View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1123_low_33 (Length: 264)
Name: NF1123_low_33
Description: NF1123
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1123_low_33 |
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Alignment Details
Target: chr5 (Bit Score: 233; Significance: 1e-129; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 1 - 255
Target Start/End: Complemental strand, 12571147 - 12570887
Alignment:
| Q |
1 |
taactgaaataatgcctatgaagaataatgtagcgattgagttgaaatcatagagatctcccacagattgtagctctccaagagctaaccctgcctgtag |
100 |
Q |
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| T |
12571147 |
taactgaaataatgcctatgaagaataatgtagcgattgagttgaaatcatagagatctcccacagattgtagctctccaagagctaaccctgcctgtag |
12571048 |
T |
|
| Q |
101 |
aacaaaacaaaa-----aactcaaacacaagcacaatgggagaggaaaagagaaggggagaggaaagttatttcagtttacaacagagtcagggcaggcc |
195 |
Q |
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|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
12571047 |
aacaaaacaaaacaaaaaactcaaacacaagcacaatgggagaggaaaagagaaggggagaggaaagttatttcagtttacaacagagtcagggcaggcc |
12570948 |
T |
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| Q |
196 |
caatgtcgagacaactaaagccctaacttatgggttgataaata-aaaagaccacctatga |
255 |
Q |
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| T |
12570947 |
caatgtcgagacaactaaagccctaacttatgggttgataaataaaaaagaccacctatga |
12570887 |
T |
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