View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11240_low_1 (Length: 835)

Name: NF11240_low_1
Description: NF11240
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11240_low_1
NF11240_low_1
[»] chr6 (15 HSPs)
chr6 (9-282)||(30748007-30748271)
chr6 (168-282)||(31219161-31219275)
chr6 (183-282)||(31218963-31219062)
chr6 (317-429)||(1947417-1947528)
chr6 (318-429)||(16441775-16441885)
chr6 (9-72)||(30748280-30748343)
chr6 (168-282)||(23507957-23508070)
chr6 (335-398)||(19646027-19646090)
chr6 (47-131)||(29856904-29856988)
chr6 (176-270)||(12676479-12676573)
chr6 (55-129)||(19600133-19600206)
chr6 (197-257)||(6468811-6468871)
chr6 (335-398)||(5138503-5138565)
chr6 (335-429)||(27127493-27127586)
chr6 (47-132)||(29845638-29845723)
[»] chr5 (67 HSPs)
chr5 (1-252)||(19186064-19186305)
chr5 (40-282)||(21069297-21069538)
chr5 (9-269)||(19182971-19183221)
chr5 (1-160)||(13650995-13651159)
chr5 (48-280)||(9537033-9537264)
chr5 (143-282)||(4592869-4593008)
chr5 (168-282)||(8074459-8074573)
chr5 (1-282)||(31946887-31947152)
chr5 (61-282)||(9537943-9538164)
chr5 (143-270)||(25590451-25590577)
chr5 (180-282)||(28591127-28591229)
chr5 (168-282)||(546037-546150)
chr5 (143-282)||(2464677-2464816)
chr5 (168-282)||(16611736-16611850)
chr5 (143-282)||(14891123-14891258)
chr5 (168-282)||(2466775-2466889)
chr5 (744-834)||(13649346-13649435)
chr5 (196-282)||(18400198-18400284)
chr5 (145-269)||(8075811-8075935)
chr5 (183-282)||(40612675-40612774)
chr5 (143-258)||(32641702-32641817)
chr5 (145-263)||(32640315-32640433)
chr5 (176-280)||(18004648-18004752)
chr5 (176-271)||(544668-544762)
chr5 (1-72)||(19183229-19183299)
chr5 (220-282)||(13651173-13651234)
chr5 (177-282)||(16979000-16979105)
chr5 (185-244)||(4594118-4594176)
chr5 (1-72)||(19185992-19186063)
chr5 (177-282)||(13483029-13483133)
chr5 (54-135)||(32555434-32555514)
chr5 (1-45)||(544966-545010)
chr5 (1-45)||(4593174-4593218)
chr5 (1-45)||(40612418-40612462)
chr5 (1-40)||(545803-545842)
chr5 (48-119)||(2464820-2464891)
chr5 (1-44)||(4593869-4593912)
chr5 (181-227)||(14881010-14881056)
chr5 (143-250)||(28589739-28589846)
chr5 (1-45)||(2464989-2465033)
chr5 (1-45)||(2466533-2466577)
chr5 (185-282)||(13483174-13483275)
chr5 (1-45)||(14890922-14890966)
chr5 (1-45)||(28590022-28590066)
chr5 (1-45)||(28590873-28590916)
chr5 (63-119)||(28591029-28591085)
chr5 (1-45)||(32640607-32640651)
chr5 (1-45)||(40611579-40611623)
chr5 (327-394)||(28782706-28782773)
chr5 (9-72)||(31946823-31946886)
chr5 (49-119)||(8074601-8074671)
chr5 (49-119)||(8075735-8075805)
chr5 (1-43)||(23773302-23773344)
chr5 (49-119)||(25590581-25590651)
chr5 (49-119)||(40611411-40611481)
chr5 (1-42)||(25590752-25590793)
chr5 (49-105)||(4593025-4593081)
chr5 (1-45)||(8074770-8074814)
chr5 (5-45)||(9537355-9537395)
chr5 (342-398)||(10317259-10317315)
chr5 (49-113)||(32640445-32640509)
chr5 (1-45)||(32641502-32641546)
chr5 (49-119)||(14889920-14889990)
chr5 (49-119)||(14891049-14891119)
chr5 (49-119)||(40612561-40612631)
chr5 (48-129)||(18004799-18004880)
chr5 (245-282)||(24900410-24900447)
[»] chr7 (74 HSPs)
chr7 (168-282)||(48646057-48646171)
chr7 (143-280)||(10899049-10899186)
chr7 (143-282)||(35727707-35727845)
chr7 (186-282)||(44333147-44333243)
chr7 (146-282)||(7258283-7258419)
chr7 (168-282)||(48788673-48788787)
chr7 (49-282)||(46286511-46286744)
chr7 (181-282)||(43457465-43457566)
chr7 (55-270)||(8048672-8048887)
chr7 (168-278)||(8374926-8375036)
chr7 (168-282)||(30925009-30925123)
chr7 (318-425)||(48705644-48705750)
chr7 (168-282)||(48647444-48647558)
chr7 (180-282)||(48777264-48777366)
chr7 (145-261)||(13578299-13578414)
chr7 (141-282)||(44334424-44334564)
chr7 (143-258)||(7259660-7259775)
chr7 (180-282)||(8375596-8375698)
chr7 (143-282)||(35729062-35729201)
chr7 (143-274)||(42477397-42477527)
chr7 (48-282)||(12223580-12223814)
chr7 (182-282)||(45583692-45583792)
chr7 (168-250)||(44529068-44529150)
chr7 (180-242)||(44530624-44530686)
chr7 (145-263)||(12220050-12220167)
chr7 (327-412)||(33474361-33474445)
chr7 (143-237)||(45584472-45584566)
chr7 (180-282)||(39708111-39708213)
chr7 (141-282)||(5930107-5930247)
chr7 (190-282)||(21062825-21062917)
chr7 (63-135)||(24287635-24287707)
chr7 (168-280)||(33607624-33607736)
chr7 (190-282)||(34704917-34705009)
chr7 (1-45)||(48646368-48646412)
chr7 (55-255)||(24288754-24288954)
chr7 (74-234)||(25621628-25621788)
chr7 (80-262)||(27067811-27067992)
chr7 (80-262)||(27210321-27210502)
chr7 (1-46)||(45584256-45584301)
chr7 (191-255)||(10894385-10894449)
chr7 (145-282)||(19433912-19434049)
chr7 (55-232)||(32793229-32793406)
chr7 (1-45)||(42477699-42477743)
chr7 (169-229)||(43461730-43461789)
chr7 (1-45)||(45583906-45583950)
chr7 (1-45)||(48788435-48788479)
chr7 (49-119)||(7258426-7258496)
chr7 (2-44)||(39708442-39708484)
chr7 (62-132)||(39824287-39824357)
chr7 (1-45)||(10898833-10898877)
chr7 (178-270)||(24844593-24844685)
chr7 (1-45)||(44333456-44333500)
chr7 (168-274)||(8879544-8879651)
chr7 (1-40)||(33607276-33607315)
chr7 (1-35)||(7259452-7259486)
chr7 (48-261)||(7509353-7509565)
chr7 (180-258)||(34888936-34889014)
chr7 (49-119)||(44333288-44333358)
chr7 (49-119)||(48788574-48788644)
chr7 (7-44)||(32794560-32794597)
chr7 (1-37)||(30924776-30924812)
chr7 (63-119)||(42477531-42477587)
chr7 (1-44)||(12221623-12221666)
chr7 (70-230)||(22621187-22621347)
chr7 (64-119)||(43457619-43457674)
chr7 (1-40)||(48787608-48787647)
chr7 (48-118)||(384991-385061)
chr7 (48-135)||(8870132-8870221)
chr7 (49-119)||(10898975-10899045)
chr7 (218-293)||(24934799-24934876)
chr7 (49-119)||(48647345-48647415)
chr7 (48-113)||(8375504-8375569)
chr7 (49-102)||(24934965-24935018)
chr7 (168-201)||(33060899-33060932)
[»] chr2 (67 HSPs)
chr2 (49-282)||(21733653-21733889)
chr2 (144-282)||(31091504-31091642)
chr2 (43-282)||(34037549-34037788)
chr2 (180-282)||(32766252-32766354)
chr2 (143-282)||(2910108-2910247)
chr2 (66-269)||(17466727-17466930)
chr2 (169-282)||(40000336-40000449)
chr2 (180-279)||(17330243-17330342)
chr2 (180-282)||(24459459-24459561)
chr2 (168-278)||(31090176-31090286)
chr2 (144-282)||(39015013-39015151)
chr2 (168-282)||(24458068-24458182)
chr2 (168-282)||(32764946-32765060)
chr2 (48-282)||(34582551-34582785)
chr2 (168-248)||(14704048-14704128)
chr2 (43-293)||(14887374-14887626)
chr2 (168-282)||(39016384-39016496)
chr2 (169-254)||(7073675-7073760)
chr2 (187-282)||(5915012-5915107)
chr2 (327-398)||(7888572-7888643)
chr2 (66-260)||(7412122-7412316)
chr2 (180-281)||(38985002-38985103)
chr2 (335-411)||(10824259-10824334)
chr2 (54-282)||(38853763-38853991)
chr2 (55-201)||(26585167-26585310)
chr2 (81-296)||(12746115-12746332)
chr2 (337-429)||(803889-803980)
chr2 (146-238)||(17466093-17466185)
chr2 (181-263)||(2911505-2911587)
chr2 (116-259)||(15441920-15442063)
chr2 (43-119)||(24458211-24458287)
chr2 (1-45)||(32765257-32765301)
chr2 (168-239)||(26586296-26586367)
chr2 (180-239)||(31814357-31814416)
chr2 (181-271)||(21732131-21732216)
chr2 (1-45)||(2910420-2910464)
chr2 (182-270)||(5914324-5914412)
chr2 (63-135)||(18676719-18676791)
chr2 (63-111)||(21732274-21732322)
chr2 (1-45)||(24459214-24459258)
chr2 (1-45)||(32766040-32766084)
chr2 (48-119)||(17330120-17330191)
chr2 (48-119)||(32765088-32765159)
chr2 (48-119)||(43380738-43380809)
chr2 (327-373)||(445602-445648)
chr2 (180-282)||(8420021-8420123)
chr2 (180-258)||(33161799-33161877)
chr2 (48-203)||(37607189-37607344)
chr2 (54-135)||(38854944-38855025)
chr2 (1-45)||(2911248-2911291)
chr2 (327-411)||(6975837-6975919)
chr2 (1-37)||(18675452-18675488)
chr2 (1-45)||(24458380-24458424)
chr2 (1-45)||(31091287-31091331)
chr2 (48-104)||(31442517-31442573)
chr2 (171-282)||(33163462-33163574)
chr2 (1-37)||(38855960-38855996)
chr2 (1-45)||(39256773-39256817)
chr2 (48-119)||(14704156-14704227)
chr2 (63-110)||(31090317-31090364)
chr2 (47-118)||(31443125-31443196)
chr2 (49-119)||(24459356-24459426)
chr2 (330-376)||(33726405-33726451)
chr2 (49-119)||(39015156-39015226)
chr2 (49-119)||(39016285-39016355)
chr2 (330-375)||(2239607-2239652)
chr2 (180-261)||(11985720-11985801)
[»] chr8 (57 HSPs)
chr8 (1-263)||(41754640-41754891)
chr8 (143-282)||(32898421-32898560)
chr8 (49-234)||(45476218-45476403)
chr8 (143-278)||(35177407-35177542)
chr8 (1-131)||(41754127-41754257)
chr8 (168-282)||(35178805-35178919)
chr8 (49-220)||(45476445-45476616)
chr8 (64-280)||(31074004-31074220)
chr8 (143-282)||(1952946-1953084)
chr8 (168-261)||(5965443-5965536)
chr8 (48-282)||(5737904-5738138)
chr8 (55-279)||(33314872-33315093)
chr8 (318-411)||(43819551-43819643)
chr8 (291-409)||(7207194-7207310)
chr8 (327-429)||(24066973-24067074)
chr8 (68-282)||(30134574-30134788)
chr8 (191-282)||(41754006-41754097)
chr8 (48-238)||(28524810-28525000)
chr8 (145-282)||(10407562-10407699)
chr8 (335-429)||(617525-617617)
chr8 (335-429)||(623918-624010)
chr8 (61-251)||(28619028-28619219)
chr8 (327-429)||(42542994-42543095)
chr8 (1-72)||(41754568-41754639)
chr8 (176-242)||(28619554-28619620)
chr8 (187-263)||(1951970-1952045)
chr8 (1-45)||(10406510-10406554)
chr8 (56-258)||(24198966-24199164)
chr8 (342-429)||(589913-589998)
chr8 (145-253)||(5736879-5736987)
chr8 (54-242)||(12637648-12637833)
chr8 (48-270)||(31075172-31075392)
chr8 (55-135)||(9626349-9626429)
chr8 (218-274)||(28005359-28005415)
chr8 (218-274)||(28062662-28062718)
chr8 (1-37)||(28526306-28526342)
chr8 (1-45)||(30134855-30134899)
chr8 (1-45)||(32898204-32898248)
chr8 (43-119)||(32898341-32898417)
chr8 (143-227)||(10406269-10406353)
chr8 (72-135)||(39138569-39138632)
chr8 (49-119)||(1952872-1952942)
chr8 (319-365)||(12221022-12221068)
chr8 (1-43)||(28006335-28006377)
chr8 (1-43)||(28063638-28063680)
chr8 (185-239)||(41121160-41121214)
chr8 (218-292)||(59548-59624)
chr8 (329-429)||(27737704-27737803)
chr8 (63-135)||(28006492-28006564)
chr8 (63-135)||(28063795-28063867)
chr8 (1-37)||(31074363-31074399)
chr8 (1-37)||(35177721-35177757)
chr8 (329-368)||(8210174-8210213)
chr8 (330-376)||(4308834-4308880)
chr8 (49-127)||(36032869-36032947)
chr8 (168-261)||(8569437-8569530)
chr8 (43-100)||(9625380-9625437)
[»] chr3 (66 HSPs)
chr3 (82-282)||(3671047-3671246)
chr3 (168-282)||(17700526-17700640)
chr3 (180-282)||(48572993-48573095)
chr3 (168-282)||(17701920-17702034)
chr3 (168-282)||(36278960-36279074)
chr3 (168-282)||(52318318-52318432)
chr3 (169-258)||(11773053-11773142)
chr3 (145-282)||(55388081-55388218)
chr3 (126-282)||(50753825-50753981)
chr3 (180-282)||(2591635-2591737)
chr3 (180-282)||(45600952-45601053)
chr3 (168-282)||(47118052-47118166)
chr3 (48-258)||(36827356-36827566)
chr3 (48-281)||(20464078-20464311)
chr3 (143-251)||(36280293-36280401)
chr3 (180-282)||(2592020-2592122)
chr3 (168-282)||(19114541-19114655)
chr3 (317-429)||(21814202-21814312)
chr3 (183-282)||(34263813-34263912)
chr3 (180-282)||(33428448-33428550)
chr3 (143-254)||(53959076-53959187)
chr3 (329-429)||(15502622-15502721)
chr3 (168-282)||(47075352-47075466)
chr3 (180-282)||(55389482-55389584)
chr3 (144-282)||(52316987-52317125)
chr3 (330-429)||(41998907-41999005)
chr3 (333-411)||(1165784-1165861)
chr3 (180-242)||(48574472-48574534)
chr3 (169-253)||(49261539-49261620)
chr3 (62-159)||(3694035-3694132)
chr3 (180-276)||(48808380-48808476)
chr3 (329-411)||(15005830-15005911)
chr3 (180-282)||(19115160-19115261)
chr3 (317-414)||(3084012-3084107)
chr3 (330-429)||(34060751-34060850)
chr3 (215-281)||(19331117-19331183)
chr3 (195-282)||(53957683-53957769)
chr3 (191-265)||(47427885-47427959)
chr3 (49-119)||(55389371-55389441)
chr3 (1-45)||(17700838-17700882)
chr3 (1-45)||(17701687-17701731)
chr3 (1-45)||(36279264-36279308)
chr3 (54-278)||(40205893-40206118)
chr3 (179-282)||(47428575-47428672)
chr3 (1-45)||(48573307-48573351)
chr3 (48-118)||(55388211-55388281)
chr3 (47-119)||(2591776-2591848)
chr3 (63-119)||(17700670-17700726)
chr3 (63-119)||(36279103-36279159)
chr3 (1-45)||(36280077-36280121)
chr3 (1-37)||(48574218-48574254)
chr3 (1-45)||(55389229-55389273)
chr3 (329-411)||(21195283-21195364)
chr3 (181-251)||(33427791-33427860)
chr3 (49-119)||(48808523-48808593)
chr3 (48-113)||(19114670-19114735)
chr3 (168-253)||(39497244-39497329)
chr3 (1-45)||(48808682-48808726)
chr3 (1-37)||(48809416-48809452)
chr3 (1-33)||(53958862-53958894)
chr3 (1-45)||(55388381-55388425)
chr3 (332-399)||(54143822-54143889)
chr3 (334-388)||(22455369-22455423)
chr3 (49-119)||(48573136-48573206)
chr3 (180-210)||(48809667-48809697)
chr3 (327-376)||(28954253-28954302)
[»] chr1 (51 HSPs)
chr1 (141-274)||(7945528-7945661)
chr1 (143-282)||(32665746-32665885)
chr1 (168-278)||(5782426-5782536)
chr1 (143-279)||(9339657-9339793)
chr1 (143-263)||(10333162-10333282)
chr1 (67-282)||(8975167-8975382)
chr1 (48-282)||(6612427-6612652)
chr1 (168-251)||(9341026-9341109)
chr1 (179-270)||(52440571-52440662)
chr1 (180-282)||(10332994-10333096)
chr1 (168-282)||(22856688-22856802)
chr1 (327-411)||(51046645-51046728)
chr1 (180-263)||(5783122-5783205)
chr1 (1-129)||(534383-534510)
chr1 (180-276)||(7944169-7944265)
chr1 (145-282)||(52439487-52439620)
chr1 (329-398)||(32268033-32268102)
chr1 (180-239)||(6613992-6614051)
chr1 (55-239)||(50107091-50107275)
chr1 (317-409)||(13925101-13925191)
chr1 (179-280)||(1001164-1001265)
chr1 (48-282)||(11060666-11060899)
chr1 (48-282)||(44719358-44719592)
chr1 (182-278)||(3117661-3117757)
chr1 (1-45)||(9340800-9340844)
chr1 (188-280)||(44019996-44020088)
chr1 (1-72)||(534311-534382)
chr1 (81-280)||(51450011-51450209)
chr1 (335-412)||(1107386-1107462)
chr1 (181-242)||(25037926-25037987)
chr1 (181-242)||(25043138-25043199)
chr1 (183-263)||(534574-534653)
chr1 (335-429)||(39421026-39421126)
chr1 (1-42)||(32664824-32664865)
chr1 (1-45)||(7945334-7945378)
chr1 (63-119)||(9340941-9340997)
chr1 (317-365)||(12173173-12173221)
chr1 (2-45)||(25038197-25038240)
chr1 (2-45)||(25043409-25043452)
chr1 (107-195)||(33342511-33342599)
chr1 (183-230)||(34088485-34088532)
chr1 (291-365)||(46289632-46289705)
chr1 (337-397)||(3894800-3894861)
chr1 (48-112)||(9339804-9339868)
chr1 (55-135)||(11059771-11059851)
chr1 (63-119)||(32665686-32665742)
chr1 (5-45)||(52439781-52439821)
chr1 (362-429)||(46289579-46289645)
chr1 (329-375)||(27210749-27210795)
chr1 (330-392)||(41898878-41898940)
chr1 (48-101)||(16249832-16249885)
[»] chr4 (46 HSPs)
chr4 (180-282)||(53771062-53771164)
chr4 (49-282)||(26172822-26173057)
chr4 (180-282)||(47878497-47878599)
chr4 (144-282)||(42278057-42278195)
chr4 (180-293)||(47874559-47874674)
chr4 (171-282)||(31844730-31844841)
chr4 (168-282)||(53770341-53770455)
chr4 (145-280)||(39868932-39869065)
chr4 (54-274)||(21623004-21623224)
chr4 (176-282)||(4703226-4703332)
chr4 (168-282)||(48740021-48740135)
chr4 (97-278)||(26170652-26170833)
chr4 (183-263)||(54574452-54574532)
chr4 (317-412)||(4867772-4867866)
chr4 (48-230)||(19050298-19050478)
chr4 (176-278)||(26685431-26685528)
chr4 (327-412)||(45674164-45674248)
chr4 (63-242)||(21621871-21622050)
chr4 (168-282)||(39870675-39870789)
chr4 (189-282)||(19051253-19051346)
chr4 (55-240)||(6039171-6039356)
chr4 (145-242)||(50694797-50694894)
chr4 (184-238)||(54574822-54574876)
chr4 (69-239)||(31844866-31845027)
chr4 (212-293)||(42391933-42392016)
chr4 (1-45)||(54574744-54574788)
chr4 (63-261)||(4701794-4701990)
chr4 (1-46)||(19051117-19051162)
chr4 (327-384)||(45683989-45684046)
chr4 (48-135)||(32244429-32244516)
chr4 (48-119)||(42278200-42278271)
chr4 (203-278)||(44158516-44158591)
chr4 (89-135)||(32244610-32244656)
chr4 (1-43)||(42278763-42278805)
chr4 (49-119)||(47878386-47878456)
chr4 (63-119)||(20599802-20599858)
chr4 (1-37)||(21622192-21622228)
chr4 (48-119)||(47874714-47874785)
chr4 (2-45)||(47874875-47874918)
chr4 (343-429)||(29722067-29722152)
chr4 (291-365)||(35911151-35911224)
chr4 (63-113)||(42391802-42391852)
chr4 (181-238)||(2786273-2786330)
chr4 (1-38)||(24745793-24745830)
chr4 (169-230)||(25810415-25810476)
chr4 (329-410)||(45257608-45257688)
[»] scaffold0034 (1 HSPs)
scaffold0034 (180-282)||(116063-116165)
[»] scaffold0039 (3 HSPs)
scaffold0039 (49-278)||(79085-79314)
scaffold0039 (168-282)||(79684-79798)
scaffold0039 (185-278)||(74331-74424)
[»] scaffold0045 (2 HSPs)
scaffold0045 (329-410)||(62583-62663)
scaffold0045 (329-410)||(69915-69995)
[»] scaffold0767 (2 HSPs)
scaffold0767 (168-282)||(5607-5721)
scaffold0767 (181-278)||(6264-6361)
[»] scaffold0169 (1 HSPs)
scaffold0169 (329-397)||(9025-9093)
[»] scaffold0209 (1 HSPs)
scaffold0209 (335-429)||(29349-29441)
[»] scaffold0237 (2 HSPs)
scaffold0237 (47-131)||(3106-3190)
scaffold0237 (47-132)||(1843-1928)
[»] scaffold0369 (1 HSPs)
scaffold0369 (168-232)||(9137-9201)
[»] scaffold0016 (1 HSPs)
scaffold0016 (218-293)||(36574-36650)


Alignment Details
Target: chr6 (Bit Score: 137; Significance: 4e-71; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 137; E-Value: 4e-71
Query Start/End: Original strand, 9 - 282
Target Start/End: Complemental strand, 30748271 - 30748007
Alignment:
Q  9 agtaagtatgcacagtcagggacctaacagtaagttgaagatatcgattttcgattcagggaccaaagtggccattttcgactttcactttagtccccgt 108  Q
    ||||||||| |||||||||||| |||||||||| |||| ||||| |||||| ||||||||||||||| || |||||||  ||||||||||||||||| ||    
T  30748271 agtaagtatacacagtcagggatctaacagtaaattgaggatattgatttttgattcagggaccaaattgaccattttttactttcactttagtccctgt 30748172  T
Q  109 gacacgtcatactccttgtcagcataagccaagtgccacatcatcacttaacnnnnnnntttaacgacagagactaaagtgataacggaagtgcagagtc 208  Q
    |||||||||||||||||||||||         |||||||||||||||||||        ||||||| ||| |||||||||||||||| ||||| ||||||    
T  30748171 gacacgtcatactccttgtcagc---------gtgccacatcatcacttaatagttttttttaacggcagcgactaaagtgataacgaaagtgtagagtc 30748081  T
Q  209 agagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagtga 282  Q
    |||||||| ||||||||||||||| ||||||||| |||||||||||||||||||| | ||||||||||||||||    
T  30748080 agagacttgtttgtatttaatcctaagtcagggacctatgtgacagcgaggtgcagaatcagggactaaagtga 30748007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 168 - 282
Target Start/End: Original strand, 31219161 - 31219275
Alignment:
Q  168 tttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagt 267  Q
    ||||||| ||||||||||||||||||||||||||  |||||||  |||| ||||||||||||||||||| |  || |||||||||||||||||||| |||    
T  31219161 tttaacgtcagagactaaagtgataacggaagtgtcgagtcaggaacttctttgtatttaatcctgagttaatgacctatgtgacagcgaggtgcagagt 31219260  T
Q  268 cagggactaaagtga 282  Q
    |||||| ||||||||    
T  31219261 cagggattaaagtga 31219275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 183 - 282
Target Start/End: Complemental strand, 31219062 - 31218963
Alignment:
Q  183 taaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagtga 282  Q
    ||||||||||||||||||||||||||||  |||| ||||||||||||||||||| | ||| |||||||||||||||||||| |||||| || ||||||||    
T  31219062 taaagtgataacggaagtgcagagtcaggaacttctttgtatttaatcctgagttaaggacctatgtgacagcgaggtgcagagtcagagattaaagtga 31218963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 317 - 429
Target Start/End: Original strand, 1947417 - 1947528
Alignment:
Q  317 ggaaattattactttttaacttttagaaagttgaattcaacatttttcaccatttttcaagaaattatttctatttatgttcctcttaaccaatgcacaa 416  Q
    ||||||||  ||||||| ||||||||||||||||||| |||| |||| |||||||| ||| |||||||||||||||||||| ||||||||||||||   |    
T  1947417 ggaaattacaactttttgacttttagaaagttgaatttaacactttttaccattttccaacaaattatttctatttatgtt-ctcttaaccaatgcctca 1947515  T
Q  417 aggacactcttta 429  Q
    || ||||||||||    
T  1947516 agaacactcttta 1947528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 318 - 429
Target Start/End: Complemental strand, 16441885 - 16441775
Alignment:
Q  318 gaaattattactttttaacttttagaaagttgaattcaacatttttcaccatttttcaagaaattatttctatttatgttcctcttaaccaatgcacaaa 417  Q
    |||||||  ||||||| ||||||||||| |||||||||||||||||||||| ||||||| ||||||||| ||||||| || || ||||||||||  ||||    
T  16441885 gaaattacaacttttttacttttagaaatttgaattcaacatttttcaccacttttcaacaaattatttatatttatatt-cttttaaccaatgtccaaa 16441787  T
Q  418 ggacactcttta 429  Q
    | ||||||||||    
T  16441786 gaacactcttta 16441775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 9 - 72
Target Start/End: Complemental strand, 30748343 - 30748280
Alignment:
Q  9 agtaagtatgcacagtcagggacctaacagtaagttgaagatatcgattttcgattcagggacc 72  Q
    ||||||||| |||||||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  30748343 agtaagtatacacagtcagggacctaacagtaagttgaggatattgattttcgattcagggacc 30748280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 168 - 282
Target Start/End: Complemental strand, 23508070 - 23507957
Alignment:
Q  168 tttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagt 267  Q
    ||||||||||| |||||||||||||| ||||||| | ||||| ||| || ||||||||||||||||| ||||| | ||||||||||| |||||| | ||     
T  23508070 tttaacgacagggactaaagtgataaaggaagtgtaaagtcatagatttgtttgtatttaatcctgaatcaggaacctatgtgacagggaggtgtagag- 23507972  T
Q  268 cagggactaaagtga 282  Q
    ||| |||||||||||    
T  23507971 cagagactaaagtga 23507957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 335 - 398
Target Start/End: Original strand, 19646027 - 19646090
Alignment:
Q  335 acttttagaaagttgaattcaacatttttcaccatttttcaagaaattatttctatttatgttc 398  Q
    ||||||| |||||||||||||||| ||||||||||||||||| ||||| |||||||||||||||    
T  19646027 acttttaaaaagttgaattcaacacttttcaccatttttcaacaaattttttctatttatgttc 19646090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 131
Target Start/End: Complemental strand, 29856988 - 29856904
Alignment:
Q  47 agatatcgattttcgattcagggaccaaagtggccattttcgactttcactttagtccccgtgacacgtcatactccttgtcagc 131  Q
    |||||| |||||||||||||| ||||||| || |||||||| |||| ||||||| |||  ||||||| |||| | ||||||||||    
T  29856988 agatattgattttcgattcagagaccaaaatgaccattttctacttccactttaatccttgtgacacctcatgcaccttgtcagc 29856904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 270
Target Start/End: Original strand, 12676479 - 12676573
Alignment:
Q  176 cagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcag 270  Q
    ||||||||||| |||||||  ||||||| | | |||||||  |||||||||||||||||| ||| || |  ||||||| ||||||||| ||||||    
T  12676479 cagagactaaactgataacaaaagtgcacatttagagactactttgtatttaatcctgagacagagaccattgtgacaacgaggtgcagagtcag 12676573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 55 - 129
Target Start/End: Original strand, 19600133 - 19600206
Alignment:
Q  55 attttcgattcagggaccaaagtggccattttcgactttcactttagtccccgtgacacgtcatactccttgtca 129  Q
    |||||||||| ||| ||||||||| |||||||| ||||||||||||||||| ||||||  |||| | ||||||||    
T  19600133 attttcgatttagg-accaaagtgaccattttctactttcactttagtccctgtgacatttcatgcaccttgtca 19600206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 197 - 257
Target Start/End: Original strand, 6468811 - 6468871
Alignment:
Q  197 aagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcga 257  Q
    ||||||| | |||||||||  ||||||||||||| ||||||||||| || |||||||||||    
T  6468811 aagtgcacattcagagactattttgtatttaatcatgagtcagggacctttgtgacagcga 6468871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 335 - 398
Target Start/End: Original strand, 5138503 - 5138565
Alignment:
Q  335 acttttagaaagttgaattcaacatttttcaccatttttcaagaaattatttctatttatgttc 398  Q
    ||||||||||| |||||||||||||||||||  |||||| || ||| ||||| |||||||||||    
T  5138503 acttttagaaatttgaattcaacatttttca-tattttttaataaaatatttgtatttatgttc 5138565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 335 - 429
Target Start/End: Complemental strand, 27127586 - 27127493
Alignment:
Q  335 acttttagaaagttgaattcaacatttttcaccatttttcaagaaattatttctatttatgttcctcttaaccaatgcacaaaggacactcttta 429  Q
    ||||||| |||||| |||||| ||||||||||||||| |||| | | ||||||||||| |  || |||||| |||||||  | ||||||||||||    
T  27127586 acttttaaaaagttaaattcatcatttttcaccatttctcaatacaatatttctattt-ttatcatcttaaacaatgcatcatggacactcttta 27127493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 132
Target Start/End: Complemental strand, 29845723 - 29845638
Alignment:
Q  47 agatatcgattttcgattcagggaccaaagtggccattttcgactttcactttagtccccgtgacacgtcatactccttgtcagca 132  Q
    |||||| |||||||||||||| ||||||| || | |||||| |||| ||||||||| |  | ||||| |||| | |||||||||||    
T  29845723 agatattgattttcgattcagagaccaaaatgactattttctacttccactttagttcttgcgacacctcatgcaccttgtcagca 29845638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 99; Significance: 2e-48; HSPs: 67)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 1 - 252
Target Start/End: Original strand, 19186064 - 19186305
Alignment:
Q  1 taactgatagtaagtatgcacagtcagggacctaacagtaagttgaagatatcgattttcgattcagggaccaaagtggccattttcgactttcacttta 100  Q
    ||||||||||||||||| |||||||||||| |||||| ||| |||| || || |||||| ||| |||| ||||||||| | |||||  |||||||||||     
T  19186064 taactgatagtaagtatacacagtcagggatctaacaataaattgaggacattgatttttgatgcagg-accaaagtgactattttttactttcactttt 19186162  T
Q  101 gtccccgtgacacgtcatactccttgtcagcataagccaagtgccacatcatcacttaacnnnnnnntttaacgacagagactaaagtgataacggaagt 200  Q
    ||||| |||||||||||||||||||||||||         ||||||||||||| ||||||       ||||||||||  ||||||||||||||||||| |    
T  19186163 gtccctgtgacacgtcatactccttgtcagc---------gtgccacatcatcgcttaacagattgttttaacgacaaggactaaagtgataacggaaat 19186253  T
Q  201 gcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgac 252  Q
    | |||||||||||||| ||||||||||||||| ||||||||| |||||||||    
T  19186254 gtagagtcagagacttgtttgtatttaatcctaagtcagggacctatgtgac 19186305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 40 - 282
Target Start/End: Complemental strand, 21069538 - 21069297
Alignment:
Q  40 aagttgaagatatcgattttcgattcagggaccaaagtggccattttcgactttcactttagtccccgtgacacgtcatactccttgtcagcataagcca 139  Q
