
chr8 (138-195)||(37752415-37752473)
chr8 (139-195)||(16929241-16929298)
chr8 (139-194)||(37752082-37752138)
chr8 (136-192)||(43162229-43162285)
chr8 (141-195)||(15155883-15155938)
chr8 (1-76)||(29296280-29296355)
chr8 (141-195)||(43246175-43246230)
chr8 (138-195)||(12281425-12281483)
chr8 (141-194)||(13936723-13936776)
chr8 (138-195)||(34313762-34313818)
chr8 (138-194)||(39724048-39724105)
chr8 (139-237)||(3463903-3464001)
chr8 (143-195)||(23123516-23123567)
chr8 (7-99)||(26009805-26009897)
chr8 (143-194)||(74688-74739)
chr8 (148-195)||(7127660-7127707)
chr8 (141-194)||(9823361-9823415)
chr8 (138-194)||(13027281-13027338)
chr8 (138-194)||(22851387-22851444)
chr8 (141-192)||(13026635-13026687)
chr8 (162-244)||(74936-75016)
chr8 (7-134)||(5851844-5851970)
chr8 (148-191)||(9930842-9930885)
chr8 (141-195)||(41662107-41662162)
chr8 (144-193)||(15042148-15042198)
chr8 (141-195)||(18020087-18020140)
chr8 (141-194)||(34498555-34498609)
chr8 (145-195)||(43162538-43162588)
chr8 (159-193)||(43598756-43598790)
chr8 (138-194)||(9822745-9822802)
chr8 (138-194)||(23123335-23123392)
chr8 (138-194)||(25438789-25438846)
chr8 (138-194)||(37397145-37397202)
chr8 (139-191)||(11007561-11007613)
chr8 (208-244)||(37752181-37752217)
chr8 (141-180)||(767720-767759)
chr8 (160-195)||(9465873-9465908)
chr8 (144-193)||(7127923-7127973)
chr8 (141-194)||(13937389-13937443)
chr8 (141-194)||(37396708-37396762)
chr8 (138-190)||(3307335-3307388)
chr8 (141-194)||(3463642-3463694)
chr8 (141-190)||(6092777-6092825)
chr8 (134-194)||(9623495-9623556)
chr8 (144-192)||(22786843-22786892)
chr8 (138-194)||(24473340-24473397)
chr8 (141-190)||(33747984-33748033)
chr8 (160-192)||(22851958-22851990)
chr8 (167-195)||(33748159-33748187)
chr8 (143-195)||(37670255-37670306)
chr8 (141-192)||(41662521-41662573)
[»] chr1 (57 HSPs)
chr1 (1-140)||(46144104-46144243)
chr1 (1-140)||(29217434-29217573)
chr1 (1-140)||(49999041-49999181)
chr1 (1-140)||(52398000-52398139)
chr1 (141-244)||(47955306-47955409)
chr1 (141-195)||(13589658-13589712)
chr1 (1-102)||(40437979-40438080)
chr1 (140-190)||(1176716-1176766)
chr1 (138-195)||(17518601-17518658)
chr1 (134-190)||(49318170-49318226)
chr1 (141-194)||(8108993-8109047)
chr1 (135-193)||(20480613-20480671)
chr1 (141-195)||(41083210-41083264)
chr1 (133-194)||(48190763-48190825)
chr1 (138-195)||(20371352-20371409)
chr1 (144-192)||(22149701-22149750)
chr1 (138-194)||(27172113-27172169)
chr1 (141-195)||(47955607-47955662)
chr1 (141-195)||(17518303-17518357)
chr1 (141-195)||(22149403-22149456)
chr1 (141-194)||(44911025-44911079)
chr1 (142-192)||(46056904-46056953)
chr1 (141-194)||(49284409-49284463)
chr1 (138-194)||(9347123-9347180)
chr1 (141-194)||(9347551-9347604)
chr1 (144-195)||(8108724-8108776)
chr1 (141-189)||(19007735-19007783)
chr1 (138-194)||(50615621-50615677)
chr1 (138-194)||(50623449-50623505)
chr1 (141-195)||(31848191-31848246)
chr1 (141-194)||(32163043-32163097)
chr1 (141-194)||(39692000-39692054)
chr1 (140-244)||(41082908-41083011)
chr1 (141-194)||(48191355-48191409)
chr1 (138-194)||(6002234-6002291)
chr1 (141-194)||(20480168-20480221)
chr1 (138-194)||(48105116-48105173)
chr1 (144-195)||(1177017-1177069)
chr1 (139-194)||(50430081-50430137)
chr1 (7-102)||(17607293-17607388)
chr1 (144-190)||(31847898-31847945)
chr1 (140-190)||(49317751-49317801)
chr1 (141-190)||(999529-999578)
chr1 (141-190)||(4692022-4692071)
chr1 (210-239)||(8108978-8109007)
chr1 (138-194)||(13918443-13918500)
chr1 (138-194)||(26814691-26814748)
chr1 (144-195)||(1176839-1176891)
chr1 (139-194)||(6703894-6703950)
chr1 (14-102)||(17021925-17022013)
chr1 (209-237)||(22149659-22149687)
chr1 (208-244)||(31847961-31847997)
chr1 (144-188)||(46057199-46057243)
chr1 (144-191)||(46823846-46823894)
chr1 (138-190)||(47498298-47498349)
chr1 (142-194)||(47498495-47498547)
chr1 (143-194)||(50526472-50526524)
[»] chr5 (49 HSPs)
chr5 (1-140)||(24082455-24082594)
chr5 (1-140)||(29912388-29912527)
chr5 (6-140)||(6455045-6455179)
chr5 (1-140)||(5623121-5623260)
chr5 (139-244)||(18433013-18433118)
chr5 (141-194)||(22428934-22428987)
chr5 (139-244)||(34576865-34576968)
chr5 (1-140)||(26561479-26561618)
chr5 (141-194)||(22429196-22429249)
chr5 (141-244)||(25115757-25115860)
chr5 (141-197)||(25116058-25116115)
chr5 (141-244)||(25174849-25174952)
chr5 (141-244)||(26020450-26020553)
chr5 (141-195)||(18433315-18433370)
chr5 (138-193)||(23011076-23011131)
chr5 (141-195)||(25175150-25175205)
chr5 (140-194)||(34577164-34577218)
chr5 (138-192)||(37610620-37610674)
chr5 (144-193)||(41382896-41382945)
chr5 (141-194)||(41383167-41383220)
chr5 (139-194)||(18817611-18817667)
chr5 (138-193)||(9665828-9665882)
chr5 (141-190)||(16466746-16466796)
chr5 (138-186)||(12441320-12441367)
chr5 (142-194)||(22729440-22729492)
chr5 (144-192)||(31569910-31569958)
chr5 (138-192)||(37780744-37780799)
chr5 (144-194)||(9665560-9665609)
chr5 (141-194)||(12498567-12498621)
chr5 (141-194)||(12498928-12498982)
chr5 (141-194)||(18816952-18817006)
chr5 (141-194)||(26571164-26571218)
chr5 (144-193)||(41383048-41383100)
chr5 (140-194)||(19514524-19514580)
chr5 (144-193)||(23011383-23011432)
chr5 (141-194)||(37610202-37610255)
chr5 (141-194)||(37780320-37780373)
chr5 (139-194)||(3888237-3888293)
chr5 (139-191)||(22729006-22729058)
chr5 (141-195)||(5187829-5187884)
chr5 (144-194)||(11351427-11351478)
chr5 (144-194)||(21207229-21207280)
chr5 (141-192)||(43464194-43464245)
chr5 (158-192)||(16726096-16726130)
chr5 (141-194)||(19514963-19515017)
chr5 (210-244)||(22429176-22429210)
chr5 (144-194)||(43463759-43463809)
chr5 (138-187)||(2817582-2817631)
chr5 (139-192)||(12441040-12441093)
[»] chr3 (61 HSPs)
chr3 (1-140)||(14819539-14819678)
chr3 (1-140)||(6230352-6230491)
chr3 (1-139)||(18968417-18968555)
chr3 (1-140)||(4147386-4147525)
chr3 (1-140)||(4163939-4164078)
chr3 (1-140)||(21168408-21168547)
chr3 (8-140)||(43429235-43429367)
chr3 (141-195)||(47871121-47871175)
chr3 (138-244)||(20968971-20969076)
chr3 (1-140)||(17320268-17320407)
chr3 (138-195)||(10293908-10293966)
chr3 (141-195)||(20968718-20968773)
chr3 (132-193)||(1927763-1927825)
chr3 (133-194)||(3353120-3353181)
chr3 (141-193)||(8315083-8315135)
chr3 (140-195)||(17372297-17372353)
chr3 (141-231)||(18875155-18875245)
chr3 (144-194)||(1928434-1928484)
chr3 (140-194)||(9027033-9027087)
chr3 (159-244)||(10293627-10293711)
chr3 (144-194)||(14015964-14016014)
chr3 (140-190)||(42627550-42627600)
chr3 (140-194)||(42672977-42673031)
chr3 (133-194)||(48160333-48160395)
chr3 (140-231)||(13657444-13657536)
chr3 (141-193)||(18874882-18874935)
chr3 (141-193)||(45060872-45060925)
chr3 (138-191)||(53688306-53688359)
chr3 (138-194)||(24485460-24485516)
chr3 (138-194)||(42673296-42673352)
chr3 (141-194)||(47870823-47870877)
chr3 (141-194)||(48159897-48159951)
chr3 (138-194)||(3644783-3644840)
chr3 (141-194)||(26007182-26007235)
chr3 (141-194)||(40848521-40848574)
chr3 (140-188)||(45060595-45060644)
chr3 (134-193)||(1100908-1100968)
chr3 (10-102)||(15548876-15548968)
chr3 (142-194)||(17372594-17372645)
chr3 (139-193)||(8314011-8314066)
chr3 (209-244)||(18874957-18874992)
chr3 (131-193)||(22429148-22429211)
chr3 (143-194)||(22429596-22429647)
chr3 (148-187)||(26540876-26540915)
chr3 (7-102)||(34558237-34558332)
chr3 (140-194)||(47666335-47666390)
chr3 (144-194)||(9026739-9026789)
chr3 (146-198)||(18875017-18875071)
chr3 (140-194)||(21896511-21896565)
chr3 (141-194)||(40848961-40849015)
chr3 (141-194)||(53687888-53687942)
chr3 (141-193)||(1101182-1101235)
chr3 (145-193)||(4947263-4947312)
chr3 (138-194)||(27238900-27238957)
chr3 (141-193)||(53766580-53766633)
chr3 (144-195)||(1101089-1101141)
chr3 (148-192)||(3353553-3353597)
chr3 (134-181)||(13657735-13657783)
chr3 (141-185)||(17440763-17440806)
chr3 (141-194)||(21895657-21895712)
chr3 (139-194)||(23630035-23630091)
[»] scaffold0357 (1 HSPs)
scaffold0357 (1-140)||(6068-6207)
[»] scaffold0219 (1 HSPs)
scaffold0219 (1-132)||(25664-25795)
[»] chr4 (60 HSPs)
chr4 (1-140)||(38763115-38763254)
chr4 (13-140)||(7187637-7187763)
chr4 (141-244)||(3930431-3930533)
chr4 (139-244)||(16555768-16555873)
chr4 (133-195)||(22681567-22681629)
chr4 (141-195)||(13198905-13198960)
chr4 (141-195)||(35393775-35393829)
chr4 (141-194)||(56505693-56505747)
chr4 (1-102)||(12732552-12732652)
chr4 (141-194)||(26207361-26207414)
chr4 (141-195)||(16555515-16555570)
chr4 (141-195)||(18077201-18077256)
chr4 (132-194)||(11241661-11241723)
chr4 (141-194)||(50678779-50678833)
chr4 (138-195)||(3930176-3930233)
chr4 (142-195)||(8488481-8488534)
chr4 (138-194)||(32703650-32703707)
chr4 (138-194)||(36096475-36096532)
chr4 (139-195)||(27304716-27304771)
chr4 (139-194)||(50679424-50679480)
chr4 (141-198)||(8182168-8182227)
chr4 (7-134)||(18275154-18275280)
chr4 (145-195)||(49178815-49178866)
chr4 (163-244)||(13198626-13198707)
chr4 (141-194)||(24775783-24775837)
chr4 (141-194)||(28196346-28196400)
chr4 (141-194)||(28196773-28196827)
chr4 (141-194)||(36095817-36095871)
chr4 (139-193)||(48406386-48406440)
chr4 (139-195)||(11241387-11241444)
chr4 (141-194)||(23539841-23539893)
chr4 (142-194)||(25161879-25161932)
chr4 (160-193)||(39415244-39415277)
chr4 (139-194)||(4239366-4239422)
chr4 (141-192)||(22681881-22681933)
chr4 (134-181)||(49178526-49178574)
chr4 (140-191)||(7603422-7603473)
chr4 (142-195)||(8181992-8182047)
chr4 (141-191)||(9380744-9380795)
chr4 (146-195)||(27304892-27304943)
chr4 (1-76)||(50223856-50223931)
chr4 (158-193)||(54509116-54509151)
chr4 (141-194)||(5205988-5206042)
chr4 (140-193)||(5206231-5206284)
chr4 (141-194)||(9023244-9023298)
chr4 (141-194)||(9023680-9023734)
chr4 (141-194)||(9380307-9380361)
chr4 (141-194)||(26207746-26207800)
chr4 (141-194)||(32703225-32703279)
chr4 (141-194)||(39744465-39744519)
chr4 (141-194)||(43051252-43051306)
chr4 (162-192)||(47219203-47219233)
chr4 (138-194)||(169439-169496)
chr4 (142-195)||(7603146-7603198)
chr4 (142-194)||(11529169-11529222)
chr4 (141-193)||(25225399-25225452)
chr4 (141-194)||(48405962-48406015)
chr4 (141-194)||(169013-169068)
chr4 (212-244)||(11241641-11241673)
chr4 (146-192)||(16555695-16555743)
[»] chr6 (40 HSPs)
chr6 (1-139)||(29603899-29604037)
chr6 (10-140)||(33539936-33540066)
chr6 (141-244)||(3403940-3404043)
chr6 (141-244)||(21031979-21032081)
chr6 (136-190)||(30388057-30388111)
chr6 (1-102)||(22467798-22467899)
chr6 (11-100)||(32350492-32350581)
chr6 (10-134)||(25649599-25649723)
chr6 (133-194)||(3403709-3403771)
chr6 (141-194)||(10039676-10039729)
chr6 (1-140)||(15006342-15006482)
chr6 (144-195)||(3825530-3825581)
chr6 (141-195)||(18241854-18241909)
chr6 (139-231)||(11656746-11656838)
chr6 (141-195)||(13579650-13579704)
chr6 (160-244)||(18242107-18242190)
chr6 (141-198)||(33655111-33655168)
chr6 (138-194)||(33828987-33829044)
chr6 (158-244)||(30388315-30388398)
chr6 (144-190)||(31598732-31598778)
chr6 (141-194)||(33829636-33829690)
chr6 (141-189)||(21032285-21032334)
chr6 (141-194)||(29074372-29074425)
chr6 (141-194)||(29079136-29079189)
chr6 (141-194)||(29106945-29106998)
chr6 (141-193)||(31598274-31598326)
chr6 (139-195)||(33971992-33972048)
chr6 (138-194)||(22684358-22684414)
chr6 (138-194)||(22754654-22754710)
chr6 (157-239)||(2762500-2762581)
chr6 (146-195)||(2762611-2762662)
chr6 (146-195)||(10039842-10039893)
chr6 (140-194)||(10087858-10087913)
chr6 (140-194)||(33974299-33974354)
chr6 (141-194)||(7654548-7654602)
chr6 (146-195)||(12714436-12714486)
chr6 (141-195)||(23250592-23250646)
chr6 (141-195)||(23250891-23250945)
chr6 (161-193)||(11656535-11656567)
chr6 (2-58)||(23220116-23220172)
[»] scaffold0253 (2 HSPs)
scaffold0253 (3-102)||(9723-9822)
scaffold0253 (3-102)||(19148-19247)
[»] chr7 (68 HSPs)
chr7 (1-140)||(14939048-14939186)
chr7 (1-140)||(15366641-15366779)
chr7 (1-140)||(20587338-20587475)
chr7 (1-140)||(4437214-4437353)
chr7 (1-140)||(4444615-4444754)
chr7 (8-140)||(31499579-31499711)
chr7 (1-140)||(33558062-33558201)
chr7 (7-140)||(16921650-16921783)
chr7 (141-239)||(9412281-9412379)
chr7 (139-244)||(3687608-3687712)
chr7 (138-195)||(13772900-13772958)
chr7 (138-188)||(27096044-27096094)
chr7 (138-188)||(27182209-27182259)
chr7 (144-193)||(6908485-6908534)
chr7 (138-195)||(3687350-3687409)
chr7 (138-193)||(23686418-23686473)
chr7 (138-193)||(35079957-35080012)
chr7 (142-195)||(8953888-8953941)
chr7 (138-194)||(44599486-44599543)
chr7 (141-193)||(6908213-6908265)
chr7 (1-53)||(16381985-16382037)
chr7 (140-194)||(5349733-5349785)
chr7 (141-195)||(9412023-9412078)
chr7 (141-194)||(13772641-13772695)
chr7 (141-194)||(44600135-44600189)
chr7 (131-191)||(5735242-5735303)
chr7 (138-194)||(37888830-37888887)
chr7 (133-192)||(18925054-18925114)
chr7 (141-188)||(23686723-23686771)
chr7 (162-198)||(34235974-34236010)
chr7 (139-194)||(3204667-3204721)
chr7 (140-194)||(9035293-9035348)
chr7 (141-194)||(10533034-10533088)
chr7 (141-194)||(13863313-13863367)
chr7 (141-194)||(37889259-37889313)
chr7 (141-194)||(37972396-37972450)
chr7 (140-194)||(48359319-48359373)
chr7 (141-194)||(13744233-13744286)
chr7 (142-194)||(18925322-18925373)
chr7 (143-195)||(33628397-33628449)
chr7 (141-195)||(9034867-9034922)
chr7 (141-192)||(18864404-18864455)
chr7 (144-194)||(20418891-20418942)
chr7 (144-195)||(27096341-27096392)
chr7 (144-195)||(27181911-27181962)
chr7 (144-195)||(42419028-42419079)
chr7 (141-194)||(3205093-3205147)
chr7 (141-194)||(8643766-8643820)
chr7 (141-186)||(13863964-13864010)
chr7 (141-194)||(17156967-17157021)
chr7 (141-194)||(20419324-20419378)
chr7 (141-194)||(22740156-22740210)
chr7 (144-194)||(22740591-22740641)
chr7 (138-195)||(29291803-29291861)
chr7 (138-195)||(29292040-29292098)
chr7 (141-190)||(29292922-29292972)
chr7 (138-191)||(29293349-29293403)
chr7 (141-194)||(33628660-33628714)
chr7 (142-198)||(39983700-39983757)
chr7 (158-193)||(6908391-6908427)
chr7 (7-102)||(9609613-9609707)
chr7 (7-102)||(9837185-9837279)
chr7 (139-194)||(13741555-13741611)
chr7 (73-140)||(34242908-34242976)
chr7 (158-194)||(35080223-35080259)
chr7 (145-192)||(38191387-38191435)
chr7 (141-188)||(42418591-42418639)
chr7 (34-102)||(48345957-48346025)
[»] scaffold0327 (1 HSPs)
scaffold0327 (4-140)||(6586-6722)
[»] scaffold0387 (1 HSPs)
scaffold0387 (1-134)||(2730-2863)
[»] scaffold0174 (1 HSPs)
scaffold0174 (1-138)||(918-1055)
[»] scaffold0138 (1 HSPs)
scaffold0138 (4-140)||(21558-21694)
[»] chr2 (54 HSPs)
chr2 (1-140)||(24868880-24869019)
chr2 (141-244)||(30190923-30191026)
chr2 (141-239)||(24832331-24832429)
chr2 (138-195)||(11883925-11883983)
chr2 (144-244)||(40469680-40469780)
chr2 (141-239)||(11883623-11883721)
chr2 (8-140)||(25132549-25132681)
chr2 (139-192)||(6171154-6171207)
chr2 (141-244)||(20347415-20347518)
chr2 (138-195)||(43495604-43495661)
chr2 (133-195)||(30191224-30191287)
chr2 (141-244)||(6171408-6171510)
chr2 (138-194)||(26737781-26737838)
chr2 (139-192)||(40221311-40221364)
chr2 (143-195)||(18055050-18055101)
chr2 (50-102)||(30994734-30994786)
chr2 (144-195)||(32673142-32673193)
chr2 (141-194)||(2639482-2639536)
chr2 (141-194)||(18296693-18296747)
chr2 (141-195)||(26737482-26737535)
chr2 (141-194)||(26841587-26841641)
chr2 (138-195)||(40469424-40469482)
chr2 (138-194)||(17850975-17851032)
chr2 (138-194)||(26842238-26842295)
chr2 (142-194)||(16911269-16911321)
chr2 (141-192)||(17346037-17346088)
chr2 (141-194)||(2638820-2638874)
chr2 (141-194)||(5378661-5378715)
chr2 (141-194)||(20347163-20347217)
chr2 (141-194)||(37720204-37720258)
chr2 (141-194)||(41790912-41790966)
chr2 (138-194)||(7591850-7591907)
chr2 (141-194)||(7980003-7980056)
chr2 (154-195)||(15920792-15920833)
chr2 (142-194)||(18296077-18296130)
chr2 (141-192)||(6495723-6495775)
chr2 (154-194)||(7591215-7591255)
chr2 (144-195)||(43495483-43495535)
chr2 (144-194)||(8851151-8851202)
chr2 (143-237)||(15321394-15321486)
chr2 (144-195)||(17345736-17345786)
chr2 (141-187)||(43495309-43495356)
chr2 (141-194)||(5379959-5380013)
chr2 (133-194)||(7664673-7664735)
chr2 (141-194)||(8851582-8851636)
chr2 (137-194)||(26692820-26692878)
chr2 (140-190)||(38490845-38490895)
chr2 (137-190)||(19141853-19141905)
chr2 (146-193)||(26737657-26737706)
chr2 (158-194)||(40221488-40221525)
chr2 (142-193)||(6495468-6495519)
chr2 (142-194)||(18750126-18750178)
chr2 (138-193)||(32672839-32672895)
chr2 (146-192)||(40469607-40469655)
[»] scaffold0319 (2 HSPs)
scaffold0319 (140-244)||(6648-6751)
scaffold0319 (141-195)||(6394-6449)
[»] scaffold0110 (2 HSPs)
scaffold0110 (135-244)||(45758-45866)
scaffold0110 (141-191)||(45537-45587)
[»] scaffold0192 (1 HSPs)
scaffold0192 (141-237)||(25327-25423)
[»] scaffold0802 (2 HSPs)
scaffold0802 (139-244)||(1371-1476)
scaffold0802 (139-195)||(1116-1173)
[»] scaffold0442 (1 HSPs)
scaffold0442 (1-140)||(1671-1810)
[»] scaffold0001 (4 HSPs)
scaffold0001 (138-195)||(438927-438985)
scaffold0001 (141-195)||(183662-183716)
scaffold0001 (141-195)||(439198-439253)
scaffold0001 (144-193)||(183367-183416)
[»] scaffold0015 (2 HSPs)
scaffold0015 (139-192)||(17158-17211)
scaffold0015 (139-195)||(16851-16906)
[»] scaffold0047 (1 HSPs)
scaffold0047 (7-107)||(1827-1927)
[»] scaffold0376 (2 HSPs)
scaffold0376 (140-195)||(7599-7654)
scaffold0376 (141-194)||(7455-7508)
[»] scaffold0009 (1 HSPs)
scaffold0009 (141-195)||(205687-205741)
[»] scaffold0002 (1 HSPs)
scaffold0002 (141-195)||(411923-411977)
[»] scaffold0069 (1 HSPs)
scaffold0069 (138-195)||(50506-50563)
[»] scaffold0175 (1 HSPs)
scaffold0175 (13-105)||(6897-6989)
[»] scaffold0598 (2 HSPs)
scaffold0598 (142-193)||(6877-6927)
scaffold0598 (143-192)||(6609-6659)
[»] scaffold0107 (1 HSPs)
scaffold0107 (11-102)||(11806-11897)
[»] scaffold1221 (2 HSPs)
scaffold1221 (138-194)||(1508-1564)
scaffold1221 (144-192)||(1786-1834)
[»] scaffold0460 (1 HSPs)
scaffold0460 (138-194)||(763-819)
[»] scaffold0328 (2 HSPs)
scaffold0328 (139-194)||(6150-6206)
scaffold0328 (141-194)||(6795-6849)
[»] scaffold0006 (1 HSPs)
scaffold0006 (7-134)||(199074-199199)
[»] scaffold0017 (1 HSPs)
scaffold0017 (139-194)||(185274-185330)
[»] scaffold0088 (1 HSPs)
scaffold0088 (1-76)||(45296-45371)
[»] scaffold0010 (1 HSPs)
scaffold0010 (7-102)||(29474-29569)
[»] scaffold0535 (1 HSPs)
scaffold0535 (141-190)||(10012-10062)
[»] scaffold0041 (1 HSPs)
scaffold0041 (141-194)||(38695-38749)
[»] scaffold0176 (1 HSPs)
scaffold0176 (141-194)||(19621-19674)


