View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1123_high_27 (Length: 251)
Name: NF1123_high_27
Description: NF1123
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1123_high_27 |
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Alignment Details
Target: chr6 (Bit Score: 239; Significance: 1e-132; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 1824061 - 1824303
Alignment:
| Q |
1 |
tttaacaatatgcagcagcaaaacagtagatatctgaaacaagaaatccataagtttcaatgaatatgatatagtgtgaaagcaatcattcacattaagt |
100 |
Q |
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| T |
1824061 |
tttaacaatatgcagcagcaaaacagtagatatctgaaacaagaaatccataagtttcaatgaatatgatatagtgtgaaagcaatcattcacattaact |
1824160 |
T |
|
| Q |
101 |
tttttcggtttgattagcaaatatatagcatagtttttgcattaggatgaaaaatccataagtttcaatgaaacaatgatatatcaaacactctctctta |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1824161 |
tttttcggtttgattagcaaatatatagcatagtttttgcattaggatgaaaaatccataagtttcaatgaaacaatgatatatcaaacactctctctta |
1824260 |
T |
|
| Q |
201 |
catttcctttatgttatctgttggattttttgtcatctgtggt |
243 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1824261 |
catttcctttatgttatctgttggattttttgtcatctgtggt |
1824303 |
T |
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