View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1123_low_8 (Length: 423)
Name: NF1123_low_8
Description: NF1123
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1123_low_8 |
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Alignment Details
Target: chr6 (Bit Score: 201; Significance: 1e-109; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 188 - 396
Target Start/End: Complemental strand, 490306 - 490098
Alignment:
| Q |
188 |
tcataagtttgaaagtttcaataatcttcatcctatgctcagaatatatactgaacaaaggaccattttgaagaagtaggccatggtatttgaatcacaa |
287 |
Q |
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| T |
490306 |
tcataagtttgaaagtttcaataatcttcatcctatgctcagaatatatactgaacaaaggaccattttgaagaactaggccatggtacttgaatcacaa |
490207 |
T |
|
| Q |
288 |
ccatgaactctttatattcaaaatcaacttctttgccatcaattccacaagcccttggtttctctgaagcatagaccctcatctcaccagcacctctaat |
387 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
490206 |
ccatgaactctttatattcaaaatcaacttctttgccatcaattccacaagcccttggtttctctgaagcatagaccctcatctcaccagcacctctaat |
490107 |
T |
|
| Q |
388 |
tccaacttg |
396 |
Q |
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| T |
490106 |
tccaacttg |
490098 |
T |
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