Alignment Details
Target: chr8 (Bit Score: 116; Significance: 4e-59; HSPs: 60)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 24266474 - 24266335
Alignment:
Q  1 tgataattgttgatgataagtgtgcttgatgactacttgatcgtgatatttgggattgttatgtgaatgtgtatattgaattaactatttatgtgaagta 100  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  24266474 tgataattgttgatgataagtgtgcttggtgagtacttgatcgtgatatttgggattgttatgtgaatgtgtatattgaattaactgtttatgtgaagta 24266375  T
Q  101 ctcgaaaaagattttaattcatatatgctcaaatttattt 140  Q
    |||| ||  |||||||||||||||||||||||||||||||    
T  24266374 ctcggaattgattttaattcatatatgctcaaatttattt 24266335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 139 - 244
Target Start/End: Complemental strand, 41662459 - 41662354
Alignment:
Q  139 ttggcttaattgcacttt-cccccctatcttttgctaattgtgcgattttgcacccccctcnnnnnnnnngagcgattttgcaccccatctttttgcccc 237  Q
    |||||||||||||||||| |||||||||||||||| |||||||||||||||||| ||||||         ||||||||||||||||||||||||||||||    
T  41662459 ttggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcac-cccctcttttttattgagcgattttgcaccccatctttttgcccc 41662361  T
Q  238 ctctctg 244  Q
    || ||||    
T  41662360 ctttctg 41662354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 139 - 244
Target Start/End: Original strand, 43245869 - 43245974
Alignment:
Q  139 ttggcttaattgcactttc-ccccctatcttttgctaattgtgcgattttgcacccccctcnnnnnnnnngagcgattttgcaccccatctttttgcccc 237  Q
    ||||||||||||||||||  |||||||||||||| |||||||||||||||||| |||||||         ||||||||||||||||||||||||||||||    
T  43245869 ttggcttaattgcactttttccccctatcttttgataattgtgcgattttgca-ccccctcttttttattgagcgattttgcaccccatctttttgcccc 43245967  T
Q  238 ctctctg 244  Q
    || ||||    
T  43245968 ctttctg 43245974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 143 - 239
Target Start/End: Original strand, 765736 - 765832
Alignment:
Q  143 cttaattgcacttt-cccccctatcttttgctaattgtgcgattttgcacccccctcnnnnnnnnngagcgattttgcaccccatctttttgccccct 239  Q
    |||||||||||||| |||||||||||||||| ||||||||||||||||| |||||||         ||||||||||||||||||||||||||||||||    
T  765736 cttaattgcacttttcccccctatcttttgccaattgtgcgattttgca-ccccctctttttttttgagcgattttgcaccccatctttttgccccct 765832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 141 - 239
Target Start/End: Original strand, 12281124 - 12281222
Alignment:
Q  141 ggcttaattgcacttt-cccccctatcttttgctaattgtgcgattttgcacccccctcnnnnnnnnngagcgattttgcaccccatctttttgccccct 239  Q
    |||||||||||||||| |||||||||||||||| ||||||||||||||||| || ||||         ||||||||||||||||||||||||||||||||    
T  12281124 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgca-cctcctctttttttttgagcgattttgcaccccatctttttgccccct 12281222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 139 - 244
Target Start/End: Complemental strand, 15156241 - 15156136
Alignment:
Q  139 ttggcttaattgcacttt-cccccctatcttttgctaattgtgcgattttgcacccccctcnnnnnnnnngagcgattttgcaccccatctttttgcccc 237  Q
    |||||||||||||||||| |||||||||||||||  |||||||||||||||||| ||||||          |||||||||||||||||||||||||||||    
T  15156241 ttggcttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcac-cccctcttttttttttagcgattttgcaccccatctttttgcccc 15156143  T
Q  238 ctctctg 244  Q
    || ||||    
T  15156142 ctttctg 15156136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 141 - 195
Target Start/End: Original strand, 16928942 - 16928997
Alignment:
Q  141 ggcttaattgcactttcccc-cctatcttttgctaattgtgcgattttgcaccccc 195  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  16928942 ggcttaattgcactttccccccctatcttttgctaattgtgcgattttgcaccccc 16928997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 24554266 - 24554405
Alignment:
Q  1 tgataattgttgatgataagtgtgcttgatgactacttgatcgtgatatttgggattgttatgtgaatgtgtatattgaattaactatttatgtgaagta 100  Q
    |||||||| ||||||||||||||| ||| ||| |||||  ||||||||||||| |||| |||||||| |||||||||||||| | |  |||||| |||||    
T  24554266 tgataattattgatgataagtgtgtttggtgagtacttattcgtgatatttggaattgctatgtgaaggtgtatattgaattgaatgcttatgttaagta 24554365  T
Q  101 ctcgaaaaagattttaattcatatatgctcaaatttattt 140  Q
    || | ||     ||||||||| ||||| ||||||||||||    
T  24554366 cttggaacttgatttaattcaaatatgttcaaatttattt 24554405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 7468772 - 7468694
Alignment:
Q  4 taattgttgatgataagtgtgcttgatgactacttgatcgtgatatttgggattgttatgtgaatgtgtatattgaatt 82  Q
    ||||||||||||||||||||||||| ||| |||||  ||||||||||||  |||| |||||||| ||||||||||||||    
T  7468772 taattgttgatgataagtgtgcttggtgagtacttattcgtgatatttgaaattgctatgtgaaggtgtatattgaatt 7468694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 138 - 195
Target Start/End: Complemental strand, 37752473 - 37752415
Alignment:
Q  138 tttggcttaattgcacttt-cccccctatcttttgctaattgtgcgattttgcaccccc 195  Q
    ||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  37752473 tttggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgcaccccc 37752415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 139 - 195
Target Start/End: Complemental strand, 16929298 - 16929241
Alignment:
Q  139 ttggcttaattgcactttcc-cccctatcttttgctaattgtgcgattttgcaccccc 195  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||||||||||||    
T  16929298 ttggcttaattgcacttttctcccctatcttttgctaattgtgcgattttgcaccccc 16929241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 139 - 194
Target Start/End: Original strand, 37752082 - 37752138
Alignment:
Q  139 ttggcttaattgcacttt-cccccctatcttttgctaattgtgcgattttgcacccc 194  Q
    |||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||    
T  37752082 ttggcttaattgcacttttcccccctatgttttgctaattgtgcgattttgcacccc 37752138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 136 - 192
Target Start/End: Original strand, 43162229 - 43162285
Alignment:
Q  136 tatttggcttaattgcactttcccccctatcttttgctaattgtgcgattttgcacc 192  Q
    ||||||||||||||||||||| |||||||| ||||| ||||||||||||||||||||    
T  43162229 tatttggcttaattgcacttttccccctatattttgttaattgtgcgattttgcacc 43162285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 141 - 195
Target Start/End: Original strand, 15155883 - 15155938
Alignment:
Q  141 ggcttaattgcacttt-cccccctatcttttgctaattgtgcgattttgcaccccc 195  Q
    |||||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  15155883 ggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgcaccccc 15155938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 29296355 - 29296280
Alignment:
Q  1 tgataattgttgatgataagtgtgcttgatgactacttgatcgtgatatttgggattgttatgtgaatgtgtatat 76  Q
    |||||||||| ||||||||||||| ||| ||| ||||| |||||| |||||||||||||||  |||||||||||||    
T  29296355 tgataattgtggatgataagtgtgattggtgaatacttaatcgtgttatttgggattgttacatgaatgtgtatat 29296280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 141 - 195
Target Start/End: Complemental strand, 43246230 - 43246175
Alignment:
Q  141 ggcttaattgcacttt-cccccctatcttttgctaattgtgcgattttgcaccccc 195  Q
    |||||||||||||||| |||||||||||||||||||||||| ||||||||||||||    
T  43246230 ggcttaattgcacttttcccccctatcttttgctaattgtgtgattttgcaccccc 43246175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 138 - 195
Target Start/End: Complemental strand, 12281483 - 12281425
Alignment:
Q  138 tttggcttaattgcactttcccccct-atcttttgctaattgtgcgattttgcaccccc 195  Q
    ||||||||||||||||||| |||||| |||||||| |||||||||||||||||||||||    
T  12281483 tttggcttaattgcacttttcccccttatcttttgttaattgtgcgattttgcaccccc 12281425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 141 - 194
Target Start/End: Original strand, 13936723 - 13936776
Alignment:
Q  141 ggcttaattgcactttcccccctatcttttgctaattgtgcgattttgcacccc 194  Q
    |||||||||||||||| ||||||||||||| | |||||||||||||||||||||    
T  13936723 ggcttaattgcacttttccccctatcttttaccaattgtgcgattttgcacccc 13936776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 138 - 195
Target Start/End: Original strand, 34313762 - 34313818
Alignment:
Q  138 tttggcttaattgcactttcccccctatcttttgctaattgtgcgattttgcaccccc 195  Q
    ||||||||||||||||||| |||| ||||||||| |||||||||||||||||||||||    
T  34313762 tttggcttaattgcacttttcccc-tatcttttgttaattgtgcgattttgcaccccc 34313818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 138 - 194
Target Start/End: Complemental strand, 39724105 - 39724048
Alignment:
Q  138 tttggcttaattgcactttcc-cccctatcttttgctaattgtgcgattttgcacccc 194  Q
    ||||||||||||||||||| | |||||||||||||| |||||||||||||||||||||    
T  39724105 tttggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacccc 39724048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 139 - 237
Target Start/End: Complemental strand, 3464001 - 3463903
Alignment:
Q  139 ttggcttaattgcacttt-cccccctatcttttgctaattgtgcgattttgcacccccctcnnnnnnnnngagcgattttgcaccccatctttttgcccc 237  Q
    |||||||||||||||||| ||||||||| |||||||||||||||||| ||||| ||| |||         ||||||||||||||||||||||||| ||||    
T  3464001 ttggcttaattgcacttttcccccctatattttgctaattgtgcgatcttgca-ccctctcctttgttttgagcgattttgcaccccatctttttacccc 3463903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 143 - 195
Target Start/End: Complemental strand, 23123567 - 23123516
Alignment:
Q  143 cttaattgcactttcccccctatcttttgctaattgtgcgattttgcaccccc 195  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||||    
T  23123567 cttaattgcactttcccct-tatcttttgctaattgtgcgattttgcaccccc 23123516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 99
Target Start/End: Complemental strand, 26009897 - 26009805
Alignment:
Q  7 ttgttgatgataagtgtgcttgatgactacttgatcgtgatatttgggattgttatgtgaatgtgtatattgaattaactatttatgtgaagt 99  Q
    ||||||||||||||||| |||| ||| |||||| ||||  ||||| ||| |||||||| || ||  |||||||||||||||||||||| ||||    
T  26009897 ttgttgatgataagtgtacttggtgaatacttggtcgtattattttggaatgttatgtaaaggtacatattgaattaactatttatgttaagt 26009805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 143 - 194
Target Start/End: Original strand, 74688 - 74739
Alignment:
Q  143 cttaattgcactttcccccctatcttttgctaattgtgcgattttgcacccc 194  Q
    |||||||||||||| ||| | |||||||||||||||||||||||||||||||    
T  74688 cttaattgcacttttccctccatcttttgctaattgtgcgattttgcacccc 74739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 148 - 195
Target Start/End: Original strand, 7127660 - 7127707
Alignment:
Q  148 ttgcactttcccccctatcttttgctaattgtgcgattttgcaccccc 195  Q
    ||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  7127660 ttgcacttttccccctatcttttgctaattgtgcgattttgcatcccc 7127707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 141 - 194
Target Start/End: Complemental strand, 9823415 - 9823361
Alignment:
Q  141 ggcttaattgcactttcc-cccctatcttttgctaattgtgcgattttgcacccc 194  Q
    |||||||||||||||| | |||||||||||||| |||||||||||||||||||||    
T  9823415 ggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacccc 9823361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 138 - 194
Target Start/End: Complemental strand, 13027338 - 13027281
Alignment:
Q  138 tttggcttaattgcactttcc-cccctatcttttgctaattgtgcgattttgcacccc 194  Q
    ||||| ||||||||||||| | |||||||||||||| |||||||||||||||||||||    
T  13027338 tttggtttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacccc 13027281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 138 - 194
Target Start/End: Original strand, 22851387 - 22851444
Alignment:
Q  138 tttggcttaattgcactttcc-cccctatcttttgctaattgtgcgattttgcacccc 194  Q
    ||||||||||||||||||| | |||||||||||||  |||||||||||||||||||||    
T  22851387 tttggcttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcacccc 22851444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 141 - 192
Target Start/End: Original strand, 13026635 - 13026687
Alignment:
Q  141 ggcttaattgcactttcc-cccctatcttttgctaattgtgcgattttgcacc 192  Q
    |||||||||||||||| | |||||||||||||| |||||||||||||||||||    
T  13026635 ggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacc 13026687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 162 - 244
Target Start/End: Complemental strand, 75016 - 74936
Alignment:
Q  162 ctatcttttgctaattgtgcgattttgcacccccctcnnnnnnnnngagcgattttgcaccccatctttttgccccctctctg 244  Q
    |||||||||||||||||||||||||||||| ||||||          ||||||||||||||||||||||||||||||| ||||    
T  75016 ctatcttttgctaattgtgcgattttgcac-cccctcttttttttt-agcgattttgcaccccatctttttgccccctttctg 74936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 134
Target Start/End: Complemental strand, 5851970 - 5851844
Alignment:
Q  7 ttgttgatgataagtgtgcttgatgactacttgatcgtgatatttgggattgttatgtgaatgtgtatattgaattaactatttatgtgaagtactcgaa 106  Q
    |||||||||||||||||||||| ||| ||||||| |||  ||||| ||| |||||||| |||||  |||||| |||| |  ||||||| |||| || | |    
T  5851970 ttgttgatgataagtgtgcttggtgaatacttgaccgtattattttggaatgttatgtaaatgtacatattggattatccgtttatgttaagtgcttgta 5851871  T
Q  107 aaagattttaattcatatatgctcaaat 134  Q
    |  || ||||| ||||||||||||||||    
T  5851870 attga-tttaactcatatatgctcaaat 5851844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 191
Target Start/End: Complemental strand, 9930885 - 9930842
Alignment:
Q  148 ttgcactttcccccctatcttttgctaattgtgcgattttgcac 191  Q
    |||||||||||||| ||||||||| |||||||||||||||||||    
T  9930885 ttgcactttcccccttatcttttgttaattgtgcgattttgcac 9930842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 195
Target Start/End: Original strand, 41662107 - 41662162
Alignment:
Q  141 ggcttaattgcac-tttcccccctatcttttgctaattgtgcgattttgcaccccc 195  Q
    ||||||||||||| ||| |||| ||||||||| |||||||||||||||||||||||    
T  41662107 ggcttaattgcacattttccccatatcttttgttaattgtgcgattttgcaccccc 41662162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 144 - 193
Target Start/End: Original strand, 15042148 - 15042198
Alignment:
Q  144 ttaattgcactttcccccct-atcttttgctaattgtgcgattttgcaccc 193  Q
    |||||||||||||||||||| ||||||||| ||||||| ||||||||||||    
T  15042148 ttaattgcactttccccccttatcttttgccaattgtgtgattttgcaccc 15042198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 141 - 195
Target Start/End: Complemental strand, 18020140 - 18020087
Alignment:
Q  141 ggcttaattgcactttcccccctatcttttgctaattgtgcgattttgcaccccc 195  Q
    ||||||||||||||||  ||| ||||||||| |||||||||||||||||||||||    
T  18020140 ggcttaattgcacttttaccc-tatcttttgttaattgtgcgattttgcaccccc 18020087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 141 - 194
Target Start/End: Complemental strand, 34498609 - 34498555
Alignment:
Q  141 ggcttaattgcacttt-cccccctatcttttgctaattgtgcgattttgcacccc 194  Q
    |||||||||||||||| |||||||||  ||||| |||||||||||||||||||||    
T  34498609 ggcttaattgcacttttcccccctatagtttgcaaattgtgcgattttgcacccc 34498555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 145 - 195
Target Start/End: Complemental strand, 43162588 - 43162538
Alignment:
Q  145 taattgcactttcccccctatcttttgctaattgtgcgattttgcaccccc 195  Q
    |||||||||||| ||||||||||||||  ||| ||||||||||||||||||    
T  43162588 taattgcacttttccccctatcttttgtcaatcgtgcgattttgcaccccc 43162538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 159 - 193
Target Start/End: Complemental strand, 43598790 - 43598756
Alignment:
Q  159 cccctatcttttgctaattgtgcgattttgcaccc 193  Q
    |||||||||||||||||||||||||||||||||||    
T  43598790 cccctatcttttgctaattgtgcgattttgcaccc 43598756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 138 - 194
Target Start/End: Original strand, 9822745 - 9822802
Alignment:
Q  138 tttggcttaattgcactttcc-cccctatcttttgctaattgtgcgattttgcacccc 194  Q
    ||||||||||||||||||| | ||||||||||||   |||||||||||||||||||||    
T  9822745 tttggcttaattgcacttttcacccctatcttttatcaattgtgcgattttgcacccc 9822802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 138 - 194
Target Start/End: Original strand, 23123335 - 23123392
Alignment:
Q  138 tttggcttaattgcactttcccc-cctatcttttgctaattgtgcgattttgcacccc 194  Q
    ||||||||||||||||||| ||| |||||||||||  |||||||||||||| ||||||    
T  23123335 tttggcttaattgcacttttccctcctatcttttgtcaattgtgcgattttacacccc 23123392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 138 - 194
Target Start/End: Original strand, 25438789 - 25438846
Alignment:
Q  138 tttggcttaattgcacttt-cccccctatcttttgctaattgtgcgattttgcacccc 194  Q
    |||| |||||||||||||| |||||||||  ||||| |||||||||||||||||||||    
T  25438789 tttgacttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 25438846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 138 - 194
Target Start/End: Complemental strand, 37397202 - 37397145
Alignment:
Q  138 tttggcttaattgcacttt-cccccctatcttttgctaattgtgcgattttgcacccc 194  Q
    ||||||||||||||||||| |||||||||  ||||| |||||||||||||||| ||||    
T  37397202 tttggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcccccc 37397145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 191
Target Start/End: Original strand, 11007561 - 11007613
Alignment:
Q  139 ttggcttaattgcactttcccccctatcttttgctaattgtgcgattttgcac 191  Q
    ||||||||||| || ||| ||  ||||||||||||||||||||||||||||||    
T  11007561 ttggcttaattacatttttcctgctatcttttgctaattgtgcgattttgcac 11007613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 208 - 244
Target Start/End: Original strand, 37752181 - 37752217
Alignment:
Q  208 gagcgattttgcaccccatctttttgccccctctctg 244  Q
    |||||||||||||||||||||||||||||||| ||||    
T  37752181 gagcgattttgcaccccatctttttgccccctttctg 37752217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 141 - 180
Target Start/End: Complemental strand, 767759 - 767720
Alignment:
Q  141 ggcttaattgcactttcccccctatcttttgctaattgtg 180  Q
    |||||||||||||||| |||||||||||||| ||||||||    
T  767759 ggcttaattgcacttttccccctatcttttgttaattgtg 767720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 160 - 195
Target Start/End: Complemental strand, 9465908 - 9465873
Alignment:
Q  160 ccctatcttttgctaattgtgcgattttgcaccccc 195  Q
    |||||||||||| |||||||||||||||||||||||    
T  9465908 ccctatcttttgttaattgtgcgattttgcaccccc 9465873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 193
Target Start/End: Complemental strand, 7127973 - 7127923
Alignment:
Q  144 ttaattgcactttcccccctatcttttgctaa-ttgtgcgattttgcaccc 193  Q
    |||||||||||||   |||||||||||||||| ||||||||||||||||||    
T  7127973 ttaattgcacttttttccctatcttttgctaatttgtgcgattttgcaccc 7127923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 194
Target Start/End: Complemental strand, 13937443 - 13937389
Alignment:
Q  141 ggcttaattgcacttt-cccccctatcttttgctaattgtgcgattttgcacccc 194  Q
    |||||||||||||||| ||||||||| |||||  |||||||||| ||||||||||    
T  13937443 ggcttaattgcacttttcccccctattttttgtcaattgtgcgaatttgcacccc 13937389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 194
Target Start/End: Original strand, 37396708 - 37396762
Alignment:
Q  141 ggcttaattgcacttt-cccccctatcttttgctaattgtgcgattttgcacccc 194  Q
    |||||||||||||||| |||||||||  |||||  ||||||||||||||||||||    
T  37396708 ggcttaattgcacttttcccccctatagtttgccgattgtgcgattttgcacccc 37396762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 138 - 190
Target Start/End: Original strand, 3307335 - 3307388
Alignment:
Q  138 tttggcttaattgcactttcc-cccctatcttttgctaattgtgcgattttgca 190  Q
    ||||||||||||||| ||| | |||||||||||||  |||||||||||||||||    
T  3307335 tttggcttaattgcatttttcacccctatcttttgtcaattgtgcgattttgca 3307388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 141 - 194
Target Start/End: Original strand, 3463642 - 3463694
Alignment:
Q  141 ggcttaattgcactttcccccctatcttttgctaattgtgcgattttgcacccc 194  Q
    ||||||||| || ||||||| |||||||||| ||||||||| ||||||||||||    
T  3463642 ggcttaattacattttcccc-ctatcttttgttaattgtgcaattttgcacccc 3463694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 141 - 190
Target Start/End: Original strand, 6092777 - 6092825
Alignment:
Q  141 ggcttaattgcactttcccccctatcttttgctaattgtgcgattttgca 190  Q
    |||||||||||| ||||||| ||||||||||  |||||||||||||||||    
T  6092777 ggcttaattgcattttcccc-ctatcttttgtcaattgtgcgattttgca 6092825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 134 - 194
Target Start/End: Original strand, 9623495 - 9623556
Alignment:
Q  134 tttatttggcttaattgcactttccccc-ctatcttttgctaattgtgcgattttgcacccc 194  Q
    |||||||||||||||||||||||  | | ||||  ||||| |||||||||||||||||||||    
T  9623495 tttatttggcttaattgcactttttctcactatagtttgccaattgtgcgattttgcacccc 9623556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 144 - 192
Target Start/End: Original strand, 22786843 - 22786892
Alignment:
Q  144 ttaattgcactttc-ccccctatcttttgctaattgtgcgattttgcacc 192  Q
    |||||||||||||  ||||||||||||| ||||||||| |||||||||||    
T  22786843 ttaattgcactttttccccctatcttttactaattgtgtgattttgcacc 22786892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 138 - 194
Target Start/End: Original strand, 24473340 - 24473397
Alignment:
Q  138 tttggcttaattgcactttc-ccccctatcttttgctaattgtgcgattttgcacccc 194  Q
    |||||||||||||||||||  ||||||||  ||||| ||||||| |||||||||||||    
T  24473340 tttggcttaattgcactttttccccctatagtttgccaattgtgtgattttgcacccc 24473397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 141 - 190
Target Start/End: Original strand, 33747984 - 33748033
Alignment:
Q  141 ggcttaattgcactttcccccctatcttttgctaattgtgcgattttgca 190  Q
    ||||||||||||||||   || |||||||||||||||||| |||||||||    
T  33747984 ggcttaattgcacttttttccatatcttttgctaattgtgtgattttgca 33748033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 192
Target Start/End: Complemental strand, 22851990 - 22851958
Alignment:
Q  160 ccctatcttttgctaattgtgcgattttgcacc 192  Q
    ||||||||||||| |||||||||||||||||||    
T  22851990 ccctatcttttgccaattgtgcgattttgcacc 22851958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 195
Target Start/End: Complemental strand, 33748187 - 33748159
Alignment:
Q  167 ttttgctaattgtgcgattttgcaccccc 195  Q
    |||||||||||||||||||||||||||||    
T  33748187 ttttgctaattgtgcgattttgcaccccc 33748159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 195
Target Start/End: Complemental strand, 37670306 - 37670255
Alignment:
Q  143 cttaattgcactttcccccctatcttttgctaattgtgcgattttgcaccccc 195  Q
    |||||||||||||| | |||||||||| | ||||||||| |||||||||||||    
T  37670306 cttaattgcacttttctccctatcttt-gttaattgtgcaattttgcaccccc 37670255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 192
Target Start/End: Original strand, 41662521 - 41662573
Alignment:
Q  141 ggcttaattgcactttcccccc-tatcttttgctaattgtgcgattttgcacc 192  Q
    |||||||||||||||| ||||| |||  ||||| |||||||||||||||||||    
T  41662521 ggcttaattgcacttttcccccatatagtttgccaattgtgcgattttgcacc 41662573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 112; Significance: 1e-56; HSPs: 57)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 46144243 - 46144104
Alignment:
Q  1 tgataattgttgatgataagtgtgcttgatgactacttgatcgtgatatttgggattgttatgtgaatgtgtatattgaattaactatttatgtgaagta 100  Q
    |||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||    
T  46144243 tgataattgttgatgataagtgtgcttgatgagtatttgatcgtgatatttgggattgttatgtgaatgtgtatattgaattaattgtttatgtgaagta 46144144  T
Q  101 ctcgaaaaagattttaattcatatatgctcaaatttattt 140  Q
    |||| ||  |||||||||||||||||||||||||||||||    
T  46144143 ctcggaattgattttaattcatatatgctcaaatttattt 46144104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 29217573 - 29217434
Alignment:
Q  1 tgataattgttgatgataagtgtgcttgatgactacttgatcgtgatatttgggattgttatgtgaatgtgtatattgaattaactatttatgtgaagta 100  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| |||||    
T  29217573 tgataattgttgatgataagtgtgcttggtgagtacttgatcgtgatatttgagattgttatgtgaatgtgtatattgaattaactgtttatgttaagta 29217474  T
Q  101 ctcgaaaaagattttaattcatatatgctcaaatttattt 140  Q
    |||| ||     |||||||||||||| |||||| ||||||    
T  29217473 ctcggaatttgatttaattcatatatactcaaacttattt 29217434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 49999041 - 49999181
Alignment:
Q  1 tgataattgttgatgataagtgtgcttgatgactacttgatcgtgatatttggg-attgttatgtgaatgtgtatattgaattaactatttatgtgaagt 99  Q
    ||||| |||||||||||||||||| ||| ||| ||||||||||||||||||||| |||||||||| ||| ||||||||||||||||| ||||||||||||    
T  49999041 tgatatttgttgatgataagtgtgtttggtgagtacttgatcgtgatatttggggattgttatgtaaatatgtatattgaattaactgtttatgtgaagt 49999140  T
Q  100 actcgaaaaagattttaattcatatatgctcaaatttattt 140  Q
    ||||| ||  ||||| ||||||||| |||||||||||||||    
T  49999141 actcggaattgatttcaattcatatgtgctcaaatttattt 49999181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 52398139 - 52398000
Alignment:
Q  1 tgataattgttgatgataagtgtgcttgatgactacttgatcgtgatatttgggattgttatgtgaatgtgtatattgaattaactatttatgtgaagta 100  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||||||||| |||||||||| ||| |||||||||||||||||  ||||||| |||||    
T  52398139 tgataattgttgatgataagtgtgcttggtgagtacttgatcgtgatatttgagattgttatgcgaacgtgtatattgaattaaccgtttatgttaagta 52398040  T
Q  101 ctcgaaaaagattttaattcatatatgctcaaatttattt 140  Q
    || | ||     ||||||||||||||||||||||||||||    
T  52398039 cttggaatttgatttaattcatatatgctcaaatttattt 52398000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 141 - 244
Target Start/End: Original strand, 47955306 - 47955409
Alignment:
Q  141 ggcttaattgcacttt-cccccctatcttttgctaattgtgcgattttgcacccccctcnnnnnnnnngagcgattttgcaccccatctttttgccccct 239  Q
    |||||||||||||||| |||||||||||||||| ||||||||||||||||| |||||||         ||||||||||||||||||||||||||||||||    
T  47955306 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgca-ccccctctttttttttgagcgattttgcaccccatctttttgccccct 47955404  T
Q  240 ctctg 244  Q
     ||||    
T  47955405 ttctg 47955409  T