    |||||||  |||| |||||||  |||||||| |||| || |||||||| |||||||||||| |||   |||||||||||||||||||||| |||||| ||    
T  21069538 aagttgagaatattgattttcagttcagggatcaaa-tgaccattttctactttcactttaatccatatgacacgtcatactccttgtcaacataagtca 21069440  T
Q  140 agtgccacatcatcacttaacnnnnnnntttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcag 239  Q
     ||||||||||||||||||||       ||||||| || | | |||||||| ||| ||||||||||||||  ||||||||||||||||||||||||||||    
T  21069439 tgtgccacatcatcacttaacaaaattttttaacggcatatattaaagtgaaaacagaagtgcagagtcaaggacttatttgtatttaatcctgagtcag 21069340  T
Q  240 ggatctatgtgacagcgaggtgcacagtcagggactaaagtga 282  Q
     || || ||||||| ||||||||| |||||| |||||||||||    
T  21069339 agacctctgtgacaacgaggtgcagagtcagagactaaagtga 21069297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 9 - 269
Target Start/End: Complemental strand, 19183221 - 19182971
Alignment:
Q  9 agtaagtatgcacagtcagggacctaacagtaagttgaagatatcgattttcgattcagggaccaaagtggccattttcgactttcactttagtccccgt 108  Q
    ||||||||| |||||| ||||| |||||||||| |||| ||||| |||||||||||||| || ||||||  |||||||  ||||||||||||||||   |    
T  19183221 agtaagtatacacagt-agggatctaacagtaaattgaggatattgattttcgattcagagagcaaagtcaccattttttactttcactttagtccatat 19183123  T
Q  109 gacacgtcatactccttgtcagcataagccaagtgccacatcatcacttaacnnnnnnntttaacgacagagactaaagtgataacggaagtgcagagtc 208  Q
    ||||||||||||||||||| |||         ||||||||||||||||||||       |||||   ||  |||||||||||||||||||||| ||||||    
T  19183122 gacacgtcatactccttgttagc---------gtgccacatcatcacttaacatatttttttaatcgcaaggactaaagtgataacggaagtgtagagtc 19183032  T
Q  209 agagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtca 269  Q
    ||  ||||||||||||||||||||||||||| || |||||||||||||||||||| |||||    
T  19183031 aggaacttatttgtatttaatcctgagtcagagacctatgtgacagcgaggtgcaaagtca 19182971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 13650995 - 13651159
Alignment:
Q  1 taactgatagtaagtatgcacagtcagggacctaacagtaagttgaagatatcgattttcgattcagggaccaaagtggccattttcgactttcacttta 100  Q
    ||||| |||||||||||||| ||||||||||||||||||||||||  ||||| |||||||| ||||||||| |||||| |||||||  ||||||||||||    
T  13650995 taactaatagtaagtatgcatagtcagggacctaacagtaagttgcggatattgattttcggttcagggactaaagtgaccattttttactttcacttta 13651094  T
Q  101 gtccccgtga-----cacgtcatactccttgtcagcataagccaagtgccacatcatcacttaac 160  Q
    ||||| ||||     ||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  13651095 gtccctgtgacatgtcacgtcatactccttgtcagcataagccatgcgccacatcatcacttaac 13651159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 48 - 280
Target Start/End: Complemental strand, 9537264 - 9537033
Alignment:
Q  48 gatatcgattttcgattcagggaccaaagtggccattttcgactttcactttagtccccgtgacacgtcatactccttgtcagcataagccaagtgccac 147  Q
    ||||| |||||| |||||||||| ||||||| | |||||| ||||||||||||||| | ||||||| |||||   ||||||  | |||  || |||||||    
T  9537264 gatattgatttttgattcagggatcaaagtgactattttctactttcactttagtcactgtgacacatcatatgacttgtcgtcgtaaaacatgtgccac 9537165  T
Q  148 atcatcacttaacnnnnnnntttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctat 247  Q
    ||||||||||| |       ||||||| ||| |||||||||||||| ||||||||| |||||  ||||| |||||||||||| || |||||| || ||||    
T  9537164 atcatcacttaccataattatttaacgtcagtgactaaagtgataatggaagtgcacagtcat-gacttctttgtatttaattctaagtcagagacctat 9537066  T
Q  248 gtgacagcgaggtgcacagtcagggactaaagt 280  Q
    |||||||||||||||| ||| ||||||||||||    
T  9537065 gtgacagcgaggtgcagagtgagggactaaagt 9537033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 143 - 282
Target Start/End: Complemental strand, 4593008 - 4592869
Alignment:
Q  143 gccacatcatcacttaacnnnnnnntttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcaggga 242  Q
    ||||||||||||||||||       ||||||| ||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  4593008 gccacatcatcacttaacagatttttttaacgtcagggactaaagtgataacggaagtgcagagtcagggacttatttgtatttaatcttgagtcaggga 4592909  T
Q  243 tctatgtgacagcgaggtgcacagtcagggactaaagtga 282  Q
      |||||||||||||| | || | ||||||||||||||||    
T  4592908 cttatgtgacagcgagctacataatcagggactaaagtga 4592869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 168 - 282
Target Start/End: Complemental strand, 8074573 - 8074459
Alignment:
Q  168 tttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagt 267  Q
    ||||||| |||  |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||  |||||||||||||| |||| | |    
T  8074573 tttaacgtcaggaactaaagtgataacggaagtgcagagtcagggacttatttgtatttaatcctgagtcagggacttatgtgacagcgagctgcataat 8074474  T
Q  268 cagggactaaagtga 282  Q
    |||||||||||||||    
T  8074473 cagggactaaagtga 8074459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 1 - 282
Target Start/End: Original strand, 31946887 - 31947152
Alignment:
Q  1 taactgatagtaagtatgcacagtcagggacctaacagtaagttgaagatatcgattttcgattcagggaccaaagtggccattttcgactttcacttta 100  Q
    ||||||| ||||||||| |||||||||||| |||||||||| |||  ||||| ||||||||||||||||||||||||| |||||||  ||||||||||||    
T  31946887 taactgacagtaagtatacacagtcagggatctaacagtaaattgtggatattgattttcgattcagggaccaaagtgaccattttttactttcacttta 31946986  T
Q  101 gtccccgtgacacgtcatactccttgtcagcataagccaagtgccacatcatcacttaacnnnnnnntttaacgacagagactaaagtgataacggaagt 200  Q
    |||       ||||| |||||| ||||||||         ||||||||||||||||||||       ||||||  ||| |||||||||||||||||||||    
T  31946987 gtc-------cacgtaatactcattgtcagc---------gtgccacatcatcacttaacatatttttttaacagcagtgactaaagtgataacggaagt 31947070  T
Q  201 gcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagtga 282  Q
      ||||||| |||||| ||||||||||||  | ||| ||| |||||| ||||| | | ||||| | |||| |||||||||||    
T  31947071 ctagagtcatagacttgtttgtatttaattttaagtaaggaatctatatgacaacaaagtgcagaatcagagactaaagtga 31947152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 61 - 282
Target Start/End: Original strand, 9537943 - 9538164
Alignment:
Q  61 gattcagggaccaaagtggccattttcgactttcactttagtccccgtgacacgtcatactccttgtcagcataagccaagtgccacatcatcacttaac 160  Q
    |||||||||||||||||| |||||||  ||||||||||||||||  |||| || |||||   | | ||| | |||  || ||| ||||| ||||||||||    
T  9537943 gattcagggaccaaagtgaccattttatactttcactttagtccatgtgaaacatcatatgtcatatcatcgtaaaacatgtgtcacataatcacttaac 9538042  T
Q  161 nnnnnnntttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggt 260  Q
           ||||||  ||||||||||| |||||||||||||||| | |||||||||| ||||||||||||||||||||||||| |||| ||||| |||| |    
T  9538043 ataattatttaacatcagagactaaaatgataacggaagtgcacaatcagagacttctttgtatttaatcctgagtcagggacctatatgacaacgagat 9538142  T
Q  261 gcacagtcagggactaaagtga 282  Q
    ||| |||||||||| |||||||    
T  9538143 gcagagtcagggaccaaagtga 9538164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 143 - 270
Target Start/End: Complemental strand, 25590577 - 25590451
Alignment:
Q  143 gccacatcatcacttaacnnnnnnntttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcaggga 242  Q
    ||||||||||||||||||       ||||||| |||||| |||||||||||| |||||||||| ||||||||||||||||||||||||| ||||||||||    
T  25590577 gccacatcatcacttaacaaaattttttaacgtcagagattaaagtgataacagaagtgcagaatcagagacttatttgtatttaatcc-gagtcaggga 25590479  T
Q  243 tctatgtgacagcgaggtgcacagtcag 270  Q
     |||||||||||||||||||| ||||||    
T  25590478 cctatgtgacagcgaggtgcagagtcag 25590451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 180 - 282
Target Start/End: Original strand, 28591127 - 28591229
Alignment:
Q  180 gactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaag 279  Q
    |||||||||||||| |||||||||||||||| || |||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||  ||||    
T  28591127 gactaaagtgataaaggaagtgcagagtcagggatttatttgtatttaatcctgagtcagggacctatgtgacagcgaggtgcagagtcagggatcaaag 28591226  T
Q  280 tga 282  Q
    |||    
T  28591227 tga 28591229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 168 - 282
Target Start/End: Original strand, 546037 - 546150
Alignment:
Q  168 tttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagt 267  Q
    ||||||| ||| ||||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||| ||||||||||||||| |||| | |    
T  546037 tttaacgtcagggactaaagtgataacggaagtgcagagtcaaggacttatctgtatttaatcctgagtcagggacctatgtgacagcgagctgcaaaat 546136  T
Q  268 cagggactaaagtga 282  Q
    | |||||||||||||    
T  546137 c-gggactaaagtga 546150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 143 - 282
Target Start/End: Complemental strand, 2464816 - 2464677
Alignment:
Q  143 gccacatcatcacttaacnnnnnnntttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcaggga 242  Q
    ||||||||||||||||||       ||||||| |||||||||||||||||||| ||||||||||| || ||||||||||||||||||| ||||||| |||    
T  2464816 gccacatcatcacttaacaaatttttttaacgtcagagactaaagtgataacgtaagtgcagagttagggacttatttgtatttaatcatgagtcatgga 2464717  T
Q  243 tctatgtgacagcgaggtgcacagtcagggactaaagtga 282  Q
     |||| |||||||||| |||| | |||| |||||||||||    
T  2464716 cctatatgacagcgagctgcagaatcagtgactaaagtga 2464677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 168 - 282
Target Start/End: Complemental strand, 16611850 - 16611736
Alignment:
Q  168 tttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagt 267  Q
    ||||||| |||||||||||||||||||||||||||| | |||||| ||| |||||||||||||||||||||| || |||||||||||||||||| | |||    
T  16611850 tttaacgtcagagactaaagtgataacggaagtgcataatcagaggcttctttgtatttaatcctgagtcagagacctatgtgacagcgaggtgtagagt 16611751  T
Q  268 cagggactaaagtga 282  Q
    || | | ||||||||    
T  16611750 caagaattaaagtga 16611736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 143 - 282
Target Start/End: Original strand, 14891123 - 14891258
Alignment:
Q  143 gccacatcatcacttaacnnnnnnntttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcaggga 242  Q
    ||||||||||||||||||       ||||||| |||||||||||||||||||||||||| ||||||||||||    ||| |||||||| |||||||| ||    
T  14891123 gccacatcatcacttaacatatttttttaacgtcagagactaaagtgataacggaagtgtagagtcagagac----ttgcatttaatcatgagtcagaga 14891218  T
Q  243 tctatgtgacagcgaggtgcacagtcagggactaaagtga 282  Q
     |||||||||||||||||||| ||| |||||| |||||||    
T  14891219 cctatgtgacagcgaggtgcagagtgagggaccaaagtga 14891258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 168 - 282
Target Start/End: Original strand, 2466775 - 2466889
Alignment:
Q  168 tttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagt 267  Q
    ||||||| ||| |||||||||||||||||||||||||||| || ||||||||| ||||||||||||| |||  || |||||||| ||||||||||| |||    
T  2466775 tttaacgtcagggactaaagtgataacggaagtgcagagttagggacttatttttatttaatcctgaatcaatgacctatgtgatagcgaggtgcagagt 2466874  T
Q  268 cagggactaaagtga 282  Q
    ||| ||| |||||||    
T  2466875 cagagaccaaagtga 2466889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 744 - 834
Target Start/End: Complemental strand, 13649435 - 13649346
Alignment:
Q  744 tcgaccaggaatcttggcttatcccctttgtgttaccaaatctttcgattttacaaagaatgatgtcgatcagaagtctctgctcctcctc 834  Q
    |||||| |||||||||||||||||||||||||||||||||||||| ||||| |||||||||| |||| |||||||||||| ||| ||||||    
T  13649435 tcgaccgggaatcttggcttatcccctttgtgttaccaaatcttt-gatttcacaaagaatggtgtcaatcagaagtctcagcttctcctc 13649346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 196 - 282
Target Start/End: Complemental strand, 18400284 - 18400198
Alignment:
Q  196 gaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagtga 282  Q
    ||||||||||||||| ||||| ||| ||||||||||||||||| ||| ||||||||||| |||||||| ||||||||||||||||||    
T  18400284 gaagtgcagagtcagtgacttctttttatttaatcctgagtcaaggacctatgtgacagtgaggtgcagagtcagggactaaagtga 18400198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 145 - 269
Target Start/End: Original strand, 8075811 - 8075935
Alignment:
Q  145 cacatcatcacttaacnnnnnnntttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatc 244  Q
    ||||||||||||||||       || |||| ||| |||||||||||||||| ||||||||| ||||| |||| ||||||||||||| ||| |||||||||    
T  8075811 cacatcatcacttaacagattttttaaacgtcagggactaaagtgataacgaaagtgcagaatcagatacttttttgtatttaatcttgaatcagggatc 8075910  T
Q  245 tatgtgacagcgaggtgcacagtca 269  Q
    ||| | ||||||||||||| |||||    
T  8075911 tatctaacagcgaggtgcagagtca 8075935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 183 - 282
Target Start/End: Original strand, 40612675 - 40612774
Alignment:
Q  183 taaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagtga 282  Q
    ||||||||||||||||||||||||||||  |  ||| ||||||||||||||||||||||| ||| ||||||| ||| |||| | ||||||||||||||||    
T  40612675 taaagtgataacggaagtgcagagtcaggaaaatatctgtatttaatcctgagtcagggacctacgtgacagtgagctgcaaaatcagggactaaagtga 40612774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 143 - 258
Target Start/End: Original strand, 32641702 - 32641817
Alignment:
Q  143 gccacatcatcacttaacnnnnnnntttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcaggga 242  Q
    ||||||||||||||||||       ||||||| ||| || ||||||||||||||||||||||||||||  |||||||||||||||||| ||||| |||||    
T  32641702 gccacatcatcacttaacatatttttttaacgtcagggattaaagtgataacggaagtgcagagtcagcaacttatttgtatttaatcttgagtaaggga 32641801  T
Q  243 tctatgtgacagcgag 258  Q
     ||| |||||| ||||    
T  32641802 cctacgtgacaacgag 32641817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 145 - 263
Target Start/End: Complemental strand, 32640433 - 32640315
Alignment:
Q  145 cacatcatcacttaacnnnnnnntttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatc 244  Q
    ||||||||||||||||       ||||||| ||||||||||||||||||| |||||  ||||| || ||||||||||||||||||||||||| | ||  |    
T  32640433 cacatcatcacttaacaaatttttttaacgtcagagactaaagtgataacagaagtttagagttagggacttatttgtatttaatcctgagttatggtcc 32640334  T
Q  245 tatgtgacagcgaggtgca 263  Q
    |||||||||| ||||||||    
T  32640333 tatgtgacagtgaggtgca 32640315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 176 - 280
Target Start/End: Complemental strand, 18004752 - 18004648
Alignment:
Q  176 cagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggact 275  Q
    |||||||||||||||||||||||||||||||||| |||| | ||||||||||||||| ||  |  ||  | |||||||| |||||||| |||||||||||    
T  18004752 cagagactaaagtgataacggaagtgcagagtcatagacctctttgtatttaatcctaagctatagacttttgtgacagtgaggtgcagagtcagggact 18004653  T
Q  276 aaagt 280  Q
    |||||    
T  18004652 aaagt 18004648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 176 - 271
Target Start/End: Complemental strand, 544762 - 544668
Alignment:
Q  176 cagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagg 271  Q
    |||| |||||| | ||||||||||||||||||||| |||||||||||||||||||||||||||| || |||| ||||| ||| ||||| |||||||    
T  544762 cagaaactaaatttataacggaagtgcagagtcagtgacttatttgtatttaatcctgagtcagagacctatctgaca-cgaagtgcagagtcagg 544668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 19183299 - 19183229
Alignment:
Q  1 taactgatagtaagtatgcacagtcagggacctaacagtaagttgaagatatcgattttcgattcagggacc 72  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||| ||||| ||||||||||| |||||||    
T  19183299 taactgacagtaagtat-cacagtcagggacctaacagtaagttgatgatattgattttcgatttagggacc 19183229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 220 - 282
Target Start/End: Original strand, 13651173 - 13651234
Alignment:
Q  220 tgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagtga 282  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||||||| ||||||||||||    
T  13651173 tgtatttaatcctgagtcagggacctatgtgacagc-aggtgcacagtcaaggactaaagtga 13651234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 177 - 282
Target Start/End: Complemental strand, 16979105 - 16979000
Alignment:
Q  177 agagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggacta 276  Q
    |||||||||| |||||||| |||| |||||| || |||||||||| ||||||| ||||||||  || || |||| |||| ||||||| ||||| ||||||    
T  16979105 agagactaaaatgataacgtaagtacagagttagggacttatttgcatttaattctgagtcaatgacctttgtggcagcaaggtgcaaagtcaaggacta 16979006  T
Q  277 aagtga 282  Q
    ||||||    
T  16979005 aagtga 16979000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 185 - 244
Target Start/End: Original strand, 4594118 - 4594176
Alignment:
Q  185 aagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatc 244  Q
    ||||||||| |||||||||||||||  |||||||||||||||||||||||||||||||||    
T  4594118 aagtgataatggaagtgcagagtcat-gacttatttgtatttaatcctgagtcagggatc 4594176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 19185992 - 19186063
Alignment:
Q  1 taactgatagtaagtatgcacagtcagggacctaacagtaagttgaagatatcgattttcgattcagggacc 72  Q
    ||||||| ||||||||| || |||||| ||||||||||||||| || ||||| |||||||||||||||||||    
T  19185992 taactgacagtaagtatacaaagtcagagacctaacagtaagtagatgatattgattttcgattcagggacc 19186063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 177 - 282
Target Start/End: Complemental strand, 13483133 - 13483029
Alignment:
Q  177 agagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggacta 276  Q
    |||||| |||||||||||| ||||||||||| |||||||| ||| ||||||||| ||||||||| | |||| |||  ||||| | || |||| |||||||    
T  13483133 agagacaaaagtgataacgaaagtgcagagtaagagacttctttatatttaatcatgagtcaggaacctatctgaatgcgagatacagagtc-gggacta 13483035  T
Q  277 aagtga 282  Q
    ||||||    
T  13483034 aagtga 13483029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 54 - 135
Target Start/End: Original strand, 32555434 - 32555514
Alignment:
Q  54 gattttcgattcagggaccaaagtggccattttcgactttcactttagtccccgtgacacgtcatactccttgtcagcataa 135  Q
    |||||||| |||||| ||||| ||| | |||||| ||||||||||||||||  ||||||| |||||||||||||||||||||    
T  32555434 gattttcggttcaggaaccaa-gtgacaattttctactttcactttagtccatgtgacacctcatactccttgtcagcataa 32555514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 545010 - 544966
Alignment:
Q  1 taactgatagtaagtatgcacagtcagggacctaacagtaagttg 45  Q
    ||||||||||||||||||||||||||||||||||||| |||||||    
T  545010 taactgatagtaagtatgcacagtcagggacctaacaataagttg 544966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 4593218 - 4593174
Alignment:
Q  1 taactgatagtaagtatgcacagtcagggacctaacagtaagttg 45  Q
    |||||||||||||||||||||||||||||||||||||||| ||||    
T  4593218 taactgatagtaagtatgcacagtcagggacctaacagtatgttg 4593174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 40612418 - 40612462
Alignment:
Q  1 taactgatagtaagtatgcacagtcagggacctaacagtaagttg 45  Q
    |||||||||||||||||||||||||||||||||||||||| ||||    
T  40612418 taactgatagtaagtatgcacagtcagggacctaacagtaggttg 40612462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 545803 - 545842
Alignment:
Q  1 taactgatagtaagtatgcacagtcagggacctaacagta 40  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  545803 taactgatagtaagtatgcacagtcagggacctaacagta 545842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 48 - 119
Target Start/End: Complemental strand, 2464891 - 2464820
Alignment:
Q  48 gatatcgattttcgattcagggaccaaagtggccattttcgactttcactttagtccccgtgacacgtcata 119  Q
    ||||| |||||| | |||||||||||||||| |||||||| ||||||||||| ||||| ||||||| |||||    
T  2464891 gatattgatttttggttcagggaccaaagtgaccattttctactttcactttggtccctgtgacacctcata 2464820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 4593869 - 4593912
Alignment:
Q  1 taactgatagtaagtatgcacagtcagggacctaacagtaagtt 44  Q
    ||||||||||||||||||||||||||||||||||||| ||||||    
T  4593869 taactgatagtaagtatgcacagtcagggacctaacattaagtt 4593912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 181 - 227
Target Start/End: Complemental strand, 14881056 - 14881010
Alignment:
Q  181 actaaagtgataacggaagtgcagagtcagagacttatttgtattta 227  Q
    |||||||||||||||||||||||||||||| ||||||||||| ||||    
T  14881056 actaaagtgataacggaagtgcagagtcagggacttatttgtgttta 14881010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 143 - 250
Target Start/End: Complemental strand, 28589846 - 28589739
Alignment:
Q  143 gccacatcatcacttaacnnnnnnntttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcaggga 242  Q
    ||||||||||||||||||       ||||||| ||||||||||| || |||||||||| || ||||| | |  ||||||||||||||  |||||||||||    
T  28589846 gccacatcatcacttaacagatttttttaacgtcagagactaaaatggtaacggaagtacaaagtcaaaaatgtatttgtatttaattatgagtcaggga 28589747  T
Q  243 tctatgtg 250  Q
     |||||||    
T  28589746 cctatgtg 28589739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 2465033 - 2464989
Alignment:
Q  1 taactgatagtaagtatgcacagtcagggacctaacagtaagttg 45  Q
    ||||||||||||| |||||||||||||||||||||||||| ||||    
T  2465033 taactgatagtaaatatgcacagtcagggacctaacagtaggttg 2464989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 2466533 - 2466577
Alignment:
Q  1 taactgatagtaagtatgcacagtcagggacctaacagtaagttg 45  Q
    ||||||||||||||||||||||||||| ||||||||| |||||||    
T  2466533 taactgatagtaagtatgcacagtcagagacctaacaataagttg 2466577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 185 - 282
Target Start/End: Original strand, 13483174 - 13483275
Alignment:
Q  185 aagtgataacggaagtgcagagtcagagacttatttgtatttaat----cctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagt 280  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||    | |||||||  || ||| ||| |||||||||||| |||||  |||||| ||    
T  13483174 aagtgataacggaagtgcaaagtcagagacttgtttgtatttaattaatcatgagtcaaagacctacgtggcagcgaggtgcagagtcaaagactaacgt 13483273  T
Q  281 ga 282  Q
    ||    
T  13483274 ga 13483275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 14890922 - 14890966
Alignment:
Q  1 taactgatagtaagtatgcacagtcagggacctaacagtaagttg 45  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||    
T  14890922 taactgatagtaaatatgcacagtcagggacctaacaataagttg 14890966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 28590066 - 28590022
Alignment:
Q  1 taactgatagtaagtatgcacagtcagggacctaacagtaagttg 45  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||    
T  28590066 taactgatagtaagtatgcacagtcagagacctaacagtaggttg 28590022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 28590873 - 28590916
Alignment:
Q  1 taactgatagtaagtatgcacagtcagggacctaacagtaagttg 45  Q
    |||||||||||||||||||||||||||||| ||||||||||||||    
T  28590873 taactgatagtaagtatgcacagtcaggga-ctaacagtaagttg 28590916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 63 - 119
Target Start/End: Original strand, 28591029 - 28591085
Alignment:
Q  63 ttcagggaccaaagtggccattttcgactttcactttagtccccgtgacacgtcata 119  Q
    |||||||||||||||| |||||||| ||||||||||| ||||| ||||||| |||||    
T  28591029 ttcagggaccaaagtgaccattttctactttcactttggtccctgtgacacctcata 28591085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 32640651 - 32640607
Alignment:
Q  1 taactgatagtaagtatgcacagtcagggacctaacagtaagttg 45  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||    
T  32640651 taactgatagtaagtatgcacaatcaaggacctaacagtaagttg 32640607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 40611623 - 40611579
Alignment:
Q  1 taactgatagtaagtatgcacagtcagggacctaacagtaagttg 45  Q
    |||||||||||||||||| |||||||||||||||||| |||||||    
T  40611623 taactgatagtaagtatgtacagtcagggacctaacactaagttg 40611579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 327 - 394
Target Start/End: Original strand, 28782706 - 28782773
Alignment:
Q  327 actttttaacttttagaaagttgaattcaacatttttcaccatttttcaagaaattatttctatttat 394  Q
    ||||||| ||||||| || ||||||||||||| |||| || |||||| || |||||||||||||||||    
T  28782706 acttttttacttttaaaatgttgaattcaacactttttacaattttttaacaaattatttctatttat 28782773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 9 - 72
Target Start/End: Original strand, 31946823 - 31946886
Alignment:
Q  9 agtaagtatgcacagtcagggacctaacagtaagttgaagatatcgattttcgattcagggacc 72  Q
    ||||||||| || |||||| ||||||||| |||||||| ||||| ||||||||||||| |||||    
T  31946823 agtaagtatacagagtcagtgacctaacaataagttgatgatattgattttcgattcaaggacc 31946886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 49 - 119
Target Start/End: Complemental strand, 8074671 - 8074601
Alignment:
Q  49 atatcgattttcgattcagggaccaaagtggccattttcgactttcactttagtccccgtgacacgtcata 119  Q
    |||| |||||| | |||||||||||||||| |||||||| ||||||||||| || || ||||||| |||||    
T  8074671 atattgatttttggttcagggaccaaagtgaccattttctactttcactttggtacctgtgacacctcata 8074601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 49 - 119
Target Start/End: Original strand, 8075735 - 8075805
Alignment:
Q  49 atatcgattttcgattcagggaccaaagtggccattttcgactttcactttagtccccgtgacacgtcata 119  Q
    |||| |||||| | ||||||||||||||||  ||||||||||||||||||| ||||  ||||||| |||||    
T  8075735 atattgatttttggttcagggaccaaagtgatcattttcgactttcactttggtccttgtgacacctcata 8075805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 23773302 - 23773344
Alignment:
Q  1 taactgatagtaagtatgcacagtcagggacctaacagtaagt 43  Q
    ||||| ||||||||||||||||||||||||||||||| |||||    
T  23773302 taactaatagtaagtatgcacagtcagggacctaacaataagt 23773344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 49 - 119
Target Start/End: Complemental strand, 25590651 - 25590581
Alignment:
Q  49 atatcgattttcgattcagggaccaaagtggccattttcgactttcactttagtccccgtgacacgtcata 119  Q
    |||| |||||| | ||||| |||||||||| |||||||| ||||||||||| ||||| ||||||| |||||    
T  25590651 atattgatttttggttcagagaccaaagtgaccattttctactttcactttggtccctgtgacacctcata 25590581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 49 - 119
Target Start/End: Complemental strand, 40611481 - 40611411
Alignment:
Q  49 atatcgattttcgattcagggaccaaagtggccattttcgactttcactttagtccccgtgacacgtcata 119  Q
    |||| |||||| | |||||||||| ||||| |||||||| ||||||||||| ||||| ||||||| |||||    
T  40611481 atattgatttttggttcagggacccaagtgaccattttctactttcactttggtccctgtgacacctcata 40611411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 25590793 - 25590752
Alignment:
Q  1 taactgatagtaagtatgcacagtcagggacctaacagtaag 42  Q
    |||||||||||||||||||||||| |||||||||||| ||||    
T  25590793 taactgatagtaagtatgcacagttagggacctaacaataag 25590752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 49 - 105
