View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11236_high_14 (Length: 327)
Name: NF11236_high_14
Description: NF11236
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11236_high_14 |
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Alignment Details
Target: chr7 (Bit Score: 309; Significance: 1e-174; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 309; E-Value: 1e-174
Query Start/End: Original strand, 1 - 309
Target Start/End: Complemental strand, 40080515 - 40080207
Alignment:
| Q |
1 |
taagatggatgtcaagacaccgtttctatgttctccaccaccggctaaagcaatggccagtgctaataaaacccatgcagcaacgtcgttaaaagcagct |
100 |
Q |
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| T |
40080515 |
taagatggatgtcaagacaccgtttctatgttctccaccaccggctaaagcaatggccagtgctaataaaacccatgcagcaacgtcgttaaaagcagct |
40080416 |
T |
|
| Q |
101 |
gcggccatggcagtttctcctacttgtgttgttaacaatttaagctctgctaagatgcgtgcgagtacagggaaagcagtgatggagagagatacgccta |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40080415 |
gcggccatggcagtttctcctacttgtgttgttaacaatttaagctctgctaagatgcgtgcgagtacagggaaagcagtgatggagagagatacgccta |
40080316 |
T |
|
| Q |
201 |
agaatatgaagagttgaaagtaactgactttgtgagtttcagagttgaaatggatgactttttggagaaggaaggttactccgatggcgaagaggaatgg |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40080315 |
agaatatgaagagttgaaagtaactgactttgtgagtttcagagttgaaatggatgactttttggagaaggaaggttactccgatggcgaagaggaatgg |
40080216 |
T |
|
| Q |
301 |
gagggatat |
309 |
Q |
| |
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||||||||| |
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| T |
40080215 |
gagggatat |
40080207 |
T |
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