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Target: chr1; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 141 - 195
Target Start/End: Complemental strand, 13589712 - 13589658
Alignment:
Q  141 ggcttaattgcactttcccccctatcttttgctaattgtgcgattttgcaccccc 195  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  13589712 ggcttaattgcacttttccccctatcttttgctaattgtgcgattttgcaccccc 13589658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 40437979 - 40438080
Alignment:
Q  1 tgataattgttgatgataagtgtgcttgatgactacttgatcgtgatatttgggattgttatgtgaatgtgtatattgaattaactatttatgtgaagta 100  Q
    |||| ||| ||||||||||||||||||||||| ||||   ||||||||||||| ||||||||||||| ||||||| |||||||| |  |||||| |||||    
T  40437979 tgatgattattgatgataagtgtgcttgatgagtactcattcgtgatatttggaattgttatgtgaaagtgtataatgaattaaatgcttatgttaagta 40438078  T
Q  101 ct 102  Q
    ||    
T  40438079 ct 40438080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 140 - 190
Target Start/End: Original strand, 1176716 - 1176766
Alignment:
Q  140 tggcttaattgcactttcccccctatcttttgctaattgtgcgattttgca 190  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  1176716 tggcttaattgcactttcccccctatattttgctaattgtgcgattttgca 1176766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 138 - 195
Target Start/End: Complemental strand, 17518658 - 17518601
Alignment:
Q  138 tttggcttaattgcactttcccccctatcttttgctaattgtgcgattttgcaccccc 195  Q
    |||| |||||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  17518658 tttgacttaattgcacttttccccctatcttttgccaattgtgcgattttgcaccccc 17518601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 134 - 190
Target Start/End: Complemental strand, 49318226 - 49318170
Alignment:
Q  134 tttatttggcttaattgcactttcccccctatcttttgctaattgtgcgattttgca 190  Q
    ||||||||||||||||||||||||||||||||  ||||| |||||||||||||||||    
T  49318226 tttatttggcttaattgcactttcccccctatagtttgccaattgtgcgattttgca 49318170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 141 - 194
Target Start/End: Complemental strand, 8109047 - 8108993
Alignment:
Q  141 ggcttaattgcacttt-cccccctatcttttgctaattgtgcgattttgcacccc 194  Q
    |||||||||||||||| |||||||||||||||| |||||||||||||||||||||    
T  8109047 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 8108993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 135 - 193
Target Start/End: Complemental strand, 20480671 - 20480613
Alignment:
Q  135 ttatttggcttaattgcactttcccccctatcttttgctaattgtgcgattttgcaccc 193  Q
    |||||||||||||||||||||| ||||||||  ||||| ||||||||||||||||||||    
T  20480671 ttatttggcttaattgcacttttccccctatagtttgccaattgtgcgattttgcaccc 20480613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 141 - 195
Target Start/End: Complemental strand, 41083264 - 41083210
Alignment:
Q  141 ggcttaattgcactttcccccctatcttttgctaattgtgcgattttgcaccccc 195  Q
    |||||||||||||||| |||||||||||||| || ||||||||||||||||||||    
T  41083264 ggcttaattgcacttttccccctatcttttgttagttgtgcgattttgcaccccc 41083210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 133 - 194
Target Start/End: Original strand, 48190763 - 48190825
Alignment:
Q  133 atttatttggcttaattgcactttcc-cccctatcttttgctaattgtgcgattttgcacccc 194  Q
    |||| ||||||||||||||||||| | |||||||||||||| |||||||||||||||||||||    
T  48190763 atttttttggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacccc 48190825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 138 - 195
Target Start/End: Complemental strand, 20371409 - 20371352
Alignment:
Q  138 tttggcttaattgcactttcccccctatcttttgctaattgtgcgattttgcaccccc 195  Q
    ||||||||||||||||||| ||||||||  ||||| ||||||||||||||||||||||    
T  20371409 tttggcttaattgcacttttccccctatagtttgccaattgtgcgattttgcaccccc 20371352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 144 - 192
Target Start/End: Complemental strand, 22149750 - 22149701
Alignment:
Q  144 ttaattgcacttt-cccccctatcttttgctaattgtgcgattttgcacc 192  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  22149750 ttaattgcacttttcccccctatcttttgctaattgtgcgattttgcacc 22149701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 138 - 194
Target Start/End: Original strand, 27172113 - 27172169
Alignment:
Q  138 tttggcttaattgcactttcccccctatcttttgctaattgtgcgattttgcacccc 194  Q
    ||||||||||||||||||| ||||||||  ||||| |||||||||||||||||||||    
T  27172113 tttggcttaattgcacttttccccctatagtttgccaattgtgcgattttgcacccc 27172169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 141 - 195
Target Start/End: Complemental strand, 47955662 - 47955607
Alignment:
Q  141 ggcttaattgcacttt-cccccctatcttttgctaattgtgcgattttgcaccccc 195  Q
    |||||||||||||||| ||||||||||||||  |||||||||||||||||||||||    
T  47955662 ggcttaattgcacttttcccccctatcttttattaattgtgcgattttgcaccccc 47955607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 141 - 195
Target Start/End: Original strand, 17518303 - 17518357
Alignment:
Q  141 ggcttaattgcactttcccccctatcttttgctaattgtgcgattttgcaccccc 195  Q
    ||||||||||||| || |||| ||||||||| |||||||||||||||||||||||    
T  17518303 ggcttaattgcacctttccccttatcttttgttaattgtgcgattttgcaccccc 17518357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 141 - 195
Target Start/End: Original strand, 22149403 - 22149456
Alignment:
Q  141 ggcttaattgcactttcccccctatcttttgctaattgtgcgattttgcaccccc 195  Q
    |||||||||||||||| ||||||||| |||| |||||||||||||||||||||||    
T  22149403 ggcttaattgcacttttccccctatc-tttggtaattgtgcgattttgcaccccc 22149456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 141 - 194
Target Start/End: Original strand, 44911025 - 44911079
Alignment:
Q  141 ggcttaattgcactttcccccc-tatcttttgctaattgtgcgattttgcacccc 194  Q
    |||||||||||||||||||||| ||| |||||| |||||||||||||||||||||    
T  44911025 ggcttaattgcactttccccccctatattttgccaattgtgcgattttgcacccc 44911079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 142 - 192
Target Start/End: Original strand, 46056904 - 46056953
Alignment:
Q  142 gcttaattgcactttcccccctatcttttgctaattgtgcgattttgcacc 192  Q
    ||||||||||||||||||| |||||||||||||||| ||||||||||||||    
T  46056904 gcttaattgcactttcccc-ctatcttttgctaattttgcgattttgcacc 46056953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 141 - 194
Target Start/End: Original strand, 49284409 - 49284463
Alignment:
Q  141 ggcttaattgcactttcc-cccctatcttttgctaattgtgcgattttgcacccc 194  Q
    |||||||||||||||| | |||||||||||||| |||||||||||||||||||||    
T  49284409 ggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacccc 49284463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 138 - 194
Target Start/End: Original strand, 9347123 - 9347180
Alignment:
Q  138 tttggcttaattgcacttt-cccccctatcttttgctaattgtgcgattttgcacccc 194  Q
    ||||||||||||||||||| |||||||||  ||||| |||||||||||||||||||||    
T  9347123 tttggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 9347180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 141 - 194
Target Start/End: Complemental strand, 9347604 - 9347551
Alignment:
Q  141 ggcttaattgcactttcccccctatcttttgctaattgtgcgattttgcacccc 194  Q
    |||||||||||||||||||||||||  ||||| |||||||| ||||||||||||    
T  9347604 ggcttaattgcactttcccccctatagtttgccaattgtgcaattttgcacccc 9347551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 144 - 195
Target Start/End: Original strand, 8108724 - 8108776
Alignment:
Q  144 ttaattgcactttccc-ccctatcttttgctaattgtgcgattttgcaccccc 195  Q
    ||||||||||||| || |||||||||||| |||||||||||||||||||||||    
T  8108724 ttaattgcacttttcctccctatcttttgttaattgtgcgattttgcaccccc 8108776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 141 - 189
Target Start/End: Original strand, 19007735 - 19007783
Alignment:
Q  141 ggcttaattgcactttcccccctatcttttgctaattgtgcgattttgc 189  Q
    |||||||||||||||||||||||||  ||||| ||||||||||||||||    
T  19007735 ggcttaattgcactttcccccctatagtttgccaattgtgcgattttgc 19007783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 138 - 194
Target Start/End: Complemental strand, 50615677 - 50615621
Alignment:
Q  138 tttggcttaattgcactttcccccctatcttttgctaattgtgcgattttgcacccc 194  Q
    ||||||||||||||||||| ||||||||  ||||  |||||||||||||||||||||    
T  50615677 tttggcttaattgcacttttccccctatagtttgtcaattgtgcgattttgcacccc 50615621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 138 - 194
Target Start/End: Complemental strand, 50623505 - 50623449
Alignment:
Q  138 tttggcttaattgcactttcccccctatcttttgctaattgtgcgattttgcacccc 194  Q
    ||||||||||||||||||| ||||||||  ||||  |||||||||||||||||||||    
T  50623505 tttggcttaattgcacttttccccctatagtttgtcaattgtgcgattttgcacccc 50623449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 195
Target Start/End: Complemental strand, 31848246 - 31848191
Alignment:
Q  141 ggcttaattgcactttcc-cccctatcttttgctaattgtgcgattttgcaccccc 195  Q
    |||||||||||||||| | ||||||||||||| ||||||| |||||||||||||||    
T  31848246 ggcttaattgcacttttctcccctatcttttgttaattgtacgattttgcaccccc 31848191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 141 - 194
Target Start/End: Complemental strand, 32163097 - 32163043
Alignment:
Q  141 ggcttaattgcacttt-cccccctatcttttgctaattgtgcgattttgcacccc 194  Q
    |||||||||||||||| |||||||||  ||||| |||||||||||||||||||||    
T  32163097 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 32163043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 141 - 194
Target Start/End: Complemental strand, 39692054 - 39692000
Alignment:
Q  141 ggcttaattgcacttt-cccccctatcttttgctaattgtgcgattttgcacccc 194  Q
    |||||||||||||||| ||||||||| |||||  |||||||||||||||||||||    
T  39692054 ggcttaattgcacttttcccccctatattttgtcaattgtgcgattttgcacccc 39692000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 140 - 244
Target Start/End: Original strand, 41082908 - 41083011
Alignment:
Q  140 tggcttaattgcactttc-ccccctatcttttgctaattgtgcgattttgcacccccctcnnnnnnnnngagcgattttgcaccccatctttttgccccc 238  Q
    ||||||||||| |||||  ||||||||||||||| |||||||||||||||||  ||||||          ||||||||||||||||||||||||||||||    
T  41082908 tggcttaattgtactttttccccctatcttttgccaattgtgcgattttgca-tcccctcttttttttt-agcgattttgcaccccatctttttgccccc 41083005  T
Q  239 tctctg 244  Q
    | ||||    
T  41083006 tttctg 41083011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 141 - 194
Target Start/End: Complemental strand, 48191409 - 48191355
Alignment:
Q  141 ggcttaattgcactttcc-cccctatcttttgctaattgtgcgattttgcacccc 194  Q
    |||||||||||||||| | |||||||||||||| ||| |||||||||||||||||    
T  48191409 ggcttaattgcacttttcacccctatcttttgccaatggtgcgattttgcacccc 48191355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 138 - 194
Target Start/End: Original strand, 6002234 - 6002291
Alignment:
Q  138 tttggcttaattgcactttcc-cccctatcttttgctaattgtgcgattttgcacccc 194  Q
    ||||||||||||||||||| | |||||||||||||  ||||||| |||||||||||||    
T  6002234 tttggcttaattgcacttttcacccctatcttttgtcaattgtgtgattttgcacccc 6002291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 141 - 194
Target Start/End: Original strand, 20480168 - 20480221
Alignment:
Q  141 ggcttaattgcactttcccccctatcttttgctaattgtgcgattttgcacccc 194  Q
    |||||||||||||||| ||||||||  ||||  |||||||||||||||||||||    
T  20480168 ggcttaattgcacttttccccctatagtttgtcaattgtgcgattttgcacccc 20480221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 138 - 194
Target Start/End: Complemental strand, 48105173 - 48105116
Alignment:
Q  138 tttggcttaattgcactttcccccct-atcttttgctaattgtgcgattttgcacccc 194  Q
    ||||||||||||||||||| |||||| ||  ||||| |||||||||||||||||||||    
T  48105173 tttggcttaattgcacttttcccccttatagtttgccaattgtgcgattttgcacccc 48105116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 195
Target Start/End: Complemental strand, 1177069 - 1177017
Alignment:
Q  144 ttaattgcactttccc-ccctatcttttgctaattgtgcgattttgcaccccc 195  Q
    ||||||||||||| || |||||||||| ||||||||||| |||||||||||||    
T  1177069 ttaattgcacttttcctccctatctttcgctaattgtgcaattttgcaccccc 1177017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 194
Target Start/End: Complemental strand, 50430137 - 50430081
Alignment:
Q  139 ttggcttaattgcacttt-cccccctatcttttgctaattgtgcgattttgcacccc 194  Q
    |||| ||||||||||||| |||||||||  ||||| |||||||||||||||||||||    
T  50430137 ttggtttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 50430081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 102
Target Start/End: Complemental strand, 17607388 - 17607293
Alignment:
Q  7 ttgttgatgataagtgtgcttgatgactacttgatcgtgatatttgggattgttatgtgaatgtgtatattgaattaactatttatgtgaagtact 102  Q
    ||||||||||||||||| |||| ||| || ||| | ||  ||||| ||| |||||||| |||||  |||||||||||| | ||||||| |||||||    
T  17607388 ttgttgatgataagtgtacttggtgaatatttggttgtattattttggaatgttatgtaaatgtacatattgaattaattgtttatgttaagtact 17607293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 144 - 190
Target Start/End: Original strand, 31847898 - 31847945
Alignment:
Q  144 ttaattgcactttcccccct-atcttttgctaattgtgcgattttgca 190  Q
    ||||||||||||| |||||| |||||||||||||||||| ||||||||    
T  31847898 ttaattgcactttacccccttatcttttgctaattgtgcaattttgca 31847945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 190
Target Start/End: Original strand, 49317751 - 49317801
Alignment:
Q  140 tggcttaattgcactttcccccctatcttttgctaattgtgcgattttgca 190  Q
    ||||||||||||||||| ||||||||  ||||| |||||||| ||||||||    
T  49317751 tggcttaattgcacttttccccctatagtttgccaattgtgcaattttgca 49317801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 141 - 190
Target Start/End: Complemental strand, 999578 - 999529
Alignment:
Q  141 ggcttaattgcactttcccccctatcttttgctaattgtgcgattttgca 190  Q
    |||||||||||||||| ||||||||   |||| |||||||||||||||||    
T  999578 ggcttaattgcacttttccccctatagattgccaattgtgcgattttgca 999529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 141 - 190
Target Start/End: Original strand, 4692022 - 4692071
Alignment:
Q  141 ggcttaattgcactttcccccctatcttttgctaattgtgcgattttgca 190  Q
    ||||||||||||||||| || ||||  |||||||||||| ||||||||||    
T  4692022 ggcttaattgcactttctcctctatagtttgctaattgtacgattttgca 4692071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 210 - 239
Target Start/End: Complemental strand, 8109007 - 8108978
Alignment:
Q  210 gcgattttgcaccccatctttttgccccct 239  Q
    ||||||||||||||||||||||||||||||    
T  8109007 gcgattttgcaccccatctttttgccccct 8108978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 138 - 194
Target Start/End: Original strand, 13918443 - 13918500
Alignment:
Q  138 tttggcttaattgcactttcccc-cctatcttttgctaattgtgcgattttgcacccc 194  Q
    |||||||||||||||||||  || |||||  ||||| |||||||||||||||||||||    
T  13918443 tttggcttaattgcactttttcctcctatagtttgccaattgtgcgattttgcacccc 13918500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 138 - 194
Target Start/End: Original strand, 26814691 - 26814748
Alignment:
Q  138 tttggcttaattgcactttccc-ccctatcttttgctaattgtgcgattttgcacccc 194  Q
    ||||||||||||||||||| || ||||||  ||||  |||||||||||||||||||||    
T  26814691 tttggcttaattgcacttttcctccctatagtttgtcaattgtgcgattttgcacccc 26814748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 195
Target Start/End: Original strand, 1176839 - 1176891
Alignment:
Q  144 ttaattgcactttc-ccccctatcttttgctaattgtgcgattttgcaccccc 195  Q
    |||||||||||||  ||||||||||||||  |||||||| |||||||||||||    
T  1176839 ttaattgcacttttaccccctatcttttgtcaattgtgcaattttgcaccccc 1176891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 194
Target Start/End: Complemental strand, 6703950 - 6703894
Alignment:
Q  139 ttggcttaattgcactttcc-cccctatcttttgctaattgtgcgattttgcacccc 194  Q
    |||||||||||||||||| | |||||||  ||||| |||||||| ||||||||||||    
T  6703950 ttggcttaattgcacttttctcccctatagtttgccaattgtgcaattttgcacccc 6703894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 102
Target Start/End: Complemental strand, 17022013 - 17021925
Alignment:
Q  14 tgataagtgtgcttgatgactacttgatcgtgatatttgggattgttatgtgaatgtgtatattgaattaactatttatgtgaagtact 102  Q
    |||||| | |||||| ||| |||||||| ||  ||| | ||| |||||||| |||||  |||||||||||||| ||||||| |||||||    
T  17022013 tgataaatatgcttggtgaatacttgattgtattatcttggaatgttatgtaaatgtacatattgaattaactgtttatgttaagtact 17021925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 209 - 237
Target Start/End: Complemental strand, 22149687 - 22149659
Alignment:
Q  209 agcgattttgcaccccatctttttgcccc 237  Q
    |||||||||||||||||||||||||||||    
T  22149687 agcgattttgcaccccatctttttgcccc 22149659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 208 - 244
Target Start/End: Original strand, 31847961 - 31847997
Alignment:
Q  208 gagcgattttgcaccccatctttttgccccctctctg 244  Q
    |||||||||||||||| ||||||||||||||| ||||    
T  31847961 gagcgattttgcacccgatctttttgccccctttctg 31847997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 188
Target Start/End: Complemental strand, 46057243 - 46057199
Alignment:
Q  144 ttaattgcactttcccccctatcttttgctaattgtgcgattttg 188  Q
    |||||||||||||  ||||||||||||||||||| ||| ||||||    
T  46057243 ttaattgcactttttcccctatcttttgctaattatgcaattttg 46057199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 191
Target Start/End: Original strand, 46823846 - 46823894
Alignment:
Q  144 ttaattgcacttt-cccccctatcttttgctaattgtgcgattttgcac 191  Q
    ||||||||||||| |||||||||  ||||| ||||||||||||||||||    
T  46823846 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcac 46823894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 190
Target Start/End: Original strand, 47498298 - 47498349
Alignment:
Q  138 tttggcttaattgcactttcccccctatcttttgctaattgtgcgattttgca 190  Q
    ||||||||||||||||||| ||||||||  ||||| |||||||| ||||||||    
T  47498298 tttggcttaattgcacttt-ccccctatagtttgccaattgtgcaattttgca 47498349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 194
Target Start/End: Complemental strand, 47498547 - 47498495
Alignment:
Q  142 gcttaattgcactttcccccctatcttttgctaattgtgcgattttgcacccc 194  Q
    ||||||||||||||| ||||||||  ||||  ||||||||| |||||||||||    
T  47498547 gcttaattgcacttttccccctatagtttgtcaattgtgcggttttgcacccc 47498495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 194
Target Start/End: Complemental strand, 50526524 - 50526472
Alignment:
Q  143 cttaattgcactttc-ccccctatcttttgctaattgtgcgattttgcacccc 194  Q
    ||||||||||||||  ||||||||  ||||| |||||||||||||||||||||    
T  50526524 cttaattgcactttttccccctatagtttgccaattgtgcgattttgcacccc 50526472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 108; Significance: 2e-54; HSPs: 49)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 24082594 - 24082455
Alignment:
Q  1 tgataattgttgatgataagtgtgcttgatgactacttgatcgtgatatttgggattgttatgtgaatgtgtatattgaattaactatttatgtgaagta 100  Q
    |||||||||||||||||||||||||||| ||| || |||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||    
T  24082594 tgataattgttgatgataagtgtgcttgttgagtatttgatcgtgatatttgggattgttatgtgaatgtgtatattgaattaactctctatgtgaagta 24082495  T
Q  101 ctcgaaaaagattttaattcatatatgctcaaatttattt 140  Q
    |||||||  || ||||||||||||||||||||||||||||    
T  24082494 ctcgaaatggactttaattcatatatgctcaaatttattt 24082455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 29912527 - 29912388
Alignment:
Q  1 tgataattgttgatgataagtgtgcttgatgactacttgatcgtgatatttgggattgttatgtgaatgtgtatattgaattaactatttatgtgaagta 100  Q
    |||||||||||||| |||||| |||||| ||| ||||||||||||||||||||||||||||| |||||||| |||||||||||| | |||||||||||||    
T  29912527 tgataattgttgattataagtatgcttggtgaatacttgatcgtgatatttgggattgttatatgaatgtgcatattgaattaaatgtttatgtgaagta 29912428  T
Q  101 ctcgaaaaagattttaattcatatatgctcaaatttattt 140  Q
    |||| ||  || ||||||||||||||||||||||||||||    
T  29912427 ctcggaatcgactttaattcatatatgctcaaatttattt 29912388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 6 - 140
Target Start/End: Complemental strand, 6455179 - 6455045
Alignment:
Q  6 attgttgatgataagtgtgcttgatgactacttgatcgtgatatttgggattgttatgtgaatgtgtatattgaattaactatttatgtgaagtactcga 105  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||||| || ||||||||||||||||||||||||||||| ||||||| ||||| ||      
T  6455179 attgttgatgataagtgtgcttggtgagtacttgatcgtgatatttggaatggttatgtgaatgtgtatattgaattaactgtttatgttaagtattcat 6455080  T
Q  106 aaaagattttaattcatatatgctcaaatttattt 140  Q
    ||     ||||||||||||||||||||||||||||    
T  6455079 aatttgatttaattcatatatgctcaaatttattt 6455045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 5623121 - 5623260
Alignment:
Q  1 tgataattgttgatgataagtgtgcttgatgactacttgatcgtgatatttgggattgttatgtgaatgtgtatattgaattaactatttatgtgaagta 100  Q
    |||| |||||||||||||||||   ||||||| ||||| ||||||||| |||| ||||||| |||||||||||||||||||||||||||||||| ||| |    
T  5623121 tgatgattgttgatgataagtgcatttgatgagtacttaatcgtgataattggaattgttaggtgaatgtgtatattgaattaactatttatgttaagca 5623220  T
Q  101 ctc-gaaaaagattttaattcatatatgctcaaatttattt 140  Q
    ||| |||   || ||||||||||||||||||||||||||||    
T  5623221 ctcagaacttga-tttaattcatatatgctcaaatttattt 5623260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 139 - 244
Target Start/End: Original strand, 18433013 - 18433118
Alignment:
Q  139 ttggcttaattgcacttt-cccccctatcttttgctaattgtgcgattttgcacccccctcnnnnnnnnngagcgattttgcaccccatctttttgcccc 237  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||| |||| ||         ||||||||||||||||||||||||||||||    
T  18433013 ttggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgca-ccccatctttttttttgagcgattttgcaccccatctttttgcccc 18433111  T
Q  238 ctctctg 244  Q
    || ||||    
T  18433112 ctttctg 18433118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 141 - 194
Target Start/End: Original strand, 22428934 - 22428987
Alignment:
Q  141 ggcttaattgcactttcccccctatcttttgctaattgtgcgattttgcacccc 194  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22428934 ggcttaattgcactttcccccctatcttttgctaattgtgcgattttgcacccc 22428987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 139 - 244
Target Start/End: Original strand, 34576865 - 34576968
Alignment:
Q  139 ttggcttaattgcactttcccccctatcttttgctaattgtgcgattttgcacccccctcnnnnnnnnngagcgattttgcaccccatctttttgccccc 238  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||| || |||| ||         |||||||||||||||||||||||||||||||    
T  34576865 ttggtttaattgcactttcccccctatcttttgctaattgtgcgattttaca-ccccatc-ttttttttgagcgattttgcaccccatctttttgccccc 34576962  T
Q  239 tctctg 244  Q
    | ||||    
T  34576963 tttctg 34576968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 26561479 - 26561618
Alignment:
Q  1 tgataattgttgatgataagtgtgcttgatgactacttgatcgtgatatttgggattgttatgtgaatgtgtatattgaattaactatttatgtgaagta 100  Q
    ||||||||||||||||||| |||||||| ||| |||||  ||||||| || || | |||||||||||  ||||||||||||| | |  |||||| |||||    
T  26561479 tgataattgttgatgataaatgtgcttggtgagtacttattcgtgatgttaggaactgttatgtgaagatgtatattgaattgaatgcttatgttaagta 26561578  T
Q  101 ctcgaaaaagattttaattcatatatgctcaaatttattt 140  Q
    || | ||   | ||||||||||||||| ||||||||||||    
T  26561579 cttggaacttaatttaattcatatatgttcaaatttattt 26561618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 141 - 194
Target Start/End: Complemental strand, 22429249 - 22429196
Alignment:
Q  141 ggcttaattgcactttcccccctatcttttgctaattgtgcgattttgcacccc 194  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||||||||||    
T  22429249 ggcttaattgcatttttccccctatcttttgctaattgtgcgattttgcacccc 22429196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 141 - 244
Target Start/End: Original strand, 25115757 - 25115860
Alignment:
Q  141 ggcttaattgcacttt-cccccctatcttttgctaattgtgcgattttgcacccccctcnnnnnnnnngagcgattttgcaccccatctttttgccccct 239  Q
    |||||||||||||||| |||||||||||||||| ||||||| ||||||||| ||||||          ||||||||||||||||||||||||||||||||    
T  25115757 ggcttaattgcacttttcccccctatcttttgccaattgtgtgattttgca-ccccctttttttttttgagcgattttgcaccccatctttttgccccct 25115855  T
Q  240 ctctg 244  Q
     ||||    
T  25115856 ttctg 25115860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 141 - 197
Target Start/End: Complemental strand, 25116115 - 25116058
Alignment:
Q  141 ggcttaattgcacttt-cccccctatcttttgctaattgtgcgattttgcacccccct 197  Q
    |||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  25116115 ggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgcacccccct 25116058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 141 - 244
Target Start/End: Original strand, 25174849 - 25174952
Alignment:
Q  141 ggcttaattgcacttt-cccccctatcttttgctaattgtgcgattttgcacccccctcnnnnnnnnngagcgattttgcaccccatctttttgccccct 239  Q
    |||||||||||||||| |||||||||||||||| ||||||| ||||||||| ||||||          ||||||||||||||||||||||||||||||||    
T  25174849 ggcttaattgcacttttcccccctatcttttgccaattgtgtgattttgca-ccccctttttttttttgagcgattttgcaccccatctttttgccccct 25174947  T
Q  240 ctctg 244  Q
     ||||    
T  25174948 ttctg 25174952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 141 - 244
Target Start/End: Original strand, 26020450 - 26020553
Alignment:
Q  141 ggcttaattgcactttccc-ccctatcttttgctaattgtgcgattttgcacccccctcnnnnnnnnngagcgattttgcaccccatctttttgccccct 239  Q
    |||||||||||||||| || ||||||||||||||||||||||||||||||| |||| ||         ||||||||||||||| ||||||||||||||||    
T  26020450 ggcttaattgcacttttcctccctatcttttgctaattgtgcgattttgca-ccccatctttttttttgagcgattttgcaccgcatctttttgccccct 26020548  T
Q  240 ctctg 244  Q
     ||||    
T  26020549 ttctg 26020553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 141 - 195
Target Start/End: Complemental strand, 18433370 - 18433315
Alignment:
Q  141 ggcttaattgcacttt-cccccctatcttttgctaattgtgcgattttgcaccccc 195  Q
    |||||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  18433370 ggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgcaccccc 18433315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 138 - 193
Target Start/End: Original strand, 23011076 - 23011131
Alignment:
Q  138 tttggcttaattgcactttcccccctatcttttgctaattgtgcgattttgcaccc 193  Q
    ||||||||||||||| ||| |||| |||||||||||||||||||||||||||||||    
T  23011076 tttggcttaattgcatttttccccttatcttttgctaattgtgcgattttgcaccc 23011131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 141 - 195
Target Start/End: Complemental strand, 25175205 - 25175150
Alignment:
Q  141 ggcttaattgcacttt-cccccctatcttttgctaattgtgcgattttgcaccccc 195  Q
    |||||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  25175205 ggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgcaccccc 25175150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 140 - 194
Target Start/End: Complemental strand, 34577218 - 34577164
Alignment:
Q  140 tggcttaattgcactttcccccctatcttttgctaattgtgcgattttgcacccc 194  Q
    |||||||||||||||||  |||||||||||||||||||||| |||||||||||||    
T  34577218 tggcttaattgcactttttcccctatcttttgctaattgtgtgattttgcacccc 34577164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 138 - 192
Target Start/End: Complemental strand, 37610674 - 37610620
Alignment:
Q  138 tttggcttaattgcactttcccccctatcttttgctaattgtgcgattttgcacc 192  Q
    ||||||||||||| ||||||||||||||  |||||||||||||||||||||||||    
T  37610674 tttggcttaattgtactttcccccctatagtttgctaattgtgcgattttgcacc 37610620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 144 - 193
Target Start/End: Original strand, 41382896 - 41382945
Alignment:
Q  144 ttaattgcactttcccccctatcttttgctaattgtgcgattttgcaccc 193  Q
    ||||||||| |||||||||||||||||| |||||||||||||||||||||    
T  41382896 ttaattgcattttcccccctatcttttgttaattgtgcgattttgcaccc 41382945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 141 - 194
Target Start/End: Complemental strand, 41383220 - 41383167
Alignment:
Q  141 ggcttaattgcactttcccccctatcttttgctaattgtgcgattttgcacccc 194  Q
    |||||||||| ||||| |||||||| ||||||||||||||||||||||||||||    
T  41383220 ggcttaattgaacttttccccctattttttgctaattgtgcgattttgcacccc 41383167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 139 - 194
Target Start/End: Complemental strand, 18817667 - 18817611
Alignment:
Q  139 ttggcttaattgcactttcc-cccctatcttttgctaattgtgcgattttgcacccc 194  Q
    |||||||||||||||||| | |||||||||||||| |||||||||||||||||||||    
T  18817667 ttggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacccc 18817611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 138 - 193
Target Start/End: Complemental strand, 9665882 - 9665828
Alignment:
Q  138 tttggcttaattgcactttcccccctatcttttgctaattgtgcgattttgcaccc 193  Q
    |||||||||||| |||||| |||||||||||||||||||||||| |||||||||||    
T  9665882 tttggcttaattccacttttccccctatcttttgctaattgtgc-attttgcaccc 9665828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 141 - 190
Target Start/End: Complemental strand, 16466796 - 16466746
Alignment:
Q  141 ggcttaattgcacttt-cccccctatcttttgctaattgtgcgattttgca 190  Q
    |||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  16466796 ggcttaattgcacttttcccccctatattttgctaattgtgcgattttgca 16466746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 138 - 186
Target Start/End: Complemental strand, 12441367 - 12441320
Alignment:
Q  138 tttggcttaattgcactttcccccctatcttttgctaattgtgcgattt 186  Q
    ||||||||||||||||||| |||| ||||||||||||||||||||||||    
T  12441367 tttggcttaattgcacttttcccc-tatcttttgctaattgtgcgattt 12441320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 142 - 194
Target Start/End: Complemental strand, 22729492 - 22729440
Alignment:
Q  142 gcttaattgcactttcccccctatcttttgctaattgtgcgattttgcacccc 194  Q
    ||||||||||||||| ||||||||  ||||| |||||||||||||||||||||    
T  22729492 gcttaattgcacttttccccctataatttgccaattgtgcgattttgcacccc 22729440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 144 - 192
Target Start/End: Original strand, 31569910 - 31569958
Alignment:
Q  144 ttaattgcactttcccccctatcttttgctaattgtgcgattttgcacc 192  Q
    ||||||||||||| ||||||||||||||  |||||||||||||||||||    
T  31569910 ttaattgcacttttccccctatcttttgtcaattgtgcgattttgcacc 31569958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 192
Target Start/End: Complemental strand, 37780799 - 37780744
Alignment:
Q  138 tttggcttaattgcacttt-cccccctatcttttgctaattgtgcgattttgcacc 192  Q
    ||||||||||||| ||||| |||||||||  |||||||||||||||||||||||||    
T  37780799 tttggcttaattgtacttttcccccctatagtttgctaattgtgcgattttgcacc 37780744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 144 - 194
Target Start/End: Original strand, 9665560 - 9665609
Alignment:
Q  144 ttaattgcactttcccccctatcttttgctaattgtgcgattttgcacccc 194  Q
    ||||||||||||| |||| ||||||||||||||||||| ||||||||||||    
T  9665560 ttaattgcacttttcccc-tatcttttgctaattgtgcaattttgcacccc 9665609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 141 - 194
Target Start/End: Original strand, 12498567 - 12498621
Alignment:
Q  141 ggcttaattgcacttt-cccccctatcttttgctaattgtgcgattttgcacccc 194  Q
    |||||||||||||||| |||||||||  ||||| |||||||||||||||||||||    
T  12498567 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 12498621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 141 - 194
Target Start/End: Complemental strand, 12498982 - 12498928
Alignment:
Q  141 ggcttaattgcacttt-cccccctatcttttgctaattgtgcgattttgcacccc 194  Q
    |||||||||||||||| |||||||||  ||||| |||||||||||||||||||||    
T  12498982 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 12498928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 141 - 194
Target Start/End: Original strand, 18816952 - 18817006
Alignment:
Q  141 ggcttaattgcactttcc-cccctatcttttgctaattgtgcgattttgcacccc 194  Q
    |||||||||||| ||| | |||||||||||||| |||||||||||||||||||||    
T  18816952 ggcttaattgcatttttcacccctatcttttgccaattgtgcgattttgcacccc 18817006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 141 - 194
Target Start/End: Complemental strand, 26571218 - 26571164
Alignment:
Q  141 ggcttaattgcacttt-cccccctatcttttgctaattgtgcgattttgcacccc 194  Q
    |||||||||||||||| |||||||||  ||||| |||||||||||||||||||||    
T  26571218 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 26571164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 144 - 193
Target Start/End: Complemental strand, 41383100 - 41383048
Alignment:
Q  144 ttaattgcactttcccccctatctttt---gctaattgtgcgattttgcaccc 193  Q
    |||||||||||||||||||||| ||||   |||||||||||||||||||||||    
T  41383100 ttaattgcactttcccccctattttttttggctaattgtgcgattttgcaccc 41383048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 140 - 194
Target Start/End: Original strand, 19514524 - 19514580
Alignment:
Q  140 tggcttaattgcactttcccccc--tatcttttgctaattgtgcgattttgcacccc 194  Q
    |||||||||||||||||||||||  |||  ||||| |||||||||||||||||||||    
T  19514524 tggcttaattgcactttcccccccctatagtttgccaattgtgcgattttgcacccc 19514580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 144 - 193
Target Start/End: Complemental strand, 23011432 - 23011383
Alignment:
Q  144 ttaattgcactttcccccctatcttttgctaattgtgcgattttgcaccc 193  Q
    |||||||||||||  ||| ||||||||| |||||||||||||||||||||    
T  23011432 ttaattgcactttttcccttatcttttgttaattgtgcgattttgcaccc 23011383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 141 - 194
Target Start/End: Original strand, 37610202 - 37610255
Alignment:
Q  141 ggcttaattgcactttcccccctatcttttgctaattgtgcgattttgcacccc 194  Q
    |||||||||||||||| ||||||||  ||||| ||||||| |||||||||||||    
T  37610202 ggcttaattgcacttttccccctatagtttgccaattgtgtgattttgcacccc 37610255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 141 - 194
Target Start/End: Original strand, 37780320 - 37780373
Alignment:
Q  141 ggcttaattgcactttcccccctatcttttgctaattgtgcgattttgcacccc 194  Q
    |||||||||||||||| ||||||||  ||||| ||||||| |||||||||||||    
T  37780320 ggcttaattgcacttttccccctatagtttgccaattgtgtgattttgcacccc 37780373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 194
Target Start/End: Original strand, 3888237 - 3888293
Alignment:
Q  139 ttggcttaattgcac-tttcccccctatcttttgctaattgtgcgattttgcacccc 194  Q
    ||||||||||||||| ||||||||||||  ||||| |||||| ||||||||||||||    
T  3888237 ttggcttaattgcacatttcccccctatagtttgccaattgtacgattttgcacccc 3888293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 191
Target Start/End: Original strand, 22729006 - 22729058
Alignment:
Q  139 ttggcttaattgcactttcccccctatcttttgctaattgtgcgattttgcac 191  Q
    |||||||||||||||||| ||||||||  ||||  ||||||||||||||||||    
T  22729006 ttggcttaattgcacttttccccctatagtttgtaaattgtgcgattttgcac 22729058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 141 - 195
Target Start/End: Complemental strand, 5187884 - 5187829
Alignment:
Q  141 ggcttaattgcactttcccccct-atcttttgctaattgtgcgattttgcaccccc 195  Q
    ||||||||||||||||  ||||| |||||||| ||||||||| |||||||||||||    
T  5187884 ggcttaattgcacttttgccccttatcttttgttaattgtgcaattttgcaccccc 5187829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 144 - 194
Target Start/End: Complemental strand, 11351478 - 11351427
Alignment:
Q  144 ttaattgcactttcccc-cctatcttttgctaattgtgcgattttgcacccc 194  Q
    ||||||||||||| | | |||||||||||| |||||||||||||||||||||    
T  11351478 ttaattgcacttttcactcctatcttttgccaattgtgcgattttgcacccc 11351427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 144 - 194
Target Start/End: Original strand, 21207229 - 21207280
Alignment:
Q  144 ttaattgcacttt-cccccctatcttttgctaattgtgcgattttgcacccc 194  Q
    ||||||||||||| |||||||||  ||||| |||||||||||||||||||||    
T  21207229 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 21207280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 141 - 192
Target Start/End: Complemental strand, 43464245 - 43464194
Alignment:
Q  141 ggcttaattgcactttcccccctatcttttgctaattgtgcgattttgcacc 192  Q
    |||||||||||||||| ||||||||  ||||  |||||||||||||||||||    
T  43464245 ggcttaattgcacttttccccctatagtttgtcaattgtgcgattttgcacc 43464194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 192
Target Start/End: Original strand, 16726096 - 16726130
Alignment:
Q  158 ccccctatcttttgctaattgtgcgattttgcacc 192  Q
    ||||||||||||||| |||||||||||||||||||    
T  16726096 ccccctatcttttgccaattgtgcgattttgcacc 16726130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 194
Target Start/End: Complemental strand, 19515017 - 19514963
Alignment:
Q  141 ggcttaattgcacttt-cccccctatcttttgctaattgtgcgattttgcacccc 194  Q
    |||||||||||||||| |||||||||  ||||  |||||||||||||||||||||    
T  19515017 ggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcacccc 19514963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 244
Target Start/End: Complemental strand, 22429210 - 22429176
Alignment:
Q  210 gcgattttgcaccccatctttttgccccctctctg 244  Q
    |||||||||||||||||||||||||||||| ||||    
T  22429210 gcgattttgcaccccatctttttgccccctttctg 22429176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 194
Target Start/End: Original strand, 43463759 - 43463809
Alignment:
Q  144 ttaattgcactttcccccctatcttttgctaattgtgcgattttgcacccc 194  Q
    ||||||||||||| |||| |||  ||||| |||||||||||||||||||||    
T  43463759 ttaattgcacttttccccttatagtttgccaattgtgcgattttgcacccc 43463809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 138 - 187
Target Start/End: Complemental strand, 2817631 - 2817582
Alignment:
Q  138 tttggcttaattgcactttcccccctatcttttgctaattgtgcgatttt 187  Q
    |||| |||||||||||||| ||||||||  ||||| ||||||||||||||    
T  2817631 tttgacttaattgcacttttccccctatagtttgcgaattgtgcgatttt 2817582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 139 - 192
Target Start/End: Original strand, 12441040 - 12441093
Alignment:
Q  139 ttggcttaattgcactttcccccctatcttttgctaattgtgcgattttgcacc 192  Q
    ||||||||||||||||||   |||||||||||  ||||||||| ||||||||||    
T  12441040 ttggcttaattgcacttttttccctatcttttattaattgtgcaattttgcacc 12441093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 104; Significance: 6e-52; HSPs: 61)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 14819539 - 14819678
Alignment:
Q  1 tgataattgttgatgataagtgtgcttgatgactacttgatcgtgatatttgggattgttatgtgaatgtgtatattgaattaactatttatgtgaagta 100  Q
    |||||||| || |||||||||||||||| ||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||| |||||||    
T  14819539 tgataattttttatgataagtgtgcttggtgaatacttgatcgtgatatttgagattgttatgtgaatgtgtatattgaattaactgtttatttgaagta 14819638  T
Q  101 ctcgaaaaagattttaattcatatatgctcaaatttattt 140  Q
    |||||||  |||||||||||||||||||||||||||||||    
T  14819639 ctcgaaattgattttaattcatatatgctcaaatttattt 14819678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 6230352 - 6230491
Alignment:
Q  1 tgataattgttgatgataagtgtgcttgatgactacttgatcgtgatatttgggattgttatgtgaatgtgtatattgaattaactatttatgtgaagta 100  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| |||||||||||||||||||||| || ||||| |||||||    
T  6230352 tgataattgttgatgataagtgtgcttggtgagtacttgatcgtgatatttgggattgttttgtgaatgtgtatattgaattagctgtttatatgaagta 6230451  T
Q  101 ctcgaaaaagattttaattcatatatgctcaaatttattt 140  Q
    |||||||     ||||||||||||||||||||||||||||    
T  6230452 ctcgaaatttgatttaattcatatatgctcaaatttattt 6230491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 18968555 - 18968417
Alignment:
Q  1 tgataattgttgatgataagtgtgcttgatgactacttgatcgtgatatttgggattgttatgtgaatgtgtatattgaattaactatttatgtgaagta 100  Q
    |||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| || ||||||||||||||||||||||| | |||||||||||||    
T  18968555 tgataattgttgatgataagtgtgcttggtgagtacttgatcgtgatatttgggattattttgtgaatgtgtatattgaattaattgtttatgtgaagta 18968456  T
Q  101 ctcgaaaaagattttaattcatatatgctcaaatttatt 139  Q
    |||  |   ||||||||||||||||||||||| ||||||    
T  18968455 ctcagacttgattttaattcatatatgctcaagtttatt 18968417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 4147386 - 4147525
Alignment:
Q  1 tgataattgttgatgataagtgtgcttgatgactacttgatcgtgatatttgggattgttatgtgaatgtgtatattgaattaactatttatgtgaagta 100  Q
    |||||||||||||||||||||||||||| ||| ||||| |||||||||||||||| |||||| ||||| |||||||||||||||||||||||||||||||    
T  4147386 tgataattgttgatgataagtgtgcttggtgagtacttaatcgtgatatttgggactgttatatgaatttgtatattgaattaactatttatgtgaagta 4147485  T
Q  101 ctcgaaaaagattttaattcatatatgctcaaatttattt 140  Q
    |||| ||      |||||||||||||||||||||||||||    
T  4147486 ctcggaatttgacttaattcatatatgctcaaatttattt 4147525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 4163939 - 4164078
Alignment:
Q  1 tgataattgttgatgataagtgtgcttgatgactacttgatcgtgatatttgggattgttatgtgaatgtgtatattgaattaactatttatgtgaagta 100  Q
    |||||||||||||||||||| ||||||| ||| ||||| || |||||||||||||||||||||||||| | ||||||||||||||| |||||||||||||    
T  4163939 tgataattgttgatgataagcgtgcttggtgagtacttaattgtgatatttgggattgttatgtgaatttttatattgaattaactgtttatgtgaagta 4164038  T
Q  101 ctcgaaaaagattttaattcatatatgctcaaatttattt 140  Q
    |||| ||     ||||||||||||||||||||||||||||    
T  4164039 ctcggaattttatttaattcatatatgctcaaatttattt 4164078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 21168408 - 21168547
Alignment:
Q  1 tgataattgttgatgataagtgtgcttgatgactacttgatcgtgatatttgggattgttatgtgaatgtgtatattgaattaactatttatgtgaagta 100  Q
    |||| |||||||||||||||||   ||||||| ||||| ||||||||| |||| ||||||| |||||||||||||||||||||||||||||||| ||| |    
T  21168408 tgatgattgttgatgataagtgcatttgatgagtacttaatcgtgataattggaattgttaggtgaatgtgtatattgaattaactatttatgttaagca 21168507  T
Q  101 ctc-gaaaaagattttaattcatatatgctcaaatttattt 140  Q
    ||| |||   || ||||||||||||||||||||||||||||    
T  21168508 ctcagaacttga-tttaattcatatatgctcaaatttattt 21168547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 8 - 140
Target Start/End: Original strand, 43429235 - 43429367
Alignment:
Q  8 tgttgatgataagtgtgcttgatgactacttgatcgtgatatttgggattgttatgtgaatgtgtatattgaattaactatttatgtgaagtactcgaaa 107  Q
    ||||||||||||||||||||||||| ||||| |||||||| ||||| ||||||||||||| |||||||||||||||| |  |||||  ||||||| ||||    
T  43429235 tgttgatgataagtgtgcttgatgagtacttaatcgtgatgtttggaattgttatgtgaaggtgtatattgaattaaatgcttatgctaagtacttgaaa 43429334  T
Q  108 aagattttaattcatatatgctcaaatttattt 140  Q
         || |||||||||||| ||||||||||||    
T  43429335 cttgattcaattcatatatgttcaaatttattt 43429367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 141 - 195
Target Start/End: Complemental strand, 47871175 - 47871121
Alignment:
Q  141 ggcttaattgcactttcccccctatcttttgctaattgtgcgattttgcaccccc 195  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  47871175 ggcttaattgcacttttccccctatcttttgctaattgtgcgattttgcaccccc 47871121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 138 - 244
Target Start/End: Complemental strand, 20969076 - 20968971
Alignment:
Q  138 tttggcttaattgcacttt-cccccctatcttttgctaattgtgcgattttgcacccccctcnnnnnnnnngagcgattttgcaccccatctttttgccc 236  Q
    ||||||||||||||||||| |||||||||||||||| |||||||||||||||||  |||||          |||||||||||||||||||||||||||||    
T  20969076 tttggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgca--cccctttttttttttgagcgattttgcaccccatctttttgccc 20968979  T
Q  237 cctctctg 244  Q
    ||| ||||    
T  20968978 cctttctg 20968971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 17320268 - 17320407
Alignment:
Q  1 tgataattgttgatgataagtgtgcttgatgactacttgatcgtgatatttgggattgttatgtgaatgtgtatattgaattaactatttatgtgaagta 100  Q
    |||| ||| ||||||||||||||||||||||| || ||  || |||||||||| ||| ||||||||| |||||||||||||||| |  |||||| |||||    
T  17320268 tgatgattattgatgataagtgtgcttgatgagtaattattcctgatatttggaatttttatgtgaaggtgtatattgaattaaatgcttatgttaagta 17320367  T
Q  101 ctcgaaaaagattttaattcatatatgctcaaatttattt 140  Q
    || | ||     |||||||||| |||| ||||||||||||    
T  17320368 cttgtaacttgatttaattcatttatgttcaaatttattt 17320407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 138 - 195
Target Start/End: Complemental strand, 10293966 - 10293908
Alignment:
Q  138 tttggcttaattgcacttt-cccccctatcttttgctaattgtgcgattttgcaccccc 195  Q
    ||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  10293966 tttggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgcaccccc 10293908  T