Target Start/End: Complemental strand, 4593081 - 4593025
Alignment:
Q  49 atatcgattttcgattcagggaccaaagtggccattttcgactttcactttagtccc 105  Q
    |||| |||||| | |||||||||||||||| |||||||| ||||||||||| |||||    
T  4593081 atattgatttttggttcagggaccaaagtgaccattttctactttcactttggtccc 4593025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 8074814 - 8074770
Alignment:
Q  1 taactgatagtaagtatgcacagtcagggacctaacagtaagttg 45  Q
    ||||| |||||||||||||||||||||||| ||||||||| ||||    
T  8074814 taacttatagtaagtatgcacagtcagggagctaacagtaggttg 8074770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 9537395 - 9537355
Alignment:
Q  5 tgatagtaagtatgcacagtcagggacctaacagtaagttg 45  Q
    |||||||||||||||||||||| |||||||| |||||||||    
T  9537395 tgatagtaagtatgcacagtcaaggacctaatagtaagttg 9537355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 342 - 398
Target Start/End: Original strand, 10317259 - 10317315
Alignment:
Q  342 gaaagttgaattcaacatttttcaccatttttcaagaaattatttctatttatgttc 398  Q
    ||||||||||||||||| |||||| |||||||||| | ||| ||||||||| |||||    
T  10317259 gaaagttgaattcaacacttttcatcatttttcaacacattctttctatttttgttc 10317315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 49 - 113
Target Start/End: Complemental strand, 32640509 - 32640445
Alignment:
Q  49 atatcgattttcgattcagggaccaaagtggccattttcgactttcactttagtccccgtgacac 113  Q
    |||| |||||| | |||| ||||||||||| |||||||| ||||||||||| ||||| |||||||    
T  32640509 atattgatttttggttcaaggaccaaagtgaccattttctactttcactttggtccctgtgacac 32640445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 32641502 - 32641546
Alignment:
Q  1 taactgatagtaagtatgcacagtcagggacctaacagtaagttg 45  Q
    ||||||||| |||||||||||||| ||||||||||||||| ||||    
T  32641502 taactgataataagtatgcacagttagggacctaacagtaggttg 32641546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 49 - 119
Target Start/End: Complemental strand, 14889990 - 14889920
Alignment:
Q  49 atatcgattttcgattcagggaccaaagtggccattttcgactttcactttagtccccgtgacacgtcata 119  Q
    |||| |||||| | |||||||||||||||| |||||||| ||||| ||||| |||||  |||||| |||||    
T  14889990 atattgatttttggttcagggaccaaagtgaccattttctacttttactttggtccctatgacacctcata 14889920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 49 - 119
Target Start/End: Original strand, 14891049 - 14891119
Alignment:
Q  49 atatcgattttcgattcagggaccaaagtggccattttcgactttcactttagtccccgtgacacgtcata 119  Q
    |||| |||||| ||||||||||| |||||| |||||||| ||| ||||||| ||||  ||||||| |||||    
T  14891049 atattgatttttgattcagggactaaagtgaccattttctactatcactttggtccttgtgacacctcata 14891119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 49 - 119
Target Start/End: Original strand, 40612561 - 40612631
Alignment:
Q  49 atatcgattttcgattcagggaccaaagtggccattttcgactttcactttagtccccgtgacacgtcata 119  Q
    |||| |||||| | |||||||||||||||  |||||||| ||||||||||| ||||  ||||||| |||||    
T  40612561 atattgatttttggttcagggaccaaagtaaccattttctactttcactttggtccttgtgacacctcata 40612631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 129
Target Start/End: Complemental strand, 18004880 - 18004799
Alignment:
Q  48 gatatcgattttcgattcagggaccaaagtggccattttcgactttcactttagtccccgtgacacgtcatactccttgtca 129  Q
    ||||| || ||| |||||||||||||||||| | |||||| ||||||| ||||||| | ||||||| ||| |  ||||||||    
T  18004880 gatattgaattttgattcagggaccaaagtgactattttctactttcattttagtctctgtgacacctcacatgccttgtca 18004799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 245 - 282
Target Start/End: Original strand, 24900410 - 24900447
Alignment:
Q  245 tatgtgacagcgaggtgcacagtcagggactaaagtga 282  Q
    ||||||||||||||||||| |||||||||| |||||||    
T  24900410 tatgtgacagcgaggtgcagagtcagggaccaaagtga 24900447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 95; Significance: 5e-46; HSPs: 74)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 168 - 282
Target Start/End: Complemental strand, 48646171 - 48646057
Alignment:
Q  168 tttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagt 267  Q
    |||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||| |||    
T  48646171 tttaacgacagagactaaagtgataacggaagtgtagagtcagggacttatttgtatttaatcctgagtcagggacctatgtgacagcgaggtgcatagt 48646072  T
Q  268 cagggactaaagtga 282  Q
    ||||||| |||||||    
T  48646071 cagggaccaaagtga 48646057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 143 - 280
Target Start/End: Original strand, 10899049 - 10899186
Alignment:
Q  143 gccacatcatcacttaacnnnnnnntttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcaggga 242  Q
    ||||||||||||||||||       ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||    
T  10899049 gccacatcatcacttaacagatttttttaacgtcagggactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgggtcaagga 10899148  T
Q  243 tctatgtgacagcgaggtgcacagtcagggactaaagt 280  Q
    ||||||||||||||||||||| |||||||||| |||||    
T  10899149 tctatgtgacagcgaggtgcagagtcagggaccaaagt 10899186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 143 - 282
Target Start/End: Complemental strand, 35727845 - 35727707
Alignment:
Q  143 gccacatcatcacttaacnnnnnnntttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcaggga 242  Q
    ||||||||||||||||||       ||||||| ||| |||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||    
T  35727845 gccacatcatcacttaacagagatttttaacgtcag-gactaaagtgataacggatgtgcagagtcagagacttatttatatttaatcctgagtcaggga 35727747  T
Q  243 tctatgtgacagcgaggtgcacagtcagggactaaagtga 282  Q
     |||||||||||||||||||| |||||||||  |||||||    
T  35727746 cctatgtgacagcgaggtgcagagtcagggatcaaagtga 35727707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 186 - 282
Target Start/End: Complemental strand, 44333243 - 44333147
Alignment:
Q  186 agtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagtga 282  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||| |||||||||| |||||||    
T  44333243 agtgataacggaagtgcagagtcagagacttatttgtatttaatcatgagtcagggacctatgtgacagcgaggtgcagagtcagggaccaaagtga 44333147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 146 - 282
Target Start/End: Complemental strand, 7258419 - 7258283
Alignment:
Q  146 acatcatcacttaacnnnnnnntttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatct 245  Q
    |||||||||||||||       ||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| ||    
T  7258419 acatcatcacttaacagatttttttaacgtcagggactaaagtgataacagaagtgcagagtcagagacttatttgtatttaatcctgagttagggacct 7258320  T
Q  246 atgtgacagcgaggtgcacagtcagggactaaagtga 282  Q
    |||||||| ||||||| | |||||||||| |||||||    
T  7258319 atgtgacaacgaggtgtagagtcagggaccaaagtga 7258283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 168 - 282
Target Start/End: Original strand, 48788673 - 48788787
Alignment:
Q  168 tttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagt 267  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||  ||||||||||| |||||||||||||||||||| |||    
T  48788673 tttaacgtcagagactaaagtgataacggaagtgcagagtcagagacttatttatatttaattatgagtcagggacctatgtgacagcgaggtgcaaagt 48788772  T
Q  268 cagggactaaagtga 282  Q
    || |||  |||||||    
T  48788773 caaggatcaaagtga 48788787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 49 - 282
Target Start/End: Complemental strand, 46286744 - 46286511
Alignment:
Q  49 atatcgattttcgattcagggaccaaagtggccattttcgactttcactttagtccccgtgacacgtcatactccttgtcagcataagccaagtgccaca 148  Q
    |||| |||||| | |||| ||| ||||||| | |||||| ||||||| ||| |||   || |||| ||||||| ||||| || |||||  | | |||| |    
T  46286744 atattgatttttggttcaaggatcaaagtgactattttctactttcattttggtcaatgtaacacatcatacttcttgtgagtataagatatgcgccata 46286645  T
Q  149 tcatcacttaacnnnnnnntttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatg 248  Q
    ||||||||||||       |||||||  ||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || |     
T  46286644 tcatcacttaacatatttttttaacggtagagattaaagtgataacagaagtgcagagtcagagacttatttgtatttaatcctgagtcagggacctttc 46286545  T
Q  249 tgacagcgaggtgcacagtcagggactaaagtga 282  Q
    | |||||||| || | ||||||||||||||||||    
T  46286544 taacagcgagatgaagagtcagggactaaagtga 46286511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 181 - 282
Target Start/End: Complemental strand, 43457566 - 43457465
Alignment:
Q  181 actaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagt 280  Q
    |||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| ||||| ||||||||| |||| | ||||||||||||||    
T  43457566 actaaagtgataacggaagtgcagagtcggggacttatttgtatttaatcctgagtcagggacctatgcgacagcgagctgcagaatcagggactaaagt 43457467  T
Q  281 ga 282  Q
    ||    
T  43457466 ga 43457465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 55 - 270
Target Start/End: Original strand, 8048672 - 8048887
Alignment:
Q  55 attttcgattcagggaccaaagtggccattttcgactttcactttagtccccgtgacacgtcatactccttgtcagcataagccaagtgccacatcatca 154  Q
    ||||||| |||||||||||||||| |||||||| ||||||||||||||||  ||||||| |||||     ||||| | ||   || ||| ||||||||||    
T  8048672 attttcggttcagggaccaaagtgaccattttctactttcactttagtccatgtgacacatcatatgttatgtcatcgtataacatgtgacacatcatca 8048771  T
Q  155 cttaacnnnnnnntttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacag 254  Q
    |||||        |||||||  | ||| |||||||||||||||||||||||||| ||||||| ||||||||||||| |||||||| || || |||| |||    
T  8048772 cttaatagaattatttaacgttaaagattaaagtgataacggaagtgcagagtcggagacttctttgtatttaatcttgagtcagagacctttgtgtcag 8048871  T
Q  255 cgaggtgcacagtcag 270  Q
    ||||||||| ||||||    
T  8048872 cgaggtgcagagtcag 8048887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 168 - 278
Target Start/End: Complemental strand, 8375036 - 8374926
Alignment:
Q  168 tttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagt 267  Q
    ||||||| || ||||||||||||||||||||||||| | ||||| |||| |||||||||||| ||||||||| || |||||||||||||||||||| |||    
T  8375036 tttaacgtcaaagactaaagtgataacggaagtgcaaaatcagaaacttttttgtatttaattctgagtcagagacctatgtgacagcgaggtgcagagt 8374937  T
Q  268 cagggactaaa 278  Q
    |||||||||||    
T  8374936 cagggactaaa 8374926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 168 - 282
Target Start/End: Original strand, 30925009 - 30925123
Alignment:
Q  168 tttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagt 267  Q
    ||||||| ||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| ||| ||||||||| | ||| |||| | |    
T  30925009 tttaacgtcagagactaaagtaataacggaagtgcatagtcagagacttatttgtatttaatcctgagtcaaggacctatgtgactgggagctgcagaat 30925108  T
Q  268 cagggactaaagtga 282  Q
    |||||| ||||||||    
T  30925109 cagggattaaagtga 30925123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 318 - 425
Target Start/End: Original strand, 48705644 - 48705750
Alignment:
Q  318 gaaattattactttttaacttttagaaagttgaattcaacatttttcaccatttttcaagaaattatttctatttatgttcctcttaaccaatgcacaaa 417  Q
    |||||||  |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| ||||||| |||||| | ||    
T  48705644 gaaattacaactttttaacttttagaaagttgaattcaacacttttcaccatttttcaacaaattatttctatttatgtt-ctcttaaacaatgccccaa 48705742  T
Q  418 ggacactc 425  Q
    || |||||    
T  48705743 ggccactc 48705750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 168 - 282
Target Start/End: Original strand, 48647444 - 48647558
Alignment:
Q  168 tttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagt 267  Q
    ||||||| ||| |||||||||||||||  ||||||||||| |||||||||||||||||||||||||||||||||| |||||||| |||||| || | | |    
T  48647444 tttaacgtcagggactaaagtgataacaaaagtgcagagtgagagacttatttgtatttaatcctgagtcagggacctatgtgatagcgagctgtagaat 48647543  T
Q  268 cagggactaaagtga 282  Q
    ||||| |||||||||    
T  48647544 cagggtctaaagtga 48647558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 180 - 282
Target Start/End: Complemental strand, 48777366 - 48777264
Alignment:
Q  180 gactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaag 279  Q
    ||||||||||||||||||||||||||||||| || |||||||||||||||| |||||||||||  |||||||||||||| |||| | |||| ||||||||    
T  48777366 gactaaagtgataacggaagtgcagagtcagggaattatttgtatttaatcatgagtcagggacttatgtgacagcgagctgcagaatcagagactaaag 48777267  T
Q  280 tga 282  Q
    |||    
T  48777266 tga 48777264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 145 - 261
Target Start/End: Original strand, 13578299 - 13578414
Alignment:
Q  145 cacatcatcacttaacnnnnnnntttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatc 244  Q
    ||||||||||||||||       ||||||| ||| ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  13578299 cacatcatcacttaacataattatttaacgtcag-gactaaagtgataacggaagtgcagagtcagtgacttatttgtatttaattctgagtcagtgatc 13578397  T
Q  245 tatgtgacagcgaggtg 261  Q
    | | |||||||||||||    
T  13578398 tttatgacagcgaggtg 13578414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 141 - 282
Target Start/End: Original strand, 44334424 - 44334564
Alignment:
Q  141 gtgccacatcatcacttaacnnnnnnntttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagg 240  Q
    ||||||||||||||||||||       ||||| | ||| |||||||||||||| |||||||||||||||| ||||||||| ||||||||| |||||||||    
T  44334424 gtgccacatcatcacttaacatattt-tttaatgtcagggactaaagtgataatggaagtgcagagtcagggacttatttatatttaatcatgagtcagg 44334522  T
Q  241 gatctatgtgacagcgaggtgcacagtcagggactaaagtga 282  Q
    || |||||| |||||||| |||| | ||||| ||||||||||    
T  44334523 gacctatgtaacagcgagctgcagaatcaggaactaaagtga 44334564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 143 - 258
Target Start/End: Original strand, 7259660 - 7259775
Alignment:
Q  143 gccacatcatcacttaacnnnnnnntttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcaggga 242  Q
    ||||||||||||||||||       ||||||| ||| |||||||||||||||||||||| |||||||| ||||||||||||||||||||||| |||| ||    
T  7259660 gccacatcatcacttaacagatttttttaacgtcagggactaaagtgataacggaagtgtagagtcagggacttatttgtatttaatcctgaatcagaga 7259759  T
Q  243 tctatgtgacagcgag 258  Q
     | |||||||||||||    
T  7259760 cccatgtgacagcgag 7259775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 180 - 282
Target Start/End: Original strand, 8375596 - 8375698
Alignment:
Q  180 gactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaag 279  Q
    ||||||| |||||||||||||||||||||||| |||| ||||||||||||| ||||||||||| ||||||||||| | |||||  ||||||||||||| |    
T  8375596 gactaaattgataacggaagtgcagagtcagaaacttctttgtatttaatcatgagtcagggacctatgtgacagtgcggtgcgaagtcagggactaatg 8375695  T
Q  280 tga 282  Q
    |||    
T  8375696 tga 8375698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 143 - 282
Target Start/End: Original strand, 35729062 - 35729201
Alignment:
Q  143 gccacatcatcacttaacnnnnnnntttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcaggga 242  Q
    ||||||||||||||||||       ||||| | ||| ||||| ||||||| ||||||||||||||||| ||||||||||||| ||||||| ||||| |||    
T  35729062 gccacatcatcacttaacagatttatttaatgtcagggactacagtgatagcggaagtgcagagtcagtgacttatttgtatgtaatcctaagtcaagga 35729161  T
Q  243 tctatgtgacagcgaggtgcacagtcagggactaaagtga 282  Q
     ||||||||||||||| |||| | ||||||| ||||||||    
T  35729162 cctatgtgacagcgagctgcaaaatcagggaataaagtga 35729201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 143 - 274
Target Start/End: Complemental strand, 42477527 - 42477397
Alignment:
Q  143 gccacatcatcacttaacnnnnnnntttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcaggga 242  Q
    ||||||||||||||||||       ||||||| ||| || |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||    
T  42477527 gccacatcatcacttaacatatttttttaacgtcagggattaaaatgataacggaagtgcagagtcag-gacttatttgtatttaatcctgagtcagaga 42477429  T
Q  243 tctatgtgacagcgaggtgcacagtcagggac 274  Q
     ||||| |||| ||||||||| ||||| ||||    
T  42477428 cctatgcgacaacgaggtgcagagtcaaggac 42477397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 48 - 282
Target Start/End: Original strand, 12223580 - 12223814
Alignment:
Q  48 gatatcgattttcgattcagggaccaaagtggccattttcgactttcactttagtccccgtgacacgtcatactccttgtcagcataagccaagtgccac 147  Q
    ||||| |||||| | |||| ||| ||||||| | |||||  |||||||||||||| || ||||||  |||||   | ||||| | |||  |  ||| |||    
T  12223580 gatattgatttttggttcaaggatcaaagtgacaattttttactttcactttagttcctgtgacaactcatatgtcatgtcatcgtaaaacctgtgtcac 12223679  T
Q  148 atcatcacttaacnnnnnnntttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctat 247  Q
    |||||||||||||       ||||||  ||| ||||||||| ||||||||| ||||||||||| ||||| ||| ||||||||||||||||||||| ||||    
T  12223680 atcatcacttaacagaattatttaacatcagtgactaaagtaataacggaactgcagagtcagggacttctttatatttaatcctgagtcagggacctat 12223779  T
Q  248 gtgacagcgaggtgcacagtcagggactaaagtga 282  Q
    ||||||  || |||||  |||||||||||||||||    
T  12223780 gtgacattgatgtgcagtgtcagggactaaagtga 12223814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 182 - 282
Target Start/End: Complemental strand, 45583792 - 45583692
Alignment:
Q  182 ctaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagtg 281  Q
    |||||||||||||||||||||||| ||||  |||||| |||||||||| |||||||||||| |||||||| |||||  |||| | |||||||||||||||    
T  45583792 ctaaagtgataacggaagtgcagaatcaggaacttatctgtatttaattctgagtcagggacctatgtgatagcgaactgcagaatcagggactaaagtg 45583693  T
Q  282 a 282  Q
    |    
T  45583692 a 45583692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 168 - 250
Target Start/End: Complemental strand, 44529150 - 44529068
Alignment:
Q  168 tttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtg 250  Q
    ||||||| ||| ||||||||||||||| ||||||  ||||| ||||||||||||||||||||| |||||||||||||||||||    
T  44529150 tttaacgtcagggactaaagtgataacagaagtgttgagtcggagacttatttgtatttaatcatgagtcagggatctatgtg 44529068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 180 - 242
Target Start/End: Original strand, 44530624 - 44530686
Alignment:
Q  180 gactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcaggga 242  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||    
T  44530624 gactaaagtgataacggaagtgcagagtcagagacttatttatatttaatcctgagtcgggga 44530686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 145 - 263
Target Start/End: Complemental strand, 12220167 - 12220050
Alignment:
Q  145 cacatcatcacttaacnnnnnnntttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatc 244  Q
    ||||||||||||||||       ||||||| || |||||||||||||| | ||||||||||||||||||||| ||| ||||||||| ||||||||| |||    
T  12220167 cacatcatcacttaacaaaattatttaacgtca-agactaaagtgatatcagaagtgcagagtcagagacttctttctatttaatcttgagtcaggaatc 12220069  T
Q  245 tatgtgacagcgaggtgca 263  Q
    | ||||||| |||||||||    
T  12220068 tttgtgacaacgaggtgca 12220050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 327 - 412
Target Start/End: Original strand, 33474361 - 33474445
Alignment:
Q  327 actttttaacttttagaaagttgaattcaacatttttcaccatttttcaagaaattatttctatttatgttcctcttaaccaatgc 412  Q
    ||||||| |||||||||||||||||||||||| ||||||  ||||||||| ||||||||||||||| |||| ||||||||||||||    
T  33474361 actttttgacttttagaaagttgaattcaacacttttcataatttttcaacaaattatttctatttttgtt-ctcttaaccaatgc 33474445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 143 - 237
Target Start/End: Original strand, 45584472 - 45584566
Alignment:
Q  143 gccacatcatcacttaacnnnnnnntttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtc 237  Q
    ||||||||||||||||||       ||||||| ||| ||||||||||||||||||||||||||||||  | ||||||||||||||||||||||||    
T  45584472 gccacatcatcacttaacagatttttttaacgtcagggactaaagtgataacggaagtgcagagtcattggcttatttgtatttaatcctgagtc 45584566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 180 - 282
Target Start/End: Complemental strand, 39708213 - 39708111
Alignment:
Q  180 gactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaag 279  Q
    |||||||||||||||||||||||| |||| | ||||| |||||||| |||| ||||||| ||| || |||||| ||||||| || |||||| ||||||||    
T  39708213 gactaaagtgataacggaagtgcaaagtcggtgacttctttgtattcaatcttgagtcatggacctttgtgacggcgaggtacagagtcagagactaaag 39708114  T
Q  280 tga 282  Q
    |||    
T  39708113 tga 39708111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 141 - 282
Target Start/End: Original strand, 5930107 - 5930247
Alignment:
Q  141 gtgccacatcatcacttaacnnnnnnntttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagg 240  Q
    ||||||||||||||||||||       ||||| | ||| |||||||||||||||||||||||| |||| || | ||  |||||||||||||||||| |||    
T  5930107 gtgccacatcatcacttaacagaattatttaatggcagggactaaagtgataacggaagtgcacagtc-gaaaatttcttgtatttaatcctgagttagg 5930205  T
Q  241 gatctatgtgacagcgaggtgcacagtcagggactaaagtga 282  Q
    || || ||||| ||||| ||||| ||| || |||||||||||    
T  5930206 gacctttgtgatagcgaagtgcaaagtaagagactaaagtga 5930247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 190 - 282
Target Start/End: Complemental strand, 21062917 - 21062825
Alignment:
Q  190 ataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagtga 282  Q
    |||||||| |||||||| |   ||||| | ||||||||||||||||||| ||| || | ||||||||||||||| ||||||||||||||||||    
T  21062917 ataacggaggtgcagagccgaggacttctatgtatttaatcctgagtcaaggacctttatgacagcgaggtgcaaagtcagggactaaagtga 21062825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 63 - 135
Target Start/End: Complemental strand, 24287707 - 24287635
Alignment:
Q  63 ttcagggaccaaagtggccattttcgactttcactttagtccccgtgacacgtcatactccttgtcagcataa 135  Q
    ||||||||| |||| | |||||||| ||||||||||||||||| ||||||| |||||||||||||| ||||||    
T  24287707 ttcagggactaaagcgaccattttctactttcactttagtccctgtgacacctcatactccttgtcggcataa 24287635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 168 - 280
Target Start/End: Original strand, 33607624 - 33607736
Alignment:
Q  168 tttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagt 267  Q
    ||||||| ||| | ||||| |||||||||||||||||| |||||||||| ||||||||||||||||| |||| || || ||| ||| ||| || || |||    
T  33607624 tttaacgtcagggtctaaaatgataacggaagtgcagaatcagagacttctttgtatttaatcctgaatcagagacctttgtaacatcgaagtacatagt 33607723  T
Q  268 cagggactaaagt 280  Q
     || |||||||||    
T  33607724 tagagactaaagt 33607736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 190 - 282
Target Start/End: Complemental strand, 34705009 - 34704917
Alignment:
Q  190 ataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagtga 282  Q
    |||||| |||| || |||||||||||| |||||||||||||||||||||| |  || ||||||| ||||||||| |||| | |||||||||||    
T  34705009 ataacgaaagtacacagtcagagacttctttgtatttaatcctgagtcagaggcctttgtgacaacgaggtgcagagtcggagactaaagtga 34704917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 48646412 - 48646368
Alignment:
Q  1 taactgatagtaagtatgcacagtcagggacctaacagtaagttg 45  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  48646412 taactgatagtaagtatgcacagtcagggacctaacagtaagttg 48646368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 55 - 255
Target Start/End: Original strand, 24288754 - 24288954
Alignment:
Q  55 attttcgattcagggaccaaagtggccattttcgactttcactttagtccccgtgacacgtcatactccttgtcagcataagccaagtgccacatcatca 154  Q
    ||||||| |||| ||| |||| |  |||||||| ||||| | ||||||||  || |||| |||||||||||||||||||||  |   || ||||||||||    
T  24288754 attttcggttcaaggatcaaaattaccattttctacttttattttagtccatgtcacacatcatactccttgtcagcataaaacctttgtcacatcatca 24288853  T
Q  155 cttaacnnnnnnntttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacag 254  Q
     |||||       | ||||| |||||| ||||||||||| ||||||||| | |||  ||||  |||||| |||||||||||| || ||||| ||||||||    
T  24288854 gttaacagaattatataacgccagagaataaagtgataatggaagtgcacattcaaggactactttgtaattaatcctgagttagagatctttgtgacag 24288953  T
Q  255 c 255  Q
    |    
T  24288954 c 24288954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 74 - 234
Target Start/End: Original strand, 25621628 - 25621788
Alignment:
Q  74 aagtggccattttcgactttcactttagtccccgtgacacgtcatactccttgtcagcataagccaagtgccacatcatcacttaacnnnnnnntttaac 173  Q
    ||||| |||||||| ||||||||||||||||  || |||| |||||| |||||| |||||||      ||||| ||||||| |||||       ||||||    
T  25621628 aagtgaccattttctactttcactttagtccttgttacacttcataccccttgtgagcataaaatctttgccaaatcatcagttaacaaaattatttaac 25621727  T
Q  174 gacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctga 234  Q
    | ||| ||||||||||||||| |||||||| | ||| | ||| ||||||||||||||||||    
T  25621728 gtcagtgactaaagtgataacagaagtgcacattcaaaaactaatttgtatttaatcctga 25621788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 80 - 262
Target Start/End: Complemental strand, 27067992 - 27067811
Alignment:
Q  80 ccattttcgactttcactttagtccccgtgacacgtcatactccttgtcagcataagccaagtgccacatcatcacttaacnnnnnnntttaacgacaga 179  Q
    |||||||| ||||||||||||||| | |||||||  ||||||| |||||||||||| |||  || ||||||| |  ||| |       ||||| | ||||    
T  27067992 ccattttctactttcactttagtctctgtgacacaccatactctttgtcagcataaaccatttgtcacatcacccgttagcataattatttaatgtcaga 27067893  T
Q  180 gactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgc 262  Q
    |||||||||||||| | ||||||| | |||| ||||  ||||  |||||||| ||||||| ||||| | ||||||||||||||    
T  27067892 gactaaagtgataatgaaagtgcacattcagggactactttgcttttaatcc-gagtcagagatctttatgacagcgaggtgc 27067811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 80 - 262
Target Start/End: Original strand, 27210321 - 27210502
Alignment:
Q  80 ccattttcgactttcactttagtccccgtgacacgtcatactccttgtcagcataagccaagtgccacatcatcacttaacnnnnnnntttaacgacaga 179  Q
    |||||||| ||||||||||||||| | |||||||  ||||||| |||||||||||| |||  || ||||||| |  ||| |       ||||| | ||||    
T  27210321 ccattttctactttcactttagtctctgtgacacaccatactctttgtcagcataaaccatttgtcacatcacccgttagcataattatttaatgtcaga 27210420  T
Q  180 gactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgc 262  Q
    |||||||||||||| | ||||||| | |||| ||||  ||||  |||||||| ||||||| ||||| | ||||||||||||||    
T  27210421 gactaaagtgataatgaaagtgcacattcagggactactttgcttttaatcc-gagtcagagatctttatgacagcgaggtgc 27210502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 45584256 - 45584301
