View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11238_low_31 (Length: 240)
Name: NF11238_low_31
Description: NF11238
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11238_low_31 |
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Alignment Details
Target: chr7 (Bit Score: 127; Significance: 1e-65; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 59 - 222
Target Start/End: Original strand, 7152713 - 7152874
Alignment:
| Q |
59 |
aggaggcgttatttatattattaatctacataaatatatcttctatatgtcgtaaagttaaagcgatcaatacttcctatctaaattaaattaaatctta |
158 |
Q |
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| T |
7152713 |
aggaggcgttatttatattatt---ctacataaatatatcttctatatgtcgtaaagttaaagtgatcaatacttactatctaaattaaattaaatctta |
7152809 |
T |
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| Q |
159 |
attatgttttcatgaaagttaaatattt-cccatggtatagttgtatagtatatctagctatcaa |
222 |
Q |
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| T |
7152810 |
attatgttttcatgaaagttaaatatttaccaatagtatagttgtatagtatatctagctatcaa |
7152874 |
T |
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