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Target: chr3; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 141 - 195
Target Start/End: Original strand, 20968718 - 20968773
Alignment:
Q  141 ggcttaattgcac-tttcccccctatcttttgctaattgtgcgattttgcaccccc 195  Q
    ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  20968718 ggcttaattgcacctttcccccctatcttttgttaattgtgcgattttgcaccccc 20968773  T

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Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 132 - 193
Target Start/End: Original strand, 1927763 - 1927825
Alignment:
Q  132 aatttatttggcttaattgcac-tttcccccctatcttttgctaattgtgcgattttgcaccc 193  Q
    ||||| |||||||||||||||| ||||||||||||||||||| |||| |||||||||||||||    
T  1927763 aatttttttggcttaattgcacctttcccccctatcttttgccaattatgcgattttgcaccc 1927825  T

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Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 133 - 194
Target Start/End: Original strand, 3353120 - 3353181
Alignment:
Q  133 atttatttggcttaattgcactttcccccctatcttttgctaattgtgcgattttgcacccc 194  Q
    |||||||||||||||||||||||| ||||||||  ||||  |||||||||||||||||||||    
T  3353120 atttatttggcttaattgcacttttccccctatagtttgtcaattgtgcgattttgcacccc 3353181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 141 - 193
Target Start/End: Complemental strand, 8315135 - 8315083
Alignment:
Q  141 ggcttaattgcactttcccccctatcttttgctaattgtgcgattttgcaccc 193  Q
    ||||||||||||||||||||||||| |||||  ||||||||||||||||||||    
T  8315135 ggcttaattgcactttcccccctatattttgtcaattgtgcgattttgcaccc 8315083  T

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Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 140 - 195
Target Start/End: Original strand, 17372297 - 17372353
Alignment:
Q  140 tggcttaattgcac-tttcccccctatcttttgctaattgtgcgattttgcaccccc 195  Q
    |||||||||||||| ||| |||||||| |||||||||||||||||||||||||||||    
T  17372297 tggcttaattgcaccttttccccctattttttgctaattgtgcgattttgcaccccc 17372353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 141 - 231
Target Start/End: Complemental strand, 18875245 - 18875155
Alignment:
Q  141 ggcttaattgcactttc-ccccctatcttttgctaattgtgcgattttgcacccccctcnnnnnnnnngagcgattttgcaccccatctttt 231  Q
    ||||||||||||||||  |||||||||||||||||||||| ||||||||||| ||||||         ||||||||||||||||||||||||    
T  18875245 ggcttaattgcacttttgccccctatcttttgctaattgtacgattttgcac-cccctctttttttttgagcgattttgcaccccatctttt 18875155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 144 - 194
Target Start/End: Complemental strand, 1928484 - 1928434
Alignment:
Q  144 ttaattgcactttcccccctatcttttgctaattgtgcgattttgcacccc 194  Q
    ||||||||| ||||| ||||||||||||| |||||||||||||||||||||    
T  1928484 ttaattgcattttcctccctatcttttgccaattgtgcgattttgcacccc 1928434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 140 - 194
Target Start/End: Complemental strand, 9027087 - 9027033
Alignment:
Q  140 tggcttaattgcactttcccccctatcttttgctaattgtgcgattttgcacccc 194  Q
    |||||||||| |||||| |||||||||||||||||||||||| ||||| ||||||    
T  9027087 tggcttaatttcacttttccccctatcttttgctaattgtgcaattttacacccc 9027033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 159 - 244
Target Start/End: Original strand, 10293627 - 10293711
Alignment:
Q  159 cccctatcttttgctaattgtgcgattttgcacccccctcnnnnnnnnngagcgattttgcaccccatctttttgccccctctctg 244  Q
    |||||||||||||  |||||||||||||||||||||| ||         |||||||||||||||||||||||||||||||| ||||    
T  10293627 cccctatcttttgtcaattgtgcgattttgcaccccc-tctttttttttgagcgattttgcaccccatctttttgccccctttctg 10293711  T

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Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 144 - 194
Target Start/End: Complemental strand, 14016014 - 14015964
Alignment:
Q  144 ttaattgcactttcccccctatcttttgctaattgtgcgattttgcacccc 194  Q
    ||||||||||||| |  ||||||||||||||||||||||||||||||||||    
T  14016014 ttaattgcacttttcatcctatcttttgctaattgtgcgattttgcacccc 14015964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 140 - 190
Target Start/End: Complemental strand, 42627600 - 42627550
Alignment:
Q  140 tggcttaattgcactttcccccctatcttttgctaattgtgcgattttgca 190  Q
    ||||||||||||||||| ||| ||||||||||||||||||| |||||||||    
T  42627600 tggcttaattgcacttttccctctatcttttgctaattgtgtgattttgca 42627550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 140 - 194
Target Start/End: Original strand, 42672977 - 42673031
Alignment:
Q  140 tggcttaattgcactttcccccctatcttttgctaattgtgcgattttgcacccc 194  Q
    ||||||||||||||||| ||||||||  ||||| |||||||||||||||||||||    
T  42672977 tggcttaattgcacttttccccctatagtttgccaattgtgcgattttgcacccc 42673031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 133 - 194
Target Start/End: Complemental strand, 48160395 - 48160333
Alignment:
Q  133 atttatttggcttaattgcactttcccccc-tatcttttgctaattgtgcgattttgcacccc 194  Q
    |||| ||||||||||||||||||||||||| |||  ||||| |||||||||||||||||||||    
T  48160395 atttttttggcttaattgcactttccccccctatagtttgccaattgtgcgattttgcacccc 48160333  T

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Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 140 - 231
Target Start/End: Original strand, 13657444 - 13657536
Alignment:
Q  140 tggcttaattgcactttcccccctatctttt-gctaattgtgcgattttgcacccccctcnnnnnnnnngagcgattttgcaccccatctttt 231  Q
    |||||||||| |||||| | |||||| |||| || |||||||||||||||||||||||||         ||||||||||||||||||||||||    
T  13657444 tggcttaattacacttttctccctatttttttgccaattgtgcgattttgcacccccctctttttttttgagcgattttgcaccccatctttt 13657536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 141 - 193
Target Start/End: Original strand, 18874882 - 18874935
Alignment:
Q  141 ggcttaattgcactttc-ccccctatcttttgctaattgtgcgattttgcaccc 193  Q
    |||| |||||||||||  ||||||||||||||||||||||||||||||||||||    
T  18874882 ggctcaattgcactttttccccctatcttttgctaattgtgcgattttgcaccc 18874935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 141 - 193
Target Start/End: Complemental strand, 45060925 - 45060872
Alignment:
Q  141 ggcttaattgcactttcc-cccctatcttttgctaattgtgcgattttgcaccc 193  Q
    |||||||||||||||| | ||||||||||||||||||||||||||||| |||||    
T  45060925 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttacaccc 45060872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 138 - 191
Target Start/End: Complemental strand, 53688359 - 53688306
Alignment:
Q  138 tttggcttaattgcactttcccccctatcttttgctaattgtgcgattttgcac 191  Q
    |||||||||||||||||||| |||||||  ||||| ||||||||||||||||||    
T  53688359 tttggcttaattgcactttctcccctatagtttgccaattgtgcgattttgcac 53688306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 138 - 194
Target Start/End: Complemental strand, 24485516 - 24485460
Alignment:
Q  138 tttggcttaattgcactttcccccctatcttttgctaattgtgcgattttgcacccc 194  Q
    ||||||||||||||||||| | ||||||  ||||| |||||||||||||||||||||    
T  24485516 tttggcttaattgcacttttctccctatagtttgccaattgtgcgattttgcacccc 24485460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 138 - 194
Target Start/End: Complemental strand, 42673352 - 42673296
Alignment:
Q  138 tttggcttaattgcactttcccccctatcttttgctaattgtgcgattttgcacccc 194  Q
    ||||||||||||||||||| ||||||||  ||||  |||||||||||||||||||||    
T  42673352 tttggcttaattgcacttttccccctatagtttgtcaattgtgcgattttgcacccc 42673296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 141 - 194
Target Start/End: Original strand, 47870823 - 47870877
Alignment:
Q  141 ggcttaattgcactttcccccctatcttttgctaattgtgcg-attttgcacccc 194  Q
    ||||||||||||||||  ||||||||||||||||||| |||| ||||||||||||    
T  47870823 ggcttaattgcactttttcccctatcttttgctaattatgcgaattttgcacccc 47870877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 141 - 194
Target Start/End: Original strand, 48159897 - 48159951
Alignment:
Q  141 ggcttaattgcacttt-cccccctatcttttgctaattgtgcgattttgcacccc 194  Q
    |||||||||||||||| |||||||||  ||||| |||||||||||||||||||||    
T  48159897 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 48159951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 138 - 194
Target Start/End: Complemental strand, 3644840 - 3644783
Alignment:
Q  138 tttggcttaattgcactttcccccct-atcttttgctaattgtgcgattttgcacccc 194  Q
    ||||||||||||||| ||| |||||| || ||||| ||||||||||||||||||||||    
T  3644840 tttggcttaattgcatttttcccccttattttttgttaattgtgcgattttgcacccc 3644783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 141 - 194
Target Start/End: Original strand, 26007182 - 26007235
Alignment:
Q  141 ggcttaattgcactttcccccctatcttttgctaattgtgcgattttgcacccc 194  Q
    |||||||||||| ||||||||||||  ||||  |||||||||||||||||||||    
T  26007182 ggcttaattgcattttcccccctatagtttgtcaattgtgcgattttgcacccc 26007235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 141 - 194
Target Start/End: Original strand, 40848521 - 40848574
Alignment:
Q  141 ggcttaattgcactttcccccctatcttttgctaattgtgcgattttgcacccc 194  Q
    |||||||||||||||| ||||||||  ||||| |||||||||||||| ||||||    
T  40848521 ggcttaattgcacttttccccctatagtttgccaattgtgcgattttacacccc 40848574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 140 - 188
Target Start/End: Original strand, 45060595 - 45060644
Alignment:
Q  140 tggcttaattgcactttccccc-ctatcttttgctaattgtgcgattttg 188  Q
    ||||||||||||||||| |||| |||||||||||||||| ||||||||||    
T  45060595 tggcttaattgcacttttccccactatcttttgctaattatgcgattttg 45060644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 193
Target Start/End: Original strand, 1100908 - 1100968
Alignment:
Q  134 tttatttggcttaattgcactt-tcccccctatcttttgctaattgtgcgattttgcaccc 193  Q
    |||||| | ||||||||||||| ||| ||||||||||||| |||||||||||||| |||||    
T  1100908 tttattagacttaattgcacttatccaccctatcttttgcaaattgtgcgatttttcaccc 1100968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 102
Target Start/End: Complemental strand, 15548968 - 15548876
Alignment:
Q  10 ttgatgataagtgtgcttgatgactacttgatcgtgatatttgggattgttatgtgaatgtgtatattgaattaactatttatgtgaagtact 102  Q
    |||||||||| |||||||| ||| |||||||| ||  ||| | ||| |||||||| ||||   |||||||||||||| ||||||| |||||||    
T  15548968 ttgatgataaatgtgcttggtgaatacttgattgtattatcttggaatgttatgtaaatgcacatattgaattaactgtttatgttaagtact 15548876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 194
Target Start/End: Complemental strand, 17372645 - 17372594
Alignment:
Q  142 gcttaattgcactttcccccctatcttttgctaattgtgcgattttgcacccc 194  Q
    ||||||||||||||| |||| ||| |||| |||||||||||||||||||||||    
T  17372645 gcttaattgcacttttcccc-tatattttactaattgtgcgattttgcacccc 17372594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 139 - 193
Target Start/End: Original strand, 8314011 - 8314066
Alignment:
Q  139 ttggcttaattgcactttcc-cccctatcttttgctaattgtgcgattttgcaccc 193  Q
    |||||||||||||||||| | ||||||| |||||  ||||||||||||||||||||    
T  8314011 ttggcttaattgcacttttctcccctatattttgtcaattgtgcgattttgcaccc 8314066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 209 - 244
Target Start/End: Original strand, 18874957 - 18874992
Alignment:
Q  209 agcgattttgcaccccatctttttgccccctctctg 244  Q
    ||||||||||||||||||||||||||||||| ||||    
T  18874957 agcgattttgcaccccatctttttgccccctttctg 18874992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 131 - 193
Target Start/End: Original strand, 22429148 - 22429211
Alignment:
Q  131 aaatttatttggcttaattgcac-tttcccccctatcttttgctaattgtgcgattttgcaccc 193  Q
    ||||||| || |||||||||||| |||| ||||||| |||||| |||||||||| |||||||||    
T  22429148 aaatttaatttgcttaattgcacttttctcccctatattttgccaattgtgcgactttgcaccc 22429211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 143 - 194
Target Start/End: Complemental strand, 22429647 - 22429596
Alignment:
Q  143 cttaattgcactttcccccctatcttttgctaattgtgcgattttgcacccc 194  Q
    ||||||||||||||||| |||||  ||||  |||||||||||||||||||||    
T  22429647 cttaattgcactttccctcctatagtttgtcaattgtgcgattttgcacccc 22429596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 148 - 187
Target Start/End: Complemental strand, 26540915 - 26540876
Alignment:
Q  148 ttgcactttcccccctatcttttgctaattgtgcgatttt 187  Q
    |||||| || ||||||||||||||||||||||||||||||    
T  26540915 ttgcacctttccccctatcttttgctaattgtgcgatttt 26540876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 102
Target Start/End: Complemental strand, 34558332 - 34558237
Alignment:
Q  7 ttgttgatgataagtgtgcttgatgactacttgatcgtgatatttgggattgttatgtgaatgtgtatattgaattaactatttatgtgaagtact 102  Q
    ||||||||||||||||| |||| ||| |||||| | ||  ||||| | | |||||||| ||| |  |||||||||||||| ||||||| |||||||    
T  34558332 ttgttgatgataagtgtacttggtgaatacttggttgtattattttgaaatgttatgtaaatatacatattgaattaactgtttatgttaagtact 34558237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 140 - 194
Target Start/End: Complemental strand, 47666390 - 47666335
Alignment:
Q  140 tggcttaattgcacttt-cccccctatcttttgctaattgtgcgattttgcacccc 194  Q
    ||||||||||||||||| |||||||||  ||||| |||||||| ||||||||||||    
T  47666390 tggcttaattgcacttttcccccctatagtttgccaattgtgcaattttgcacccc 47666335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 194
Target Start/End: Original strand, 9026739 - 9026789
Alignment:
Q  144 ttaattgcactttcccccctatcttttgctaattgtgcgattttgcacccc 194  Q
    ||||||||| ||| || ||||||||||| ||||||||| ||||||||||||    
T  9026739 ttaattgcatttttcctcctatcttttgttaattgtgcaattttgcacccc 9026789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 198
Target Start/End: Original strand, 18875017 - 18875071
Alignment:
Q  146 aattgcactttc-ccccctatctttt-gctaattgtgcgattttgcacccccctc 198  Q
    |||||||||||  ||||||||||||| |||||||||||||||||||||| |||||    
T  18875017 aattgcacttttgccccctatctttttgctaattgtgcgattttgcacctccctc 18875071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 194
Target Start/End: Complemental strand, 21896565 - 21896511
Alignment:
Q  140 tggcttaattgcactttcccccctatcttttgctaattgtgcgattttgcacccc 194  Q
    ||||||||||||| |||  ||||||| |||||  |||||||||||||||||||||    
T  21896565 tggcttaattgcattttttcccctatattttgtcaattgtgcgattttgcacccc 21896511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 194
Target Start/End: Complemental strand, 40849015 - 40848961
Alignment:
Q  141 ggcttaattgcactttccccc-ctatcttttgctaattgtgcgattttgcacccc 194  Q
    |||||||||||||||| |||| ||||  ||||| |||||||||||||||||||||    
T  40849015 ggcttaattgcacttttcccctctatagtttgccaattgtgcgattttgcacccc 40848961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 194
Target Start/End: Original strand, 53687888 - 53687942
Alignment:
Q  141 ggcttaattgcacttt-cccccctatcttttgctaattgtgcgattttgcacccc 194  Q
    |||||||||||||||| |||||||||  ||||  |||||||||||||||||||||    
T  53687888 ggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcacccc 53687942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 141 - 193
Target Start/End: Complemental strand, 1101235 - 1101182
Alignment:
Q  141 ggcttaattgcactttcccccct-atcttttgctaattgtgcgattttgcaccc 193  Q
    |||||||||||||||| |||||| ||||||||||  |||||||||||| |||||    
T  1101235 ggcttaattgcacttttcccccttatcttttgctttttgtgcgatttttcaccc 1101182  T

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Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 145 - 193
Target Start/End: Original strand, 4947263 - 4947312
Alignment:
Q  145 taattgcactttcc-cccctatcttttgctaattgtgcgattttgcaccc 193  Q
    |||||||||||| | ||||||| ||||| |||||||||||||||||||||    
T  4947263 taattgcacttttcacccctattttttgttaattgtgcgattttgcaccc 4947312  T

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Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 138 - 194
Target Start/End: Complemental strand, 27238957 - 27238900
Alignment:
Q  138 tttggcttaattgcactttccccc-ctatcttttgctaattgtgcgattttgcacccc 194  Q
    ||||| ||||||||||||| |||| ||||  ||||| |||||||||||||||||||||    
T  27238957 tttggtttaattgcacttttcccctctatagtttgccaattgtgcgattttgcacccc 27238900  T