Alignment:
Q  1 taactgatagtaagtatgcacagtcagggacctaacagtaagttga 46  Q
    |||||||||||||||||||||||||||||||||||||||| |||||    
T  45584256 taactgatagtaagtatgcacagtcagggacctaacagtaggttga 45584301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 191 - 255
Target Start/End: Complemental strand, 10894449 - 10894385
Alignment:
Q  191 taacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagc 255  Q
    ||||||||||||||| | |||||||||||| ||||||||| ||||||||||| |||||| |||||    
T  10894449 taacggaagtgcagaattagagacttatttatatttaatcttgagtcagggacctatgtaacagc 10894385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 145 - 282
Target Start/End: Original strand, 19433912 - 19434049
Alignment:
Q  145 cacatcatcacttaacnnnnnnntttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatc 244  Q
    ||||||||||||||||       ||||||| || |||||||||||||||| ||||||| ||||| | |||||  || ||||||||||| | |||| || |    
T  19433912 cacatcatcacttaacagaattatttaacgccatagactaaagtgataactgaagtgcggagtcggtgacttccttatatttaatcctaaatcagagacc 19434011  T
Q  245 tatgtgacagcgaggtgcacagtcagggactaaagtga 282  Q
    | ||||||| |||| || | ||| ||||||||||||||    
T  19434012 tttgtgacaacgagatggagagttagggactaaagtga 19434049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 55 - 232
Target Start/End: Complemental strand, 32793406 - 32793229
Alignment:
Q  55 attttcgattcagggaccaaagtggccattttcgactttcactttagtccccgtgacacgtcatactccttgtcagcataagccaagtgccacatcatca 154  Q
    ||||| ||||||||||||||| ||  ||||||  ||||||||||||||||  ||||||| ||| |   | |||||   |||  |  ||||||||||||||    
T  32793406 atttttgattcagggaccaaaatgatcattttttactttcactttagtccatgtgacacctcacatgtcatgtcattgtaaaacgtgtgccacatcatca 32793307  T
Q  155 cttaacnnnnnnntttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcct 232  Q
     |||||       ||||||| || |||||||||||||||| ||| |||||| |||  |||||||||||||||||||||    
T  32793306 gttaacataattatttaacgccaaagactaaagtgataaccgaaatgcagaatcaatgacttatttgtatttaatcct 32793229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 42477743 - 42477699
Alignment:
Q  1 taactgatagtaagtatgcacagtcagggacctaacagtaagttg 45  Q
    ||||||||||||||||||||||||||||||||||||| |||||||    
T  42477743 taactgatagtaagtatgcacagtcagggacctaacattaagttg 42477699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 169 - 229
Target Start/End: Original strand, 43461730 - 43461789
Alignment:
Q  169 ttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaat 229  Q
    |||||| |||||||||||||||||||||||||||| ||||| | |||||||||||||||||    
T  43461730 ttaacgtcagagactaaagtgataacggaagtgcatagtca-aaacttatttgtatttaat 43461789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 45583950 - 45583906
Alignment:
Q  1 taactgatagtaagtatgcacagtcagggacctaacagtaagttg 45  Q
    |||||||||||||||||||| ||||||||||||||||||||||||    
T  45583950 taactgatagtaagtatgcatagtcagggacctaacagtaagttg 45583906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 48788435 - 48788479
Alignment:
Q  1 taactgatagtaagtatgcacagtcagggacctaacagtaagttg 45  Q
    ||||||||||||||||||||||||||||||||||||| |||||||    
T  48788435 taactgatagtaagtatgcacagtcagggacctaacaataagttg 48788479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 49 - 119
Target Start/End: Complemental strand, 7258496 - 7258426
Alignment:
Q  49 atatcgattttcgattcagggaccaaagtggccattttcgactttcactttagtccccgtgacacgtcata 119  Q
    |||| |||||| | |||||||||||||||| |||||||| ||||||||||| ||||| ||||||| |||||    
T  7258496 atattgatttttggttcagggaccaaagtgaccattttctactttcactttggtccctgtgacacctcata 7258426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 44
Target Start/End: Complemental strand, 39708484 - 39708442
Alignment:
Q  2 aactgatagtaagtatgcacagtcagggacctaacagtaagtt 44  Q
    |||||||||||||||| ||||||||||||||||||||||||||    
T  39708484 aactgatagtaagtatacacagtcagggacctaacagtaagtt 39708442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 62 - 132
Target Start/End: Complemental strand, 39824357 - 39824287
Alignment:
Q  62 attcagggaccaaagtggccattttcgactttcactttagtccccgtgacacgtcatactccttgtcagca 132  Q
    |||||||| | |||||| |||||||| ||||||||||||||||| ||||||| |||| | |||||||||||    
T  39824357 attcaggggctaaagtgaccattttctactttcactttagtccctgtgacacttcatgcaccttgtcagca 39824287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 10898833 - 10898877
Alignment:
Q  1 taactgatagtaagtatgcacagtcagggacctaacagtaagttg 45  Q
    ||||||||| |||||||||| ||||||||||||||||||||||||    
T  10898833 taactgatactaagtatgcatagtcagggacctaacagtaagttg 10898877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 178 - 270
Target Start/End: Complemental strand, 24844685 - 24844593
Alignment:
Q  178 gagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcag 270  Q
    ||||||||| |||||| ||||||||| | |||  ||||  ||||||||||||||||||| | ||| ||  |||||||||||||||| ||||||    
T  24844685 gagactaaactgataatggaagtgcacattcaatgactactttgtatttaatcctgagttatggaccttggtgacagcgaggtgcagagtcag 24844593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 44333500 - 44333456
Alignment:
Q  1 taactgatagtaagtatgcacagtcagggacctaacagtaagttg 45  Q
    |||||||||||||||||||||||||| |||||||||| |||||||    
T  44333500 taactgatagtaagtatgcacagtcaaggacctaacaataagttg 44333456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 168 - 274
Target Start/End: Original strand, 8879544 - 8879651
Alignment:
Q  168 tttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatc-tatgtgacagcgaggtgcacag 266  Q
    ||||||| ||| ||||||||||||||| ||| |||| | ||||  |||  ||||||||||||||||||||||| | | | | ||||||| ||||||| ||    
T  8879544 tttaacgtcagggactaaagtgataacagaaatgcacattcaggaactactttgtatttaatcctgagtcaggaagcttttatgacagctaggtgcagag 8879643  T
Q  267 tcagggac 274  Q
    ||||||||    
T  8879644 tcagggac 8879651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 33607276 - 33607315
Alignment:
Q  1 taactgatagtaagtatgcacagtcagggacctaacagta 40  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  33607276 taactgatagtaagtatgcaaagtcagggacctaacagta 33607315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 7259452 - 7259486
Alignment:
Q  1 taactgatagtaagtatgcacagtcagggacctaa 35  Q
    |||||||||||||||||||||||||||||||||||    
T  7259452 taactgatagtaagtatgcacagtcagggacctaa 7259486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 48 - 261
Target Start/End: Original strand, 7509353 - 7509565
Alignment:
Q  48 gatatcgattttcgattcagggaccaaagtggccatttt-cgactttcactttagtccccgtgacacgtcatactccttgtcagcataagccaagtgcca 146  Q
    ||||| |||||| | || ||||||||||||| | ||||| | ||||||||||||||||   |||||| ||||| ||| ||||| | || |  | || |||    
T  7509353 gatattgatttttggtttagggaccaaagtgactatttttctactttcactttagtccatatgacacatcatattccatgtcatcgtatg--atgtacca 7509450  T
Q  147 catcatcacttaacnnnnnnntttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatcta 246  Q
    ||| ||||||||||       ||||||| ||| |  |||||| |||||||||||||||| || ||||||| ||| ||||||||| ||| |||  || ||     
T  7509451 cataatcacttaacaaaattatttaacgtcaggggttaaagtaataacggaagtgcagaatctgagacttctttatatttaatcatgaatcaaagacctt 7509550  T
Q  247 tgtgacagcgaggtg 261  Q
    ||||||| |||||||    
T  7509551 tgtgacaacgaggtg 7509565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 180 - 258
Target Start/End: Original strand, 34888936 - 34889014
Alignment:
Q  180 gactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgag 258  Q
    |||||||||||||||||||||||||||| |  ||| | ||| ||||||||| ||||| || || || ||||||||||||    
T  34888936 gactaaagtgataacggaagtgcagagttaaggacatctttatatttaatcatgagtgagagacctttgtgacagcgag 34889014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 49 - 119
Target Start/End: Complemental strand, 44333358 - 44333288
Alignment:
Q  49 atatcgattttcgattcagggaccaaagtggccattttcgactttcactttagtccccgtgacacgtcata 119  Q
    |||| |||||| | |||||||||||||||| |||||||| |||||||| || ||||| ||||||| |||||    
T  44333358 atattgatttttggttcagggaccaaagtgaccattttctactttcacgttggtccctgtgacacctcata 44333288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 49 - 119
Target Start/End: Original strand, 48788574 - 48788644
Alignment:
Q  49 atatcgattttcgattcagggaccaaagtggccattttcgactttcactttagtccccgtgacacgtcata 119  Q
    |||| |||||| | |||||||||||||||| |||||||| ||||||||||| ||||  ||||||| |||||    
T  48788574 atattgatttttggttcagggaccaaagtgaccattttctactttcactttggtccttgtgacacctcata 48788644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 44
Target Start/End: Original strand, 32794560 - 32794597
Alignment:
Q  7 atagtaagtatgcacagtcagggacctaacagtaagtt 44  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  32794560 atagtaagtatgcacagtcagggacctaacaataagtt 32794597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 30924776 - 30924812
Alignment:
Q  1 taactgatagtaagtatgcacagtcagggacctaaca 37  Q
    ||||||||||||||||||||||||||| |||||||||    
T  30924776 taactgatagtaagtatgcacagtcagagacctaaca 30924812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 63 - 119
Target Start/End: Complemental strand, 42477587 - 42477531
Alignment:
Q  63 ttcagggaccaaagtggccattttcgactttcactttagtccccgtgacacgtcata 119  Q
    ||||||||||||||||  ||||||| ||||||||||| ||||| ||||||| |||||    
T  42477587 ttcagggaccaaagtgatcattttctactttcactttggtccctgtgacacctcata 42477531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 12221666 - 12221623
Alignment:
Q  1 taactgatagtaagtatgcacagtcagggacctaacagtaagtt 44  Q
    ||||||||| |||||||||||| ||| |||||||||||||||||    
T  12221666 taactgataataagtatgcacaatcacggacctaacagtaagtt 12221623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 230
Target Start/End: Complemental strand, 22621347 - 22621187
Alignment:
Q  70 accaaagtggccattttcgactttcactttagtccccgtgacacgtcatactccttgtcagcataagccaagtgccacatcatcacttaacnnnnnnntt 169  Q
    |||||||||  ||||||| ||||||||||||||||  ||||||| |||| | ||||||||||| ||  ||  || ||  |||||| |||||       ||    
T  22621347 accaaagtgatcattttctactttcactttagtccttgtgacacatcatgcgccttgtcagcaaaaaacatttgtcaactcatcagttaacagaagtttt 22621248  T
Q  170 taacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatc 230  Q
    |||||||| |||||| | ||||||| |||||||| | |||| ||||  ||| |||||||||    
T  22621247 taacgacatagactagactgataacagaagtgcacattcagggactactttatatttaatc 22621187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 119
Target Start/End: Complemental strand, 43457674 - 43457619
Alignment:
Q  64 tcagggaccaaagtggccattttcgactttcactttagtccccgtgacacgtcata 119  Q
    ||||||||||||||| |||||||  ||||||||||||||| | ||||||| |||||    
T  43457674 tcagggaccaaagtgaccattttttactttcactttagtctctgtgacacctcata 43457619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 48787647 - 48787608
Alignment:
Q  1 taactgatagtaagtatgcacagtcagggacctaacagta 40  Q
    ||||||||||||| ||||||||||||| ||||||||||||    
T  48787647 taactgatagtaaatatgcacagtcagtgacctaacagta 48787608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 48 - 118
Target Start/End: Complemental strand, 385061 - 384991
Alignment:
Q  48 gatatcgattttcgattcagggaccaaagtggccattttcgactttcactttagtccccgtgacacgtcat 118  Q
    ||||| |||||||||||||  || ||||||| | |||||| |||||||||||||||  |||||||| ||||    
T  385061 gatattgattttcgattcatagatcaaagtgacaattttctactttcactttagtcaacgtgacacctcat 384991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 48 - 135
Target Start/End: Complemental strand, 8870221 - 8870132
Alignment:
Q  48 gatatcgattttcgattcagggaccaaagtggccattttcgactttcactttagtccccgtgacacgtc--atactccttgtcagcataa 135  Q
    ||||||||||||   |||||||||||||||   ||||||| ||||||| |||||||   ||||||| ||  |||||||||||||||||||    
T  8870221 gatatcgatttttagttcagggaccaaagtaatcattttctactttcattttagtctttgtgacacctcatatactccttgtcagcataa 8870132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 49 - 119
Target Start/End: Original strand, 10898975 - 10899045
Alignment:
Q  49 atatcgattttcgattcagggaccaaagtggccattttcgactttcactttagtccccgtgacacgtcata 119  Q
    |||| |||||| | |||| ||||||||||| |||||||| |||||| |||| ||||| ||||||| |||||    
T  10898975 atattgatttttggttcaaggaccaaagtgaccattttctactttctctttggtccctgtgacacctcata 10899045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 218 - 293
Target Start/End: Complemental strand, 24934876 - 24934799
Alignment:
Q  218 tttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagtga--atttactcaaa 293  Q
    ||||||||||||||| |||||| || || |||||||||||  |||| ||| |||||| |||||||  |||||||||||    
T  24934876 tttgtatttaatcctaagtcagagacctttgtgacagcgatatgcagagttagggaccaaagtgaccatttactcaaa 24934799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 49 - 119
Target Start/End: Original strand, 48647345 - 48647415
Alignment:
Q  49 atatcgattttcgattcagggaccaaagtggccattttcgactttcactttagtccccgtgacacgtcata 119  Q
    |||| |||||| | ||||||||| |||||| |||||||| ||||||||||| ||||  ||||||| |||||    
T  48647345 atattgatttttggttcagggacgaaagtgaccattttctactttcactttggtccttgtgacacctcata 48647415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 113
Target Start/End: Original strand, 8375504 - 8375569
Alignment:
Q  48 gatatcgattttcgattcagggaccaaagtggccattttcgactttcactttagtccccgtgacac 113  Q
    ||||| |||||| | || |||||| |||||| |||||||| ||||||||||||||| | |||||||    
T  8375504 gatattgatttttggtttagggactaaagtgaccattttctactttcactttagtctctgtgacac 8375569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 102
Target Start/End: Complemental strand, 24935018 - 24934965
Alignment:
Q  49 atatcgattttcgattcagggaccaaagtggccattttcgactttcactttagt 102  Q
    |||| |||||||| || ||||| ||||||| |||||||| ||||||||||||||    
T  24935018 atattgattttcggtttagggatcaaagtgaccattttctactttcactttagt 24934965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 201
Target Start/End: Complemental strand, 33060932 - 33060899
Alignment:
Q  168 tttaacgacagagactaaagtgataacggaagtg 201  Q
    ||||||| ||||||||||||||||||||||||||    
T  33060932 tttaacgtcagagactaaagtgataacggaagtg 33060899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 94; Significance: 2e-45; HSPs: 67)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 49 - 282
Target Start/End: Original strand, 21733653 - 21733889
Alignment:
Q  49 atatcgattttcgattcagggaccaaagtggccattttcgactttcactttagtccccgtgacacgtcatactccttgtcagcataagccaagtgccaca 148  Q
    |||| |||||||| ||||| |||||||||| |||||||  |||||||||||||||  |||||||| |||||||||||||||||||||  || ||| ||||    
T  21733653 atattgattttcggttcagagaccaaagtgaccattttttactttcactttagtcatcgtgacacttcatactccttgtcagcataaaacatgtgtcaca 21733752  T
Q  149 tcatcacttaacnnnnnnntttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatc---ctgagtcagggatct 245  Q
    ||||||||||||       ||||||  ||   ||||||||||| ||||||||||||||||||||||||||||||||||||||    ||||||||||| ||    
T  21733753 tcatcacttaacagaattttttaactgcaacaactaaagtgatgacggaagtgcagagtcagagacttatttgtatttaatcatgatgagtcagggacct 21733852  T
Q  246 atgtgacagcgaggtgcacagtcagggactaaagtga 282  Q
     ||||||| ||| || || |||||||||||| |||||    
T  21733853 ttgtgacaacgatgtacaaagtcagggactagagtga 21733889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 144 - 282
Target Start/End: Original strand, 31091504 - 31091642
Alignment:
Q  144 ccacatcatcacttaacnnnnnnntttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggat 243  Q
    |||||||||||||||||       ||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||     
T  31091504 ccacatcatcacttaacatatttttttaacgtcagagactaaagtgataacggaagtgcagagtcagggacttatttgtatttaatcctgagtcagggac 31091603  T
Q  244 ctatgtgacagcgaggtgcacagtcagggactaaagtga 282  Q
    |||||||||||| ||||||| |||||||||| |||||||    
T  31091604 ctatgtgacagcaaggtgcagagtcagggaccaaagtga 31091642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 43 - 282
Target Start/End: Original strand, 34037549 - 34037788
Alignment:
Q  43 ttgaagatatcgattttcgattcagggaccaaagtggccattttcgactttcactttagtccccgtgacacgtcatactccttgtcagcataagccaagt 142  Q
    |||| ||||| |||||| | |||||| | ||||||| | |||||| ||| |||||||||||   ||||||| |||||||||||||||||||||  || ||    
T  34037549 ttgaggatattgatttttggttcaggaatcaaagtgactattttctactgtcactttagtctgtgtgacacctcatactccttgtcagcataaaacatgt 34037648  T
Q  143 gccacatcatcacttaacnnnnnnntttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcaggga 242  Q
    | ||||||||||||||||       ||||||| | |  |||||||||||||| |||||||||||||| |||||||||||||||||||||||||| | |||    
T  34037649 gtcacatcatcacttaacataattttttaacggcgggaactaaagtgataacagaagtgcagagtcatagacttatttgtatttaatcctgagttatgga 34037748  T
Q  243 tctatgtgacagcgaggtgcacagtcagggactaaagtga 282  Q
     || | ||||||| ||||||| ||||| ||||||||||||    
T  34037749 cctttatgacagcaaggtgcagagtcaaggactaaagtga 34037788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 180 - 282
Target Start/End: Original strand, 32766252 - 32766354
Alignment:
Q  180 gactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaag 279  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||| ||||||||| |||||||||| ||||    
T  32766252 gactaaagtgataacggaagtgcagagtcagggacttatttgtatttaatcctgagtcagggacctatgtgacaacgaggtgcagagtcagggaccaaag 32766351  T
Q  280 tga 282  Q
    |||    
T  32766352 tga 32766354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 143 - 282
Target Start/End: Complemental strand, 2910247 - 2910108
Alignment:
Q  143 gccacatcatcacttaacnnnnnnntttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcaggga 242  Q
    ||||||||||||||||||       ||||||| ||| ||||||||||| || ||||||||||||||||||||||||||||||||||||| ||||||||||    
T  2910247 gccacatcatcacttaacagatttttttaacgtcagggactaaagtgacaaaggaagtgcagagtcagagacttatttgtatttaatcccgagtcaggga 2910148  T
Q  243 tctatgtgacagcgaggtgcacagtcagggactaaagtga 282  Q
    |||||||||||||||| |||| | |||  |||||||||||    
T  2910147 tctatgtgacagcgagctgcaaaatcaaagactaaagtga 2910108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 66 - 269
Target Start/End: Original strand, 17466727 - 17466930
Alignment:
Q  66 agggaccaaagtggccattttcgactttcactttagtccccgtgacacgtcatactccttgtcagcataagccaagtgccacatcatcacttaacnnnnn 165  Q
    ||||| |||| || |||||||  |||||||||||||| |  ||||||| |||||  |||||||| | |||  || ||| ||||||||||||||||         
T  17466727 agggatcaaattgaccattttttactttcactttagtgcgtgtgacacctcatatgccttgtcatcctaaaacatgtgtcacatcatcacttaacagaat 17466826  T
Q  166 nntttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcaca 265  Q
      ||||||| |  |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |   ||||||||||||||||||| |    
T  17466827 tatttaacgtcttagactaaagtgataacggaagtgcagagtcagagacttctttgtatttaatcctgagtcagcggcttatgtgacagcgaggtgcaga 17466926  T
Q  266 gtca 269  Q
    ||||    
T  17466927 gtca 17466930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 169 - 282
Target Start/End: Original strand, 40000336 - 40000449
Alignment:
Q  169 ttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtc 268  Q
    |||||| ||| || |||||||||||||||||||||| || |||||||||||||||||||||||| | |||||||||||||| ||||||||||||| ||||    
T  40000336 ttaacgtcagggaataaagtgataacggaagtgcagggttagagacttatttgtatttaatcctcaatcagggatctatgtaacagcgaggtgcagagtc 40000435  T
Q  269 agggactaaagtga 282  Q
    |||||| |||||||    
T  40000436 agggaccaaagtga 40000449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 180 - 279
Target Start/End: Original strand, 17330243 - 17330342
Alignment:
Q  180 gactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaag 279  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| |||| | ||| |||||||||    
T  17330243 gactaaagtgataacggaaatgcagagtcagagacttatttgtatttaatcctgagtcagggacctatgtgacagtgagctgcagaatcaaggactaaag 17330342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 180 - 282
Target Start/End: Original strand, 24459459 - 24459561
Alignment:
Q  180 gactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaag 279  Q
    ||||||||||||||  ||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||||||| |||| |||||||||| ||||    
T  24459459 gactaaagtgataatagaagtgcagggtcagagacttatttgtatttaatcctgattcagggacctatgtgacagcgagatgcagagtcagggaccaaag 24459558  T
Q  280 tga 282  Q
    |||    
T  24459559 tga 24459561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 168 - 278
Target Start/End: Complemental strand, 31090286 - 31090176
Alignment:
Q  168 tttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagt 267  Q
    ||||||| ||| ||||||| | ||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||||| |||| | |    
T  31090286 tttaacgtcagggactaaaatcataacggaagtgcagagtcagagacttatttatatttaatcctgagtcaaggacctatgtgacagcgagctgcagaat 31090187  T
Q  268 cagggactaaa 278  Q
    |||||||||||    
T  31090186 cagggactaaa 31090176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 144 - 282
Target Start/End: Complemental strand, 39015151 - 39015013
Alignment:
Q  144 ccacatcatcacttaacnnnnnnntttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggat 243  Q
    |||||||||||||||||       |||||||  ||| |||||| |||||| | ||||||||||||| |||| ||||||||||||||||||||||| ||||    
T  39015151 ccacatcatcacttaacaaatatttttaacgttagaaactaaaatgataatgaaagtgcagagtcaaagacgtatttgtatttaatcctgagtcaaggat 39015052  T
Q  244 ctatgtgacagcgaggtgcacagtcagggactaaagtga 282  Q
    ||||||| |||||||||||| |||||||||| |||||||    
T  39015051 ctatgtggcagcgaggtgcagagtcagggacaaaagtga 39015013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 168 - 282
Target Start/End: Complemental strand, 24458182 - 24458068
Alignment:
Q  168 tttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagt 267  Q
    |||||||  ||||||||||||||||||| ||||| ||||||||| |||||||||||||||||  ||||||||||| |||||||| |||||| |||| | |    
T  24458182 tttaacgttagagactaaagtgataacgaaagtgtagagtcagaaacttatttgtatttaattttgagtcagggacctatgtgatagcgagctgcataat 24458083  T
Q  268 cagggactaaagtga 282  Q
    |||||||||||||||    
T  24458082 cagggactaaagtga 24458068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 168 - 282
Target Start/End: Complemental strand, 32765060 - 32764946
Alignment:
Q  168 tttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagt 267  Q
    ||||||| ||| || |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| || |||| ||||| | || |||| | |    
T  32765060 tttaacgtcagggattaaagtgataacggaagtgcagagtcagggacttatttgtatttaatcctgagtcagagacctatatgacaactagctgcagaat 32764961  T
Q  268 cagggactaaagtga 282  Q
    |||||||||||||||    
T  32764960 cagggactaaagtga 32764946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 48 - 282
Target Start/End: Original strand, 34582551 - 34582785
Alignment:
Q  48 gatatcgattttcgattcagggaccaaagtggccattttcgactttcactttagtccccgtgacacgtcatactccttgtcagcataagccaagtgccac 147  Q
    ||||| ||||||  |||||||||| ||||||| ||||||| ||||| |||||||| |  ||||||| ||||||  |||||||||||||  |   ||||||    
T  34582551 gatattgattttttattcagggactaaagtggacattttctacttttactttagttcatgtgacacctcatacctcttgtcagcataaaacctttgccac 34582650  T
Q  148 atcatcacttaacnnnnnnntttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctat 247  Q
    || |||| || |        ||||||| ||| |||||||||||||||||||||||| | |||| ||||  |||||||||||||| ||||||  || || |    
T  34582651 atgatcagttgatataattatttaacgtcagggactaaagtgataacggaagtgcacattcagggactactttgtatttaatcccgagtcaatgaccttt 34582750  T
Q  248 gtgacagcgaggtgcacagtcagggactaaagtga 282  Q
    || ||||| ||||||| ||||||||||||| ||||    
T  34582751 gtaacagcaaggtgcagagtcagggactaacgtga 34582785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 168 - 248
Target Start/End: Complemental strand, 14704128 - 14704048
Alignment:
Q  168 tttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatg 248  Q
    ||||||| ||| |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||| |||||    
T  14704128 tttaacgtcagggactaaagtgataacggaagtgcagagtgagggacttatttgtatttaatcctgagtcagggacctatg 14704048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 43 - 293
Target Start/End: Original strand, 14887374 - 14887626
Alignment:
Q  43 ttgaagatatcgattttcgattcagggaccaaagtggccattttcgactttcactttagtccccgtgacacgtcatactccttgtcagcataagccaagt 142  Q
    |||| ||||| ||||||  |||||||||||| | || |||||||| ||||||||||||||||| ||||||| ||||||||||||| |||||||  ||  |    
T  14887374 ttgaggatattgatttttaattcagggaccatattgaccattttctactttcactttagtccctgtgacacctcatactccttgttagcataaaacattt 14887473  T
Q  143 gccacatcatcacttaacnnnnnnntttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcaggga 242  Q
    | |||||||||| |||||       |||||||  ||||| ||||||||  | |||| |||| | |||| |  |  ||| | |||||||||||||||||||    
T  14887474 gtcacatcatcagttaacaaaattatttaacgctagagattaaagtgacgatggaattgcacattcagggtatactttatgtttaatcctgagtcaggga 14887573  T
Q  243 tctatgtgacagcgaggtgcacagtcagggactaaagtga--atttactcaaa 293  Q
     ||  |||||||||||||||| |||  ||||| |||||||  |||||||||||    
T  14887574 ccttcgtgacagcgaggtgcagagtttgggaccaaagtgaccatttactcaaa 14887626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 168 - 282
Target Start/End: Original strand, 39016384 - 39016496
Alignment:
Q  168 tttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtc--agggatctatgtgacagcgaggtgcaca 265  Q
    ||||||| ||||||||||||||||||||||||||||||||    ||||||||||||||||||||||||||  || ||| |||||||||||||| |||| |    
T  39016384 tttaacgtcagagactaaagtgataacggaagtgcagagt----gacttatttgtatttaatcctgagtcagagagatgtatgtgacagcgagctgcaga 39016479  T
Q  266 gtcagggactaaagtga 282  Q
     |||| |||||||||||    
T  39016480 atcagagactaaagtga 39016496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 169 - 254
Target Start/End: Complemental strand, 7073760 - 7073675
Alignment:
Q  169 ttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacag 254  Q
    |||||| ||| |||||||||||||||||||||||||| ||||||||||||||||||||||||| || |||| || ||||| |||||    
T  7073760 ttaacgtcagggactaaagtgataacggaagtgcagaatcagagacttatttgtatttaatcccgaatcagagacctatgcgacag 7073675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 187 - 282
Target Start/End: Original strand, 5915012 - 5915107
Alignment:
Q  187 gtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagtga 282  Q
