View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1123_low_35 (Length: 253)
Name: NF1123_low_35
Description: NF1123
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1123_low_35 |
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| [»] chr6 (1 HSPs) |
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Alignment Details
Target: chr6 (Bit Score: 124; Significance: 7e-64; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 122 - 253
Target Start/End: Original strand, 1823868 - 1823999
Alignment:
| Q |
122 |
aaaattttaagagagaaagatacattactagttatgtagtagaaaactttatcatccatcttcaaccgtgatctatttggactatcattgtaacttggaa |
221 |
Q |
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| T |
1823868 |
aaaattttaagagagaaagatacattactagttatttagtagaaaactttatcatccatcatcaaccgtgatctatttggactatcattgtaacttggaa |
1823967 |
T |
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| Q |
222 |
aaatgttatattaattaattgtgtattttctt |
253 |
Q |
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|||||||||||||||||||||||||||||||| |
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| T |
1823968 |
aaatgttatattaattaattgtgtattttctt |
1823999 |
T |
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