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Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 141 - 193
Target Start/End: Complemental strand, 53766633 - 53766580
Alignment:
Q  141 ggcttaattgcacttt-cccccctatcttttgctaattgtgcgattttgcaccc 193  Q
    |||||||||||||||| |||||||||  ||||| |||||||| |||||||||||    
T  53766633 ggcttaattgcacttttcccccctatagtttgcaaattgtgcaattttgcaccc 53766580  T

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Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 195
Target Start/End: Complemental strand, 1101141 - 1101089
Alignment:
Q  144 ttaattgcactttcccccctatcttttgct-aattgtgcgattttgcaccccc 195  Q
    |||||||||||||  ||||||||||||  | ||||||||||||||||||||||    
T  1101141 ttaattgcacttttgcccctatctttttgtcaattgtgcgattttgcaccccc 1101089  T

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Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 192
Target Start/End: Complemental strand, 3353597 - 3353553
Alignment:
Q  148 ttgcactttcccccctatcttttgctaattgtgcgattttgcacc 192  Q
    ||||||||| ||||||||  ||||| |||||||||||||||||||    
T  3353597 ttgcacttttccccctatagtttgccaattgtgcgattttgcacc 3353553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 181
Target Start/End: Complemental strand, 13657783 - 13657735
Alignment:
Q  134 tttatttggcttaattgcac-tttcccccctatcttttgctaattgtgc 181  Q
    |||||||||||||||||||| |||| | | |||||||||||||||||||    
T  13657783 tttatttggcttaattgcacttttctctcatatcttttgctaattgtgc 13657735  T

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Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 185
Target Start/End: Original strand, 17440763 - 17440806
Alignment:
Q  141 ggcttaattgcactttcccccctatcttttgctaattgtgcgatt 185  Q
    |||||||||||||||||| || |||| ||||||||||||||||||    
T  17440763 ggcttaattgcactttcctcc-tatcatttgctaattgtgcgatt 17440806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 194
Target Start/End: Original strand, 21895657 - 21895712
Alignment:
Q  141 ggcttaattgcacttt--cccccctatcttttgctaattgtgcgattttgcacccc 194  Q
    ||||||||||||||||  |||| |||| |||||| ||||||| |||||||||||||    
T  21895657 ggcttaattgcactttttccccactatgttttgccaattgtgtgattttgcacccc 21895712  T

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Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 194
Target Start/End: Complemental strand, 23630091 - 23630035
Alignment:
Q  139 ttggcttaattgcactttcccc-cctatcttttgctaattgtgcgattttgcacccc 194  Q
    |||| |||||||||||||  || ||||| ||||| ||||||||||||||||||||||    
T  23630091 ttggtttaattgcactttttcctcctattttttggtaattgtgcgattttgcacccc 23630035  T

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Target: scaffold0357 (Bit Score: 92; Significance: 9e-45; HSPs: 1)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 6207 - 6068
Alignment:
Q  1 tgataattgttgatgataagtgtgcttgatgactacttgatcgtgatatttgggattgttatgtgaatgtgtatattgaattaactatttatgtgaagta 100  Q
    |||||||||||||||||||||||||| | ||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  6207 tgataattgttgatgataagtgtgctcggtgaatacttgatcgtgatagttgggattgttatgtgaatgtgtatattgaattaactgtttatgtgaagta 6108  T
Q  101 ctcgaaaaagattttaattcatatatgctcaaatttattt 140  Q
    || | ||  || || ||||||||||||||||||| |||||    
T  6107 cttggaattgacttcaattcatatatgctcaaatctattt 6068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 92; Significance: 9e-45; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 25664 - 25795
Alignment:
Q  1 tgataattgttgatgataagtgtgcttgatgactacttgatcgtgatatttgggattgttatgtgaatgtgtatattgaattaactatttatgtgaagta 100  Q
    |||||||||||||||||||||||||||| ||| |||||||||||| |||||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  25664 tgataattgttgatgataagtgtgcttggtgagtacttgatcgtgctatttgagattgttatgtgaatgtgtatattgaattaactgtttatgtgaagta 25763  T
Q  101 ctcgaaaaagattttaattcatatatgctcaa 132  Q
     || |||   ||||||||||||||||||||||    
T  25764 ttcaaaatttattttaattcatatatgctcaa 25795  T

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Target: chr4 (Bit Score: 92; Significance: 9e-45; HSPs: 60)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 38763254 - 38763115
Alignment:
Q  1 tgataattgttgatgataagtgtgcttgatgactacttgatcgtgatatttgggattgttatgtgaatgtgtatattgaattaactatttatgtgaagta 100  Q
    |||||||||||||||||||||||||||| ||| ||||||||| |||||||||  |||||||||||||||||||||||||||||||| |||||||||| ||    
T  38763254 tgataattgttgatgataagtgtgcttggtgaatacttgatcatgatatttgaaattgttatgtgaatgtgtatattgaattaactgtttatgtgaaata 38763155  T
Q  101 ctcgaaaaagattttaattcatatatgctcaaatttattt 140  Q
    |||| ||  || |||||||||||||||||||||| |||||    
T  38763154 ctcggaattgactttaattcatatatgctcaaatctattt 38763115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 13 - 140
Target Start/End: Original strand, 7187637 - 7187763
Alignment:
Q  13 atgataagtgtgcttgatgactacttgatcgtgatatttgggattgttatgtgaatgtgtatattgaattaactatttatgtgaagtactcgaaaaagat 112  Q
    |||||||||||| ||| ||| |||||||||||| |||||||||||||||||||||||||||||||||||||| | | ||||||||||||  ||||  ||     
T  7187637 atgataagtgtgattggtgaatacttgatcgtgctatttgggattgttatgtgaatgtgtatattgaattaattgtctatgtgaagtacctgaaattga- 7187735  T
Q  113 tttaattcatatatgctcaaatttattt 140  Q
    |||||||| ||||||||||||| |||||    
T  7187736 tttaattcctatatgctcaaatctattt 7187763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 141 - 244
Target Start/End: Complemental strand, 3930533 - 3930431
Alignment:
Q  141 ggcttaattgcactttcccccctatcttttgctaattgtgcgattttgcacccccctcnnnnnnnnngagcgattttgcaccccatctttttgccccctc 240  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||          |||||||||||||||||||||||||||||||     
T  3930533 ggcttaattgcacttttccccctatcttttgctaattgtgcgattttgcac-cccctcttttttttttagcgattttgcaccccatctttttgccccctt 3930435  T
Q  241 tctg 244  Q
    ||||    
T  3930434 tctg 3930431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 139 - 244
Target Start/End: Complemental strand, 16555873 - 16555768
Alignment:
Q  139 ttggcttaattgcactttcccccct-atcttttgctaattgtgcgattttgcacccccctcnnnnnnnnngagcgattttgcaccccatctttttgcccc 237  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||||||||| |||| ||         ||||||||||||||||||||||||||||||    
T  16555873 ttggcttaattgcacttttcccccttatcttttgctaattgtgcgattttgca-ccccatctttttttttgagcgattttgcaccccatctttttgcccc 16555775  T
Q  238 ctctctg 244  Q
    || ||||    
T  16555774 ctttctg 16555768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 133 - 195
Target Start/End: Original strand, 22681567 - 22681629
Alignment:
Q  133 atttatttggcttaattgcactttcccccctatcttttgctaattgtgcgattttgcaccccc 195  Q
    ||||| || ||||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  22681567 atttaattagcttaattgcactttcccccctatcttttgtcaattgtgcgattttgcaccccc 22681629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 141 - 195
Target Start/End: Complemental strand, 13198960 - 13198905
Alignment:
Q  141 ggcttaattgcacttt-cccccctatcttttgctaattgtgcgattttgcaccccc 195  Q
    |||||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  13198960 ggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgcaccccc 13198905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 141 - 195
Target Start/End: Complemental strand, 35393829 - 35393775
Alignment:
Q  141 ggcttaattgcactttcccccctatcttttgctaattgtgcgattttgcaccccc 195  Q
    |||||||||||||||| | |||||||||||||||||||||||| |||||||||||    
T  35393829 ggcttaattgcacttttcaccctatcttttgctaattgtgcgaatttgcaccccc 35393775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 141 - 194
Target Start/End: Original strand, 56505693 - 56505747
Alignment:
Q  141 ggcttaattgcacttt-cccccctatcttttgctaattgtgcgattttgcacccc 194  Q
    |||||||||||||||| |||||||||||||||| |||||||||||||||||||||    
T  56505693 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 56505747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 12732652 - 12732552
Alignment:
Q  1 tgataattgttgatgataagtgtgcttgatgactacttgatcgtgatatttgggattgttatgtgaatgtgtatattgaattaactatttatgtgaagta 100  Q
    |||| ||| ||||||||||||||||||||||| |||||  ||||||||||||  |||||||||||||  | ||||||||||||| |  |||||| |||||    
T  12732652 tgatgattattgatgataagtgtgcttgatgagtacttattcgtgatatttgaaattgttatgtgaaact-tatattgaattaaatgcttatgttaagta 12732554  T
Q  101 ct 102  Q
    ||    
T  12732553 ct 12732552  T

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Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 141 - 194
Target Start/End: Original strand, 26207361 - 26207414
Alignment:
Q  141 ggcttaattgcactttcccccctatcttttgctaattgtgcgattttgcacccc 194  Q
    |||||||||||||||||||||||||  ||||| |||||||||||||||||||||    
T  26207361 ggcttaattgcactttcccccctatagtttgccaattgtgcgattttgcacccc 26207414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 141 - 195
Target Start/End: Original strand, 16555515 - 16555570
Alignment:
Q  141 ggcttaattgcactttcccccct-atcttttgctaattgtgcgattttgcaccccc 195  Q
    |||||||||||||||| |||||| |||||||| |||||||||||||||||||||||    
T  16555515 ggcttaattgcacttttcccccttatcttttgttaattgtgcgattttgcaccccc 16555570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 141 - 195
Target Start/End: Complemental strand, 18077256 - 18077201
Alignment:
Q  141 ggcttaattgcactttcc-cccctatcttttgctaattgtgcgattttgcaccccc 195  Q
    |||||||||||||||| | ||||||| |||||||||||||||||||||||||||||    
T  18077256 ggcttaattgcacttttcacccctattttttgctaattgtgcgattttgcaccccc 18077201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 132 - 194
Target Start/End: Complemental strand, 11241723 - 11241661
Alignment:
Q  132 aatttatttggcttaattgcactttcccccctatcttttgctaattgtgcgattttgcacccc 194  Q
    |||| ||| |||||||||| ||||| ||||||||||||||| ||||||| |||||||||||||    
T  11241723 aattaattaggcttaattgtacttttccccctatcttttgccaattgtgggattttgcacccc 11241661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 141 - 194
Target Start/End: Original strand, 50678779 - 50678833
Alignment:
Q  141 ggcttaattgcactttcc-cccctatcttttgctaattgtgcgattttgcacccc 194  Q
    |||||||||||||||| | |||||||||||||| |||||||||||||||||||||    
T  50678779 ggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacccc 50678833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 138 - 195
Target Start/End: Original strand, 3930176 - 3930233
Alignment:
Q  138 tttggcttaattgcactttcccccctatcttttgctaattgtgcgattttgcaccccc 195  Q
    |||||||||||||||||||  ||||||||||||  ||||| |||||||||||||||||    
T  3930176 tttggcttaattgcactttttcccctatcttttattaattatgcgattttgcaccccc 3930233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 195
Target Start/End: Complemental strand, 8488534 - 8488481
Alignment:
Q  142 gcttaattgcactttcccccctatcttttgctaattgtgcgattttgcaccccc 195  Q
    ||||||||||||||| | || |||||||| ||||||||||||||||||||||||    
T  8488534 gcttaattgcacttttcgccttatctttttctaattgtgcgattttgcaccccc 8488481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 138 - 194
Target Start/End: Complemental strand, 32703707 - 32703650
Alignment:
Q  138 tttggcttaattgcacttt-cccccctatcttttgctaattgtgcgattttgcacccc 194  Q
    ||||||||||||||||||| |||||||||  ||||| |||||||||||||||||||||    
T  32703707 tttggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 32703650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 138 - 194
Target Start/End: Complemental strand, 36096532 - 36096475
Alignment:
Q  138 tttggcttaattgcactttcc-cccctatcttttgctaattgtgcgattttgcacccc 194  Q
    ||||| ||||||||||||| | |||||||||||||| |||||||||||||||||||||    
T  36096532 tttggtttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacccc 36096475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 139 - 195
Target Start/End: Original strand, 27304716 - 27304771
Alignment:
Q  139 ttggcttaattgcactttcccccctatcttttgctaattgtgcgattttgcaccccc 195  Q
    ||||||||||||| |||| |||| |||||| ||||||||||||||||||||||||||    
T  27304716 ttggcttaattgcccttttcccc-tatcttctgctaattgtgcgattttgcaccccc 27304771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 139 - 194
Target Start/End: Complemental strand, 50679480 - 50679424
Alignment:
Q  139 ttggcttaattgcactttcc-cccctatcttttgctaattgtgcgattttgcacccc 194  Q
    |||||||||||||||||| | |||||||||||||| |||||| ||||||||||||||    
T  50679480 ttggcttaattgcacttttcacccctatcttttgccaattgtacgattttgcacccc 50679424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 198
Target Start/End: Complemental strand, 8182227 - 8182168
Alignment:
Q  141 ggcttaattgcactttcc-cccctatctttt-gctaattgtgcgattttgcacccccctc 198  Q
    |||||||||||||||| | ||||||| |||| ||||||||||||||||||||||||||||    
T  8182227 ggcttaattgcacttttcacccctatttttttgctaattgtgcgattttgcacccccctc 8182168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 134
Target Start/End: Complemental strand, 18275280 - 18275154
Alignment:
Q  7 ttgttgatgataagtgtgcttgatgactacttgatcgtgatatttgggattgttatgtgaatgtgtatattgaattaactatttatgtgaagtactcgaa 106  Q
    |||||||||||||||||||||| ||| || ||||||||  ||||| ||| |||||||| |||||  |||||  ||||||  ||||||| |||| || | |    
T  18275280 ttgttgatgataagtgtgcttggtgaatagttgatcgtattattttggaatgttatgtaaatgtacatattcgattaaccgtttatgttaagtgcttgga 18275181  T
Q  107 aaagattttaattcatatatgctcaaat 134  Q
    |  || ||||| ||||||||||||||||    
T  18275180 attga-tttaactcatatatgctcaaat 18275154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 145 - 195
Target Start/End: Complemental strand, 49178866 - 49178815
Alignment:
Q  145 taattgcactttcc-cccctatcttttgctaattgtgcgattttgcaccccc 195  Q
    |||||||||||| | |||||||||||||| ||||||||||||||||||||||    
T  49178866 taattgcacttttctcccctatcttttgccaattgtgcgattttgcaccccc 49178815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 163 - 244
Target Start/End: Original strand, 13198626 - 13198707
Alignment:
Q  163 tatcttttgctaattgtgcgattttgcacccccctcnnnnnnnnngagcgattttgcaccccatctttttgccccctctctg 244  Q
    |||||||||| ||||||||||||||||||||||            |||||||||||||||||||||||||||||||| ||||    
T  13198626 tatcttttgccaattgtgcgattttgcaccccctcttttttttttgagcgattttgcaccccatctttttgccccctttctg 13198707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 141 - 194
Target Start/End: Complemental strand, 24775837 - 24775783
Alignment:
Q  141 ggcttaattgcactttcccc-cctatcttttgctaattgtgcgattttgcacccc 194  Q
    |||||||||||||||| ||| |||||||||||  |||||||||||||||||||||    
T  24775837 ggcttaattgcacttttccctcctatcttttgtcaattgtgcgattttgcacccc 24775783  T

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Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 141 - 194
Target Start/End: Original strand, 28196346 - 28196400
Alignment:
Q  141 ggcttaattgcacttt-cccccctatcttttgctaattgtgcgattttgcacccc 194  Q
    |||||||||||||||| |||||||||  ||||| |||||||||||||||||||||    
T  28196346 ggcttaattgcacttttcccccctataatttgccaattgtgcgattttgcacccc 28196400  T

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Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 141 - 194
Target Start/End: Complemental strand, 28196827 - 28196773
Alignment:
Q  141 ggcttaattgcacttt-cccccctatcttttgctaattgtgcgattttgcacccc 194  Q
    |||||||||||||||| |||||||||  ||||| |||||||||||||||||||||    
T  28196827 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 28196773  T

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Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 141 - 194
Target Start/End: Original strand, 36095817 - 36095871
Alignment:
Q  141 ggcttaattgcactttcc-cccctatcttttgctaattgtgcgattttgcacccc 194  Q
    |||||||||||| ||| | |||||||||||||| |||||||||||||||||||||    
T  36095817 ggcttaattgcatttttcacccctatcttttgccaattgtgcgattttgcacccc 36095871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 139 - 193
Target Start/End: Complemental strand, 48406440 - 48406386
Alignment:
Q  139 ttggcttaattgcactttcccccctatcttttgctaattgtgcgattttgcaccc 193  Q
    |||| ||||||| ||||||||||||||  ||||| ||||||||||||||||||||    
T  48406440 ttggtttaattgtactttcccccctataatttgccaattgtgcgattttgcaccc 48406386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 139 - 195
Target Start/End: Original strand, 11241387 - 11241444
Alignment:
Q  139 ttggcttaattgcactttcccccct-atcttttgctaattgtgcgattttgcaccccc 195  Q
    |||||||||||||||||| || ||| |||||||| |||||||||||||||||| ||||    
T  11241387 ttggcttaattgcacttttcctccttatcttttgttaattgtgcgattttgcatcccc 11241444  T

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Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 141 - 194
Target Start/End: Original strand, 23539841 - 23539893
Alignment:
Q  141 ggcttaattgcactttcccccctatcttttgctaattgtgcgattttgcacccc 194  Q
    ||||||||||||||||||||| |||  ||||| |||||||||||||||||||||    
T  23539841 ggcttaattgcactttccccc-tatagtttgccaattgtgcgattttgcacccc 23539893  T

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Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 142 - 194
Target Start/End: Original strand, 25161879 - 25161932
Alignment:
Q  142 gcttaattgcacttt-cccccctatcttttgctaattgtgcgattttgcacccc 194  Q
    ||||||||||||||| |||||||||  ||||| |||||||||||||||||||||    
T  25161879 gcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 25161932  T

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Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 160 - 193
Target Start/End: Original strand, 39415244 - 39415277
Alignment:
Q  160 ccctatcttttgctaattgtgcgattttgcaccc 193  Q
    ||||||||||||||||||||||||||||||||||    
T  39415244 ccctatcttttgctaattgtgcgattttgcaccc 39415277  T

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Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 194
Target Start/End: Complemental strand, 4239422 - 4239366
Alignment:
Q  139 ttggcttaattgcactttc-ccccctatcttttgctaattgtgcgattttgcacccc 194  Q
    ||||||||||||||||||  ||||||||  ||||| |||||||||||||||||||||    
T  4239422 ttggcttaattgcactttttccccctatagtttgccaattgtgcgattttgcacccc 4239366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 192
Target Start/End: Complemental strand, 22681933 - 22681881
Alignment:
Q  141 ggcttaattgcactttcccc-cctatcttttgctaattgtgcgattttgcacc 192  Q
    |||||||||||||||| ||| ||||||||||| ||||||||| ||||||||||    
T  22681933 ggcttaattgcacttttccctcctatcttttgttaattgtgcaattttgcacc 22681881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 181
Target Start/End: Original strand, 49178526 - 49178574
Alignment:
Q  134 tttatttggcttaattgcac-tttcccccctatcttttgctaattgtgc 181  Q
    |||||||||||||||||||| |||| ||| |||||||||||||||||||    
T  49178526 tttatttggcttaattgcacttttctcccatatcttttgctaattgtgc 49178574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 140 - 191
Target Start/End: Complemental strand, 7603473 - 7603422
Alignment:
Q  140 tggcttaattgcactttcccccctatcttttgctaattgtgcgattttgcac 191  Q
    |||||||||||||||||  ||||||||||||   ||||||||||||||||||    
T  7603473 tggcttaattgcactttttcccctatctttttacaattgtgcgattttgcac 7603422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 142 - 195
Target Start/End: Original strand, 8181992 - 8182047
Alignment:
Q  142 gcttaattgcactttc-ccccctatc-ttttgctaattgtgcgattttgcaccccc 195  Q
    |||||||||||||||  ||||||||| |||||| ||||||||||||||||||||||    
T  8181992 gcttaattgcacttttgccccctatcgttttgccaattgtgcgattttgcaccccc 8182047  T

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Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 141 - 191
Target Start/End: Complemental strand, 9380795 - 9380744
Alignment:
Q  141 ggcttaattgcacttt-cccccctatcttttgctaattgtgcgattttgcac 191  Q
    |||||||||||||||| |||||||||  ||||| ||||||||||||||||||    
T  9380795 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcac 9380744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 146 - 195
Target Start/End: Complemental strand, 27304943 - 27304892
Alignment:
Q  146 aattgcactttc-ccccctatctttt-gctaattgtgcgattttgcaccccc 195  Q
    |||||||||||  ||||||||||||| |||||||||||||||||||||||||    
T  27304943 aattgcactttttccccctatctttttgctaattgtgcgattttgcaccccc 27304892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 50223856 - 50223931
Alignment:
Q  1 tgataattgttgatgataagtgtgcttgatgactacttgatcgtgatatttgggattgttatgtgaatgtgtatat 76  Q
    |||| ||||||||||||||||||| ||||||| ||| |  | ||||||||||| ||||||   |||||||||||||    
T  50223856 tgatgattgttgatgataagtgtgtttgatgaatacatacttgtgatatttggaattgttgcatgaatgtgtatat 50223931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 193
Target Start/End: Complemental strand, 54509151 - 54509116
Alignment:
Q  158 ccccctatcttttgctaattgtgcgattttgcaccc 193  Q
    |||||||| |||||||||||||||||||||||||||    
T  54509151 ccccctattttttgctaattgtgcgattttgcaccc 54509116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 194
Target Start/End: Original strand, 5205988 - 5206042
Alignment:
Q  141 ggcttaattgcactttccc-ccctatcttttgctaattgtgcgattttgcacccc 194  Q
    |||||||||||||||| || |||||||||||| |||||  |||||||||||||||    
T  5205988 ggcttaattgcacttttcctccctatcttttgttaatttggcgattttgcacccc 5206042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 193
Target Start/End: Complemental strand, 5206284 - 5206231
Alignment:
Q  140 tggcttaattgcactttcccccct-atcttttgctaattgtgcgattttgcaccc 193  Q
    ||||||||||||||||| |||||| |||||||  |||||||||||||||||||||    
T  5206284 tggcttaattgcacttttcccccttatcttttt-taattgtgcgattttgcaccc 5206231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 194
Target Start/End: Original strand, 9023244 - 9023298
Alignment:
Q  141 ggcttaattgcactttcc-cccctatcttttgctaattgtgcgattttgcacccc 194  Q
    |||||||||||||||| | |||||||  ||||| |||||||||||||||||||||    
T  9023244 ggcttaattgcacttttctcccctatagtttgccaattgtgcgattttgcacccc 9023298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 194
Target Start/End: Complemental strand, 9023734 - 9023680
Alignment:
Q  141 ggcttaattgcacttt-cccccctatcttttgctaattgtgcgattttgcacccc 194  Q
    |||||||||||||||| |||||||||  ||||  |||||||||||||||||||||    
T  9023734 ggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcacccc 9023680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 194
Target Start/End: Original strand, 9380307 - 9380361
Alignment:
Q  141 ggcttaattgcacttt-cccccctatcttttgctaattgtgcgattttgcacccc 194  Q
    |||||||||||||||| |||||||||  ||||| |||||||||||||||| ||||    
T  9380307 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcccccc 9380361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 194
Target Start/End: Complemental strand, 26207800 - 26207746
Alignment:
Q  141 ggcttaattgcacttt-cccccctatcttttgctaattgtgcgattttgcacccc 194  Q
    |||||||||||| ||| |||||||||  ||||| |||||||||||||||||||||    
T  26207800 ggcttaattgcatttttcccccctatagtttgccaattgtgcgattttgcacccc 26207746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 194
Target Start/End: Original strand, 32703225 - 32703279
Alignment:
Q  141 ggcttaattgcacttt-cccccctatcttttgctaattgtgcgattttgcacccc 194  Q
    |||||||||||||||| |||||||||  ||||| |||||||||||| ||||||||    
T  32703225 ggcttaattgcacttttcccccctataatttgccaattgtgcgattatgcacccc 32703279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 194
Target Start/End: Complemental strand, 39744519 - 39744465
Alignment:
Q  141 ggcttaattgcacttt-cccccctatcttttgctaattgtgcgattttgcacccc 194  Q
    |||||||||||||||| |||||||||  ||||  |||||||||||||||||||||    
T  39744519 ggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcacccc 39744465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 194
Target Start/End: Complemental strand, 43051306 - 43051252
Alignment:
Q  141 ggcttaattgcactttcc-cccctatcttttgctaattgtgcgattttgcacccc 194  Q
    |||||||||||| ||| | |||||||||||||| ||||||| |||||||||||||    
T  43051306 ggcttaattgcatttttcacccctatcttttgccaattgtgtgattttgcacccc 43051252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 192
Target Start/End: Complemental strand, 47219233 - 47219203
Alignment:
Q  162 ctatcttttgctaattgtgcgattttgcacc 192  Q
    |||||||||||||||||||||||||||||||    
T  47219233 ctatcttttgctaattgtgcgattttgcacc 47219203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 138 - 194
Target Start/End: Complemental strand, 169496 - 169439
Alignment:
Q  138 tttggcttaattgcacttt-cccccctatcttttgctaattgtgcgattttgcacccc 194  Q
    ||||||||||||||| ||| |||||||||  ||||  |||||||||||||||||||||    
T  169496 tttggcttaattgcatttttcccccctatagtttgtcaattgtgcgattttgcacccc 169439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 142 - 195
Target Start/End: Original strand, 7603146 - 7603198
Alignment:
Q  142 gcttaattgcactttcccccctatcttttgctaattgtgcgattttgcaccccc 195  Q
    ||||||||||||||| |||| ||||||||  ||||||||| |||||||||||||    
T  7603146 gcttaattgcacttttcccc-tatctttttttaattgtgcaattttgcaccccc 7603198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 142 - 194
Target Start/End: Original strand, 11529169 - 11529222
Alignment:
Q  142 gcttaattgcactttccc-ccctatcttttgctaattgtgcgattttgcacccc 194  Q
    ||||||||||||||| || ||||| ||||||| ||||||| |||||||||||||    
T  11529169 gcttaattgcacttttcctccctaacttttgccaattgtgtgattttgcacccc 11529222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 141 - 193
Target Start/End: Complemental strand, 25225452 - 25225399
Alignment:
Q  141 ggcttaattgcactt-tcccccctatcttttgctaattgtgcgattttgcaccc 193  Q
    ||||||||||||||| |  | |||||||||||| ||||||||||||||||||||    
T  25225452 ggcttaattgcacttctgtctcctatcttttgccaattgtgcgattttgcaccc 25225399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 141 - 194
Target Start/End: Original strand, 48405962 - 48406015
Alignment:
Q  141 ggcttaattgcactttcccccctatcttttgctaattgtgcgattttgcacccc 194  Q
    |||||||||||||||| ||||||||  ||||| |||| ||| ||||||||||||    
T  48405962 ggcttaattgcacttttccccctatagtttgccaattatgcaattttgcacccc 48406015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 194
Target Start/End: Original strand, 169013 - 169068
Alignment:
Q  141 ggcttaattgcactttcc--cccctatcttttgctaattgtgcgattttgcacccc 194  Q
    |||||||||||||||| |  |||||||  ||||| |||||||||||||||||||||    
T  169013 ggcttaattgcacttttctccccctatagtttgccaattgtgcgattttgcacccc 169068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 212 - 244
Target Start/End: Complemental strand, 11241673 - 11241641
Alignment:
Q  212 gattttgcaccccatctttttgccccctctctg 244  Q
    |||||||||||||||||||||||||||| ||||    
T  11241673 gattttgcaccccatctttttgccccctttctg 11241641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 192
Target Start/End: Complemental strand, 16555743 - 16555695
Alignment:
Q  146 aattgcactttcccccct-atctttt-gctaattgtgcgattttgcacc 192  Q
    ||||||||||| |||||| ||||||| ||||||||||||||||||||||    
T  16555743 aattgcacttttcccccttatctttttgctaattgtgcgattttgcacc 16555695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 91; Significance: 3e-44; HSPs: 40)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 29604037 - 29603899
Alignment:
Q  1 tgataattgttgatgataagtgtgcttgatgactacttgatcgtgatatttgggattgttatgtgaatgtgtatattgaattaactatttatgtgaagta 100  Q
    |||||||||||||||||||||||||||| ||| |||||||| |||||||||| |||||||||||||||| |||||||||||||||| |||||||||||||    
T  29604037 tgataattgttgatgataagtgtgcttggtgaatacttgattgtgatatttgagattgttatgtgaatgagtatattgaattaactgtttatgtgaagta 29603938  T
Q  101 ctcgaaaaagattttaattcatatatgctcaaatttatt 139  Q
    || ||||  | |||||||||||  |||||||||||||||    
T  29603937 cttgaaattgtttttaattcatgaatgctcaaatttatt 29603899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 10 - 140
Target Start/End: Original strand, 33539936 - 33540066
Alignment:
Q  10 ttgatgataagtgtgcttgatgactacttgatcgtgatatttgggattgttatgtgaatgtgtatattgaattaactatttatgtgaagtactcgaaaaa 109  Q
    ||||||||||||||||||| | | ||||||||||| |||||| ||| |||||||| |||||  |||||||||||||| ||||||| |||| || | ||      
T  33539936 ttgatgataagtgtgcttggttaatacttgatcgtaatattttggaatgttatgtaaatgtacatattgaattaactgtttatgttaagtgcttggaatt 33540035  T
Q  110 gattttaattcatatatgctcaaatttattt 140  Q
    |||||||||||||||||||||| || |||||    
T  33540036 gattttaattcatatatgctcagatctattt 33540066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 141 - 244
Target Start/End: Complemental strand, 3404043 - 3403940
Alignment:
Q  141 ggcttaattgcacttt-cccccctatcttttgctaattgtgcgattttgcacccccctcnnnnnnnnngagcgattttgcaccccatctttttgccccct 239  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||         ||||||||||||||||||||||||||||||||    
T  3404043 ggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcac-cccctctttttttttgagcgattttgcaccccatctttttgccccct 3403945  T
Q  240 ctctg 244  Q
     ||||    
T  3403944 ttctg 3403940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 141 - 244
Target Start/End: Original strand, 21031979 - 21032081
Alignment:
Q  141 ggcttaattgcactttcccccctatcttttgctaattgtgcgattttgcacccccctcnnnnnnnnngagcgattttgcaccccatctttttgccccctc 240  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||         ||||||||||||||||||||||||||||||||     
T  21031979 ggcttaattgcacttttccccctaacttttgctaattgtgcgattttgca-ccccctctttttttttgagcgattttgcaccccatctttttgccccctt 21032077  T
Q  241 tctg 244  Q
    ||||    
T  21032078 tctg 21032081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 136 - 190
Target Start/End: Original strand, 30388057 - 30388111
Alignment:
Q  136 tatttggcttaattgcactttcccccctatcttttgctaattgtgcgattttgca 190  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30388057 tatttggcttaattgcactttcccccctatcttttgctaattgtgcgattttgca 30388111  T