    ||||||||||||||||||||| || ||||| |||||||||||| ||||||||  || |||| ||| ||||||||||| ||||| ||||||||||||    
T  5915012 gtgataacggaagtgcagagttagtgacttctttgtatttaattctgagtcaaagacctatttgaaagcgaggtgcagagtcatggactaaagtga 5915107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 327 - 398
Target Start/End: Complemental strand, 7888643 - 7888572
Alignment:
Q  327 actttttaacttttagaaagttgaattcaacatttttcaccatttttcaagaaattatttctatttatgttc 398  Q
    ||||||| ||||||| ||| || ||||||||| |||||||||||||||||||||||||||||||||||||||    
T  7888643 acttttttacttttataaaattaaattcaacacttttcaccatttttcaagaaattatttctatttatgttc 7888572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 66 - 260
Target Start/End: Complemental strand, 7412316 - 7412122
Alignment:
Q  66 agggaccaaagtggccattttcgactttcactttagtccccgtgacacgtcatactccttgtcagcataagccaagtgccacatcatcacttaacnnnnn 165  Q
    ||||| ||||||| |||||||| | ||||||||||||||  ||||||| |||||  || ||||| | |||  || ||| ||  ||||||||||||         
T  7412316 agggaacaaagtgaccattttctattttcactttagtccttgtgacacatcatatgccatgtcatcgtaaaacatgtgtcatgtcatcacttaacataat 7412217  T
Q  166 nntttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggt 260  Q
      ||||| |  || ||||||||||||||||||||||||   |||| ||||| ||| ||||||||| |||||||| ||||||||||||| ||||||    
T  7412216 tatttaatgttagggactaaagtgataacggaagtgcactatcagtgacttctttatatttaatcttgagtcagagatctatgtgacaacgaggt 7412122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 180 - 281
Target Start/End: Original strand, 38985002 - 38985103
Alignment:
Q  180 gactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaag 279  Q
    ||||||||||||||||||||||||||||||  ||||| |||||||||||| | ||||||   |||| |||||||| |||||||| ||| |||| ||||||    
T  38985002 gactaaagtgataacggaagtgcagagtcaaggacttctttgtatttaattccgagtcataaatctttgtgacagtgaggtgcaaagttaggggctaaag 38985101  T
Q  280 tg 281  Q
    ||    
T  38985102 tg 38985103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 335 - 411
Target Start/End: Original strand, 10824259 - 10824334
Alignment:
Q  335 acttttagaaagttgaattcaacatttttcaccatttttcaagaaattatttctatttatgttcctcttaaccaatg 411  Q
    |||||||||||||| ||||||||||||||||||| ||| ||| ||||||||| |||||||||| |||||||||||||    
T  10824259 acttttagaaagttaaattcaacatttttcaccactttccaacaaattatttttatttatgtt-ctcttaaccaatg 10824334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 54 - 282
Target Start/End: Complemental strand, 38853991 - 38853763
Alignment:
Q  54 gattttcgattcagggaccaaagtggccattttcgactttcactttagtccccgtgacacgtcatactccttgtcagcataagccaagtgccacatcatc 153  Q
    |||||||| |||| ||||||| | | | ||| || ||||||| ||||||||| ||||||| ||||||||||||| |||||||  |   || ||| ||||     
T  38853991 gattttcggttcaaggaccaaggcgactattatctactttcaatttagtccctgtgacacctcatactccttgttagcataaaacttttgtcacgtcatg 38853892  T
Q  154 acttaacnnnnnnntttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgaca 253  Q
    | |||||       ||||||| ||| ||||||| |||||||||||||||| | | || ||||  |||||||||||||||||||||| || || | |||||    
T  38853891 agttaacataattatttaacgtcagtgactaaattgataacggaagtgcacatttagggactactttgtatttaatcctgagtcagagacctttatgaca 38853792  T
Q  254 gcgaggtgcacagtcagggactaaagtga 282  Q
      || ||| | |||||||||| |||||||    
T  38853791 atgaagtgtagagtcagggaccaaagtga 38853763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 55 - 201
Target Start/End: Complemental strand, 26585310 - 26585167
Alignment:
Q  55 attttcgattcagggaccaaagtggccattttcgactttcactttagtccccgtgacacgtcatactccttgtcagcataagccaagtgccacatcatca 154  Q
    ||||||| |||||||||||||||| |||||| | | ||||||||||||||| ||||||| ||||||||||||||| |||||   |  || ||||||||||    
T  26585310 attttcggttcagggaccaaagtgaccattt-ctattttcactttagtccctgtgacacctcatactccttgtcaacataa--aatatgtcacatcatca 26585214  T
Q  155 cttaacnnnnnnntttaacgacagagactaaagtgataacggaagtg 201  Q
     |||||       |||||||  |||||||||||||||||| ||||||    
T  26585213 attaacataattatttaacgctagagactaaagtgataacagaagtg 26585167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 81 - 296
Target Start/End: Original strand, 12746115 - 12746332
Alignment:
Q  81 cattttcgactttcactttagtccccgtgacacgtcatactccttgtcagcataagccaagtgccacatcatcacttaacnnnnnnntttaacgacagag 180  Q
    ||||||| ||||||||||||||||| ||||||| |||||||| ||||||||||||  |   || ||||| ||||||||         ||||||   |  |    
T  12746115 cattttctactttcactttagtccctgtgacacctcatactctttgtcagcataaaacttttgtcacataatcacttactagaattatttaacattatgg 12746214  T
Q  181 actaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagt 280  Q
    ||||||||||||||||||| ||| | ||||  |||  ||||||||||||||||||||||| | || |  ||| |||||||||| ||||| | || |||||    
T  12746215 actaaagtgataacggaagggcacattcaggaactactttgtatttaatcctgagtcaggaacctttaagactgcgaggtgcagagtcaagaaccaaagt 12746314  T
Q  281 ga--atttactcaaacta 296  Q
    ||  ||||||||||||||    
T  12746315 gaccatttactcaaacta 12746332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 337 - 429
Target Start/End: Complemental strand, 803980 - 803889
Alignment:
Q  337 ttttagaaagttgaattcaacatttttcaccatttttcaagaaattatttctatttatgttcctcttaaccaatgcacaaaggacactcttta 429  Q
    ||||||||| |||||||||| | ||||||||| ||||||| ||||||||| |||||||||| |||||||||||||| | || | |||||||||    
T  803980 ttttagaaatttgaattcaatacttttcaccacttttcaacaaattatttttatttatgtt-ctcttaaccaatgctccaatggcactcttta 803889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 146 - 238
Target Start/End: Complemental strand, 17466185 - 17466093
Alignment:
Q  146 acatcatcacttaacnnnnnnntttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtca 238  Q
    |||||||||||||||       ||| ||| ||| ||||||||||| ||||||||||||||||||||||  | |||||||||||||||||||||    
T  17466185 acatcatcacttaacataattgtttcacgtcagggactaaagtgaaaacggaagtgcagagtcagagatatctttgtatttaatcctgagtca 17466093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 181 - 263
Target Start/End: Original strand, 2911505 - 2911587
Alignment:
Q  181 actaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgca 263  Q
    ||||||||||||||||||||||| |||||||||||||||| |||||||   ||||||| ||   |||||||||||||| ||||    
T  2911505 actaaagtgataacggaagtgcaaagtcagagacttatttatatttaactttgagtcatggccttatgtgacagcgagctgca 2911587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 116 - 259
Target Start/End: Original strand, 15441920 - 15442063
Alignment:
Q  116 catactccttgtcagcataagccaagtgccacatcatcacttaacnnnnnnntttaacgacagagactaaagtgataacggaagtgcagagtcagagact 215  Q
    ||||||| ||||||||||||  ||  ||||||||||||| |||||       ||||||   |||||||||||||||||   ||||||| | |||  ||||    
T  15441920 catactctttgtcagcataaaacatttgccacatcatcagttaacaaaattatttaacactagagactaaagtgataataaaagtgcacattcaaggact 15442019  T
Q  216 tatttgtatttaatcctgagtcagggatctatgtgacagcgagg 259  Q
      ||||||||||||||||||||||| |||| |||||||||||||    
T  15442020 actttgtatttaatcctgagtcaggaatctttgtgacagcgagg 15442063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 43 - 119
Target Start/End: Complemental strand, 24458287 - 24458211
Alignment:
Q  43 ttgaagatatcgattttcgattcagggaccaaagtggccattttcgactttcactttagtccccgtgacacgtcata 119  Q
    |||| ||||| |||||| |||| ||||||||||||| |||||||| ||||||||||| ||||| ||||||| |||||    
T  24458287 ttgaggatattgatttttgattgagggaccaaagtgaccattttctactttcactttggtccctgtgacacctcata 24458211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 32765301 - 32765257
Alignment:
Q  1 taactgatagtaagtatgcacagtcagggacctaacagtaagttg 45  Q
    |||||||||||||||||||||||||||||||||||||||| ||||    
T  32765301 taactgatagtaagtatgcacagtcagggacctaacagtaggttg 32765257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 168 - 239
Target Start/End: Original strand, 26586296 - 26586367
Alignment:
Q  168 tttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcag 239  Q
    ||||||| |||||||||||||||||||||||||||| | ||| |||||  ||| ||||||||| ||||||||    
T  26586296 tttaacgccagagactaaagtgataacggaagtgcacattcaaagactactttatatttaatcttgagtcag 26586367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 180 - 239
Target Start/End: Original strand, 31814357 - 31814416
Alignment:
Q  180 gactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcag 239  Q
    |||||||||||||||||||||||||||||| | |||| ||| |||||||| |||||||||    
T  31814357 gactaaagtgataacggaagtgcagagtcaaaaacttctttatatttaattctgagtcag 31814416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 181 - 271
Target Start/End: Complemental strand, 21732216 - 21732131
Alignment:
Q  181 actaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagg 271  Q
    |||||||| ||||||||||| ||||||||   |||||||||||||||||||||||||  ||| || ||||| | ||||||||| |||||||    
T  21732216 actaaagtaataacggaagtacagagtca---acttatttgtatttaatcctgagtc--ggacctttgtgataacgaggtgcaaagtcagg 21732131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 2910464 - 2910420
Alignment:
Q  1 taactgatagtaagtatgcacagtcagggacctaacagtaagttg 45  Q
    ||||||||| |||||||||||||||||||||||||||||| ||||    
T  2910464 taactgatattaagtatgcacagtcagggacctaacagtaggttg 2910420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 182 - 270
Target Start/End: Complemental strand, 5914412 - 5914324
Alignment:
Q  182 ctaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcag 270  Q
    ||||||||||||||| |||||| |||||  ||||| ||||||||||||  |||||||| || |||| | ||| ||||||||| ||||||    
T  5914412 ctaaagtgataacgggagtgcaaagtcactgacttctttgtatttaattgtgagtcagagacctatatcacaacgaggtgcaaagtcag 5914324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 63 - 135
Target Start/End: Original strand, 18676719 - 18676791
Alignment:
Q  63 ttcagggaccaaagtggccattttcgactttcactttagtccccgtgacacgtcatactccttgtcagcataa 135  Q
    |||||||||||||||| |||||||| |||||| |||||||| |  |||||  |||||||||||||| ||||||    
T  18676719 ttcagggaccaaagtgaccattttctactttcgctttagtctctttgacatttcatactccttgtcggcataa 18676791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 63 - 111
Target Start/End: Complemental strand, 21732322 - 21732274
Alignment:
Q  63 ttcagggaccaaagtggccattttcgactttcactttagtccccgtgac 111  Q
    |||||||||||||||| |||||||| ||||||||||||||||| |||||    
T  21732322 ttcagggaccaaagtgaccattttctactttcactttagtcccggtgac 21732274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 24459214 - 24459258
Alignment:
Q  1 taactgatagtaagtatgcacagtcagggacctaacagtaagttg 45  Q
    ||||||||||||||||||| |||| ||||||||||||||||||||    
T  24459214 taactgatagtaagtatgcgcagttagggacctaacagtaagttg 24459258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 32766040 - 32766084
Alignment:
Q  1 taactgatagtaagtatgcacagtcagggacctaacagtaagttg 45  Q
    ||||||||||||||||||||||||||| ||||||||| |||||||    
T  32766040 taactgatagtaagtatgcacagtcagagacctaacaataagttg 32766084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 48 - 119
Target Start/End: Original strand, 17330120 - 17330191
Alignment:
Q  48 gatatcgattttcgattcagggaccaaagtggccattttcgactttcactttagtccccgtgacacgtcata 119  Q
    ||||| |||||| | |||||||||||||||| |||||||  ||||||||||||||| | ||||||| |||||    
T  17330120 gatattgattttgggttcagggaccaaagtgaccattttttactttcactttagtctctgtgacacctcata 17330191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 48 - 119
Target Start/End: Complemental strand, 32765159 - 32765088
Alignment:
Q  48 gatatcgattttcgattcagggaccaaagtggccattttcgactttcactttagtccccgtgacacgtcata 119  Q
    ||||| |||||| | |||||||||||||| | |||||||| |||||||||||||||||  |||||| |||||    
T  32765159 gatattgatttttggttcagggaccaaagcgaccattttctactttcactttagtccctatgacacctcata 32765088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 48 - 119
Target Start/End: Complemental strand, 43380809 - 43380738
Alignment:
Q  48 gatatcgattttcgattcagggaccaaagtggccattttcgactttcactttagtccccgtgacacgtcata 119  Q
    ||||| |||||| | |||||||||||||||| |||||||| |||||||||||||| |  ||||||| |||||    
T  43380809 gatattgatttttggttcagggaccaaagtgaccattttctactttcactttagttcatgtgacacctcata 43380738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 327 - 373
Target Start/End: Original strand, 445602 - 445648
Alignment:
Q  327 actttttaacttttagaaagttgaattcaacatttttcaccattttt 373  Q
    ||||||| |||||||| ||||||||||||||| ||||||||||||||    
T  445602 actttttgacttttaggaagttgaattcaacacttttcaccattttt 445648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 180 - 282
Target Start/End: Complemental strand, 8420123 - 8420021
Alignment:
Q  180 gactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaag 279  Q
    ||||||| ||||||| |||||||| | |||| ||||  ||||||||||||| ||| |||||||  | |||||| ||||  |||| |||||||||| ||||    
T  8420123 gactaaactgataacagaagtgcacattcagggactactttgtatttaatcttgactcagggacatttgtgaccgcgaaatgcagagtcagggaccaaag 8420024  T
Q  280 tga 282  Q
    |||    
T  8420023 tga 8420021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 180 - 258
Target Start/End: Complemental strand, 33161877 - 33161799
Alignment:
Q  180 gactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgag 258  Q
    ||||||||||||||||||||| || |||| ||||||| |||| |||||||||| || ||| || || ||||||| ||||    
T  33161877 gactaaagtgataacggaagtacatagtctgagacttctttgcatttaatcctaaggcagagacctttgtgacaacgag 33161799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 48 - 203
Target Start/End: Complemental strand, 37607344 - 37607189
Alignment:
Q  48 gatatcgattttcgattcagggaccaaagtggccattttcgactttcactttagtccccgtgacacgtcatactccttgtcagcataagccaagtgccac 147  Q
    ||||| |||||| | ||||| |||||||||| | |||||| || |||||||||||||  ||||||  ||||||| ||||| |||||||  |   || |||    
T  37607344 gatattgatttttggttcagagaccaaagtgactattttctacgttcactttagtccttgtgacatctcatacttcttgttagcataaaacctttgtcac 37607245  T
Q  148 atcatcacttaacnnnnnnntttaacgacagagactaaagtgataacggaagtgca 203  Q
     |||||| |||||       | ||||| ||| ||||||||||||||||||||||||    
T  37607244 gtcatcagttaacataattatataacgtcagggactaaagtgataacggaagtgca 37607189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 135
Target Start/End: Complemental strand, 38855025 - 38854944
Alignment:
Q  54 gattttcgattcagggaccaaagtggccattttcgactttcactttagtccccgtgacacgtcatactccttgtcagcataa 135  Q
    |||||||| |||| ||||||| ||| | ||| || ||||||| ||||| ||| ||||||| ||||||||||||| |||||||    
T  38855025 gattttcggttcaaggaccaaggtgactattatctactttcaatttagcccctgtgacacctcatactccttgttagcataa 38854944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 2911248 - 2911291
Alignment:
Q  1 taactgatagtaagtatgcacagtcagggacctaacagtaagttg 45  Q
    ||||||||| ||||||||||||||||| |||||||||||||||||    
T  2911248 taactgata-taagtatgcacagtcagagacctaacagtaagttg 2911291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 327 - 411
Target Start/End: Complemental strand, 6975919 - 6975837
Alignment:
Q  327 actttttaacttttagaaagttgaattcaacatttttcaccatttttcaagaaattatttctatttatgttcctcttaaccaatg 411  Q
    |||||| ||||| |||| ||||||||||||||||||||||||  |||||| | ||||||| ||||| |||| |||||| ||||||    
T  6975919 acttttaaacttctagagagttgaattcaacatttttcacca-ctttcaacatattatttttatttttgtt-ctcttagccaatg 6975837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 18675488 - 18675452
Alignment:
Q  1 taactgatagtaagtatgcacagtcagggacctaaca 37  Q
    |||||||||||||||||||||||||||| ||||||||    
T  18675488 taactgatagtaagtatgcacagtcaggaacctaaca 18675452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 24458424 - 24458380
Alignment:
Q  1 taactgatagtaagtatgcacagtcagggacctaacagtaagttg 45  Q
    |||||||||||||||||||||||| || |||||||||||| ||||    
T  24458424 taactgatagtaagtatgcacagtaagagacctaacagtaggttg 24458380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 31091287 - 31091331
Alignment:
Q  1 taactgatagtaagtatgcacagtcagggacctaacagtaagttg 45  Q
    ||||||||||||||||||| ||||||| || ||||||||||||||    
T  31091287 taactgatagtaagtatgcgcagtcagagatctaacagtaagttg 31091331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 104
Target Start/End: Complemental strand, 31442573 - 31442517
Alignment:
Q  48 gatatcgattttcgattcagggaccaaagtggccattttcgactttcactttagtcc 104  Q
    ||||| |||||||| |||||||||||| |||  |||||| |||||||||||||||||    
T  31442573 gatattgattttcggttcagggaccaatgtgttcatttttgactttcactttagtcc 31442517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 282
Target Start/End: Original strand, 33163462 - 33163574
Alignment:
Q  171 aacgacagagactaaagtgataacggaagtgcagagtcagagac-ttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtca 269  Q
    |||| ||||||||||||||||||||||| |||| ||||| | || || ||||||||||||  |||||||| || || || |||| || |||| | |||||    
T  33163462 aacgtcagagactaaagtgataacggaaatgcatagtcaaatactttttttgtatttaattatgagtcagagaactttgcgacaacgtggtgtagagtca 33163561  T
Q  270 gggactaaagtga 282  Q
      |||||||||||    
T  33163562 aagactaaagtga 33163574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 38855960 - 38855996
Alignment:
Q  1 taactgatagtaagtatgcacagtcagggacctaaca 37  Q
    ||||||||||||||||||||| |||||||||||||||    
T  38855960 taactgatagtaagtatgcactgtcagggacctaaca 38855996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 39256773 - 39256817
Alignment:
Q  1 taactgatagtaagtatgcacagtcagggacctaacagtaagttg 45  Q
    ||||| |||||||||||||||| |||| |||||||||||||||||    
T  39256773 taactaatagtaagtatgcacaatcagcgacctaacagtaagttg 39256817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 119
Target Start/End: Complemental strand, 14704227 - 14704156
Alignment:
Q  48 gatatcgattttcgattcagggaccaaagtggccattttcgactttcactttagtccccgtgacacgtcata 119  Q
    ||||| |||||| | |||| ||||||||||| | |||||| ||||||||||| ||||| ||||||| |||||    
T  14704227 gatattgatttttggttcatggaccaaagtgactattttctactttcactttggtccctgtgacacctcata 14704156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 110
Target Start/End: Complemental strand, 31090364 - 31090317
Alignment:
Q  63 ttcagggaccaaagtggccattttcgactttcactttagtccccgtga 110  Q
    |||||||||||||| |||||||||| ||||||||||| ||||| ||||    
T  31090364 ttcagggaccaaagcggccattttctactttcactttggtccctgtga 31090317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 118
Target Start/End: Original strand, 31443125 - 31443196
Alignment:
Q  47 agatatcgattttcgattcagggaccaaagtggccattttcgactttcactttagtccccgtgacacgtcat 118  Q
    |||||| |||||||| |||||| |||||| || | |||||| ||||||||||||||| | ||||||| ||||    
T  31443125 agatattgattttcggttcaggaaccaaaatgacaattttctactttcactttagtcactgtgacacctcat 31443196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 49 - 119
Target Start/End: Original strand, 24459356 - 24459426
Alignment:
Q  49 atatcgattttcgattcagggaccaaagtggccattttcgactttcactttagtccccgtgacacgtcata 119  Q
    |||| |||||| | |||||||| ||||||| |||||||| ||||||||||| |||||  |||||| |||||    
T  24459356 atattgatttttggttcagggatcaaagtgaccattttctactttcactttggtccctatgacacctcata 24459426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 330 - 376
Target Start/End: Original strand, 33726405 - 33726451
Alignment:
Q  330 ttttaacttttagaaagttgaattcaacatttttcaccatttttcaa 376  Q
    ||||||||||||||||||| |||| |  |||||||||||||||||||    
T  33726405 ttttaacttttagaaagttaaatttattatttttcaccatttttcaa 33726451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 49 - 119
Target Start/End: Complemental strand, 39015226 - 39015156
Alignment:
Q  49 atatcgattttcgattcagggaccaaagtggccattttcgactttcactttagtccccgtgacacgtcata 119  Q
    |||| |||||| | |||| |||||||| || |||||||| ||||||||||| ||||| ||||||| |||||    
T  39015226 atattgatttttggttcaaggaccaaactgaccattttctactttcactttggtccctgtgacacctcata 39015156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 49 - 119
Target Start/End: Original strand, 39016285 - 39016355
Alignment:
Q  49 atatcgattttcgattcagggaccaaagtggccattttcgactttcactttagtccccgtgacacgtcata 119  Q
    |||| |||||| | |||||||||||||||| | |||||| ||||||||||| ||||  ||||||| |||||    
T  39016285 atattgatttttggttcagggaccaaagtgacaattttctactttcactttggtccatgtgacacctcata 39016355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 330 - 375
Target Start/End: Original strand, 2239607 - 2239652
Alignment:
Q  330 ttttaacttttagaaagttgaattcaacatttttcaccatttttca 375  Q
    |||||||||||| |||||| |||||| ||||||| |||||||||||    
T  2239607 ttttaacttttaaaaagttaaattcatcattttttaccatttttca 2239652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 261
Target Start/End: Complemental strand, 11985801 - 11985720
Alignment:
Q  180 gactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtg 261  Q
    ||||||| |||||||| || ||||   |||||||||  |||||||||||||||||||||| || || | | |||||||||||    
T  11985801 gactaaactgataacgaaaatgcaccttcagagactactttgtatttaatcctgagtcagagacctttataacagcgaggtg 11985720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 93; Significance: 8e-45; HSPs: 57)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 1 - 263
Target Start/End: Original strand, 41754640 - 41754891
Alignment:
Q  1 taactgatagtaagtatgcacagtcagggacctaacagtaagttgaagatatcgattttcgattcagggaccaaagtggccattttcgactttcacttta 100  Q
    ||||||| | ||||||| || |||| |||| |||||||||| |||  ||||| ||||||||||||| ||||||||||| |||||||  ||||||||||||    
T  41754640 taactgacaataagtatacatagtcggggatctaacagtaaattgttgatattgattttcgattcatggaccaaagtgaccattttttactttcacttta 41754739  T
Q  101 gtccccgtgacacgtcatactccttgtcagcataagccaagtgccacatcatcacttaacnnnnnnntttaacgacagagactaaagtgataacggaagt 200  Q
     |||| ||||||| |||||||||||||||         | ||||||||||||||||||||       ||||||| ||| | ||||||| |||||||||||    
T  41754740 atccctgtgacacatcatactccttgtca---------acgtgccacatcatcacttaac-agtttttttaacggcag-ggctaaagtaataacggaagt 41754828  T
Q  201 gcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgca 263  Q
    | ||||||||  |||| |||||||||||||||||||||| |||||||||||||||||||||||    
T  41754829 gtagagtcaggaacttgtttgtatttaatcctgagtcagagatctatgtgacagcgaggtgca 41754891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 143 - 282
Target Start/End: Original strand, 32898421 - 32898560
Alignment:
Q  143 gccacatcatcacttaacnnnnnnntttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcaggga 242  Q
    ||||||||||||||||||       ||||||| ||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||    
T  32898421 gccacatcatcacttaacagatttttttaacgtcagggactaaagtgataacggaagtgcagagtcagggacttatttgtatttaatcctaagtcaggga 32898520  T
Q  243 tctatgtgacagcgaggtgcacagtcagggactaaagtga 282  Q
     ||||||||||| ||| |||| ||||||||||||||||||    
T  32898521 cctatgtgacagtgagttgcagagtcagggactaaagtga 32898560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 49 - 234
Target Start/End: Complemental strand, 45476403 - 45476218
Alignment:
Q  49 atatcgattttcgattcagggaccaaagtggccattttcgactttcactttagtccccgtgacacgtcatactccttgtcagcataagccaagtgccaca 148  Q
    |||| |||||| | |||||||||||||||| | |||||| ||||||||||| ||| | ||||||| || || |||| ||||||||||  || | ||||||    
T  45476403 atattgatttttggttcagggaccaaagtgacaattttctactttcactttggtctctgtgacacctcttaatcctcgtcagcataacacatgcgccaca 45476304  T
Q  149 tcatcacttaacnnnnnnntttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctga 234  Q
    ||||||||||||       |||||||  |||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  45476303 tcatcacttaacagatttttttaacgggagagactaaagtgataacagaagtgcagagtcagagacttatttgtatttaattctga 45476218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 143 - 278
Target Start/End: Complemental strand, 35177542 - 35177407
Alignment:
Q  143 gccacatcatcacttaacnnnnnnntttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcaggga 242  Q
    ||||||||||||||||||       ||||||| ||| ||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  35177542 gccacatcatcacttaacagattattttaacgtcagggactaaagtgataacggaagtgcagagtcagggacttatttgtatttaatccggagtcaggga 35177443  T
Q  243 tctatgtgacagcgaggtgcacagtcagggactaaa 278  Q
     ||||||||||||||| |||| | | ||||||||||    
T  35177442 cctatgtgacagcgagctgcagaattagggactaaa 35177407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 41754257 - 41754127
Alignment:
Q  1 taactgatagtaagtatgcacagtcagggacctaacagtaagttgaagatatcgattttcgattcagggaccaaagtggccattttcgactttcacttta 100  Q
    ||||||| ||||||||| |||||||||| | |||||||||| |||| ||||| ||||||||||||||||||||||||| | |||||  ||||||||||||    
T  41754257 taactgagagtaagtatacacagtcaggtatctaacagtaaattgaggatattgattttcgattcagggaccaaagtgactattttttactttcacttta 41754158  T
Q  101 gtccccgtgacacgtcatactccttgtcagc 131  Q
    |||||  ||||||||||||||||||||||||    
T  41754157 gtccctatgacacgtcatactccttgtcagc 41754127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 168 - 282
Target Start/End: Original strand, 35178805 - 35178919
Alignment:
Q  168 tttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagt 267  Q
    ||||||| ||| |||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| | || ||||||||| ||||| |||    
T  35178805 tttaacgtcagggactaaagtgataacggaagtgcagaatcagggacttatttgtatttaatcctgagtcagggaccaatatgacagcgatgtgcagagt 35178904  T
Q  268 cagggactaaagtga 282  Q
    ||||||| |||||||    
T  35178905 cagggaccaaagtga 35178919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 49 - 220
Target Start/End: Original strand, 45476445 - 45476616
Alignment:
Q  49 atatcgattttcgattcagggaccaaagtggccattttcgactttcactttagtccccgtgacacgtcatactccttgtcagcataagccaagtgccaca 148  Q
    |||| |||||| | ||||||||| |||||| |||||||| ||||| ||||| ||||   |||||| ||||||| |||||||||||||| || | ||||||    
T  45476445 atattgatttttggttcagggactaaagtgaccattttctacttttactttggtccatatgacacatcatacttcttgtcagcataagacatgcgccaca 45476544  T
Q  149 tcatcacttaacnnnnnnntttaacgacagagactaaagtgataacggaagtgcagagtcagagacttattt 220  Q
    ||||||||||||       ||||||||||||||||||||||||||  ||||||||||||||| |||||||||    
T  45476545 tcatcacttaacatatttttttaacgacagagactaaagtgataagagaagtgcagagtcagcgacttattt 45476616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 64 - 280
Target Start/End: Complemental strand, 31074220 - 31074004
Alignment:
Q  64 tcagggaccaaagtggccattttcgactttcactttagtccccgtgacacgtcatactccttgtcagcataagccaagtgccacatcatcacttaacnnn 163  Q