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Target: chr6; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 22467798 - 22467899
Alignment:
Q  1 tgataattgttgatgataagtgtgcttgatgactacttgatcgtgatatttgggattgttatgtgaatgtgtatattgaattaactatttatgtgaagta 100  Q
    |||| ||| ||||||||||||||||||||||| |||||  ||||||||||||| |||||||||||||  ||||||||||||||| |  |||||| |||||    
T  22467798 tgatgattattgatgataagtgtgcttgatgagtacttattcgtgatatttggaattgttatgtgaagttgtatattgaattaaatgattatgttaagta 22467897  T
Q  101 ct 102  Q
    ||    
T  22467898 ct 22467899  T

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Target: chr6; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 11 - 100
Target Start/End: Complemental strand, 32350581 - 32350492
Alignment:
Q  11 tgatgataagtgtgcttgatgactacttgatcgtgatatttgggattgttatgtgaatgtgtatattgaattaactatttatgtgaagta 100  Q
    |||||||||||||||||| ||| ||||| ||||||||| |||| ||  |||||||||||||||||||||||||||| ||||||| |||||    
T  32350581 tgatgataagtgtgcttggtgagtacttaatcgtgataattggaatacttatgtgaatgtgtatattgaattaactgtttatgttaagta 32350492  T

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Target: chr6; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 10 - 134
Target Start/End: Complemental strand, 25649723 - 25649599
Alignment:
Q  10 ttgatgataagtgtgcttgatgactacttgatcgtgatatttgggattgttatgtgaatgtgtatattgaattaactatttatgtgaagtactcgaaaaa 109  Q
    ||||||||||||||||||| ||| ||||||||||| |||||| ||| |||||||| |||||  |||||||||||||| ||||||| |||| || | ||      
T  25649723 ttgatgataagtgtgcttggtgaatacttgatcgtaatattttggaatgttatgtaaatgtacatattgaattaactgtttatgtaaagtgcttggaatt 25649624  T
Q  110 gattttaattcatatatgctcaaat 134  Q
    ||||  ||||| |||||||||||||    
T  25649623 gattccaattcctatatgctcaaat 25649599  T

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Target: chr6; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 133 - 194
Target Start/End: Original strand, 3403709 - 3403771
Alignment:
Q  133 atttatttggcttaattgcacttt-cccccctatcttttgctaattgtgcgattttgcacccc 194  Q
    |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  3403709 atttctttggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcacccc 3403771  T

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Target: chr6; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 141 - 194
Target Start/End: Original strand, 10039676 - 10039729
Alignment:
Q  141 ggcttaattgcactttcccccctatcttttgctaattgtgcgattttgcacccc 194  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  10039676 ggcttaattgcacttttccccctatcttttgctaattgtgcgattttgcacccc 10039729  T

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Target: chr6; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 15006342 - 15006482
Alignment:
Q  1 tgataattgttgatgataagtgtgcttgatgactacttgatcgtgatatttgggattgttatgtgaatgtgtatattgaattaactatttatgtgaagta 100  Q
    |||| |||||||||||||| ||||||| |||| |||||  || |||||||||| ||||||||||||| ||||||||||||| || |  |||||| |||||    
T  15006342 tgatgattgttgatgataaatgtgcttcatgagtacttattcatgatatttggaattgttatgtgaaggtgtatattgaatcaaatgattatgttaagta 15006441  T
Q  101 ctcgaaaa--agattttaattcatatatgctcaaatttattt 140  Q
    || | |||   || ||||||||||||||| ||| ||||||||    
T  15006442 cttggaaacttga-tttaattcatatatgttcatatttattt 15006482  T

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Target: chr6; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 144 - 195
Target Start/End: Original strand, 3825530 - 3825581
Alignment:
Q  144 ttaattgcactttcccccctatcttttgctaattgtgcgattttgcaccccc 195  Q
    ||||||||||||| |||||||| |||||||||||||||||||||||||||||    
T  3825530 ttaattgcacttttccccctatattttgctaattgtgcgattttgcaccccc 3825581  T

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Target: chr6; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 141 - 195
Target Start/End: Original strand, 18241854 - 18241909
Alignment:
Q  141 ggcttaattgcacttt-cccccctatcttttgctaattgtgcgattttgcaccccc 195  Q
    |||||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  18241854 ggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgcaccccc 18241909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 139 - 231
Target Start/End: Complemental strand, 11656838 - 11656746
Alignment:
Q  139 ttggcttaattgcactttcccc-cctatcttttgctaattgtgcgattttgcacccccctcnnnnnnnnngagcgattttgcaccccatctttt 231  Q
    |||||||||||||||||| | | ||||||||||||||||||||||||||||||| ||||||         ||||||||||||||||||||||||    
T  11656838 ttggcttaattgcacttttctctcctatcttttgctaattgtgcgattttgcac-cccctctttatttttgagcgattttgcaccccatctttt 11656746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 141 - 195
Target Start/End: Complemental strand, 13579704 - 13579650
Alignment:
Q  141 ggcttaattgcactttcccccctatcttttgctaattgtgcgattttgcaccccc 195  Q
    |||||||||||||||| | ||||||| ||||||||||||||||||||||||||||    
T  13579704 ggcttaattgcacttttctccctatcgtttgctaattgtgcgattttgcaccccc 13579650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 160 - 244
Target Start/End: Complemental strand, 18242190 - 18242107
Alignment:
Q  160 ccctatcttttgctaattgtgcgattttgcacccccctcnnnnnnnnngagcgattttgcaccccatctttttgccccctctctg 244  Q
    ||||||||||||| |||||||||||||||||||||| ||         |||||||||||||||||||||||||||||||| ||||    
T  18242190 ccctatcttttgccaattgtgcgattttgcaccccc-tctttttttttgagcgattttgcaccccatctttttgccccctttctg 18242107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 141 - 198
Target Start/End: Complemental strand, 33655168 - 33655111
Alignment:
Q  141 ggcttaattgcactttcccccctatcttttgctaattgtgcgattttgcacccccctc 198  Q
    |||||||||||||||  |||| ||||||||||||||||||| ||||||||||||||||    
T  33655168 ggcttaattgcacttgtccccttatcttttgctaattgtgcaattttgcacccccctc 33655111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 138 - 194
Target Start/End: Original strand, 33828987 - 33829044
Alignment:
Q  138 tttggcttaattgcactttcc-cccctatcttttgctaattgtgcgattttgcacccc 194  Q
    ||||||||||||||||||| | |||||||||||||| |||||||||||||||||||||    
T  33828987 tttggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacccc 33829044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 244
Target Start/End: Complemental strand, 30388398 - 30388315
Alignment:
Q  158 ccccctatcttttgctaattgtgcgattttgcacccccctcnnnnnnnnngagcgattttgcaccccatctttttgccccctctctg 244  Q
    |||||||||||||||||||||||||||||||||||||| |          ||||||||||||||||||||||||| |||||| ||||    
T  30388398 ccccctatcttttgctaattgtgcgattttgcaccccctt---tttttttgagcgattttgcaccccatctttttaccccctttctg 30388315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 144 - 190
Target Start/End: Complemental strand, 31598778 - 31598732
Alignment:
Q  144 ttaattgcactttcccccctatcttttgctaattgtgcgattttgca 190  Q
    ||||||||||||| |||||||||||||| ||||||||||||||||||    
T  31598778 ttaattgcacttttccccctatcttttgttaattgtgcgattttgca 31598732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 141 - 194
Target Start/End: Complemental strand, 33829690 - 33829636
Alignment:
Q  141 ggcttaattgcactttcc-cccctatcttttgctaattgtgcgattttgcacccc 194  Q
    |||||||||||||||| | |||||||||||||| |||||||||||||||||||||    
T  33829690 ggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacccc 33829636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 141 - 189
Target Start/End: Complemental strand, 21032334 - 21032285
Alignment:
Q  141 ggcttaattgcacttt-cccccctatcttttgctaattgtgcgattttgc 189  Q
    |||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  21032334 ggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgc 21032285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 141 - 194
Target Start/End: Complemental strand, 29074425 - 29074372
Alignment:
Q  141 ggcttaattgcactttcccccctatcttttgctaattgtgcgattttgcacccc 194  Q
    ||||||||||| |||||||||||||  ||||| |||||||||||||||||||||    
T  29074425 ggcttaattgctctttcccccctatagtttgccaattgtgcgattttgcacccc 29074372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 141 - 194
Target Start/End: Complemental strand, 29079189 - 29079136
Alignment:
Q  141 ggcttaattgcactttcccccctatcttttgctaattgtgcgattttgcacccc 194  Q
    ||||||||||| |||||||||||||  ||||| |||||||||||||||||||||    
T  29079189 ggcttaattgctctttcccccctatagtttgccaattgtgcgattttgcacccc 29079136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 141 - 194
Target Start/End: Complemental strand, 29106998 - 29106945
Alignment:
Q  141 ggcttaattgcactttcccccctatcttttgctaattgtgcgattttgcacccc 194  Q
    ||||||||||| |||||||||||||  ||||| |||||||||||||||||||||    
T  29106998 ggcttaattgctctttcccccctatagtttgccaattgtgcgattttgcacccc 29106945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 141 - 193
Target Start/End: Complemental strand, 31598326 - 31598274
Alignment:
Q  141 ggcttaattgcactttcccccctatcttttgctaattgtgcgattttgcaccc 193  Q
    |||||||||| | ||| ||| ||||||||||||||||||||||||||||||||    
T  31598326 ggcttaattgtatttttccctctatcttttgctaattgtgcgattttgcaccc 31598274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 139 - 195
Target Start/End: Original strand, 33971992 - 33972048
Alignment:
Q  139 ttggcttaattgcactttcccccctatcttttgctaattgtgcgattttgcaccccc 195  Q
    |||||||||||||| |||  ||||||||||||| ||||||| |||||||||||||||    
T  33971992 ttggcttaattgcagtttttcccctatcttttgttaattgtacgattttgcaccccc 33972048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 194
Target Start/End: Complemental strand, 22684414 - 22684358
Alignment:
Q  138 tttggcttaattgcactttcccccctatcttttgctaattgtgcgattttgcacccc 194  Q
    ||||||||||||||||||| |||| |||  ||||| ||||||| |||||||||||||    
T  22684414 tttggcttaattgcacttttccccttatagtttgccaattgtgtgattttgcacccc 22684358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 194
Target Start/End: Original strand, 22754654 - 22754710
Alignment:
Q  138 tttggcttaattgcactttcccccctatcttttgctaattgtgcgattttgcacccc 194  Q
    ||||||||||||||||||| |||| |||  ||||| ||||||| |||||||||||||    
T  22754654 tttggcttaattgcacttttccccttatagtttgccaattgtgtgattttgcacccc 22754710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 157 - 239
Target Start/End: Original strand, 2762500 - 2762581
Alignment:
Q  157 cccccctatcttttgctaattgtgcgattttgcacccccctcnnnnnnnnngagcgattttgcaccccatctttttgccccct 239  Q
    |||||| || |||||||||||||||||||||||| |||||||         ||| ||||||||||| ||||||||||||||||    
T  2762500 ccccccaattttttgctaattgtgcgattttgca-ccccctctttttttttgagtgattttgcacctcatctttttgccccct 2762581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 146 - 195
Target Start/End: Original strand, 2762611 - 2762662
Alignment:
Q  146 aattgcactttc-ccccctatctttt-gctaattgtgcgattttgcaccccc 195  Q
    |||||||||||  ||||||||||||| |||||||||||||||||||||||||    
T  2762611 aattgcacttttgccccctatctttttgctaattgtgcgattttgcaccccc 2762662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 146 - 195
Target Start/End: Complemental strand, 10039893 - 10039842
Alignment:
Q  146 aattgcactttc-ccccctatctttt-gctaattgtgcgattttgcaccccc 195  Q
    |||||||||||  ||||||||||||| |||||||||||||||||||||||||    
T  10039893 aattgcacttttgccccctatctttttgctaattgtgcgattttgcaccccc 10039842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 140 - 194
Target Start/End: Complemental strand, 10087913 - 10087858
Alignment:
Q  140 tggcttaattgcacttt-cccccctatcttttgctaattgtgcgattttgcacccc 194  Q
    ||||||||||||||||| ||||||| |  ||||| |||||||||||||||||||||    
T  10087913 tggcttaattgcacttttcccccctttagtttgccaattgtgcgattttgcacccc 10087858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 140 - 194
Target Start/End: Complemental strand, 33974354 - 33974299
Alignment:
Q  140 tggcttaattgcacttt-cccccctatcttttgctaattgtgcgattttgcacccc 194  Q
    ||||||||||||| ||| |||||||||  ||||| |||||||||||||||||||||    
T  33974354 tggcttaattgcatttttcccccctatagtttgccaattgtgcgattttgcacccc 33974299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 194
Target Start/End: Complemental strand, 7654602 - 7654548
Alignment:
Q  141 ggcttaattgcacttt-cccccctatcttttgctaattgtgcgattttgcacccc 194  Q
    |||||||||||||||| |||||||||  ||||  |||||||||||||||||||||    
T  7654602 ggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcacccc 7654548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 195
Target Start/End: Original strand, 12714436 - 12714486
Alignment:
Q  146 aattgcactttc-ccccctatcttttgctaattgtgcgattttgcaccccc 195  Q
    |||||||||||  |||||||||||||| |||||||||||||||||| ||||    
T  12714436 aattgcacttttgccccctatcttttgttaattgtgcgattttgcagcccc 12714486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 195
Target Start/End: Original strand, 23250592 - 23250646
Alignment:
Q  141 ggcttaattgcactttcccccctatcttttgctaattgtgcgattttgcaccccc 195  Q
    ||||||||||||||||  |||||||||||||  ||||||| ||| ||||||||||    
T  23250592 ggcttaattgcactttttcccctatcttttgtcaattgtgagatcttgcaccccc 23250646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 195
Target Start/End: Complemental strand, 23250945 - 23250891
Alignment:
Q  141 ggcttaattgcactttcccccctatcttttgctaattgtgcgattttgcaccccc 195  Q
    ||||| ||||||||||   |||||||||||||||||||||||| |||| ||||||    
T  23250945 ggcttgattgcactttttgccctatcttttgctaattgtgcgaatttgtaccccc 23250891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 193
Target Start/End: Original strand, 11656535 - 11656567
Alignment:
Q  161 cctatcttttgctaattgtgcgattttgcaccc 193  Q
    ||||||||||||||||| |||||||||||||||    
T  11656535 cctatcttttgctaattatgcgattttgcaccc 11656567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 23220172 - 23220116
Alignment:
Q  2 gataattgttgatgataagtgtgcttgatgactacttgatcgtgatatttgggattg 58  Q
    ||||||||||||||||||||||| ||||||| ||| |  | ||||||||||| ||||    
T  23220172 gataattgttgatgataagtgtgtttgatgaatacatacttgtgatatttggaattg 23220116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0253 (Bit Score: 80; Significance: 1e-37; HSPs: 2)
Name: scaffold0253
Description:

Target: scaffold0253; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 3 - 102
Target Start/End: Complemental strand, 9822 - 9723
Alignment:
Q  3 ataattgttgatgataagtgtgcttgatgactacttgatcgtgatatttgggattgttatgtgaatgtgtatattgaattaactatttatgtgaagtact 102  Q
    |||||||||||||||||||||||||| ||| | ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||    
T  9822 ataattgttgatgataagtgtgcttggtgagtgcttgatcgtgatatttgggattgttatgtgaatgtgtatattgaattaactgtttatgttaagtact 9723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0253; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 3 - 102
Target Start/End: Complemental strand, 19247 - 19148
Alignment:
Q  3 ataattgttgatgataagtgtgcttgatgactacttgatcgtgatatttgggattgttatgtgaatgtgtatattgaattaactatttatgtgaagtact 102  Q
    |||||||||||||||||||||||||| ||| | ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||    
T  19247 ataattgttgatgataagtgtgcttggtgagtgcttgatcgtgatatttgggattgttatgtgaatgtgtatattgaattaactgtttatgttaagtact 19148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 76; Significance: 3e-35; HSPs: 68)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 14939186 - 14939048
Alignment:
Q  1 tgataattgttgatgataagtgtgcttgatgactacttgatcgtgatatttgggattgttatgtgaatgtgtatattgaattaactatttatgtgaagta 100  Q
    ||||| |||||||||||||||||||||| ||| |||||| |||||||||||||||||||||||| |||||  ||||||||||||||  ||||||||||||    
T  14939186 tgatatttgttgatgataagtgtgcttggtgagtacttggtcgtgatatttgggattgttatgtaaatgtacatattgaattaact-gttatgtgaagta 14939088  T
Q  101 ctcgaaaaagattttaattcatatatgctcaaatttattt 140  Q
     | | ||  ||||||||| |||||||||||||||||||||    
T  14939087 attggaattgattttaatacatatatgctcaaatttattt 14939048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 15366779 - 15366641
Alignment:
Q  1 tgataattgttgatgataagtgtgcttgatgactacttgatcgtgatatttgggattgttatgtgaatgtgtatattgaattaactatttatgtgaagta 100  Q
    ||||| |||||||||||||||||||||| ||| |||||| |||||||||||||||||||||||| |||||  ||||||||||||||  ||||||||||||    
T  15366779 tgatatttgttgatgataagtgtgcttggtgagtacttggtcgtgatatttgggattgttatgtaaatgtacatattgaattaact-gttatgtgaagta 15366681  T
Q  101 ctcgaaaaagattttaattcatatatgctcaaatttattt 140  Q
     | | ||  ||||||||| |||||||||||||||||||||    
T  15366680 attggaattgattttaatacatatatgctcaaatttattt 15366641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 20587338 - 20587475
Alignment:
Q  1 tgataattgttgatgataagtgtgcttgatgactacttgatcgtgatatttgggattgttatgtgaatgtgtatattgaattaactatttatgtgaagta 100  Q
    |||||||||||||||||||||||||||| | | ||||||||||||||| ||||||| |||||||||||||||| ||||||||||||  |||| |||||||    
T  20587338 tgataattgttgatgataagtgtgcttggttagtacttgatcgtgata-ttgggatggttatgtgaatgtgtacattgaattaact-gttatatgaagta 20587435  T
Q  101 ctcgaaaaagattttaattcatatatgctcaaatttattt 140  Q
    |||  ||  |||||||||||||||||||| ||||||||||    
T  20587436 ctcagaattgattttaattcatatatgcttaaatttattt 20587475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 4437353 - 4437214
Alignment:
Q  1 tgataattgttgatgataagtgtgcttgatgactacttgatcgtgatatttgggattgttatgtgaatgtgtatattgaattaactatttatgtgaagta 100  Q
    |||| ||||||||||||||||||| ||||||| ||||| || |||||  |||| ||||||||||||||||||||||| |||||||| ||||||| |||||    
T  4437353 tgatgattgttgatgataagtgtgtttgatgaatacttaattgtgatggttggaattgttatgtgaatgtgtatattaaattaactgtttatgttaagta 4437254  T
Q  101 ctcgaaaaagattttaattcatatatgctcaaatttattt 140  Q
    |||| ||    |||||||||||||||||||| ||| ||||    
T  4437253 ctcggaacttgttttaattcatatatgctcagattcattt 4437214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 4444754 - 4444615
Alignment:
Q  1 tgataattgttgatgataagtgtgcttgatgactacttgatcgtgatatttgggattgttatgtgaatgtgtatattgaattaactatttatgtgaagta 100  Q
    |||| ||||||||||||||||||| ||||||| ||||| || |||||  |||| ||||||||||||||||||||||| |||||||| ||||||| |||||    
T  4444754 tgatgattgttgatgataagtgtgtttgatgaatacttaattgtgatggttggaattgttatgtgaatgtgtatattaaattaactgtttatgttaagta 4444655  T
Q  101 ctcgaaaaagattttaattcatatatgctcaaatttattt 140  Q
    |||| ||    |||||||||||||||||||| ||| ||||    
T  4444654 ctcggaacttgttttaattcatatatgctcagattcattt 4444615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 8 - 140
Target Start/End: Complemental strand, 31499711 - 31499579
Alignment:
Q  8 tgttgatgataagtgtgcttgatgactacttgatcgtgatatttgggattgttatgtgaatgtgtatattgaattaactatttatgtgaagtac-tcgaa 106  Q
    |||||||||||||| |||||| ||| |||||||||||||||||||  || ||||||||||||| ||||||||||||||| ||||||| |||||| | |||    
T  31499711 tgttgatgataagtatgcttggtgagtacttgatcgtgatatttgaaatggttatgtgaatgtttatattgaattaactgtttatgttaagtacttagaa 31499612  T
Q  107 aaagattttaattcatatatgctcaaatttattt 140  Q
       || ||||||||||||||||||||||||||||    
T  31499611 tttga-tttaattcatatatgctcaaatttattt 31499579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 33558201 - 33558062
Alignment:
Q  1 tgataattgttgatgataagtgtgcttgatgactacttgatcgtgatatttgggattgttatgtgaatgtgtatattgaattaactatttatgtgaagta 100  Q
    |||| ||||||||||||||||||||||||||| ||||| ||||||||| |||||| | | || ||||||||||||||||||||||| ||||||| |||||    
T  33558201 tgatgattgttgatgataagtgtgcttgatgagtacttaatcgtgataattgggactatgatatgaatgtgtatattgaattaactgtttatgttaagta 33558102  T
Q  101 c-tcgaaaaagattttaattcatatatgctcaaatttattt 140  Q
    | | |||   || ||||||||||||||| ||||||||||||    
T  33558101 cttagaacttga-tttaattcatatatgttcaaatttattt 33558062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 7 - 140
Target Start/End: Original strand, 16921650 - 16921783
Alignment:
Q  7 ttgttgatgataagtgtgcttgatgactacttgatcgtgatatttgggattgttatgtgaatgtgtatattgaattaactatttatgtgaagtactcgaa 106  Q
    |||||||||||||||||||||| ||| | |||||||||  ||||| ||| |||||||| |||||  |||||||||||| | ||||||| |||| || | |    
T  16921650 ttgttgatgataagtgtgcttggtgaatgcttgatcgtattattttggaatgttatgtaaatgtacatattgaattaattgtttatgttaagtgcttgga 16921749  T
Q  107 aaagattttaattcatatatgctcaaatttattt 140  Q
    |  |||||||||||||||| |||||||| |||||    
T  16921750 attgattttaattcatataagctcaaatctattt 16921783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 141 - 239
Target Start/End: Complemental strand, 9412379 - 9412281
Alignment:
Q  141 ggcttaattgcacttt-cccccctatcttttgctaattgtgcgattttgcacccccctcnnnnnnnnngagcgattttgcaccccatctttttgccccct 239  Q
    |||||||||||||||| |||||||||||||||| |||||||||||||||||| ||||||         ||||||||||||||||||||||||||||||||    
T  9412379 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcac-cccctctttttttttgagcgattttgcaccccatctttttgccccct 9412281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 139 - 244
Target Start/End: Complemental strand, 3687712 - 3687608
Alignment:
Q  139 ttggcttaattgcacttt-cccccctatcttttgctaattgtgcgattttgcacccccctcnnnnnnnnngagcgattttgcaccccatctttttgcccc 237  Q
    |||||||||||||||||| |||||||||||||||| |||||||||||||||||| ||||||         ||||||||||||||||||||||||||||||    
T  3687712 ttggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcac-cccctc-ttttttttgagcgattttgcaccccatctttttgcccc 3687615  T
Q  238 ctctctg 244  Q
    || ||||    
T  3687614 ctttctg 3687608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 138 - 195
Target Start/End: Complemental strand, 13772958 - 13772900
Alignment:
Q  138 tttggcttaattgcacttt-cccccctatcttttgctaattgtgcgattttgcaccccc 195  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||    
T  13772958 tttggcttaattgcacttttcccccctatcatttgctaattgtgcgattttgcaccccc 13772900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 138 - 188
Target Start/End: Original strand, 27096044 - 27096094
Alignment:
Q  138 tttggcttaattgcactttcccccctatcttttgctaattgtgcgattttg 188  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  27096044 tttggcttaattgcactttcccccctatattttgctaattgtgcgattttg 27096094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 138 - 188
Target Start/End: Complemental strand, 27182259 - 27182209
Alignment:
Q  138 tttggcttaattgcactttcccccctatcttttgctaattgtgcgattttg 188  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  27182259 tttggcttaattgcactttcccccctatattttgctaattgtgcgattttg 27182209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 144 - 193
Target Start/End: Complemental strand, 6908534 - 6908485
Alignment:
Q  144 ttaattgcactttcccccctatcttttgctaattgtgcgattttgcaccc 193  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  6908534 ttaattgcactttcccccctattttttgctaattgtgcgattttgcaccc 6908485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 138 - 195
Target Start/End: Original strand, 3687350 - 3687409
Alignment:
Q  138 tttggcttaattgcacttt--cccccctatcttttgctaattgtgcgattttgcaccccc 195  Q
    |||||||||||||||||||  ||||||||||||||| |||||||||||||||||||||||    
T  3687350 tttggcttaattgcacttttccccccctatcttttgttaattgtgcgattttgcaccccc 3687409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 138 - 193
Target Start/End: Original strand, 23686418 - 23686473
Alignment:
Q  138 tttggcttaattgcactttcccccctatcttttgctaattgtgcgattttgcaccc 193  Q
    ||||||||||||||||||| |||||||||||||||||||||| | |||||||||||    
T  23686418 tttggcttaattgcacttttccccctatcttttgctaattgtacaattttgcaccc 23686473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 138 - 193
Target Start/End: Original strand, 35079957 - 35080012
Alignment:
Q  138 tttggcttaattgcactttcccccctatcttttgctaattgtgcgattttgcaccc 193  Q
    ||||||||||||||||||| ||||||||||||||||||||||| | ||||||||||    
T  35079957 tttggcttaattgcacttttccccctatcttttgctaattgtggggttttgcaccc 35080012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 142 - 195
Target Start/End: Complemental strand, 8953941 - 8953888
Alignment:
Q  142 gcttaattgcactttcccccctatcttttgctaattgtgcgattttgcaccccc 195  Q
    ||||||||||||||| |||||||||||||| ||||||||| |||||||||||||    
T  8953941 gcttaattgcacttttccccctatcttttgttaattgtgcaattttgcaccccc 8953888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 138 - 194
Target Start/End: Original strand, 44599486 - 44599543
Alignment:
Q  138 tttggcttaattgcactttcc-cccctatcttttgctaattgtgcgattttgcacccc 194  Q
    ||||||||||||||||||| | |||||||||||||| |||||||||||||||||||||    
T  44599486 tttggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacccc 44599543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 141 - 193
Target Start/End: Original strand, 6908213 - 6908265
Alignment:
Q  141 ggcttaattgcactttcccccctatcttttgctaattgtgcgattttgcaccc 193  Q
    |||||||||||||||| |||||||||| ||| |||||||||||||||||||||    
T  6908213 ggcttaattgcacttttccccctatctattgttaattgtgcgattttgcaccc 6908265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 16382037 - 16381985
Alignment:
Q  1 tgataattgttgatgataagtgtgcttgatgactacttgatcgtgatatttgg 53  Q
    |||||||||||||||||||||||| ||| ||| ||||||||||||||||||||    
T  16382037 tgataattgttgatgataagtgtgtttggtgagtacttgatcgtgatatttgg 16381985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 140 - 194
Target Start/End: Complemental strand, 5349785 - 5349733
Alignment:
Q  140 tggcttaattgcactttcccccctatcttttgctaattgtgcgattttgcacccc 194  Q
    |||||||||||||||||||||  ||||||||| ||||||||||||||||||||||    
T  5349785 tggcttaattgcactttcccc--tatcttttgttaattgtgcgattttgcacccc 5349733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 141 - 195
Target Start/End: Original strand, 9412023 - 9412078
Alignment:
Q  141 ggcttaattgcactttcccccct-atcttttgctaattgtgcgattttgcaccccc 195  Q
    |||||||||||||||| |||||| |||||||| |||||||||||||||||||||||    
T  9412023 ggcttaattgcacttttcccccttatcttttgttaattgtgcgattttgcaccccc 9412078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 141 - 194
Target Start/End: Original strand, 13772641 - 13772695
Alignment:
Q  141 ggcttaattgcactttccc-ccctatcttttgctaattgtgcgattttgcacccc 194  Q
    |||||||||||||||| || ||||||||||||||||||||| |||||||||||||    
T  13772641 ggcttaattgcacttttcctccctatcttttgctaattgtgtgattttgcacccc 13772695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 141 - 194
Target Start/End: Complemental strand, 44600189 - 44600135
Alignment:
Q  141 ggcttaattgcactttcc-cccctatcttttgctaattgtgcgattttgcacccc 194  Q
    |||||||||||||||| | |||||||||||||| |||||||||||||||||||||    
T  44600189 ggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacccc 44600135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 131 - 191
Target Start/End: Original strand, 5735242 - 5735303
Alignment:
Q  131 aaatttatttggcttaattgcactttcc-cccctatcttttgctaattgtgcgattttgcac 191  Q
    ||||||| || ||||||||||||||| | ||||||||||| |||||||||||||||||||||    
T  5735242 aaatttaattagcttaattgcacttttctcccctatctttggctaattgtgcgattttgcac 5735303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 138 - 194
Target Start/End: Original strand, 37888830 - 37888887
Alignment:
Q  138 tttggcttaattgcacttt-cccccctatcttttgctaattgtgcgattttgcacccc 194  Q
    ||||||||||||||||||| |||||||||  ||||| |||||||||||||||||||||    
T  37888830 tttggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 37888887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 133 - 192
Target Start/End: Original strand, 18925054 - 18925114
Alignment:
Q  133 atttatttggcttaattgcactttccc-ccctatcttttgctaattgtgcgattttgcacc 192  Q
    |||| ||||||||||||||||||| |  |||||||||||||||||||||| ||||||||||    
T  18925054 atttttttggcttaattgcacttttcttccctatcttttgctaattgtgcaattttgcacc 18925114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 141 - 188
Target Start/End: Complemental strand, 23686771 - 23686723
Alignment:
Q  141 ggcttaattgcactttc-ccccctatcttttgctaattgtgcgattttg 188  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||||    
T  23686771 ggcttaattgcactttttccccctatcttttgctaattgtgcgattttg 23686723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 162 - 198
Target Start/End: Complemental strand, 34236010 - 34235974
Alignment:
Q  162 ctatcttttgctaattgtgcgattttgcacccccctc 198  Q
    |||||||||||||||||||||||||||||||||||||    
T  34236010 ctatcttttgctaattgtgcgattttgcacccccctc 34235974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 139 - 194
Target Start/End: Original strand, 3204667 - 3204721
Alignment:
Q  139 ttggcttaattgcactttcccccctatcttttgctaattgtgcgattttgcacccc 194  Q
    ||||||||||||||||||||||| |||  ||||| |||||||||||||||||||||    
T  3204667 ttggcttaattgcactttccccc-tatagtttgccaattgtgcgattttgcacccc 3204721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 140 - 194
Target Start/End: Complemental strand, 9035348 - 9035293
Alignment:
Q  140 tggcttaattgcacttt-cccccctatcttttgctaattgtgcgattttgcacccc 194  Q
    ||||||||||||||||| |||||||||  ||||| |||||||||||||||||||||    
T  9035348 tggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 9035293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 141 - 194
Target Start/End: Original strand, 10533034 - 10533088
Alignment:
Q  141 ggcttaattgcacttt-cccccctatcttttgctaattgtgcgattttgcacccc 194  Q
    |||||||||||||||| |||||||||  ||||| |||||||||||||||||||||    
T  10533034 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 10533088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 141 - 194
Target Start/End: Original strand, 13863313 - 13863367
Alignment:
Q  141 ggcttaattgcactttcc-cccctatcttttgctaattgtgcgattttgcacccc 194  Q
    |||||||||||| ||| | |||||||||||||| |||||||||||||||||||||    
T  13863313 ggcttaattgcatttttcacccctatcttttgccaattgtgcgattttgcacccc 13863367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 141 - 194
Target Start/End: Complemental strand, 37889313 - 37889259
Alignment:
Q  141 ggcttaattgcacttt-cccccctatcttttgctaattgtgcgattttgcacccc 194  Q
    |||||||||||||||| |||||||||  ||||| |||||||||||||||||||||    
T  37889313 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 37889259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 141 - 194
Target Start/End: Complemental strand, 37972450 - 37972396
Alignment:
Q  141 ggcttaattgcacttt-cccccctatcttttgctaattgtgcgattttgcacccc 194  Q
    |||||||||||||||| |||||||||  ||||| |||||||||||||||||||||    
T  37972450 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 37972396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 140 - 194
Target Start/End: Original strand, 48359319 - 48359373
Alignment:
Q  140 tggcttaattgcactttcccccctatcttttgctaattgtgcgattttgcacccc 194  Q
    ||||||||||||||||| ||||||||  ||||  |||||||||||||||||||||    
T  48359319 tggcttaattgcacttttccccctatagtttgtcaattgtgcgattttgcacccc 48359373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 141 - 194
Target Start/End: Complemental strand, 13744286 - 13744233
Alignment:
Q  141 ggcttaattgcactttcccccctatcttttgctaattgtgcgattttgcacccc 194  Q
    |||||||||||||||| ||||||||  ||||  |||||||||||||||||||||    
T  13744286 ggcttaattgcacttttccccctatagtttgtcaattgtgcgattttgcacccc 13744233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 194
Target Start/End: Complemental strand, 18925373 - 18925322
Alignment:
Q  142 gcttaattgcactttcccccctatcttttgctaattgtgcgattttgcacccc 194  Q
    ||||||||||||||| || | ||| ||||||||||||||||||||||||||||    
T  18925373 gcttaattgcacttttcctc-tatattttgctaattgtgcgattttgcacccc 18925322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 195
Target Start/End: Original strand, 33628397 - 33628449
Alignment:
Q  143 cttaattgcactttcccccctatcttttgctaattgtgcgattttgcaccccc 195  Q
    |||||||||||||| | || ||||||||||||||||||| |||||||| ||||    
T  33628397 cttaattgcacttttctccttatcttttgctaattgtgcaattttgcatcccc 33628449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 141 - 195
Target Start/End: Original strand, 9034867 - 9034922
Alignment:
Q  141 ggcttaattgcacttt-cccccctatcttttgctaattgtgcgattttgcaccccc 195  Q
    |||||||||||||||| |||||||||  ||||| |||||||||||| |||||||||    
T  9034867 ggcttaattgcacttttcccccctataatttgccaattgtgcgattctgcaccccc 9034922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 141 - 192
Target Start/End: Complemental strand, 18864455 - 18864404
Alignment:
Q  141 ggcttaattgcactttcccccctatcttttgctaattgtgcgattttgcacc 192  Q
    |||||||||| ||||| ||||||||  ||||| |||||||||||||||||||    
T  18864455 ggcttaattgtacttttccccctatagtttgccaattgtgcgattttgcacc 18864404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 144 - 194
Target Start/End: Original strand, 20418891 - 20418942
Alignment:
Q  144 ttaattgcacttt-cccccctatcttttgctaattgtgcgattttgcacccc 194  Q
    ||||||||||||| |||||||||  ||||| |||||||||||||||||||||    
T  20418891 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 20418942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 144 - 195
Target Start/End: Complemental strand, 27096392 - 27096341
Alignment:
Q  144 ttaattgcactttcccccctatcttttgctaattgtgcgattttgcaccccc 195  Q
    ||||||||||||| ||||||||||||||  ||||||| ||||||||| ||||    
T  27096392 ttaattgcacttttccccctatcttttgtcaattgtgtgattttgcatcccc 27096341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 144 - 195
Target Start/End: Original strand, 27181911 - 27181962
Alignment:
Q  144 ttaattgcactttcccccctatcttttgctaattgtgcgattttgcaccccc 195  Q
    ||||||||||||| ||||||||||||||  ||||||| ||||||||| ||||    
T  27181911 ttaattgcacttttccccctatcttttgtcaattgtgtgattttgcatcccc 27181962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 144 - 195
Target Start/End: Complemental strand, 42419079 - 42419028
Alignment:
Q  144 ttaattgcactttcccccctatcttttgctaattgtgcgattttgcaccccc 195  Q
    ||||||||||||| ||||||||  ||||| ||||||||| ||||||||||||    
T  42419079 ttaattgcacttttccccctatagtttgccaattgtgcgtttttgcaccccc 42419028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 194
Target Start/End: Complemental strand, 3205147 - 3205093
Alignment:
Q  141 ggcttaattgcacttt-cccccctatcttttgctaattgtgcgattttgcacccc 194  Q
    |||||||||||||||| |||||||||  ||||  |||||||||||||||||||||    
T  3205147 ggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcacccc 3205093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 194
Target Start/End: Complemental strand, 8643820 - 8643766
Alignment:
Q  141 ggcttaattgcactttccc-ccctatcttttgctaattgtgcgattttgcacccc 194  Q
    |||||||||||||||| |  ||||||||||| | |||||||||||||||||||||    
T  8643820 ggcttaattgcacttttcatccctatcttttaccaattgtgcgattttgcacccc 8643766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 186
Target Start/End: Complemental strand, 13864010 - 13863964
Alignment:
Q  141 ggcttaattgcactttcc-cccctatcttttgctaattgtgcgattt 186  Q
    |||||||||||||||| | |||||||||||||| |||||||||||||    
T  13864010 ggcttaattgcacttttcacccctatcttttgccaattgtgcgattt 13863964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 194
Target Start/End: Original strand, 17156967 - 17157021
Alignment:
Q  141 ggcttaattgcacttt-cccccctatcttttgctaattgtgcgattttgcacccc 194  Q
    |||||||||||||||| |||||||||  ||||  |||||||||||||||||||||    
T  17156967 ggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcacccc 17157021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 194
Target Start/End: Complemental strand, 20419378 - 20419324
Alignment:
Q  141 ggcttaattgcacttt-cccccctatcttttgctaattgtgcgattttgcacccc 194  Q
    |||||||||||||||| |||||||||  ||||  |||||||||||||||||||||    
T  20419378 ggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcacccc 20419324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 194
Target Start/End: Original strand, 22740156 - 22740210
Alignment:
Q  141 ggcttaattgcacttt-cccccctatcttttgctaattgtgcgattttgcacccc 194  Q
    |||||||||||||||| |||||||||  ||||  |||||||||||||||||||||    
T  22740156 ggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcacccc 22740210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 194
Target Start/End: Complemental strand, 22740641 - 22740591
Alignment:
Q  144 ttaattgcactttcccccctatcttttgctaattgtgcgattttgcacccc 194  Q
    ||||||||||||| ||||||||  ||||  |||||||||||||||||||||    
T  22740641 ttaattgcacttttccccctatagtttgtcaattgtgcgattttgcacccc 22740591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 195
Target Start/End: Original strand, 29291803 - 29291861
Alignment:
Q  138 tttggcttaattgcactttccc-ccctatcttttgctaattgtgcgattttgcaccccc 195  Q
    |||| ||||||||||||||  | |||||||||||| ||||| |||||||||||||||||    
T  29291803 tttgacttaattgcactttttctccctatcttttgataattatgcgattttgcaccccc 29291861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 195
Target Start/End: Complemental strand, 29292098 - 29292040
Alignment:
Q  138 tttggcttaattgcactttccccc-ctatcttttgctaattgtgcgattttgcaccccc 195  Q
    |||||||||||||||||||   || ||| |||||||||||||||||||||| |||||||    
T  29292098 tttggcttaattgcacttttttcctctaacttttgctaattgtgcgattttccaccccc 29292040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 190
Target Start/End: Original strand, 29292922 - 29292972
Alignment:
Q  141 ggcttaattgcacttt-cccccctatcttttgctaattgtgcgattttgca 190  Q
    |||||||||||||||| |||||||||  ||||| |||||||||||||||||    
T  29292922 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgca 29292972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 191
Target Start/End: Complemental strand, 29293403 - 29293349
Alignment:
Q  138 tttggcttaattgcacttt-cccccctatcttttgctaattgtgcgattttgcac 191  Q
    ||||||||||||||| ||| |||||||||  ||||| ||||||||||||||||||    
T  29293403 tttggcttaattgcatttttcccccctatagtttgccaattgtgcgattttgcac 29293349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 194
Target Start/End: Complemental strand, 33628714 - 33628660
Alignment:
Q  141 ggcttaattgcactttccccc-ctatcttttgctaattgtgcgattttgcacccc 194  Q
    |||| |||||||||||  ||| ||||||||| |||||||||||||||||||||||    
T  33628714 ggctaaattgcactttttccctctatcttttactaattgtgcgattttgcacccc 33628660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 142 - 198
Target Start/End: Original strand, 39983700 - 39983757
Alignment:
Q  142 gcttaattgcactttcccccct-atcttttgctaattgtgcgattttgcacccccctc 198  Q
    ||||||||||||||| |||||| |||||||  ||||| |||||||| |||||||||||    
T  39983700 gcttaattgcacttttcccccttatcttttattaattatgcgatttcgcacccccctc 39983757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 193
Target Start/End: Complemental strand, 6908427 - 6908391
Alignment:
Q  158 ccccctatctttt-gctaattgtgcgattttgcaccc 193  Q
    ||||||||||||| |||||||||||||||||||||||    
T  6908427 ccccctatctttttgctaattgtgcgattttgcaccc 6908391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 102
Target Start/End: Complemental strand, 9609707 - 9609613
Alignment:
Q  7 ttgttgatgataagtgtgcttgatgactacttgatcgtgatatt-tgggattgttatgtgaatgtgtatattgaattaactatttatgtgaagtact 102  Q
    |||||||||| ||||||||| | ||| |||||||||||  |||| |||||| ||||||| |||||  |||||||||||| | ||||||| |||||||    
T  9609707 ttgttgatga-aagtgtgctaggtgaatacttgatcgtattattatgggat-gttatgtaaatgtacatattgaattaattgtttatgttaagtact 9609613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 102
Target Start/End: Complemental strand, 9837279 - 9837185
Alignment:
Q  7 ttgttgatgataagtgtgcttgatgactacttgatcgtgatatt-tgggattgttatgtgaatgtgtatattgaattaactatttatgtgaagtact 102  Q
    |||||||||| ||||||||| | ||| |||||||||||  |||| |||||| ||||||| |||||  |||||||||||| | ||||||| |||||||    
T  9837279 ttgttgatga-aagtgtgctaggtgaatacttgatcgtattattatgggat-gttatgtaaatgtacatattgaattaattgtttatgttaagtact 9837185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 194
Target Start/End: Original strand, 13741555 - 13741611
Alignment:
Q  139 ttggcttaattgcacttt-cccccctatcttttgctaattgtgcgattttgcacccc 194  Q
    |||||||||||||| ||| |||||||||  ||| | |||||||||||||||||||||    
T  13741555 ttggcttaattgcatttttcccccctatagtttaccaattgtgcgattttgcacccc 13741611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 73 - 140
Target Start/End: Original strand, 34242908 - 34242976
Alignment:
Q  73 atattgaattaactatttatgtgaagtactcgaaaaagatttt-aattcatatatgctcaaatttattt 140  Q
    ||||||||| |||||||||||| |||| || | ||  |||||| ||||||||||||||||||| |||||    
T  34242908 atattgaatcaactatttatgttaagtgcttggaattgatttttaattcatatatgctcaaatctattt 34242976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 194
Target Start/End: Complemental strand, 35080259 - 35080223
Alignment:
Q  158 ccccctatcttttgctaattgtgcgattttgcacccc 194  Q
    |||| ||||||||| ||||||||||||||||||||||    
T  35080259 ccccttatcttttgttaattgtgcgattttgcacccc 35080223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 192
Target Start/End: Original strand, 38191387 - 38191435
Alignment:
Q  145 taattgcactttcccccctatctttt-gctaattgtgcgattttgcacc 192  Q
    ||||||||||||  |||||||||||| || |||||||||||||||||||    
T  38191387 taattgcactttttcccctatctttttgccaattgtgcgattttgcacc 38191435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 188
Target Start/End: Original strand, 42418591 - 42418639
Alignment:
Q  141 ggcttaattgcacttt-cccccctatcttttgctaattgtgcgattttg 188  Q
    ||||||||| |||||| |||||||||  |||||||||||||||||||||    
T  42418591 ggcttaatttcacttttcccccctatagtttgctaattgtgcgattttg 42418639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 102
Target Start/End: Complemental strand, 48346025 - 48345957
Alignment:
Q  34 tacttgatcgtgatatttgggattgttatgtgaatgtgtatattgaattaactatttatgtgaagtact 102  Q
    |||||| ||||  ||||| ||| |||||||| |||||  |||||||||||||| ||||||| |||||||    
T  48346025 tacttggtcgtattattttggaatgttatgtaaatgtacatattgaattaactgtttatgttaagtact 48345957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327 (Bit Score: 74; Significance: 5e-34; HSPs: 1)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 4 - 140
Target Start/End: Original strand, 6586 - 6722
Alignment:
Q  4 taattgttgatgataagtgtgcttgatgactacttgatcgtgatatttgggattgttatgtgaatgtgtatattgaattaactatttatgtgaagtactc 103  Q
    ||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||  ||||||| |||||||||||||||| ||||||| |||| |||    
T  6586 taattgttgatgataagtgtgcttggtgagtacttgatcgtgatatttggaattgtttggtgaatgagtatattgaattaactttttatgttaagtgctc 6685  T
Q  104 -gaaaaagattttaattcatatatgctcaaatttattt 140  Q
     |||   || ||||||||||||||||||||||||||||    
T  6686 agaatttga-tttaattcatatatgctcaaatttattt 6722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0387 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0387
Description:

Target: scaffold0387; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 2730 - 2863
Alignment:
Q  1 tgataattgttgatgataagtgtgcttgatgactacttgatcgtgatatttgggattgttatgtgaatgtgtatattgaattaactatttatgtgaagta 100  Q
    |||||| ||||||||||||||||||||| ||| ||| ||||||||||| |||| || ||||||||||||||||||||||||||||| ||||||| |||||    
T  2730 tgataaatgttgatgataagtgtgcttggtgagtacatgatcgtgataattggaatggttatgtgaatgtgtatattgaattaactgtttatgttaagta 2829  T
Q  101 ctcgaaaaagattttaattcatatatgctcaaat 134  Q
    |||  ||   | |||||||||||| |||||||||    
T  2830 ctcagaatctaatttaattcatatttgctcaaat 2863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 1055 - 918
Alignment:
Q  1 tgataattgttgatgataagtgtgcttgatgactacttgatcgtgatatttgggattgttatgtgaatgtgtatattgaattaactatttatgtgaagta 100  Q
    |||||||||||||||||||||||| ||| ||| |  |||||||||||||||||||||||||||||||||||||||||||||||| | |||||||  ||||    
T  1055 tgataattgttgatgataagtgtggttggtgagtggttgatcgtgatatttgggattgttatgtgaatgtgtatattgaattaattgtttatgttgagta 956  T
Q  101 ctcgaaaaagattttaattcatatatgctcaaatttat 138  Q
     | | ||     ||||||||||||||||||||||||||    
T  955 gttggaatttgatttaattcatatatgctcaaatttat 918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 4 - 140
Target Start/End: Complemental strand, 21694 - 21558
Alignment:
Q  4 taattgttgatgataagtgtgcttgatgactacttgatcgtgatatttgggattgttatgtgaatgtgtatattgaattaactatttatgtgaagtactc 103  Q
    ||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||  ||||||| |||||||||| |||||  |||||| ||||||||    
T  21694 taattgttgatgataagtgtgcttggtgagtacttgatcgtgatatttggaattgtttggtgaatgagtatattgaaataactggttatgttaagtactc 21595  T
Q  104 -gaaaaagattttaattcatatatgctcaaatttattt 140  Q
     |||   || ||||||||||||||||||||||||||||    
T  21594 agaatttga-tttaattcatatatgctcaaatttattt 21558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 64; Significance: 5e-28; HSPs: 54)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 24869019 - 24868880
Alignment:
Q  1 tgataattgttgatgataagtgtgcttgatgactacttgatcgtgatatttgggattgttatgtgaatgtgtatattgaattaactatttatgtgaagta 100  Q
    ||||| |||||||||||||||||||||| ||| |||||| |||||||||||| |||||||||||||||| ||||||| |||||| | | |||||||||||    
T  24869019 tgatagttgttgatgataagtgtgcttggtgagtacttgttcgtgatatttgagattgttatgtgaatgcgtatattaaattaattgtctatgtgaagta 24868920  T
Q  101 ctcgaaaaagattttaattcatatatgctcaaatttattt 140  Q
    |||  ||  || | || |||||||||||| |||| |||||    
T  24868919 ctctgaattgactatatttcatatatgctaaaatctattt 24868880  T

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Target: chr2; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 141 - 244
Target Start/End: Original strand, 30190923 - 30191026
Alignment:
Q  141 ggcttaattgcacttt-cccccctatcttttgctaattgtgcgattttgcacccccctcnnnnnnnnngagcgattttgcaccccatctttttgccccct 239  Q
    |||||||||||||||| |||||||||||||||| ||||||||||||||||| |||||||         ||||||||||||||||||||||||||||||||    
T  30190923 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgca-ccccctctttttttttgagcgattttgcaccccatctttttgccccct 30191021  T
Q  240 ctctg 244  Q
     ||||    
T  30191022 ttctg 30191026  T

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Target: chr2; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 141 - 239
Target Start/End: Original strand, 24832331 - 24832429
Alignment:
Q  141 ggcttaattgcacttt-cccccctatcttttgctaattgtgcgattttgcacccccctcnnnnnnnnngagcgattttgcaccccatctttttgccccct 239  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||| |||| ||         ||||||||||||||||||||||||||||||||    
T  24832331 ggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgca-ccccatctttttttttgagcgattttgcaccccatctttttgccccct 24832429  T

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Target: chr2; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 138 - 195
Target Start/End: Complemental strand, 11883983 - 11883925
Alignment:
Q  138 tttggcttaattgcacttt-cccccctatcttttgctaattgtgcgattttgcaccccc 195  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  11883983 tttggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcaccccc 11883925  T

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Target: chr2; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 144 - 244
Target Start/End: Complemental strand, 40469780 - 40469680
Alignment:
Q  144 ttaattgcactttc-ccccctatcttttgctaattgtgcgattttgcacccccctcnnnnnnnnngagcgattttgcaccccatctttttgccccctctc 242  Q
    |||||||||||||  |||||||||||||||||||||||||||||||||| ||||||         |||||||||||||||||||||||||||||||| ||    
T  40469780 ttaattgcactttttccccctatcttttgctaattgtgcgattttgcac-cccctctttttttttgagcgattttgcaccccatctttttgccccctttc 40469682  T
Q  243 tg 244  Q
    ||    
T  40469681 tg 40469680  T

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Target: chr2; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 141 - 239
Target Start/End: Original strand, 11883623 - 11883721
Alignment:
Q  141 ggcttaattgcacttt-cccccctatcttttgctaattgtgcgattttgcacccccctcnnnnnnnnngagcgattttgcaccccatctttttgccccct 239  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||         |||| |||||||||| ||||||||||||||||    
T  11883623 ggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgca-ccccctctttttttttgagcaattttgcacctcatctttttgccccct 11883721  T

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Target: chr2; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 8 - 140
Target Start/End: Complemental strand, 25132681 - 25132549
Alignment:
Q  8 tgttgatgataagtgtgcttgatgactacttgatcgtgatatttgggattgttatgtgaatgtgtatattgaattaactatttatgtgaagtactcgaaa 107  Q
    ||||| ||||||||||||||| ||| |||||  ||||||||||||| ||||| ||||||| |||||||||||||||| |  |||||| ||||||| | ||    
T  25132681 tgttggtgataagtgtgcttggtgagtacttattcgtgatatttggaattgtcatgtgaaggtgtatattgaattaaatgcttatgttaagtacttggaa 25132582  T
Q  108 aagattttaattcatatatgctcaaatttattt 140  Q
         ||||||||||||||| |||||| |||||    
T  25132581 cttgatttaattcatatatgttcaaatctattt 25132549  T

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Target: chr2; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 139 - 192
Target Start/End: Original strand, 6171154 - 6171207
Alignment:
Q  139 ttggcttaattgcactttcccccctatcttttgctaattgtgcgattttgcacc 192  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||||||||    
T  6171154 ttggcttaattgcacttttccccctatcttttgttaattgtgcgattttgcacc 6171207  T

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Target: chr2; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 141 - 244
Target Start/End: Complemental strand, 20347518 - 20347415
Alignment:
Q  141 ggcttaattgcacttt-cccccctatcttttgctaattgtgcgattttgcacccccctcnnnnnnnnngagcgattttgcaccccatctttttgccccct 239  Q
    |||||||||||||||| |||||||||||||||| |||||||||||||||||| ||||||         ||| |||||||||||||||||||||| |||||    
T  20347518 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcac-cccctctttttttttgagggattttgcaccccatctttttgtcccct 20347420  T
Q  240 ctctg 244  Q
     ||||    
T  20347419 ttctg 20347415  T