    |||||||||||||||  ||||||| | ||||||||||||||||||||||| |||||| |||||| |||||||  ||  ||||||||||||| |||||       
T  31074220 tcagggaccaaagtgatcattttctattttcactttagtccccgtgacacctcataccccttgttagcataaaacatttgccacatcatcagttaacaaa 31074121  T
Q  164 nnnntttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgca 263  Q
        |||||   ||||||||||||||||||| |||||||| | ||||| |||  |||| ||||||||| ||||||| ||  | ||||||||| || ||||    
T  31074120 attatttaattccagagactaaagtgataacagaagtgcacattcagaaactactttgcatttaatccagagtcagagacttttgtgacagcaagatgca 31074021  T
Q  264 cagtcagggactaaagt 280  Q
     ||||||||| ||||||    
T  31074020 gagtcagggattaaagt 31074004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 143 - 282
Target Start/End: Original strand, 1952946 - 1953084
Alignment:
Q  143 gccacatcatcacttaacnnnnnnntttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcaggga 242  Q
    ||||||||||||||||||       ||||||| ||||||||||||||||||||||||| |||||||| |||||||||||||| ||||||| |||||| ||    
T  1952946 gccacatcatcacttaacagatttatttaacgtcagagactaaagtgataacggaagtacagagtcatagacttatttgtatgtaatcct-agtcagaga 1953044  T
Q  243 tctatgtgacagcgaggtgcacagtcagggactaaagtga 282  Q
    ||||| ||||| |||| |||| | ||||||||||||||||    
T  1953045 tctatatgacaacgagctgcagaatcagggactaaagtga 1953084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 168 - 261
Target Start/End: Original strand, 5965443 - 5965536
Alignment:
Q  168 tttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtg 261  Q
    ||||||| |||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||  | ||||||| |||||||    
T  5965443 tttaacgtcagagactaaagtgataacggaagtgcagagtcaaagacttctttgtatttaatcctgagtcagggacatttgtgacaacgaggtg 5965536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 48 - 282
Target Start/End: Original strand, 5737904 - 5738138
Alignment:
Q  48 gatatcgattttcgattcagggaccaaagtggccattttcgactttcactttagtccccgtgacacgtcatactccttgtcagcataagccaagtgccac 147  Q
    ||||| |||||| |||| || |||||||||| |||||||  ||||| ||||||||||  ||||||| |||||   | ||||| ||||  ||| |||  ||    
T  5737904 gatattgatttttgatttagagaccaaagtgaccattttttacttttactttagtccatgtgacacctcatatgtcatgtcatcatataccatgtgttac 5738003  T
Q  148 atcatcacttaacnnnnnnntttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctat 247  Q
    |||||||||||||       ||||||| || ||||| |||||||||||||||| ||||||||   |||| ||||||||||||| ||||||| ||| ||||    
T  5738004 atcatcacttaacagaattatttaacgccaaagactgaagtgataacggaagtacagagtcaataacttctttgtatttaatcttgagtcatggacctat 5738103  T
Q  248 gtgacagcgaggtgcacagtcagggactaaagtga 282  Q
    || ||| |||  |||| ||||||| ||||||||||    
T  5738104 gtcacaacgatatgcaaagtcaggaactaaagtga 5738138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 55 - 279
Target Start/End: Complemental strand, 33315093 - 33314872
Alignment:
Q  55 attttcgattcagggaccaaagtggccattttcgactttcactttagtccccgtgacacgtcatactccttgtcagcataagccaagtgccacatcatca 154  Q
    |||||| ||||| ||||||||||| | |||||| ||||||||||| ||||  ||||||| |||||||||||||||||| ||  || ||| ||| ||||||    
T  33315093 attttcaattcacggaccaaagtgactattttctactttcactttggtccatgtgacacctcatactccttgtcagcaaaaaacatgtgtcacttcatca 33314994  T
Q  155 cttaacnnnnnnntttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacag 254  Q
    ||||||       ||||   ||||  |||||||||||||| |||||  ||| ||   ||||||||||||||||||| |||||||| || || || |||||    
T  33314993 cttaacagaatttttta---acagcaactaaagtgataaccgaagtatagaatcgatgacttatttgtatttaatcttgagtcagagacctttgagacag 33314897  T
Q  255 cgaggtgcacagtcagggactaaag 279  Q
    ||||||||| ||| |||||| ||||    
T  33314896 cgaggtgcaaagtaagggaccaaag 33314872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 318 - 411
Target Start/End: Original strand, 43819551 - 43819643
Alignment:
Q  318 gaaattattactttttaacttttagaaagttgaattcaacatttttcaccatttttcaagaaattatttctatttatgttcctcttaaccaatg 411  Q
    |||||||  ||||||| ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||| ||||| |||||||||||||    
T  43819551 gaaattacaactttttgacttttagaaagttgaattcaacatttttcatcatttttcaacaaattatttctattcatgtt-ctcttaaccaatg 43819643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 291 - 409
Target Start/End: Original strand, 7207194 - 7207310
Alignment:
Q  291 aaactaaaagtaataattttgcacccggaaattattactttttaacttttagaaagttgaattcaacatttttcaccatttttcaagaaattatttctat 390  Q
    |||||||||||| ||||||||||   |||| |||  ||||||||||||||||||| |||||||||||| |||||| |||||||||| ||||||||| |||    
T  7207194 aaactaaaagtagtaattttgcattgggaa-ttacaactttttaacttttagaaatttgaattcaacacttttcatcatttttcaacaaattatttatat 7207292  T
Q  391 ttatgttcctcttaaccaa 409  Q
    ||||||| |||||||||||    
T  7207293 ttatgtt-ctcttaaccaa 7207310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 327 - 429
Target Start/End: Original strand, 24066973 - 24067074
Alignment:
Q  327 actttttaacttttagaaagttgaattcaacatttttcaccatttttcaagaaattatttctatttatgttcctcttaaccaatgcacaaaggacactct 426  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||  ||| ||||||||| ||||||||||  ||||||| ||||| | |||||||||||    
T  24066973 actttttaacttttagaaggttgaattcaacacttttcaccatttcccaacaaattatttatatttatgtt-ttcttaacaaatgccccaaggacactct 24067071  T
Q  427 tta 429  Q
    |||    
T  24067072 tta 24067074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 68 - 282
Target Start/End: Complemental strand, 30134788 - 30134574
Alignment:
Q  68 ggaccaaagtggccattttcgactttcactttagtccccgtgacacgtcatactccttgtcagcataagccaagtgccacatcatcacttaacnnnnnnn 167  Q
    ||||||||||| | |||||| ||||||||||||||| | ||||||| ||| |   | ||||| | |||  || ||| ||||||||||| ||||           
T  30134788 ggaccaaagtgacaattttctactttcactttagtctctgtgacacatcaaatgacatgtcatcgtaaaacatgtgtcacatcatcacctaacataatta 30134689  T
Q  168 tttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagt 267  Q
    | |||||  ||| | |||||||||||| |||||||||||||| | |||| ||||||||||||| |||||  |||| || ||||||||||||||||| |||    
T  30134688 tataacgttagatattaaagtgataacagaagtgcagagtcacacacttctttgtatttaatcatgagtaggggacctttgtgacagcgaggtgcagagt 30134589  T
Q  268 cagggactaaagtga 282  Q
     | ||||||||||||    
T  30134588 taaggactaaagtga 30134574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 191 - 282
Target Start/End: Complemental strand, 41754097 - 41754006
Alignment:
Q  191 taacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagtga 282  Q
    ||||| ||||| |||||||| ||||| ||| ||||||||||||||||||||| |||||||||||| ||||||| |  |||||||||||||||    
T  41754097 taacgaaagtgtagagtcagggacttgtttatatttaatcctgagtcagggacctatgtgacagcaaggtgcagaaccagggactaaagtga 41754006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 48 - 238
Target Start/End: Complemental strand, 28525000 - 28524810
Alignment:
Q  48 gatatcgattttcgattcagggaccaaagtggccattttcgactttcactttagtccccgtgacacgtcatactccttgtcagcataagccaagtgccac 147  Q
    ||||| |||||||| |||| |||||||| || | |||||  ||||||||||||||||   |||||| |||||||| |||||| |||||      ||||||    
T  28525000 gatattgattttcggttcacggaccaaaatgacaattttttactttcactttagtccatctgacacttcatactctttgtcaacataaaatctttgccac 28524901  T
Q  148 atcatcacttaacnnnnnnntttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtca 238  Q
    ||||||| |||||       ||||||| ||||||||||| |||||||||||||||| | |||  || |  |||||||||||||||||||||    
T  28524900 atcatcagttaacaaaattatttaacgtcagagactaaaatgataacggaagtgcacattcaaggattactttgtatttaatcctgagtca 28524810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 145 - 282
Target Start/End: Original strand, 10407562 - 10407699
Alignment:
Q  145 cacatcatcacttaacnnnnnnntttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatc 244  Q
    ||||||||||||||||       ||||||| |||  ||||||||||||||||||||||| ||| |  ||||||||||| ||||||||| |||||  || |    
T  10407562 cacatcatcacttaacagatttttttaacgtcaggaactaaagtgataacggaagtgcaaagttatggacttatttgtgtttaatcctaagtcaatgacc 10407661  T
Q  245 tatgtgacagcgaggtgcacagtcagggactaaagtga 282  Q
    |||||||||| ||| |||| | |||| |||||||||||    
T  10407662 tatgtgacagtgagctgcagaatcagagactaaagtga 10407699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 335 - 429
Target Start/End: Original strand, 617525 - 617617
Alignment:
Q  335 acttttagaaagttgaattcaacatttttcaccatttttcaagaaattatttctatttatgttcctcttaaccaatgcacaaaggacactcttta 429  Q
    ||||||||||||||||||| ||||||| ||||||||||| || ||||||||| |||||||||| |||||||| ||||  | ||||||||||||||    
T  617525 acttttagaaagttgaatt-aacatttctcaccattttttaacaaattatttttatttatgtt-ctcttaacgaatgttccaaggacactcttta 617617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 335 - 429
Target Start/End: Original strand, 623918 - 624010
Alignment:
Q  335 acttttagaaagttgaattcaacatttttcaccatttttcaagaaattatttctatttatgttcctcttaaccaatgcacaaaggacactcttta 429  Q
    ||||||||||||||||||| ||||||| ||||||||||| || ||||||||| |||||||||| |||||||| ||||  | ||||||||||||||    
T  623918 acttttagaaagttgaatt-aacatttctcaccattttttaacaaattatttttatttatgtt-ctcttaacgaatgttccaaggacactcttta 624010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 61 - 251
Target Start/End: Complemental strand, 28619219 - 28619028
Alignment:
Q  61 gattcagggaccaaagtggccatttt-cgactttcactttagtccccgtgacacgtcatactccttgtcagcataagccaagtgccacatcatcacttaa 159  Q
    |||| ||||||||||||| ||||||| | || ||||||||||||||  ||| || ||| |  || ||||| | |||  || ||| |||||||||||||||    
T  28619219 gattgagggaccaaagtgaccatttttctacattcactttagtccctatgatacatcaaatgccatgtcatcgtaaaacatgtgacacatcatcacttaa 28619120  T
Q  160 cnnnnnnntttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtga 251  Q
    |       ||||||| | |||||||||||||||||| |||||||||||||  || || ||||||||||||| || |||||||| || |||||    
T  28619119 caaaattatttaacggccgagactaaagtgataacgaaagtgcagagtcaatgatttctttgtatttaatcatgggtcagggacctttgtga 28619028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 327 - 429
Target Start/End: Original strand, 42542994 - 42543095
Alignment:
Q  327 actttttaacttttagaaagttgaattcaacatttttcaccatttttcaagaaattatttctatttatgttcctcttaaccaatgcacaaaggacactct 426  Q
    ||||||| ||||||||| |||||||||||||| ||||||| |||||| || ||||| ||| ||||||||||| | ||||||||||| | |||| ||||||    
T  42542994 acttttttacttttagagagttgaattcaacacttttcactatttttaaacaaattgtttttatttatgttcat-ttaaccaatgccccaagggcactct 42543092  T
Q  427 tta 429  Q
    |||    
T  42543093 tta 42543095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 41754568 - 41754639
Alignment:
Q  1 taactgatagtaagtatgcacagtcagggacctaacagtaagttgaagatatcgattttcgattcagggacc 72  Q
    ||||||| |||||||||  | |||||||||||||| |||||||||| ||||| |||||||||||||||||||    
T  41754568 taactgacagtaagtatatatagtcagggacctaaaagtaagttgaggatattgattttcgattcagggacc 41754639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 176 - 242
Target Start/End: Original strand, 28619554 - 28619620
Alignment:
Q  176 cagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcaggga 242  Q
    ||||||||||||||||||  ||||||||||||||  ||| | |||||||||||||||||||||||||    
T  28619554 cagagactaaagtgataatagaagtgcagagtcaatgacctctttgtatttaatcctgagtcaggga 28619620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 187 - 263
Target Start/End: Complemental strand, 1952045 - 1951970
Alignment:
Q  187 gtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgca 263  Q
    ||||||| | || |||||||||||| |||||||||||||||||||||||||| |||||||||| | ||| |||||||    
T  1952045 gtgataatgaaaatgcagagtcagaaacttatttgtatttaatcctgagtca-ggatctatgtaatagcaaggtgca 1951970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 10406554 - 10406510
Alignment:
Q  1 taactgatagtaagtatgcacagtcagggacctaacagtaagttg 45  Q
    ||||||||||||||||||||||||||||||||||||| |||||||    
T  10406554 taactgatagtaagtatgcacagtcagggacctaacaataagttg 10406510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 56 - 258
Target Start/End: Complemental strand, 24199164 - 24198966
Alignment:
Q  56 ttttcgattcagggaccaaagtggccattttcgactttcactttagtccccgtgacacgtcatactccttgtcagcataagccaagtgccacatcatcac 155  Q
    |||||||||||||||||||| ||  ||||||  ||||||||||||||  | ||||||| |||||| ||||||||||||||  ||  ||| || |||||      
T  24199164 ttttcgattcagggaccaaaatgatcattttttactttcactttagtatctgtgacacctcataccccttgtcagcataaaacatttgctacgtcatc-- 24199067  T
Q  156 ttaacnnnnnnntttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagc 255  Q
      |||       || ||||| | ||||||||||||||||||||||||| | |||  || |  ||||||||||||||||| |||  || || |||||||||    
T  24199066 --aacataattattcaacgaaaaagactaaagtgataacggaagtgcacattcaatgattactttgtatttaatcctgaatcaaagacctttgtgacagc 24198969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 342 - 429
Target Start/End: Complemental strand, 589998 - 589913
Alignment:
Q  342 gaaagttgaattcaacatttttcaccatttttcaagaaattatttctatttatgttcctcttaaccaatgcacaaaggacactcttta 429  Q
    |||||||||||| ||||||| ||||||||||| || ||||||||| |||||||||| |||||||| ||||  | ||||||||||||||    
T  589998 gaaagttgaatt-aacatttctcaccattttttaacaaattatttttatttatgtt-ctcttaacgaatgttccaaggacactcttta 589913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 145 - 253
Target Start/End: Complemental strand, 5736987 - 5736879
Alignment:
Q  145 cacatcatcacttaacnnnnnnntttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatc 244  Q
    ||||||||||||||||       |||||||  || |||||||||||||||| ||||| ||||| ||||| || |||||||||||| |||| |||| |||     
T  5736987 cacatcatcacttaacaaaattatttaacgtgagggactaaagtgataacgaaagtgtagagttagagatttctttgtatttaattctgaatcagagatt 5736888  T
Q  245 tatgtgaca 253  Q
    |||||||||    
T  5736887 tatgtgaca 5736879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 54 - 242
Target Start/End: Original strand, 12637648 - 12637833
Alignment:
Q  54 gattttcgattcagggaccaaagtggccattttcgactttcactttagtccccgtgacacgtcatactccttgtcagcataagccaagtgccacatcatc 153  Q
    |||||||  ||||||||||||||||  ||| ||| ||||||||||||||||  ||||||| ||||||||||||| || ||||  |   ||||||||||||    
T  12637648 gattttcagttcagggaccaaagtgatcatattctactttcactttagtccatgtgacacatcatactccttgttagtataaaacctttgccacatcatc 12637747  T
Q  154 acttaacnnnnnnntttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcaggga 242  Q
    | || |        ||||| | | | |||||||||||||||||||||||| | ||||  |||  |||||||| |||||||||| |||||    
T  12637748 agttga---aaatatttaatgtcggggactaaagtgataacggaagtgcacattcaggaactactttgtattcaatcctgagttaggga 12637833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 48 - 270
Target Start/End: Original strand, 31075172 - 31075392
Alignment:
Q  48 gatatcgattttcgattcagggaccaaagtggccattttcgactttcactttagtccccgtgacacgtcatactccttgtcagcataagccaagtgccac 147  Q
    ||||| |||||||  |||||||||||||||| ||| |||| ||||||| ||||||||  ||||||| || |||||||||||| |||||  |   || |||    
T  31075172 gatattgattttcagttcagggaccaaagtgaccactttctactttca-tttagtccttgtgacacctcgtactccttgtcaccataaaacctttgtcac 31075270  T
Q  148 atcatcacttaacnnnnnnntttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctat 247  Q
     |||||| ||||        ||||||| ||| ||||||||||||||||| ||| || | |||| ||||  |||||||||||| ||||| || | | || |    
T  31075271 gtcatcagttaatataattatttaacgtcagtgactaaagtgataacgggagtacatattcag-gactattttgtatttaatgctgagccaagaaccttt 31075369  T
Q  248 gtgacagcgaggtgcacagtcag 270  Q
    || ||| ||||||||| ||||||    
T  31075370 gtaacaacgaggtgcagagtcag 31075392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 55 - 135
Target Start/End: Original strand, 9626349 - 9626429
Alignment:
Q  55 attttcgattcagggaccaaagtggccattttcgactttcactttagtccccgtgacacgtcatactccttgtcagcataa 135  Q
    ||||||| ||||||||  ||||||| || |||| |||||||||||||| |  ||||||| |||||||| ||||||||||||    
T  9626349 attttcggttcagggattaaagtggtcaatttctactttcactttagttcatgtgacacctcatactctttgtcagcataa 9626429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 218 - 274
Target Start/End: Complemental strand, 28005415 - 28005359
Alignment:
Q  218 tttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggac 274  Q
    ||||||||| |||||||||||||||||| ||||||| ||||||| | ||||||||||    
T  28005415 tttgtatttgatcctgagtcagggatctttgtgacaacgaggtgtagagtcagggac 28005359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 218 - 274
Target Start/End: Complemental strand, 28062718 - 28062662
Alignment:
Q  218 tttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggac 274  Q
    ||||||||| |||||||||||||||||| ||||||| ||||||| | ||||||||||    
T  28062718 tttgtatttgatcctgagtcagggatctttgtgacaacgaggtgtagagtcagggac 28062662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 28526306 - 28526342
Alignment:
Q  1 taactgatagtaagtatgcacagtcagggacctaaca 37  Q
    |||||||||||||||||||||||||||||||||||||    
T  28526306 taactgatagtaagtatgcacagtcagggacctaaca 28526342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 30134899 - 30134855
Alignment:
Q  1 taactgatagtaagtatgcacagtcagggacctaacagtaagttg 45  Q
    |||||||||||||||||||||| |||| |||||||||||||||||    
T  30134899 taactgatagtaagtatgcacaatcagagacctaacagtaagttg 30134855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 32898204 - 32898248
Alignment:
Q  1 taactgatagtaagtatgcacagtcagggacctaacagtaagttg 45  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||    
T  32898204 taactgatagtaagtatgcacagtcagagacctaacagtaggttg 32898248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 119
Target Start/End: Original strand, 32898341 - 32898417
Alignment:
Q  43 ttgaagatatcgattttcgattcagggaccaaagtggccattttcgactttcactttagtccccgtgacacgtcata 119  Q
    |||| ||||| |||||| | |||||||||||||||| |||||||| ||||||||||| ||||  ||||||| |||||    
T  32898341 ttgaggatattgatttttggttcagggaccaaagtgaccattttctactttcactttggtccttgtgacacctcata 32898417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 143 - 227
Target Start/End: Complemental strand, 10406353 - 10406269
Alignment:
Q  143 gccacatcatcacttaacnnnnnnntttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtattta 227  Q
    ||||||||||||||||||       ||||||  ||| ||||||||||||||  ||||||||||||||||||||| ||| ||||||    
T  10406353 gccacatcatcacttaacagatttttttaacaccagggactaaagtgataatagaagtgcagagtcagagacttgtttttattta 10406269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 72 - 135
Target Start/End: Original strand, 39138569 - 39138632
Alignment:
Q  72 caaagtggccattttcgactttcactttagtccccgtgacacgtcatactccttgtcagcataa 135  Q
    ||||||| |||||||| ||||||||||||||||  ||||||| |||||| | ||||||||||||    
T  39138569 caaagtgaccattttctactttcactttagtccttgtgacacctcatacactttgtcagcataa 39138632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 49 - 119
Target Start/End: Original strand, 1952872 - 1952942
Alignment:
Q  49 atatcgattttcgattcagggaccaaagtggccattttcgactttcactttagtccccgtgacacgtcata 119  Q
    |||| |||||| | |||||||||||||||| |||||||| ||||||||||| |||||  |||||| |||||    
T  1952872 atattgatttttggttcagggaccaaagtgaccattttctactttcactttggtccctatgacacctcata 1952942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 319 - 365
Target Start/End: Original strand, 12221022 - 12221068
Alignment:
Q  319 aaattattactttttaacttttagaaagttgaattcaacatttttca 365  Q
    ||||||| |||||| |||||||| |||||||||||||||||||||||    
T  12221022 aaattataacttttaaacttttaaaaagttgaattcaacatttttca 12221068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 28006335 - 28006377
Alignment:
Q  1 taactgatagtaagtatgcacagtcagggacctaacagtaagt 43  Q
    |||||||||||||||||||||| ||||||||||||||| ||||    
T  28006335 taactgatagtaagtatgcacaatcagggacctaacagaaagt 28006377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 28063638 - 28063680
Alignment:
Q  1 taactgatagtaagtatgcacagtcagggacctaacagtaagt 43  Q
    |||||||||||||||||||||| ||||||||||||||| ||||    
T  28063638 taactgatagtaagtatgcacaatcagggacctaacagaaagt 28063680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 185 - 239
Target Start/End: Complemental strand, 41121214 - 41121160
Alignment:
Q  185 aagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcag 239  Q
    |||||||||  |||||||| |||||||||||| ||||||||||||| ||||||||    
T  41121214 aagtgataatagaagtgcatagtcagagacttctttgtatttaatcatgagtcag 41121160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 218 - 292
Target Start/End: Complemental strand, 59624 - 59548
Alignment:
Q  218 tttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagtga--atttactcaa 292  Q
    |||||| || |||||||||||||||   | |||||||||||||| | ||||||||||||||||||  ||||||||||    
T  59624 tttgtagtttatcctgagtcagggactaaagtgacagcgaggtgtaaagtcagggactaaagtgactatttactcaa 59548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 329 - 429
Target Start/End: Complemental strand, 27737803 - 27737704
Alignment:
Q  329 tttttaacttttagaaagttgaattcaacatttttcaccatttttcaagaaattatttctatttatgttcctcttaaccaatgcacaaaggacactcttt 428  Q
    ||||| |||||||||||||| ||||||||| |||| |  |||||| || | |||||||||| ||||||| |||||||| ||||  | || ||||||||||    
T  27737803 tttttgacttttagaaagttaaattcaacacttttaattattttttaacatattatttctaattatgtt-ctcttaactaatgttccaaagacactcttt 27737705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 63 - 135
Target Start/End: Original strand, 28006492 - 28006564
Alignment:
Q  63 ttcagggaccaaagtggccattttcgactttcactttagtccccgtgacacgtcatactccttgtcagcataa 135  Q
    ||||| |||||||||| ||| |||| | ||||||||||||||  |||| || ||||||||| |||||||||||    
T  28006492 ttcagtgaccaaagtgaccactttctattttcactttagtccttgtgatacatcatactccctgtcagcataa 28006564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 63 - 135
Target Start/End: Original strand, 28063795 - 28063867
Alignment:
Q  63 ttcagggaccaaagtggccattttcgactttcactttagtccccgtgacacgtcatactccttgtcagcataa 135  Q
    ||||| |||||||||| ||| |||| | ||||||||||||||  |||| || ||||||||| |||||||||||    
T  28063795 ttcagtgaccaaagtgaccactttctattttcactttagtccttgtgatacatcatactccctgtcagcataa 28063867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 31074399 - 31074363
Alignment:
Q  1 taactgatagtaagtatgcacagtcagggacctaaca 37  Q
    |||||||||||||||||||| ||||||||||||||||    
T  31074399 taactgatagtaagtatgcatagtcagggacctaaca 31074363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 35177757 - 35177721
Alignment:
Q  1 taactgatagtaagtatgcacagtcagggacctaaca 37  Q
    |||||||||||||||||||| ||||||||||||||||    
T  35177757 taactgatagtaagtatgcatagtcagggacctaaca 35177721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 329 - 368
Target Start/End: Original strand, 8210174 - 8210213
Alignment:
Q  329 tttttaacttttagaaagttgaattcaacatttttcacca 368  Q
    ||||||||||||| ||||||||||||| ||||||||||||    
T  8210174 tttttaacttttaaaaagttgaattcatcatttttcacca 8210213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 330 - 376
Target Start/End: Original strand, 4308834 - 4308880
Alignment:
Q  330 ttttaacttttagaaagttgaattcaacatttttcaccatttttcaa 376  Q
    |||||||||||| |||||| |||||| ||||||| ||||||||||||    
T  4308834 ttttaacttttataaagttaaattcatcattttttaccatttttcaa 4308880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 49 - 127
Target Start/End: Complemental strand, 36032947 - 36032869
Alignment:
Q  49 atatcgattttcgattcagggaccaaagtggccattttcgactttcactttagtccccgtgacacgtcatactccttgt 127  Q
    ||||| ||||||  |||||||||| || || | |||||| ||||||||||| ||||| ||||||| |||||| ||||||    
T  36032947 atatcaattttctcttcagggacctaattgacaattttctactttcactttcgtccctgtgacacctcataccccttgt 36032869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 261
Target Start/End: Complemental strand, 8569530 - 8569437
Alignment:
Q  168 tttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtg 261  Q
    ||||||| ||| ||||||| |||||||| ||||||| | ||| | |||  ||||||||||||| |||||||  || || ||||| |||||||||    
T  8569530 tttaacgtcagggactaaactgataacgaaagtgcacattcataaactactttgtatttaatcatgagtcaaagacctttgtgagagcgaggtg 8569437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 100
Target Start/End: Complemental strand, 9625437 - 9625380
Alignment:
Q  43 ttgaagatatcgattttcgattcagggaccaaagtggccattttcgactttcacttta 100  Q
    |||| ||||| ||||||||||||| | || |||||| |||||||| ||||||||||||    
T  9625437 ttgaggatattgattttcgattcacgaactaaagtgaccattttctactttcacttta 9625380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 92; Significance: 3e-44; HSPs: 66)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 82 - 282
Target Start/End: Complemental strand, 3671246 - 3671047
Alignment:
Q  82 attttcgactttcactttagtccccgtgacacgtcatactccttgtcagcataagccaagtgccacatcatcacttaacnnnnnnntttaacgacagaga 181  Q
    |||||| |||||||||||||||||||||||| ||||||| ||||||||||||||  || ||| ||||||||||||||||       ||||||| ||| ||    
T  3671246 attttctactttcactttagtccccgtgacatgtcataccccttgtcagcataaaacatgtgtcacatcatcacttaacataattttttaacggcaggga 3671147  T
Q  182 ctaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagtg 281  Q
     ||||||||||||||||||| ||||||| ||||||||||||||||||| ||||||||| || || ||||| || |||||||| ||||| ||| |||||||    
T  3671146 ttaaagtgataacggaagtggagagtcatagacttatttgtatttaattctgagtcagagacctttgtgatagagaggtgcaaagtcaagga-taaagtg 3671048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 168 - 282
Target Start/End: Complemental strand, 17700640 - 17700526
Alignment:
Q  168 tttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagt 267  Q
    ||||||| ||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| | |||||||||| ||||||||| |||    
T  17700640 tttaacgtcagggactaaagtgataacggaagtgcagagtcagggacttatttgtatttaatcctgagtcaggaacctatgtgacaacgaggtgcagagt 17700541  T
Q  268 cagggactaaagtga 282  Q
    ||  |||||||||||    
T  17700540 caaagactaaagtga 17700526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 180 - 282
Target Start/End: Complemental strand, 48573095 - 48572993
Alignment:
Q  180 gactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaag 279  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| | ||||||||| |||||||||| ||||    
T  48573095 gactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtcagggacctatgtgataacgaggtgcagagtcagggaccaaag 48572996  T
Q  280 tga 282  Q
    |||    
T  48572995 tga 48572993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 168 - 282
Target Start/End: Original strand, 17701920 - 17702034
Alignment:
Q  168 tttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagt 267  Q
    ||||||| ||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||| |||| |||||||||| |||| | |    
T  17701920 tttaacgtcagggactaaagtgataacggaagtgcagagtcagggacttatttgtatttaatcttgagtcagggacctatatgacagcgagctgcagaat 17702019  T
Q  268 cagggactaaagtga 282  Q
    ||| |||||||||||    
T  17702020 cagagactaaagtga 17702034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 168 - 282
Target Start/End: Complemental strand, 36279074 - 36278960
Alignment:
Q  168 tttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagt 267  Q
    ||||||| ||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| |||| || | | |    
T  36279074 tttaacgtcagggactaaaatgataacggaagtgcagagtcagagacttatttgtatttaatcctgaatcagggacctatgtgacaacgagctgtataat 36278975  T
Q  268 cagggactaaagtga 282  Q
    |||||||||||||||    
T  36278974 cagggactaaagtga 36278960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 168 - 282
Target Start/End: Original strand, 52318318 - 52318432
Alignment:
Q  168 tttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagt 267  Q
    ||||||| ||| ||||||||| ||| | ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| |||    
T  52318318 tttaacgtcagggactaaagtaatatcagaagtgcagagtcagggacttatttgtatttaatcctgagtcagggatctatgtgacagcgaagtgcagagt 52318417  T
Q  268 cagggactaaagtga 282  Q
    ||| ||| |||||||    
T  52318418 cagagaccaaagtga 52318432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 169 - 258
Target Start/End: Original strand, 11773053 - 11773142
Alignment:
Q  169 ttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgag 258  Q
    |||||| ||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  11773053 ttaacgccagggactaaagtgataacggaagtgtagagtcagagacttatttgtatttaatcctgagtcagggacctatgtgacagcgag 11773142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 145 - 282
Target Start/End: Complemental strand, 55388218 - 55388081
Alignment:
Q  145 cacatcatcacttaacnnnnnnntttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatc 244  Q
    ||||||||||||||||       ||||||| ||| ||||||||||||||||| |||||||||||||  ||||||||||||||||||||||||||| || |    
T  55388218 cacatcatcacttaacaaatttttttaacgtcagggactaaagtgataacgggagtgcagagtcagtaacttatttgtatttaatcctgagtcagagacc 55388119  T
Q  245 tatgtgacagcgaggtgcacagtcagggactaaagtga 282  Q
    ||| |||||||||| |||| | ||||||||||||||||    
T  55388118 tatatgacagcgagctgcagaatcagggactaaagtga 55388081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 126 - 282
Target Start/End: Complemental strand, 50753981 - 50753825
Alignment:
Q  126 gtcagcataagccaagtgccacatcatcacttaacnnnnnnntttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatt 225  Q
    ||||| ||||| || ||||||||||||||||||||       ||||||| ||| ||||||||||||||| |||||| ||||||||| |||| ||| ||||    
T  50753981 gtcagtataagacatgtgccacatcatcacttaacagatttttttaacggcagggactaaagtgataacagaagtgtagagtcagaaacttgtttatatt 50753882  T
Q  226 taatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagtga 282  Q
    ||||||||| | ||||| |||||||||||||||||||| ||  ||||||||||||||    
T  50753881 taatcctgaattagggacctatgtgacagcgaggtgcagagctagggactaaagtga 50753825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 180 - 282
Target Start/End: Complemental strand, 2591737 - 2591635
Alignment:
Q  180 gactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaag 279  Q
    |||||||||||| | |||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||| || |||| | |||||||||||||    
T  2591737 gactaaagtgatcatggaagtgcagagtcagagacttgtttgtatttaatcctgagtcagggacctatgtgacagcaagctgcagaatcagggactaaag 2591638  T
Q  280 tga 282  Q
    |||    
T  2591637 tga 2591635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 180 - 282
Target Start/End: Original strand, 45600952 - 45601053
Alignment:
Q  180 gactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaag 279  Q
    ||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| ||||||| ||||||||||||||||  || |||||||||||||||    
T  45600952 gactaaagtgataacggaagtgcagagtcag-gacttctttgtatttaatcctgaatcagggacctatgtgacagcgagggacagagtcagggactaaag 45601050  T
Q  280 tga 282  Q
    |||    
T  45601051 tga 45601053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 168 - 282
Target Start/End: Original strand, 47118052 - 47118166
Alignment:
Q  168 tttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagt 267  Q
    ||||||| ||| |||||||||||||||| |||||||||||||||||||| |||| ||||||||||||||| ||||  ||| ||||| ||||||||| |||    
T  47118052 tttaacgtcagggactaaagtgataacgaaagtgcagagtcagagacttctttgcatttaatcctgagtcggggacttatatgacaacgaggtgcagagt 47118151  T
Q  268 cagggactaaagtga 282  Q
    |||||||||||||||    
T  47118152 cagggactaaagtga 47118166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 48 - 258
Target Start/End: Original strand, 36827356 - 36827566
Alignment:
Q  48 gatatcgattttcgattcagggaccaaagtggccattttcgactttcactttagtccccgtgacacgtcatactccttgtcagcataagccaagtgccac 147  Q
    ||||| |||||||||||||||||||||| |   ||||||| | ||||||||||||||| |||| || |||  |||||| |||||||||  ||  || |||    
T  36827356 gatattgattttcgattcagggaccaaaataatcattttctattttcactttagtccctgtgatacttcacgctccttctcagcataaaacatttgtcac 36827455  T
Q  148 atcatcacttaacnnnnnnntttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctat 247  Q
    |||||||||||||       ||||||  |||||||||||||||||||||||||| | | ||||||| |  ||| ||||||||||||||||| |||||| |    
T  36827456 atcatcacttaacaaaattatttaacatcagagactaaagtgataacggaagtgtacattcagagattattttatatttaatcctgagtcaaggatcttt 36827555  T
Q  248 gtgacagcgag 258  Q
    || ||||||||    
T  36827556 gtcacagcgag 36827566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 48 - 281
Target Start/End: Complemental strand, 20464311 - 20464078
Alignment:
Q  48 gatatcgattttcgattcagggaccaaagtggccattttcgactttcactttagtccccgtgacacgtcatactccttgtcagcataagccaagtgccac 147  Q
    ||||| |||||| |||||| ||||||||||| |||||||| ||||||| ||||||| | |||| || || ||   | ||| | | |||  || ||| |||    
T  20464311 gatattgatttttgattcatggaccaaagtgaccattttctactttcattttagtctctgtgatacctcgtatgtcatgttatcgtaaaacatgtgtcac 20464212  T
Q  148 atcatcacttaacnnnnnnntttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctat 247  Q
    |||||||||||||       ||||||| |   ||||||||||||||| ||||||||||||||| ||||| ||||||||||||| |||| |||||| || |    
T  20464211 atcatcacttaacagagttatttaacgtcgtggactaaagtgataacagaagtgcagagtcagggacttctttgtatttaatcatgagccagggaccttt 20464112  T
Q  248 gtgacagcgaggtgcacagtcagggactaaagtg 281  Q
    |||||| ||||||||| |||| ||||||||||||    
T  20464111 gtgacaacgaggtgcagagtcggggactaaagtg 20464078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 143 - 251
Target Start/End: Original strand, 36280293 - 36280401
Alignment:
Q  143 gccacatcatcacttaacnnnnnnntttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcaggga 242  Q
    ||||||||||||||||||       ||||||| ||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||    
T  36280293 gccacatcatcacttaacatatttttttaacgtcagggactaaagtgataacggaagtgcagagtcagagacttatttatatttaatcctgagtcagaga 36280392  T
Q  243 tctatgtga 251  Q
     ||||||||    
T  36280393 cctatgtga 36280401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 180 - 282
Target Start/End: Original strand, 2592020 - 2592122
Alignment:
Q  180 gactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaag 279  Q
    |||||||||||||||||||||   ||||||| ||||||||||||||||||||||||||||||| ||||||||||||||| |||| | | |||||||||||    
T  2592020 gactaaagtgataacggaagtattgagtcagggacttatttgtatttaatcctgagtcagggacctatgtgacagcgagctgcagaattagggactaaag 2592119  T
Q  280 tga 282  Q
    |||    
T  2592120 tga 2592122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 168 - 282
Target Start/End: Complemental strand, 19114655 - 19114541
Alignment:
Q  168 tttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagt 267  Q
    |||||||  ||||||||||||||||||||||||||| ||| || ||||| ||||||||||||| ||||||||||| || ||||||| ||| ||||| |||    
T  19114655 tttaacgtaagagactaaagtgataacggaagtgcaaagttagtgacttctttgtatttaatcttgagtcagggacctctgtgacaacgaagtgcagagt 19114556  T
Q  268 cagggactaaagtga 282  Q
    |||||||||||||||    
T  19114555 cagggactaaagtga 19114541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 317 - 429
Target Start/End: Original strand, 21814202 - 21814312
Alignment:
Q  317 ggaaattattactttttaacttttagaaagttgaattcaacatttttcaccatttttcaagaaattatttctatttatgttcctcttaaccaatgcacaa 416  Q
    ||||||||| ||||||| ||||||||||| |||||||||||| ||||||||| ||||||| ||||||||||||||||||||  ||||||||||||| |||    
T  21814202 ggaaattataactttttgacttttagaaaattgaattcaacacttttcaccacttttcaacaaattatttctatttatgtt-atcttaaccaatgcccaa 21814300  T
Q  417 aggacactcttta 429  Q
    | |||||||||||    
T  21814301 a-gacactcttta 21814312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 183 - 282
Target Start/End: Complemental strand, 34263912 - 34263813
Alignment:
Q  183 taaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagtga 282  Q
    ||||||||||| ||||||| |||||||||||||||||||||||||||||||| ||| ||| || ||||||||||||||||| |||||||| | |||||||    
T  34263912 taaagtgataatggaagtgtagagtcagagacttatttgtatttaatcctgaatcaaggacctctgtgacagcgaggtgcagagtcaggggccaaagtga 34263813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 180 - 282
Target Start/End: Original strand, 33428448 - 33428550
Alignment:
Q  180 gactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaag 279  Q
    ||||||||||| ||||||| ||||||||||  ||||| |||||||||||| |||||||||||| |||||||||| ||||||||| |||||||||| ||||    
T  33428448 gactaaagtgacaacggaaatgcagagtcaaggacttctttgtatttaattctgagtcagggacctatgtgacaacgaggtgcagagtcagggacgaaag 33428547  T
Q  280 tga 282  Q
    |||    
T  33428548 tga 33428550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 143 - 254
Target Start/End: Original strand, 53959076 - 53959187
Alignment:
Q  143 gccacatcatcacttaacnnnnnnntttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcaggga 242  Q
    ||||||||||||||||||       ||||||| ||||||||||||||||||||||||||||||||||   |||||||||||||||||| |||||||| ||    
T  53959076 gccacatcatcacttaacaaatttttttaacgtcagagactaaagtgataacggaagtgcagagtcatgaacttatttgtatttaatcatgagtcagaga 53959175  T
Q  243 tctatgtgacag 254  Q
     |||||||||||    
T  53959176 cctatgtgacag 53959187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 329 - 429
Target Start/End: Complemental strand, 15502721 - 15502622
Alignment:
Q  329 tttttaacttttagaaagttgaattcaacatttttcaccatttttcaagaaattatttctatttatgttcctcttaaccaatgcacaaaggacactcttt 428  Q
    ||||||||||||| ||||||||||||||||||||| |||||||||||| ||||||||||||||| |||| |||||||||||||    |||||||||||||    
T  15502721 tttttaacttttaaaaagttgaattcaacattttttaccatttttcaacaaattatttctatttttgtt-ctcttaaccaatgtctcaaggacactcttt 15502623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 168 - 282
Target Start/End: Original strand, 47075352 - 47075466
Alignment:
Q  168 tttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagt 267  Q
    ||||||| |||||||||||||||||||||||||| |||||||| |  || ||||||||||||| ||||| | ||| |||||||||| ||||||||| |||    
T  47075352 tttaacgtcagagactaaagtgataacggaagtgtagagtcaggggtttctttgtatttaatcttgagtgacggacctatgtgacaacgaggtgcagagt 47075451  T
Q  268 cagggactaaagtga 282  Q
    || ||| ||||||||    
T  47075452 caaggattaaagtga 47075466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 180 - 282
Target Start/End: Original strand, 55389482 - 55389584
Alignment:
Q  180 gactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaag 279  Q
    |||||||||||||||||||||| |||||||| |||||| |||||||||||  |||||||  || |||||||||||||||||||| ||| |||||| ||||    
T  55389482 gactaaagtgataacggaagtgtagagtcagggacttaattgtatttaattttgagtcaatgacctatgtgacagcgaggtgcagagttagggaccaaag 55389581  T
Q  280 tga 282  Q
    |||    
T  55389582 tga 55389584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 144 - 282
Target Start/End: Complemental strand, 52317125 - 52316987
Alignment:
Q  144 ccacatcatcacttaacnnnnnnntttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggat 243  Q
    |||||||||||||||||       ||||||| ||  ||||||| |||||||||| ||||||||| | |||||||||||||||||||| |||||||| ||     
T  52317125 ccacatcatcacttaacagatttttttaacgtcatggactaaaatgataacggaggtgcagagttaaagacttatttgtatttaatcatgagtcagagac 52317026  T
Q  244 ctatgtgacagcgaggtgcacagtcagggactaaagtga 282  Q
    |||| |||||||||| |||| | |||| |||||||||||    
T  52317025 ctatatgacagcgagctgcagaatcagagactaaagtga 52316987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 330 - 429
Target Start/End: Original strand, 41998907 - 41999005
Alignment:
Q  330 ttttaacttttagaaagttgaattcaacatttttcaccatttttcaagaaattatttctatttatgttcctcttaaccaatgcacaaaggacactcttta 429  Q
    |||| ||||||| ||||||||||| |||| ||||||||||||||||| |||||||||||||||||||| |||||||||||||  | |||| |||||||||    
T  41998907 tttttacttttataaagttgaatttaacacttttcaccatttttcaacaaattatttctatttatgtt-ctcttaaccaatgtcccaagggcactcttta 41999005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 333 - 411
Target Start/End: Original strand, 1165784 - 1165861
Alignment:
Q  333 taacttttagaaagttgaattcaacatttttcaccatttttcaagaaattatttctatttatgttcctcttaaccaatg 411  Q
    ||||||||||||||||||||||||||||||||| || ||||||| |||||||||||||||||||| ||| |||||||||    
T  1165784 taacttttagaaagttgaattcaacatttttcatcacttttcaacaaattatttctatttatgtt-ctcataaccaatg 1165861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 180 - 242
Target Start/End: Original strand, 48574472 - 48574534
Alignment:
Q  180 gactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcaggga 242  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||    
T  48574472 gactaaagtgataacgaaagtgcagagtcagggacttatttgtatttaatcctgagtcaggga 48574534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 169 - 253
Target Start/End: Original strand, 49261539 - 49261620
Alignment:
Q  169 ttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgaca 253  Q
    |||||| ||||||||||||||||||||||| |||||||| ||||||   ||||||||||||||||||||||||| ||||||||||    
T  49261539 ttaacgtcagagactaaagtgataacggaaatgcagagttagagac---tttgtatttaatcctgagtcagggacctatgtgaca 49261620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 62 - 159
Target Start/End: Original strand, 3694035 - 3694132
Alignment:
Q  62 attcagggaccaaagtggccattttcgactttcactttagtccccgtgacacgtcatactccttgtcagcataagccaagtgccacatcatcacttaa 159  Q
    ||||||||| ||||||| |||||||  ||||||||||||||| |||| |||| |||||||||||||||||||||  || ||| |||||||||||||||    
T  3694035 attcagggatcaaagtgaccattttgtactttcactttagtctccgttacacatcatactccttgtcagcataaaacatgtgacacatcatcacttaa 3694132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 180 - 276
Target Start/End: Complemental strand, 48808476 - 48808380
Alignment:
Q  180 gactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggacta 276  Q
    ||||||||||| |||||||||||||||| ||  ||||||||||||||||||||||||||| || |||| | |||||||| |||| | ||||||||||    
T  48808476 gactaaagtgacaacggaagtgcagagttaggaacttatttgtatttaatcctgagtcagagacctatctaacagcgagctgcagaatcagggacta 48808380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 329 - 411
Target Start/End: Original strand, 15005830 - 15005911
Alignment:
Q  329 tttttaacttttagaaagttgaattcaacatttttcaccatttttcaagaaattatttctatttatgttcctcttaaccaatg 411  Q
    ||||||||||||| |||||||||||||||| |||| |||||||||| | ||||||||||| |||||||| |||||||||||||    
T  15005830 tttttaacttttacaaagttgaattcaacactttttaccatttttccataaattatttctgtttatgtt-ctcttaaccaatg 15005911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 180 - 282
Target Start/End: Original strand, 19115160 - 19115261
Alignment:
Q  180 gactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaag 279  Q
    ||||||||| | ||||||||||||||||||  ||||| ||||||||||||||||||| | ||| |||||||||| ||||||||| ||||| | |||||||    
T  19115160 gactaaagtaaaaacggaagtgcagagtcat-gacttctttgtatttaatcctgagtgaaggacctatgtgacatcgaggtgcagagtcacgaactaaag 19115258  T
Q  280 tga 282  Q
    |||    
T  19115259 tga 19115261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 317 - 414
Target Start/End: Original strand, 3084012 - 3084107
Alignment:
Q  317 ggaaattattactttttaacttttagaaagttgaattcaacatttttcaccatttttcaagaaattatttctatttatgttcctcttaaccaatgcac 414  Q
    ||||||||  ||||||||| |||||||||||| || |||||| |||| |||||||||||| ||||||| |||||||||||| ||||||||||||||||    
T  3084012 ggaaattacaactttttaa-ttttagaaagttaaactcaacactttttaccatttttcaacaaattatatctatttatgtt-ctcttaaccaatgcac 3084107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 330 - 429
Target Start/End: Complemental strand, 34060850 - 34060751
Alignment:
Q  330 ttttaacttttagaaagttgaattcaacatttttcaccatttttcaagaaattatttctatttatgttcctcttaaccaatgcacaaaggacactcttta 429  Q
    |||||||||||| |||||| |||||| || ||||||||||||||||| | | ||||| ||||| |  || ||||||||||||||| ||||||||||||||    
T  34060850 ttttaacttttaaaaagttaaattcatcacttttcaccatttttcaatacaatatttttattttttatcttcttaaccaatgcaccaaggacactcttta 34060751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 215 - 281
Target Start/End: Complemental strand, 19331183 - 19331117
Alignment:
Q  215 ttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagtg 281  Q
    |||||||||||||||||||||||||||| |||||||||||| ||||||| ||||||| || ||||||    
T  19331183 ttatttgtatttaatcctgagtcagggacctatgtgacagcaaggtgcagagtcaggaacgaaagtg 19331117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 195 - 282
Target Start/End: Complemental strand, 53957769 - 53957683
Alignment:
Q  195 ggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagtga 282  Q
    ||||||||||||||| |||||||||||||||| ||||||||||||| | |||||| |||||||| |||| | ||| | ||||||||||    
T  53957769 ggaagtgcagagtcatagacttatttgtattt-atcctgagtcaggaacctatgtaacagcgagttgcagaatcaagtactaaagtga 53957683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 191 - 265
Target Start/End: Complemental strand, 47427959 - 47427885
Alignment:
Q  191 taacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcaca 265  Q
    ||||| ||||||| |||||| ||||| ||||||||||||  ||||||| ||| ||||||||||||||||||||||    
T  47427959 taacgtaagtgcacagtcagggacttctttgtatttaattttgagtcaaggacctatgtgacagcgaggtgcaca 47427885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 49 - 119
Target Start/End: Original strand, 55389371 - 55389441
Alignment:
Q  49 atatcgattttcgattcagggaccaaagtggccattttcgactttcactttagtccccgtgacacgtcata 119  Q
    |||| |||||||| |||||||||||||||| |||||||| ||||||||||| ||||| ||||||| |||||    
T  55389371 atattgattttcggttcagggaccaaagtgaccattttctactttcactttggtccctgtgacacctcata 55389441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 17700882 - 17700838
Alignment:
Q  1 taactgatagtaagtatgcacagtcagggacctaacagtaagttg 45  Q
    |||||||||||||||||| ||||||||||||||||||||||||||    
T  17700882 taactgatagtaagtatgtacagtcagggacctaacagtaagttg 17700838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 17701687 - 17701731
Alignment:
Q  1 taactgatagtaagtatgcacagtcagggacctaacagtaagttg 45  Q
    |||||||||||||||||||||||||||||||||||||||| ||||    
T  17701687 taactgatagtaagtatgcacagtcagggacctaacagtaggttg 17701731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 36279308 - 36279264
Alignment:
Q  1 taactgatagtaagtatgcacagtcagggacctaacagtaagttg 45  Q
    |||||||||||||||||||||||||||||||||||||||| ||||    
T  36279308 taactgatagtaagtatgcacagtcagggacctaacagtaggttg 36279264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 54 - 278
Target Start/End: Complemental strand, 40206118 - 40205893
Alignment:
Q  54 gattttcgattcagggaccaaagtggccattttcgactttcactttagtccccgtgacacgtcatactccttgtcagcataagccaagtgccacatcatc 153  Q
    |||||||| |||| ||||||||||| |||||||  ||||||||||||| ||  ||||||  |||  | ||||||||||| ||  ||  |||||| ||||     
T  40206118 gattttcggttcaaggaccaaagtgaccattttatactttcactttagcccttgtgacaactcacgcaccttgtcagcacaaaacatttgccacctcatt 40206019  T
Q  154 acttaacnnnnnnntttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtc-agggatctatgtgac 252  Q
    | |||||       ||||||| ||  ||||||| |||||||||||||||| | |||||||||  ||||| ||||||| |||||| || || || | ||||    
T  40206018 agttaacataattttttaacgccaatgactaaactgataacggaagtgcacattcagagactactttgtttttaatcgtgagtcaagagacctttatgac 40205919  T
Q  253 agcgaggtgcacagtcagggactaaa 278  Q
    |||||| | || |||| |||||||||    
T  40205918 agcgagctacagagtccgggactaaa 40205893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 179 - 282
Target Start/End: Original strand, 47428575 - 47428672
Alignment:
Q  179 agactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaa 278  Q
    ||||| |||||||||||||||||||||||||  ||||| |||      |||| ||||||| ||| ||||||||||| |||||||| ||||||||| ||||    
T  47428575 agactgaagtgataacggaagtgcagagtcaatgacttcttt------aatcttgagtcacggacctatgtgacagagaggtgcaaagtcagggattaaa 47428668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 48573351 - 48573307
Alignment:
Q  1 taactgatagtaagtatgcacagtcagggacctaacagtaagttg 45  Q
    |||||||||||||||||| ||||||||||||||||||||||||||    
T  48573351 taactgatagtaagtatgtacagtcagggacctaacagtaagttg 48573307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 118
Target Start/End: Complemental strand, 55388281 - 55388211
Alignment:
Q  48 gatatcgattttcgattcagggaccaaagtggccattttcgactttcactttagtccccgtgacacgtcat 118  Q
    ||||| |||||| | |||||||||||||||| |||||||| ||||||||||| ||||| ||||||| ||||    
T  55388281 gatattgatttttggttcagggaccaaagtgaccattttctactttcactttggtccctgtgacacatcat 55388211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 119
Target Start/End: Complemental strand, 2591848 - 2591776
Alignment:
Q  47 agatatcgattttcgattcagggaccaaagtggccattttcgactttcactttagtccccgtgacacgtcata 119  Q
    |||||| |||||| | |||||||||||||||||| |||||  ||||||||||||||||  ||||||| |||||    
T  2591848 agatattgatttttgcttcagggaccaaagtggcaattttttactttcactttagtccatgtgacacctcata 2591776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 63 - 119
Target Start/End: Complemental strand, 17700726 - 17700670
Alignment:
Q  63 ttcagggaccaaagtggccattttcgactttcactttagtccccgtgacacgtcata 119  Q
    |||||||||||||||| |||||||| ||||||||||| ||||| ||||||| |||||    
T  17700726 ttcagggaccaaagtgaccattttctactttcactttggtccctgtgacacctcata 17700670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 63 - 119
Target Start/End: Complemental strand, 36279159 - 36279103
Alignment:
Q  63 ttcagggaccaaagtggccattttcgactttcactttagtccccgtgacacgtcata 119  Q
    |||||||||||||||| |||||||| ||||||||||| ||||| ||||||| |||||    
T  36279159 ttcagggaccaaagtgaccattttctactttcactttggtccctgtgacacctcata 36279103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 36280077 - 36280121
Alignment:
Q  1 taactgatagtaagtatgcacagtcagggacctaacagtaagttg 45  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||    
T  36280077 taactgatagtaattatgcacagtcagggacctaacattaagttg 36280121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 48574218 - 48574254
Alignment:
Q  1 taactgatagtaagtatgcacagtcagggacctaaca 37  Q
    |||||||||||||||||||||||||||||||||||||    
T  48574218 taactgatagtaagtatgcacagtcagggacctaaca 48574254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 55389229 - 55389273
Alignment:
Q  1 taactgatagtaagtatgcacagtcagggacctaacagtaagttg 45  Q
    ||||||||||||| ||||||||||||||||||||| |||||||||    
T  55389229 taactgatagtaaatatgcacagtcagggacctaagagtaagttg 55389273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 329 - 411
Target Start/End: Complemental strand, 21195364 - 21195283
Alignment:
Q  329 tttttaacttttagaaagttgaattcaacatttttcaccatttttcaagaaattatttctatttatgttcctcttaaccaatg 411  Q
    ||||||||||||| ||||||||||||| || |||||| || ||| ||| ||  ||||||||||| ||||||| ||||||||||    
T  21195364 tttttaacttttaaaaagttgaattcaccacttttcatcactttccaacaagatatttctatttttgttcct-ttaaccaatg 21195283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 181 - 251
Target Start/End: Complemental strand, 33427860 - 33427791
Alignment:
Q  181 actaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtga 251  Q
    ||||||||||||||| |||||||||||||| |  | |||||||||||||||||| ||| ||| ||||||||    
T  33427860 actaaagtgataacgaaagtgcagagtcag-ggttaatttgtatttaatcctgaatcaaggacctatgtga 33427791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 49 - 119
Target Start/End: Complemental strand, 48808593 - 48808523
Alignment:
Q  49 atatcgattttcgattcagggaccaaagtggccattttcgactttcactttagtccccgtgacacgtcata 119  Q
    |||| |||||| | |||||||||||||||| |||||||| ||||||||||| ||| | ||||||| |||||    
T  48808593 atattgatttttggttcagggaccaaagtgaccattttctactttcactttggtctctgtgacacctcata 48808523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 113
Target Start/End: Complemental strand, 19114735 - 19114670
Alignment:
Q  48 gatatcgattttcgattcagggaccaaagtggccattttcgactttcactttagtccccgtgacac 113  Q
    ||||| |||||| ||||||||||  |||||| |||||||| ||||||||||||||||  |||||||    
T  19114735 gatattgatttttgattcagggattaaagtgaccattttctactttcactttagtccttgtgacac 19114670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 253
Target Start/End: Complemental strand, 39497329 - 39497244
Alignment:
Q  168 tttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgaca 253  Q
    |||||||||||||| |||| |||||||| ||||||| | |||   |||  ||||||||||||||||||||| ||| || |||||||    
T  39497329 tttaacgacagagattaaactgataacgaaagtgcacattcaataactattttgtatttaatcctgagtcatggacctttgtgaca 39497244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 48808726 - 48808682
Alignment:
Q  1 taactgatagtaagtatgcacagtcagggacctaacagtaagttg 45  Q
    |||||||||||||||||||||||||||| || |||||||| ||||    
T  48808726 taactgatagtaagtatgcacagtcaggaacataacagtaggttg 48808682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 48809416 - 48809452