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Target: chr2; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 138 - 195
Target Start/End: Complemental strand, 43495661 - 43495604
Alignment:
Q  138 tttggcttaattgcactttcccccctatcttttgctaattgtgcgattttgcaccccc 195  Q
    |||||||||||||||||||||| ||||| |||||||||||||||||||||||| ||||    
T  43495661 tttggcttaattgcactttcccacctatattttgctaattgtgcgattttgcatcccc 43495604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 133 - 195
Target Start/End: Complemental strand, 30191287 - 30191224
Alignment:
Q  133 atttatttggcttaattgcacttt-cccccctatcttttgctaattgtgcgattttgcaccccc 195  Q
    |||| ||||||||||||||||||| ||||||||||||||  |||||||||||||||||||||||    
T  30191287 atttttttggcttaattgcacttttcccccctatcttttattaattgtgcgattttgcaccccc 30191224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 141 - 244
Target Start/End: Complemental strand, 6171510 - 6171408
Alignment:
Q  141 ggcttaattgcacttt-cccccctatcttttgctaattgtgcgattttgcacccccctcnnnnnnnnngagcgattttgcaccccatctttttgccccct 239  Q
    |||||||||||||||| |||||||||||||||| ||||||| |||||||||  ||||||         |||| |||||||||||||||||||||||||||    
T  6171510 ggcttaattgcacttttcccccctatcttttgccaattgtgggattttgca--cccctctttttttttgagcaattttgcaccccatctttttgccccct 6171413  T
Q  240 ctctg 244  Q
     ||||    
T  6171412 ttctg 6171408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 138 - 194
Target Start/End: Complemental strand, 26737838 - 26737781
Alignment:
Q  138 tttggcttaattgcactttcc-cccctatcttttgctaattgtgcgattttgcacccc 194  Q
    ||||||||||||||||||| | ||||||||||||||||| ||||||||||||||||||    
T  26737838 tttggcttaattgcacttttcacccctatcttttgctaactgtgcgattttgcacccc 26737781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 139 - 192
Target Start/End: Original strand, 40221311 - 40221364
Alignment:
Q  139 ttggcttaattgcactttcccccctatcttttgctaattgtgcgattttgcacc 192  Q
    ||||||||||||||| || |||||||||||||||||||||| ||||||||||||    
T  40221311 ttggcttaattgcacctttccccctatcttttgctaattgttcgattttgcacc 40221364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 143 - 195
Target Start/End: Original strand, 18055050 - 18055101
Alignment:
Q  143 cttaattgcactttcccccctatcttttgctaattgtgcgattttgcaccccc 195  Q
    |||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  18055050 cttaattgcacttttcccccta-cttttgctaattgtgcgattttgcaccccc 18055101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 50 - 102
Target Start/End: Original strand, 30994734 - 30994786
Alignment:
Q  50 ttgggattgttatgtgaatgtgtatattgaattaactatttatgtgaagtact 102  Q
    |||| |||||||||||||||||||||||||||||||| ||||||| |||||||    
T  30994734 ttggaattgttatgtgaatgtgtatattgaattaactgtttatgttaagtact 30994786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 144 - 195
Target Start/End: Complemental strand, 32673193 - 32673142
Alignment:
Q  144 ttaattgcactttcccccctatcttttgctaattgtgcgattttgcaccccc 195  Q
    |||||||||||||  |||||||||||||| ||||||||||||||||||||||    
T  32673193 ttaattgcactttttcccctatcttttgccaattgtgcgattttgcaccccc 32673142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 141 - 194
Target Start/End: Complemental strand, 2639536 - 2639482
Alignment:
Q  141 ggcttaattgcactttcc-cccctatcttttgctaattgtgcgattttgcacccc 194  Q
    |||||||||||||||| | |||||||||||||| |||||||||||||||||||||    
T  2639536 ggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacccc 2639482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 141 - 194
Target Start/End: Complemental strand, 18296747 - 18296693
Alignment:
Q  141 ggcttaattgcactttcc-cccctatcttttgctaattgtgcgattttgcacccc 194  Q
    |||||||||||||||| | |||||||||||||| |||||||||||||||||||||    
T  18296747 ggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacccc 18296693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 141 - 195
Target Start/End: Original strand, 26737482 - 26737535
Alignment:
Q  141 ggcttaattgcactttcccccctatcttttgctaattgtgcgattttgcaccccc 195  Q
    |||||||||||||||| | || |||||||||||||||||||||||||||||||||    
T  26737482 ggcttaattgcacttttctcc-tatcttttgctaattgtgcgattttgcaccccc 26737535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 141 - 194
Target Start/End: Original strand, 26841587 - 26841641
Alignment:
Q  141 ggcttaattgcactttcc-cccctatcttttgctaattgtgcgattttgcacccc 194  Q
    |||||||||||||||| | |||||||||||||| |||||||||||||||||||||    
T  26841587 ggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacccc 26841641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 138 - 195
Target Start/End: Original strand, 40469424 - 40469482
Alignment:
Q  138 tttggcttaattgcactttcccc-cctatcttttgctaattgtgcgattttgcaccccc 195  Q
    ||||||||||||| | ||| ||| |||||||||||||||||||||||||||||||||||    
T  40469424 tttggcttaattgtatttttccctcctatcttttgctaattgtgcgattttgcaccccc 40469482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 138 - 194
Target Start/End: Original strand, 17850975 - 17851032
Alignment:
Q  138 tttggcttaattgcacttt-cccccctatcttttgctaattgtgcgattttgcacccc 194  Q
    ||||||||||||||||||| |||||||||  ||||| |||||||||||||||||||||    
T  17850975 tttggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 17851032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 138 - 194
Target Start/End: Complemental strand, 26842295 - 26842238
Alignment:
Q  138 tttggcttaattgcactttcc-cccctatcttttgctaattgtgcgattttgcacccc 194  Q
    |||||||||| |||||||| | |||||||||||||| |||||||||||||||||||||    
T  26842295 tttggcttaagtgcacttttcacccctatcttttgccaattgtgcgattttgcacccc 26842238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 142 - 194
Target Start/End: Complemental strand, 16911321 - 16911269
Alignment:
Q  142 gcttaattgcactttcccccctatcttttgctaattgtgcgattttgcacccc 194  Q
    |||||||||||||||| |||||||  ||||| |||||||||||||||||||||    
T  16911321 gcttaattgcactttcgcccctatagtttgccaattgtgcgattttgcacccc 16911269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 192
Target Start/End: Complemental strand, 17346088 - 17346037
Alignment:
Q  141 ggcttaattgcactttcccccctatcttttgctaattgtgcgattttgcacc 192  Q
    ||||||||||||||||  ||  ||||||||||||||||||||||||||||||    
T  17346088 ggcttaattgcactttttcctttatcttttgctaattgtgcgattttgcacc 17346037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 141 - 194
Target Start/End: Original strand, 2638820 - 2638874
Alignment:
Q  141 ggcttaattgcactttcc-cccctatcttttgctaattgtgcgattttgcacccc 194  Q
    |||||||||||| ||| | |||||||||||||| |||||||||||||||||||||    
T  2638820 ggcttaattgcatttttcacccctatcttttgccaattgtgcgattttgcacccc 2638874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 141 - 194
Target Start/End: Original strand, 5378661 - 5378715
Alignment:
Q  141 ggcttaattgcacttt-cccccctatcttttgctaattgtgcgattttgcacccc 194  Q
    |||||||||||||||| |||||||||  ||||| |||||||||||||||||||||    
T  5378661 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 5378715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 141 - 194
Target Start/End: Original strand, 20347163 - 20347217
Alignment:
Q  141 ggcttaattgcactttccccc-ctatcttttgctaattgtgcgattttgcacccc 194  Q
    ||||||||| |||||| |||| |||||||||| ||||||||||||||||||||||    
T  20347163 ggcttaattacacttttcccctctatcttttgttaattgtgcgattttgcacccc 20347217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 141 - 194
Target Start/End: Original strand, 37720204 - 37720258
Alignment:
Q  141 ggcttaattgcacttt-cccccctatcttttgctaattgtgcgattttgcacccc 194  Q
    |||||||||||||||| |||||||||  ||||| |||||||||||||||||||||    
T  37720204 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 37720258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 141 - 194
Target Start/End: Complemental strand, 41790966 - 41790912
Alignment:
Q  141 ggcttaattgcacttt-cccccctatcttttgctaattgtgcgattttgcacccc 194  Q
    |||||||||||||||| ||||||||| |||||| |||||||||||||||| ||||    
T  41790966 ggcttaattgcacttttcccccctatattttgccaattgtgcgattttgcccccc 41790912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 138 - 194
Target Start/End: Complemental strand, 7591907 - 7591850
Alignment:
Q  138 tttggcttaattgca-ctttcccccctatcttttgctaattgtgcgattttgcacccc 194  Q
    ||||||||||||||| ||||| | |||||||||||  |||||||||||||||||||||    
T  7591907 tttggcttaattgcatctttcactcctatcttttgtcaattgtgcgattttgcacccc 7591850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 141 - 194
Target Start/End: Complemental strand, 7980056 - 7980003
Alignment:
Q  141 ggcttaattgcactttcccccctatcttttgctaattgtgcgattttgcacccc 194  Q
    ||||||||||||||||  || ||||  |||||||||||||||||||||||||||    
T  7980056 ggcttaattgcactttttcctctatagtttgctaattgtgcgattttgcacccc 7980003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 154 - 195
Target Start/End: Original strand, 15920792 - 15920833
Alignment:
Q  154 tttcccccctatcttttgctaattgtgcgattttgcaccccc 195  Q
    |||||| ||||||||||| |||||||||||||||||||||||    
T  15920792 tttccctcctatcttttgttaattgtgcgattttgcaccccc 15920833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 142 - 194
Target Start/End: Original strand, 18296077 - 18296130
Alignment:
Q  142 gcttaattgcactttcc-cccctatcttttgctaattgtgcgattttgcacccc 194  Q
    ||||||||| ||||| | |||||||||||||| |||||||||||||||||||||    
T  18296077 gcttaattgtacttttcacccctatcttttgccaattgtgcgattttgcacccc 18296130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 192
Target Start/End: Complemental strand, 6495775 - 6495723
Alignment:
Q  141 ggcttaattgcactttccc-ccctatcttttgctaattgtgcgattttgcacc 192  Q
    |||||||||||||||| || ||||||||||||  |||||||||||||||||||    
T  6495775 ggcttaattgcacttttcctccctatcttttgtgaattgtgcgattttgcacc 6495723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 194
Target Start/End: Original strand, 7591215 - 7591255
Alignment:
Q  154 tttcccccctatcttttgctaattgtgcgattttgcacccc 194  Q
    |||| |||||||||||||| |||||||||||||||||||||    
T  7591215 tttcacccctatcttttgccaattgtgcgattttgcacccc 7591255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 195
Target Start/End: Complemental strand, 43495535 - 43495483
Alignment:
Q  144 ttaattgcactttcccccctatc-ttttgctaattgtgcgattttgcaccccc 195  Q
    ||||||||||||| ||||||||| |||||  ||||||||||||||||||||||    
T  43495535 ttaattgcacttttccccctatctttttgtcaattgtgcgattttgcaccccc 43495483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 144 - 194
Target Start/End: Original strand, 8851151 - 8851202
Alignment:
Q  144 ttaattgcacttt-cccccctatcttttgctaattgtgcgattttgcacccc 194  Q
    ||||||||||||| |||||||||  ||||| |||||||||||||||||||||    
T  8851151 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 8851202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 143 - 237
Target Start/End: Original strand, 15321394 - 15321486
Alignment:
Q  143 cttaattgcactttcccccctatcttttgctaattgtgcgattttgcacccccctcnnnnnnnnngagcgattttgcaccccatctttttgcccc 237  Q
    |||||||||||||| |||| ||||||||| ||||||||| |||||||| |||| |          ||||||||||||||||||||||||||||||    
T  15321394 cttaattgcacttttcccc-tatcttttgttaattgtgcaattttgcatcccc-tattttattttgagcgattttgcaccccatctttttgcccc 15321486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 144 - 195
Target Start/End: Original strand, 17345736 - 17345786
Alignment:
Q  144 ttaattgcactttcccccctatcttttgctaattgtgcgattttgcaccccc 195  Q
    ||||||||||||| |||| ||||||||||||||| ||| |||||||||||||    
T  17345736 ttaattgcacttttcccc-tatcttttgctaattatgcaattttgcaccccc 17345786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 141 - 187
Target Start/End: Original strand, 43495309 - 43495356
Alignment:
Q  141 ggcttaattgcactttcccc-cctatcttttgctaattgtgcgatttt 187  Q
    |||||||||||||||| ||| ||||| |||||||||||||||||||||    
T  43495309 ggcttaattgcacttttcccacctatattttgctaattgtgcgatttt 43495356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 194
Target Start/End: Complemental strand, 5380013 - 5379959
Alignment:
Q  141 ggcttaattgcacttt-cccccctatcttttgctaattgtgcgattttgcacccc 194  Q
    |||||||||||||||| |||||||||  ||| | |||||||||||||||||||||    
T  5380013 ggcttaattgcacttttcccccctatagtttaccaattgtgcgattttgcacccc 5379959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 194
Target Start/End: Complemental strand, 7664735 - 7664673
Alignment:
Q  133 atttatttggcttaattgcactttccc-ccctatcttttgctaattgtgcgattttgcacccc 194  Q
    |||| ||||||||||||||||||| || ||||||  ||||  |||||||||||||||||||||    
T  7664735 atttttttggcttaattgcacttttcctccctatagtttgtcaattgtgcgattttgcacccc 7664673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 194
Target Start/End: Complemental strand, 8851636 - 8851582
Alignment:
Q  141 ggcttaattgcacttt-cccccctatcttttgctaattgtgcgattttgcacccc 194  Q
    |||||||||||||||| |||||||||  ||||  |||||||||||||||||||||    
T  8851636 ggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcacccc 8851582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 194
Target Start/End: Complemental strand, 26692878 - 26692820
Alignment:
Q  137 atttggcttaattgcactttccccc-ctatcttttgctaattgtgcgattttgcacccc 194  Q
    |||||| ||||||||||||| |||| ||||  ||||| |||||||||||||||||||||    
T  26692878 atttggtttaattgcacttttcccctctatagtttgccaattgtgcgattttgcacccc 26692820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 190
Target Start/End: Complemental strand, 38490895 - 38490845
Alignment:
Q  140 tggcttaattgcactttcccccctatcttttgctaattgtgcgattttgca 190  Q
    ||||||||||||||||||| ||||||  ||| | |||||||||||||||||    
T  38490895 tggcttaattgcactttcctccctatagtttaccaattgtgcgattttgca 38490845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 137 - 190
Target Start/End: Complemental strand, 19141905 - 19141853
Alignment:
Q  137 atttggcttaattgcactttcccccctatcttttgctaattgtgcgattttgca 190  Q
    |||||| |||||||||||||||||| |||  ||||| |||||||||||||||||    
T  19141905 atttggtttaattgcactttccccc-tatagtttgccaattgtgcgattttgca 19141853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 146 - 193
Target Start/End: Complemental strand, 26737706 - 26737657
Alignment:
Q  146 aattgcactttc-ccccctatctttt-gctaattgtgcgattttgcaccc 193  Q
    |||||||||||  ||||||||||||| |||||||||||||||||||||||    
T  26737706 aattgcacttttgccccctatctttttgctaattgtgcgattttgcaccc 26737657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 158 - 194
Target Start/End: Complemental strand, 40221525 - 40221488
Alignment:
Q  158 ccccctatctttt-gctaattgtgcgattttgcacccc 194  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  40221525 ccccctatctttttgctaattgtgcgattttgcacccc 40221488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 193
Target Start/End: Original strand, 6495468 - 6495519
Alignment:
Q  142 gcttaattgcactttccc-ccctatcttttgctaattgtgcgattttgcaccc 193  Q
    ||||||||||||||| || |||||||||| | |||||||||||||||||||||    
T  6495468 gcttaattgcacttttcctccctatcttt-gttaattgtgcgattttgcaccc 6495519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 194
Target Start/End: Complemental strand, 18750178 - 18750126
Alignment:
Q  142 gcttaattgcactttcccccctatcttttgctaattgtgcgattttgcacccc 194  Q
    ||||||||||||||  ||||||||  ||||  |||||||||||||||||||||    
T  18750178 gcttaattgcacttctccccctatagtttgtcaattgtgcgattttgcacccc 18750126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 193
Target Start/End: Original strand, 32672839 - 32672895
Alignment:
Q  138 tttggcttaattgcactttcccccct-atcttttgctaattgtgcgattttgcaccc 193  Q
    |||||||||||||||||||    ||| |||||||| |||||||||||||||||||||    
T  32672839 tttggcttaattgcacttttgttccttatcttttgttaattgtgcgattttgcaccc 32672895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 192
Target Start/End: Complemental strand, 40469655 - 40469607
Alignment:
Q  146 aattgcactttcccccct-atc-ttttgctaattgtgcgattttgcacc 192  Q
    ||||||||||| |||||| ||| ||||||||||||||||||||||||||    
T  40469655 aattgcacttttcccccttatcgttttgctaattgtgcgattttgcacc 40469607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319 (Bit Score: 62; Significance: 7e-27; HSPs: 2)
Name: scaffold0319
Description:

Target: scaffold0319; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 140 - 244
Target Start/End: Complemental strand, 6751 - 6648
Alignment:
Q  140 tggcttaattgcactttcccccctatcttttgctaattgtgcgattttgcacccccctcnnnnnnnnngagcgattttgcaccccatctttttgccccct 239  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||         ||||||||||||||||||||||||||||||||    
T  6751 tggcttaattgcacttttccccctatcttttgctaattgtgcgattttgcac-cccctctttttttttgagcgattttgcaccccatctttttgccccct 6653  T
Q  240 ctctg 244  Q
     ||||    
T  6652 ttctg 6648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 141 - 195
Target Start/End: Original strand, 6394 - 6449
Alignment:
Q  141 ggcttaattgcacttt-cccccctatcttttgctaattgtgcgattttgcaccccc 195  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  6394 ggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcaccccc 6449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 59; Significance: 4e-25; HSPs: 2)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 135 - 244
Target Start/End: Complemental strand, 45866 - 45758
Alignment:
Q  135 ttatttggcttaattgcactttcccccctatcttttgctaattgtgcgattttgcacccccctcnnnnnnnnngagcgattttgcaccccatctttttgc 234  Q
    ||||| |||||||||||||||| ||||||||||||||| |||||||||||||||||| ||||||         |||||||||||||||||||||||||||    
T  45866 ttattaggcttaattgcacttttccccctatcttttgccaattgtgcgattttgcac-cccctctttttttttgagcgattttgcaccccatctttttgc 45768  T
Q  235 cccctctctg 244  Q
    ||||| ||||    
T  45767 cccctttctg 45758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 141 - 191
Target Start/End: Original strand, 45537 - 45587
Alignment:
Q  141 ggcttaattgcactttcccccctatcttttgctaattgtgcgattttgcac 191  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||||||    
T  45537 ggcttaattgcacttttccccctatcttttgttaattgtgcgattttgcac 45587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 141 - 237
Target Start/End: Complemental strand, 25423 - 25327
Alignment:
Q  141 ggcttaattgcacttt-cccccctatcttttgctaattgtgcgattttgcacccccctcnnnnnnnnngagcgattttgcaccccatctttttgcccc 237  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||         ||||||||||||||||||||||||||||||    
T  25423 ggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcac-cccctctttttttttgagcgattttgcaccccatctttttgcccc 25327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802 (Bit Score: 52; Significance: 7e-21; HSPs: 2)
Name: scaffold0802
Description:

Target: scaffold0802; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 139 - 244
Target Start/End: Complemental strand, 1476 - 1371
Alignment:
Q  139 ttggcttaattgcactttc-ccccctatcttttgctaattgtgcgattttgcacccccctcnnnnnnnnngagcgattttgcaccccatctttttgcccc 237  Q
    ||||||||||||||||||  ||||||||||||||| |||||||||||||||||| ||||||         ||||||||||||||||||||||||||||||    
T  1476 ttggcttaattgcactttttccccctatcttttgccaattgtgcgattttgcac-cccctctttttttttgagcgattttgcaccccatctttttgcccc 1378  T
Q  238 ctctctg 244  Q
    || ||||    
T  1377 ctttctg 1371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 139 - 195
Target Start/End: Original strand, 1116 - 1173
Alignment:
Q  139 ttggcttaattgcactttc-ccccctatcttttgctaattgtgcgattttgcaccccc 195  Q
    ||||||||||||||||||  |||||||||||||| |||||||||||||||||||||||    
T  1116 ttggcttaattgcactttttccccctatcttttgttaattgtgcgattttgcaccccc 1173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0442 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0442
Description:

Target: scaffold0442; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 1671 - 1810
Alignment:
Q  1 tgataattgttgatgataagtgtgcttgatgactacttgatcgtgatatttgggattgttatgtgaatgtgtatattgaattaactatttatgtgaagta 100  Q
    |||| ||||||||||||||||||||||| ||| |||||  ||||||||| ||| ||| ||||||||| |||||||||||||||| |  |||||| |||||    
T  1671 tgatgattgttgatgataagtgtgcttggtgagtacttattcgtgatatctggaattattatgtgaaggtgtatattgaattaaattcttatgttaagta 1770  T
Q  101 ctcgaaaaagattttaattcatatatgctcaaatttattt 140  Q
    || | ||     ||||||||| ||||| ||||||||||||    
T  1771 cttggaacttgatttaattcacatatgttcaaatttattt 1810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 51; Significance: 3e-20; HSPs: 4)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 138 - 195
Target Start/End: Original strand, 438927 - 438985
Alignment:
Q  138 tttggcttaattgcacttt-cccccctatcttttgctaattgtgcgattttgcaccccc 195  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  438927 tttggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcaccccc 438985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 195
Target Start/End: Complemental strand, 183716 - 183662
Alignment:
Q  141 ggcttaattgcacttt-cccccctatcttttgctaattgtgcgattttgcaccccc 195  Q
    |||||||||||||||| ||||||||| ||||||||||||||||| |||||||||||    
T  183716 ggcttaattgcacttttcccccctatattttgctaattgtgcga-tttgcaccccc 183662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 195
Target Start/End: Complemental strand, 439253 - 439198
Alignment:
Q  141 ggcttaattgcactttcccccct-atcttttgctaattgtgcgattttgcaccccc 195  Q
    ||||||||||||||||  ||||| ||||||||||||||||||||||||||| ||||    
T  439253 ggcttaattgcactttttccccttatcttttgctaattgtgcgattttgcatcccc 439198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 144 - 193
Target Start/End: Original strand, 183367 - 183416
Alignment:
Q  144 ttaattgcactttcccccctatcttttgctaattgtgcgattttgcaccc 193  Q
    ||||||||||||| ||||||||||||||  |||||| |||||||||||||    
T  183367 ttaattgcacttttccccctatcttttgtcaattgtacgattttgcaccc 183416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 139 - 192
Target Start/End: Complemental strand, 17211 - 17158
Alignment:
Q  139 ttggcttaattgcactttcccccctatcttttgctaattgtgcgattttgcacc 192  Q
    |||||||||||||||||| |||||||||||||||||||||||| ||||||||||    
T  17211 ttggcttaattgcacttttccccctatcttttgctaattgtgcaattttgcacc 17158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 139 - 195
Target Start/End: Original strand, 16851 - 16906
Alignment:
Q  139 ttggcttaattgcactttcccccctatcttttgctaattgtgcgattttgcaccccc 195  Q
    ||||||||||||| ||||  ||||||||||||||||||||||||||| |||||||||    
T  16851 ttggcttaattgc-ctttttcccctatcttttgctaattgtgcgattatgcaccccc 16906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 107
Target Start/End: Original strand, 1827 - 1927
Alignment:
Q  7 ttgttgatgataagtgtgcttgatgactacttgatcgtgatatttgggattgttatgtgaatgtgtatattgaattaactatttatgtgaagtactcgaa 106  Q
    |||||||||||||||||||||| ||  |||||||||||  ||||| ||| |||||||| |||||  |||||||||||| | ||||||| ||||||| |||    
T  1827 ttgttgatgataagtgtgcttggtggatacttgatcgtattattttggaatgttatgtaaatgtacatattgaattaattgtttatgttaagtacttgaa 1926  T
Q  107 a 107  Q
    |    
T  1927 a 1927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0376 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 140 - 195
Target Start/End: Complemental strand, 7654 - 7599
Alignment:
Q  140 tggcttaattgcactttcccccctatcttttgctaattgtgcgattttgcaccccc 195  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||| ||||||    
T  7654 tggcttaattgcactttttcccctatcttttgctaattgtgcgattttgtaccccc 7599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0376; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 141 - 194
Target Start/End: Original strand, 7455 - 7508
Alignment:
Q  141 ggcttaattgcactttcccccctatcttttgctaattgtgcgattttgcacccc 194  Q
    ||||||||||||||||  ||||||||||||||||||| ||||||||||||||||    
T  7455 ggcttaattgcactttttcccctatcttttgctaattatgcgattttgcacccc 7508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 141 - 195
Target Start/End: Original strand, 205687 - 205741
Alignment:
Q  141 ggcttaattgcactttcccccctatcttttgctaattgtgcgattttgcaccccc 195  Q
    |||||||||||| ||| | ||||||||||||||||||||||||||||||||||||    
T  205687 ggcttaattgcatttttctccctatcttttgctaattgtgcgattttgcaccccc 205741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 141 - 195
Target Start/End: Original strand, 411923 - 411977
Alignment:
Q  141 ggcttaattgcactttcccccctatcttttgctaattgtgcgattttgcaccccc 195  Q
    |||||||||||||||| ||||||||||||||  ||||||||||||||||||||||    
T  411923 ggcttaattgcactttaccccctatcttttgtcaattgtgcgattttgcaccccc 411977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 138 - 195
Target Start/End: Complemental strand, 50563 - 50506
Alignment:
Q  138 tttggcttaattgcactttcccccctatcttttgctaattgtgcgattttgcaccccc 195  Q
    ||||||||||||||||||| ||||||||  ||||| ||||||||||||||||||||||    
T  50563 tttggcttaattgcacttttccccctatagtttgccaattgtgcgattttgcaccccc 50506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 105
Target Start/End: Original strand, 6897 - 6989
Alignment:
Q  13 atgataagtgtgcttgatgactacttgatcgtgatatttgggattgttatgtgaatgtgtatattgaattaactatttatgtgaagtactcga 105  Q
    ||||||| |||| ||| ||| || ||||| ||| || |||||||| ||||||| | |||||||||||||||||| | ||||||||||||||||    
T  6897 atgataaatgtgattggtgaataattgattgtgttaattgggattattatgtgtaagtgtatattgaattaactgtctatgtgaagtactcga 6989  T

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Target: scaffold0598 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 2)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 142 - 193
Target Start/End: Complemental strand, 6927 - 6877
Alignment:
Q  142 gcttaattgcactttcccccctatcttttgctaattgtgcgattttgcaccc 193  Q
    ||||||||||||||||||||||||||||||| |||||||| |||||||||||    
T  6927 gcttaattgcactttcccccctatcttttgccaattgtgc-attttgcaccc 6877  T

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Target: scaffold0598; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 143 - 192
Target Start/End: Original strand, 6609 - 6659
Alignment:
Q  143 cttaattgcact-ttcccccctatcttttgctaattgtgcgattttgcacc 192  Q
    |||||||||||| ||||||||||||||||| |||||||| |||||||||||    
T  6609 cttaattgcactgttcccccctatcttttgttaattgtgtgattttgcacc 6659  T

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Target: scaffold0107 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 11 - 102
Target Start/End: Complemental strand, 11897 - 11806
Alignment:
Q  11 tgatgataagtgtgcttgatgactacttgatcgtgatatttgggattgttatgtgaatgtgtatattgaattaactatttatgtgaagtact 102  Q
    ||||||||||||| |||| ||| |||||| ||||  |||||  || |||||||| |||||  |||||||||||||||||||||| |||||||    
T  11897 tgatgataagtgtacttggtgaatacttggtcgtattattttagaatgttatgtaaatgtacatattgaattaactatttatgttaagtact 11806  T

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Target: scaffold1221 (Bit Score: 37; Significance: 0.000000000006; HSPs: 2)
Name: scaffold1221
Description:

Target: scaffold1221; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 138 - 194
Target Start/End: Original strand, 1508 - 1564
Alignment:
Q  138 tttggcttaattgcactttcccccctatcttttgctaattgtgcgattttgcacccc 194  Q
    |||||||||||||||||||  || ||||||||||| ||||||| |||||||||||||    
T  1508 tttggcttaattgcactttttcctctatcttttgccaattgtgtgattttgcacccc 1564  T

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Target: scaffold1221; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 144 - 192
Target Start/End: Complemental strand, 1834 - 1786
Alignment:
Q  144 ttaattgcactttcccccctatcttttgctaattgtgcgattttgcacc 192  Q
    ||||||||||||| |||||||||||||| | ||||||||||||||||||    
T  1834 ttaattgcacttttccccctatcttttgtttattgtgcgattttgcacc 1786  T

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Target: scaffold0460 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 138 - 194
Target Start/End: Complemental strand, 819 - 763
Alignment:
Q  138 tttggcttaattgcactttcccccctatcttttgctaattgtgcgattttgcacccc 194  Q
    |||||||||||||||||||  |||||||  ||||| |||||||||||||||||||||    
T  819 tttggcttaattgcactttttcccctatagtttgccaattgtgcgattttgcacccc 763  T

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Target: scaffold0328 (Bit Score: 37; Significance: 0.000000000006; HSPs: 2)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 139 - 194
Target Start/End: Original strand, 6150 - 6206
Alignment:
Q  139 ttggcttaattgcactttccccc-ctatcttttgctaattgtgcgattttgcacccc 194  Q
    |||||||||||||||||| | || |||||||||||||||||||||||||| ||||||    
T  6150 ttggcttaattgcacttttcacctctatcttttgctaattgtgcgattttacacccc 6206  T

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Target: scaffold0328; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 141 - 194
Target Start/End: Complemental strand, 6849 - 6795
Alignment:
Q  141 ggcttaattgcactttcc-cccctatcttttgctaattgtgcgattttgcacccc 194  Q
    |||||||||||| ||| | |||||||||||||| |||||||||||||||||||||    
T  6849 ggcttaattgcatttttcacccctatcttttgccaattgtgcgattttgcacccc 6795  T

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Target: scaffold0006 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 134
Target Start/End: Original strand, 199074 - 199199
Alignment:
Q  7 ttgttgatgataagtgtgcttgatgactacttgatcgtgatatttgggattgttatgtgaatgtgtatattgaattaactatttatgtgaagtactcgaa 106  Q
    ||||| ||||||||||| |||| |||||||||||||||  ||||| ||| |||||||| |||||  |||||| ||||||  ||||||| |||| || | |    
T  199074 ttgttaatgataagtgtacttggtgactacttgatcgtattattt-ggaatgttatgtaaatgtacatattggattaaccgtttatgttaagtgcttgga 199172  T
Q  107 aaagattttaattcatatatgctcaaat 134  Q
    |  || ||||| ||||||||||||||||    
T  199173 attga-tttaactcatatatgctcaaat 199199  T

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Target: scaffold0017 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 194
Target Start/End: Complemental strand, 185330 - 185274
Alignment:
Q  139 ttggcttaattgcactttccc-ccctatcttttgctaattgtgcgattttgcacccc 194  Q
    |||||||||||||||||| || ||||||  ||||| |||||||||||||||||||||    
T  185330 ttggcttaattgcacttttcctccctatagtttgccaattgtgcgattttgcacccc 185274  T

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Target: scaffold0088 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 45296 - 45371
Alignment:
Q  1 tgataattgttgatgataagtgtgcttgatgactacttgatcgtgatatttgggattgttatgtgaatgtgtatat 76  Q
    |||| |||||||||||||||||||  |||||| ||| |  || |||||||||| |||||| |||| ||||||||||    
T  45296 tgatgattgttgatgataagtgtgtctgatgaatacatagtcatgatatttggaattgttgtgtggatgtgtatat 45371  T

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Target: scaffold0010 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 102
Target Start/End: Complemental strand, 29569 - 29474
Alignment:
Q  7 ttgttgatgataagtgtgcttgatgactacttgatcgtgatatttgggattgttatgtgaatgtgtatattgaattaactatttatgtgaagtact 102  Q
    ||||||||||||||||| |||| ||| |||||| |||   ||||| |||  ||||||| |||||  |||||||||||||| ||||||  |||||||    
T  29569 ttgttgatgataagtgtacttggtgaatacttgttcgcattattttggaacgttatgtaaatgtacatattgaattaactgtttatgctaagtact 29474  T

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Target: scaffold0535 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0535
Description:

Target: scaffold0535; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 190
Target Start/End: Original strand, 10012 - 10062
Alignment:
Q  141 ggcttaattgcactttc-ccccctatcttttgctaattgtgcgattttgca 190  Q
    ||||||||||||||||  ||||||||||||||| |||||| ||||||||||    
T  10012 ggcttaattgcacttttgccccctatcttttgccaattgtacgattttgca 10062  T

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Target: scaffold0041 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 194
Target Start/End: Complemental strand, 38749 - 38695
Alignment:
Q  141 ggcttaattgcactttc-ccccctatcttttgctaattgtgcgattttgcacccc 194  Q
    ||||||||||||||||  ||||||||  ||||| |||||||||||||||||||||    
T  38749 ggcttaattgcactttttccccctatagtttgccaattgtgcgattttgcacccc 38695  T

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Target: scaffold0176 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 141 - 194
Target Start/End: Original strand, 19621 - 19674
Alignment:
Q  141 ggcttaattgcactttcccccctatcttttgctaattgtgcgattttgcacccc 194  Q
    |||||||||||| ||| |||| |||  ||||| |||||||||||||||||||||    
T  19621 ggcttaattgcaattttccccatatagtttgccaattgtgcgattttgcacccc 19674  T

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