Alignment:
Q  1 taactgatagtaagtatgcacagtcagggacctaaca 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  48809416 taactgatagtaagtatgcacagttagggacctaaca 48809452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 53958862 - 53958894
Alignment:
Q  1 taactgatagtaagtatgcacagtcagggacct 33  Q
    |||||||||||||||||||||||||||||||||    
T  53958862 taactgatagtaagtatgcacagtcagggacct 53958894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 55388425 - 55388381
Alignment:
Q  1 taactgatagtaagtatgcacagtcagggacctaacagtaagttg 45  Q
    |||||||||||||||||||||||||||| || |||||||| ||||    
T  55388425 taactgatagtaagtatgcacagtcaggaacttaacagtaggttg 55388381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 332 - 399
Target Start/End: Complemental strand, 54143889 - 54143822
Alignment:
Q  332 ttaacttttagaaagttgaattcaacatttttcaccatttttcaagaaattatttctatttatgttcc 399  Q
    |||||||||| ||||||||||| | ||||||||| || ||||||| ||  ||||||||||| ||||||    
T  54143889 ttaacttttaaaaagttgaatttaccatttttcatcacttttcaataagatatttctatttttgttcc 54143822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 334 - 388
Target Start/End: Complemental strand, 22455423 - 22455369
Alignment:
Q  334 aacttttagaaagttgaattcaacatttttcaccatttttcaagaaattatttct 388  Q
    |||||||||||||||||||| || ||||||||||| |||| || | |||||||||    
T  22455423 aacttttagaaagttgaatttaatatttttcaccactttttaatacattatttct 22455369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 49 - 119
Target Start/End: Complemental strand, 48573206 - 48573136
Alignment:
Q  49 atatcgattttcgattcagggaccaaagtggccattttcgactttcactttagtccccgtgacacgtcata 119  Q
    |||| |||||| | |||| ||| ||||||| |||||||| ||||||||||| ||||| ||||||| |||||    
T  48573206 atattgatttttggttcatggatcaaagtgaccattttctactttcactttggtccctgtgacacctcata 48573136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 180 - 210
Target Start/End: Original strand, 48809667 - 48809697
Alignment:
Q  180 gactaaagtgataacggaagtgcagagtcag 210  Q
    |||||||||||||||||||||||||||||||    
T  48809667 gactaaagtgataacggaagtgcagagtcag 48809697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 327 - 376
Target Start/End: Original strand, 28954253 - 28954302
Alignment:
Q  327 actttttaacttttagaaagttgaattcaacatttttcaccatttttcaa 376  Q
    |||||| |||||||||| |||||||||||||| ||| |||||||| ||||    
T  28954253 acttttaaacttttagacagttgaattcaacactttccaccatttatcaa 28954302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 85; Significance: 5e-40; HSPs: 51)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 141 - 274
Target Start/End: Original strand, 7945528 - 7945661
Alignment:
Q  141 gtgccacatcatcacttaacnnnnnnntttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagg 240  Q
    |||||||||||||||||| |       ||||||| ||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  7945528 gtgccacatcatcacttagcatatttttttaacgtcagggactaaagtgataacggaagtgcatagtcagagacttatttgtatttaatcctgagtcagg 7945627  T
Q  241 gatctatgtgacagcgaggtgcacagtcagggac 274  Q
     | |||||||||||||||||||| ||||||||||    
T  7945628 aacctatgtgacagcgaggtgcagagtcagggac 7945661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 143 - 282
Target Start/End: Original strand, 32665746 - 32665885
Alignment:
Q  143 gccacatcatcacttaacnnnnnnntttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcaggga 242  Q
    ||||||||||||||||||       | ||||| ||| |||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| ||    
T  32665746 gccacatcatcacttaacagatttttgtaacgccagggactaaagtgataacggaagtgcagagtcaaagacttatttgtatttaatcatgagtcagaga 32665845  T
Q  243 tctatgtgacagcgaggtgcacagtcagggactaaagtga 282  Q
     ||||||||||||||| |||| | ||||||||||||||||    
T  32665846 cctatgtgacagcgagctgcagaatcagggactaaagtga 32665885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 168 - 278
Target Start/End: Complemental strand, 5782536 - 5782426
Alignment:
Q  168 tttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagt 267  Q
    ||||||| |||||||||||||||||| ||||||||| | |||||||||| ||||||||||||| |||||||| || |||||||||||||||||||| |||    
T  5782536 tttaacgtcagagactaaagtgataagggaagtgcataatcagagacttctttgtatttaatcatgagtcagagacctatgtgacagcgaggtgcagagt 5782437  T
Q  268 cagggactaaa 278  Q
    |||||||||||    
T  5782436 cagggactaaa 5782426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 143 - 279
Target Start/End: Complemental strand, 9339793 - 9339657
Alignment:
Q  143 gccacatcatcacttaacnnnnnnntttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcaggga 242  Q
    ||||||||||||||||||       ||||||| ||| ||||||||||||||||||||||||||||| | || ||||||||||||||||||||||||||||    
T  9339793 gccacatcatcacttaacagatttttttaacgtcagggactaaagtgataacggaagtgcagagtcggggatttatttgtatttaatcctgagtcaggga 9339694  T
Q  243 tctatgtgacagcgaggtgcacagtcagggactaaag 279  Q
     |||||| ||| |||| |||| | |||||||||||||    
T  9339693 cctatgtaacaacgagctgcagaatcagggactaaag 9339657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 143 - 263
Target Start/End: Original strand, 10333162 - 10333282
Alignment:
Q  143 gccacatcatcacttaacnnnnnnntttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcaggga 242  Q
    ||||||||||||||||||       |||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||    
T  10333162 gccacatcatcacttaacagatttttttaacgctagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcttgagtcagaga 10333261  T
Q  243 tctatgtgacagcgaggtgca 263  Q
     |||||| |||||||| ||||    
T  10333262 cctatgtaacagcgagctgca 10333282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 67 - 282
Target Start/End: Complemental strand, 8975382 - 8975167
Alignment:
Q  67 gggaccaaagtggccattttcgactttcactttagtccccgtgacacgtcatactccttgtcagcataagccaagtgccacatcatcacttaacnnnnnn 166  Q
    |||||||||||| |||||||| ||||||||||||||||| ||||||  |||||||||||||| ||||||  ||  || || ||||||| |||||          
T  8975382 gggaccaaagtgaccattttctactttcactttagtccctgtgacatctcatactccttgtcggcataaaacatttgtcatatcatcaattaacaaaatt 8975283  T
Q  167 ntttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacag 266  Q
     ||||||| || ||||||||||||||||| ||||||| | |||  ||||  ||| ||||||||| ||||||||||| || ||||||| | ||||||| ||    
T  8975282 atttaacgccaaagactaaagtgataacgaaagtgcatattcatggactactttatatttaatcttgagtcagggacctttgtgacaacaaggtgcaaag 8975183  T
Q  267 tcagggactaaagtga 282  Q
    | |||||| |||||||    
T  8975182 ttagggaccaaagtga 8975167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 48 - 282
Target Start/End: Complemental strand, 6612652 - 6612427
Alignment:
Q  48 gatatcgattttcgattcagggaccaaagtggccattttcgactttcactttagtccccgtgacacgtcatactccttgtcagcataagccaagtgccac 147  Q
    ||||| |||||| | |||| |||| ||||||  ||||||| ||||| | ||||||||| ||||||| ||||| |||||||||||||         | |||    
T  6612652 gatattgatttttggttcaaggacaaaagtgatcattttctactttgaatttagtccctgtgacacctcatattccttgtcagcat---------gtcac 6612562  T
Q  148 atcatcacttaacnnnnnnntttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctat 247  Q
    || ||||||||||       ||||||| ||| || ||||||||||| |||||||||||||||||||||| ||||||||||||| |||||||| ||  | |    
T  6612561 ataatcacttaacaaaattatttaacgtcagggattaaagtgataatggaagtgcagagtcagagacttgtttgtatttaatcatgagtcagagacattt 6612462  T
Q  248 gtgacagcgaggtgcacagtcagggactaaagtga 282  Q
     | ||||||||||||| ||||||||||||||||||    
T  6612461 ataacagcgaggtgcagagtcagggactaaagtga 6612427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 168 - 251
Target Start/End: Original strand, 9341026 - 9341109
Alignment:
Q  168 tttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtga 251  Q
    ||||||| ||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||| ||||||||    
T  9341026 tttaacgtcagagactaaagtgataacagaagtgcaaagtcagagacttatttgtatttaatcctgagtcagggacctatgtga 9341109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 179 - 270
Target Start/End: Original strand, 52440571 - 52440662
Alignment:
Q  179 agactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcag 270  Q
    ||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| ||||||| |||||||||||||| ||||| ||||||    
T  52440571 agactaaagtgataatggaagtgcagagtcagagacttatttatatttaatcctgactcagggacctatgtgacagcgatgtgcaaagtcag 52440662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 180 - 282
Target Start/End: Complemental strand, 10333096 - 10332994
Alignment:
Q  180 gactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaag 279  Q
    ||||||| |||||||||||||||||||| || ||||||||| ||||||||||||| ||| ||| |||||||||| ||||||||| |||||||||||||||    
T  10333096 gactaaaatgataacggaagtgcagagtaagggacttatttatatttaatcctgaatcaaggacctatgtgacaacgaggtgcaaagtcagggactaaag 10332997  T
Q  280 tga 282  Q
    |||    
T  10332996 tga 10332994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 168 - 282
Target Start/End: Complemental strand, 22856802 - 22856688
Alignment:
Q  168 tttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagt 267  Q
    ||||||| | |||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| | |||| ||| ||| || |||||| |||    
T  22856802 tttaacgtcggagactaaagtgataacggaagtgcagagttagagacttctttgtatttaatcctgagtcaagaatctttgtaacaacgtggtgcagagt 22856703  T
Q  268 cagggactaaagtga 282  Q
    ||| |||||||||||    
T  22856702 cagtgactaaagtga 22856688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 327 - 411
Target Start/End: Complemental strand, 51046728 - 51046645
Alignment:
Q  327 actttttaacttttagaaagttgaattcaacatttttcaccatttttcaagaaattatttctatttatgttcctcttaaccaatg 411  Q
    ||||||| ||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||||||| |||||||||||||    
T  51046728 actttttgacttttaaaaagttgaattcaacacttttcaccatttttcaacaaattatttctatttatgtt-ctcttaaccaatg 51046645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 180 - 263
Target Start/End: Original strand, 5783122 - 5783205
Alignment:
Q  180 gactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgca 263  Q
    ||||||||||||||||||||||||||||||  ||||| |||||||||||| |||||||  ||||||||||||||||||||||||    
T  5783122 gactaaagtgataacggaagtgcagagtcatggacttctttgtatttaattctgagtcgaggatctatgtgacagcgaggtgca 5783205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 534383 - 534510
Alignment:
Q  1 taactgatagtaagtatgcacagtcagggacctaacagtaagttgaagatatcgattttcgattcagggaccaaagtggccattttcgactttcacttta 100  Q
    ||||||| ||||| ||| |||| | ||||| ||| |||||| |||| ||||| ||||||||||||  ||| |||||||  ||||||  ||||||||||||    
T  534383 taactgacagtaaatatacacatttagggatcta-cagtaaattgaggatattgattttcgattcgtggatcaaagtgatcattttttactttcacttta 534481  T
Q  101 gtccccgtgacacgtcatactccttgtca 129  Q
    |||||||||||||||||||||||||||||    
T  534482 gtccccgtgacacgtcatactccttgtca 534510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 180 - 276
Target Start/End: Complemental strand, 7944265 - 7944169
Alignment:
Q  180 gactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggacta 276  Q
    ||||||| |||||||| |||||||||||||  ||||||||||||||||||  ||||||||||| ||||||||||||||| |||| | ||||||||||    
T  7944265 gactaaattgataacgaaagtgcagagtcaaggacttatttgtatttaattttgagtcagggacctatgtgacagcgagttgcaaaatcagggacta 7944169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 145 - 282
Target Start/End: Complemental strand, 52439620 - 52439487
Alignment:
Q  145 cacatcatcacttaacnnnnnnntttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatc 244  Q
    ||||||||||||||||       ||||||| ||| ||||||||||||||||||| |||||||    |||||||| |||||||||||||||| ||| || |    
T  52439620 cacatcatcacttaacagatttttttaacgtcagggactaaagtgataacggaaatgcagag----agacttatctgtatttaatcctgagccagagacc 52439525  T
Q  245 tatgtgacagcgaggtgcacagtcagggactaaagtga 282  Q
    |||||||||||||| |||| | |||||| |||||||||    
T  52439524 tatgtgacagcgagctgcagaatcaggggctaaagtga 52439487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 329 - 398
Target Start/End: Original strand, 32268033 - 32268102
Alignment:
Q  329 tttttaacttttagaaagttgaattcaacatttttcaccatttttcaagaaattatttctatttatgttc 398  Q
    ||||| |||||||||||||||||||||||| ||||||||||||||||| ||||||||| |||||||||||    
T  32268033 tttttgacttttagaaagttgaattcaacacttttcaccatttttcaacaaattatttttatttatgttc 32268102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 180 - 239
Target Start/End: Original strand, 6613992 - 6614051
Alignment:
Q  180 gactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcag 239  Q
    ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  6613992 gactaaaatgataactgaagtgcagagtcagagacttatttgtatttaatcctgagtcag 6614051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 55 - 239
Target Start/End: Original strand, 50107091 - 50107275
Alignment:
Q  55 attttcgattcagggaccaaagtggccattttcgactttcactttagtccccgtgacacgtcatactccttgtcagcataagccaagtgccacatcatca 154  Q
    ||||||| || | ||||||||||| |||| | | |||||||| |||||||  ||||||| |||||||||||||||||||||  |   || ||  ||||||    
T  50107091 attttcggttaaaggaccaaagtgaccatgtcctactttcacgttagtccatgtgacacctcatactccttgtcagcataaaacctttgtcatgtcatca 50107190  T
Q  155 cttaacnnnnnnntttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcag 239  Q
     |||||       ||||||| ||  |||||||||||||||||||||||| | |||||||||  ||||||||||||||||| ||||    
T  50107191 gttaacataattatttaacgccaaggactaaagtgataacggaagtgcacattcagagactattttgtatttaatcctgaatcag 50107275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 317 - 409
Target Start/End: Original strand, 13925101 - 13925191
Alignment:
Q  317 ggaaattattactttttaacttttagaaagttgaattcaacatttttcaccatttttcaagaaattatttctatttatgttcctcttaaccaa 409  Q
    ||||||||  ||||||| ||||||||| ||||||||| |||| ||||||| ||||||||| |||||||||||||||||||| |||||||||||    
T  13925101 ggaaattacaactttttgacttttagatagttgaatt-aacacttttcactatttttcaacaaattatttctatttatgtt-ctcttaaccaa 13925191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 179 - 280
Target Start/End: Complemental strand, 1001265 - 1001164
Alignment:
Q  179 agactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaa 278  Q
    |||||||| ||||||| |||||||| | |||||||||  |||||||||||||| |||||| ||| || |||| || ||||||||| ||||| ||||||||    
T  1001265 agactaaactgataacagaagtgcacattcagagactactttgtatttaatcccgagtcatggacctttgtggcaacgaggtgcaaagtcatggactaaa 1001166  T
Q  279 gt 280  Q
    ||    
T  1001165 gt 1001164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 48 - 282
Target Start/End: Original strand, 11060666 - 11060899
Alignment:
Q  48 gatatcgattttcgattcagggaccaaagtggccattttcgactttcactttagtccccgtgacacgtcatactccttgtcagcataagccaagtgccac 147  Q
    ||||| |||||||  |||||||| ||||||| | |||||| |||||||||||||||   |||| || |||||| ||||||||| ||||  |   | ||||    
T  11060666 gatattgattttctgttcagggatcaaagtgacaattttctactttcactttagtcattgtga-acctcataccccttgtcagaataaaaccttttccac 11060764  T
Q  148 atcatcacttaacnnnnnnntttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctat 247  Q
     |||||| |||||       ||||||| | | |||||||||||||||| ||||||  | |||| ||||  ||||||||||||  ||||||| ||| || |    
T  11060765 gtcatcagttaacagaattatttaacgtcggggactaaagtgataacgaaagtgcccattcagggactattttgtatttaattttgagtcatggaccttt 11060864  T
Q  248 gtgacagcgaggtgcacagtcagggactaaagtga 282  Q
    |||||||||||||||| ||||| |||  |||||||    
T  11060865 gtgacagcgaggtgcatagtcaaggatcaaagtga 11060899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 48 - 282
Target Start/End: Complemental strand, 44719592 - 44719358
Alignment:
Q  48 gatatcgattttcgattcagggaccaaagtggccattttcgactttcactttagtccccgtgacacgtcatactccttgtcagcataagccaagtgccac 147  Q
    ||||| |||||||  |||||||| ||||||| | |||||| ||||||| |||||| |  ||||||| |  ||| |||||| |||||||  |   ||||||    
T  44719592 gatattgattttcagttcagggagcaaagtgacaattttctactttcattttagttcatgtgacacattgtaccccttgttagcataaaacctttgccac 44719493  T
Q  148 atcatcacttaacnnnnnnntttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctat 247  Q
    | ||||| | |||       ||||| ||||||||||||| |||||||||||||||| | ||| | |||  ||| ||||||||||||||| || ||||| |    
T  44719492 aacatcaatgaacaaaattatttaaagacagagactaaaatgataacggaagtgcatattcataaactactttatatttaatcctgagttagagatcttt 44719393  T
Q  248 gtgacagcgaggtgcacagtcagggactaaagtga 282  Q
    |||||| |||| |||| ||||| |||  |||||||    
T  44719392 gtgacaacgagatgcaaagtcaaggatcaaagtga 44719358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 182 - 278
Target Start/End: Complemental strand, 3117757 - 3117661
Alignment:
Q  182 ctaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaa 278  Q
    |||||||||||||||||||| ||||||||||| || ||||||||||||| |||||||| || || ||||| | ||| ||| | ||| ||||||||||    
T  3117757 ctaaagtgataacggaagtggagagtcagagatttctttgtatttaatcttgagtcagagacctttgtgataacgatgtgaagagttagggactaaa 3117661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 9340800 - 9340844
Alignment:
Q  1 taactgatagtaagtatgcacagtcagggacctaacagtaagttg 45  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  9340800 taactgatagtaagtatgcacagtcagggacctaacagtaagttg 9340844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 188 - 280
Target Start/End: Complemental strand, 44020088 - 44019996
Alignment:
Q  188 tgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagt 280  Q
    |||||||| |||||||||||||||||||| ||| ||||||||| |||||||| ||  | ||||||| |||| |||| |||||||||| |||||    
T  44020088 tgataacgtaagtgcagagtcagagacttctttatatttaatcttgagtcagagacttttgtgacaacgagttgcaaagtcagggaccaaagt 44019996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 534311 - 534382
Alignment:
Q  1 taactgatagtaagtatgcacagtcagggacctaacagtaagttgaagatatcgattttcgattcagggacc 72  Q
    ||||||| ||||||||| |||||||| |||||||||| ||| |||| ||||| |||||||||||||||||||    
T  534311 taactgacagtaagtatacacagtcaaggacctaacaataaattgaggatattgattttcgattcagggacc 534382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 81 - 280
Target Start/End: Complemental strand, 51450209 - 51450011
Alignment:
Q  81 cattttcgactttcactttagtccccgtgacacgtcatactccttgtcagcataagccaagtgccacatcatcacttaacnnnnnnntttaacgacagag 180  Q
    ||||||| ||||||| ||||||||| ||||||| |||||   | ||||| | |||  || ||| ||||||| ||||||||       ||||||| ||||     
T  51450209 cattttctactttcagtttagtccctgtgacacctcatatgacatgtcatcgtaaaacatgtgtcacatcaccacttaacaaaattatttaacgtcagat 51450110  T
Q  181 actaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagt 280  Q
    |||||| ||||| || ||||||||||||||| |||| |||| |||||||  ||||| ||| | || |||||| |||||||||| |||||| | |||||||    
T  51450109 actaaaatgata-cgaaagtgcagagtcagaaacttctttgcatttaattatgagttaggaacctttgtgacggcgaggtgcagagtcagcggctaaagt 51450011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 335 - 412
Target Start/End: Complemental strand, 1107462 - 1107386
Alignment:
Q  335 acttttagaaagttgaattcaacatttttcaccatttttcaagaaattatttctatttatgttcctcttaaccaatgc 412  Q
    |||||||| ||||||||||||||| |||||||| ||| | || ||||||||| |||||||||| ||||||||||||||    
T  1107462 acttttaggaagttgaattcaacacttttcaccgtttattaacaaattatttttatttatgtt-ctcttaaccaatgc 1107386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 181 - 242
Target Start/End: Complemental strand, 25037987 - 25037926
Alignment:
Q  181 actaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcaggga 242  Q
    ||||||||||||||| |||| ||||||||| ||||| ||||||||||||| |||||||||||    
T  25037987 actaaagtgataacgtaagtccagagtcagtgacttctttgtatttaatcatgagtcaggga 25037926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 181 - 242
Target Start/End: Complemental strand, 25043199 - 25043138
Alignment:
Q  181 actaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcaggga 242  Q
    ||||||||||||||| |||| ||||||||| ||||| ||||||||||||| |||||||||||    
T  25043199 actaaagtgataacgtaagtccagagtcagtgacttctttgtatttaatcatgagtcaggga 25043138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 183 - 263
Target Start/End: Original strand, 534574 - 534653
Alignment:
Q  183 taaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgca 263  Q
    |||||||||||| |||||| |||||||| ||||| ||||||||||||||||| ||| | | |||||| |||||||||||||    
T  534574 taaagtgataacagaagtgtagagtcag-gacttgtttgtatttaatcctgaatcaagaacctatgtaacagcgaggtgca 534653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 335 - 429
Target Start/End: Original strand, 39421026 - 39421126
Alignment:
Q  335 acttttagaaagttgaattcaacatttttca-------ccatttttcaagaaattatttctatttatgttcctcttaaccaatgcacaaaggacactctt 427  Q
    |||||||||||||||||||||||| ||||||       || |||||||| |||||||||||||||||||| |||||||||||||  | ||||||||| ||    
T  39421026 acttttagaaagttgaattcaacacttttcagtttccaccgtttttcaacaaattatttctatttatgtt-ctcttaaccaatgtcccaaggacactgtt 39421124  T
Q  428 ta 429  Q
    ||    
T  39421125 ta 39421126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 32664865 - 32664824
Alignment:
Q  1 taactgatagtaagtatgcacagtcagggacctaacagtaag 42  Q
    |||||||||||||||||||||| |||||||||||||||||||    
T  32664865 taactgatagtaagtatgcacaatcagggacctaacagtaag 32664824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 7945334 - 7945378
Alignment:
Q  1 taactgatagtaagtatgcacagtcagggacctaacagtaagttg 45  Q
    ||||||||||||||||||||||||||| ||||||||| |||||||    
T  7945334 taactgatagtaagtatgcacagtcagagacctaacaataagttg 7945378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 63 - 119
Target Start/End: Original strand, 9340941 - 9340997
Alignment:
Q  63 ttcagggaccaaagtggccattttcgactttcactttagtccccgtgacacgtcata 119  Q
    |||||||||||||||| |||||||| ||||||||||| ||||| ||||||| |||||    
T  9340941 ttcagggaccaaagtgaccattttctactttcactttggtccctgtgacacctcata 9340997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 317 - 365
Target Start/End: Complemental strand, 12173221 - 12173173
Alignment:
Q  317 ggaaattattactttttaacttttagaaagttgaattcaacatttttca 365  Q
    ||||||||| ||||||| ||||||| |||||||||||||||||||||||    
T  12173221 ggaaattataactttttgacttttacaaagttgaattcaacatttttca 12173173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 45
Target Start/End: Complemental strand, 25038240 - 25038197
Alignment:
Q  2 aactgatagtaagtatgcacagtcagggacctaacagtaagttg 45  Q
    ||||||||||||||||||||||| |||||||||||| |||||||    
T  25038240 aactgatagtaagtatgcacagtaagggacctaacaataagttg 25038197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 45
Target Start/End: Complemental strand, 25043452 - 25043409
Alignment:
Q  2 aactgatagtaagtatgcacagtcagggacctaacagtaagttg 45  Q
    ||||||||||||||||||||||| |||||||||||| |||||||    
T  25043452 aactgatagtaagtatgcacagtaagggacctaacaataagttg 25043409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 107 - 195
Target Start/End: Complemental strand, 33342599 - 33342511
Alignment:
Q  107 gtgacacgtcatactccttgtcagcataagccaagtgccacatcatcacttaacnnnnnnntttaacgacagagactaaagtgataacg 195  Q
    ||||||| |||||||||||||||||||||  |   || ||||||||||||||||       ||||||| ||||||||||||||||||||    
T  33342599 gtgacacctcatactccttgtcagcataaaacttttgtcacatcatcacttaacataattatttaacgtcagagactaaagtgataacg 33342511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 183 - 230
Target Start/End: Original strand, 34088485 - 34088532
Alignment:
Q  183 taaagtgataacggaagtgcagagtcagagacttatttgtatttaatc 230  Q
    ||||||||||  |||||||||||||||||||||| |||||||||||||    
T  34088485 taaagtgatagtggaagtgcagagtcagagacttctttgtatttaatc 34088532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 291 - 365
Target Start/End: Complemental strand, 46289705 - 46289632
Alignment:
Q  291 aaactaaaagtaataattttgcacccggaaattattactttttaacttttagaaagttgaattcaacatttttca 365  Q
    |||||||||||| || |||||||   ||||||||  ||||||||||||||| ||||| |||||||||||||||||    
T  46289705 aaactaaaagtagtagttttgcatt-ggaaattacaactttttaacttttaaaaagtcgaattcaacatttttca 46289632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 337 - 397
Target Start/End: Original strand, 3894800 - 3894861
Alignment:
Q  337 ttttagaaagttgaattcaacatttttcaccatttttc-aagaaattatttctatttatgtt 397  Q
    ||||| |||| | ||||||||||||||||| ||||||| || ||||||||||||||||||||    
T  3894800 ttttaaaaagctaaattcaacatttttcactatttttctaacaaattatttctatttatgtt 3894861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 112
Target Start/End: Complemental strand, 9339868 - 9339804
Alignment:
Q  48 gatatcgattttcgattcagggaccaaagtggccattttcgactttcactttagtccccgtgaca 112  Q
    ||||| |||||| | ||||| |||||||||| |||||||| ||||||||||| ||||| ||||||    
T  9339868 gatattgatttttggttcagagaccaaagtgaccattttctactttcactttggtccctgtgaca 9339804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 55 - 135
Target Start/End: Complemental strand, 11059851 - 11059771
Alignment:
Q  55 attttcgattcagggaccaaagtggccattttcgactttcactttagtccccgtgacacgtcatactccttgtcagcataa 135  Q
    ||||||| || ||||| ||||||| | |||||  || | |||||||||||| ||||||| ||||||||||||||| |||||    
T  11059851 attttcggttgagggatcaaagtgacaattttttacctccactttagtccctgtgacacctcatactccttgtcaccataa 11059771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 63 - 119
Target Start/End: Original strand, 32665686 - 32665742
Alignment:
Q  63 ttcagggaccaaagtggccattttcgactttcactttagtccccgtgacacgtcata 119  Q
    |||||||||||||||| |||||||| ||||||||||| ||||  ||||||| |||||    
T  32665686 ttcagggaccaaagtgaccattttctactttcactttggtccttgtgacacctcata 32665742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 52439821 - 52439781
Alignment:
Q  5 tgatagtaagtatgcacagtcagggacctaacagtaagttg 45  Q
    ||||||||||||||| |||||||||||||||||||| ||||    
T  52439821 tgatagtaagtatgcgcagtcagggacctaacagtaggttg 52439781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 362 - 429
Target Start/End: Complemental strand, 46289645 - 46289579
Alignment:
Q  362 ttcaccatttttcaagaaattatttctatttatgttcctcttaaccaatgcacaaaggacactcttta 429  Q
    |||| |||||||||| ||||||||||||||||| || || ||||||||||| | || |||||||||||    
T  46289645 ttcaacatttttcaacaaattatttctatttatatt-cttttaaccaatgccctaaagacactcttta 46289579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 329 - 375
Target Start/End: Original strand, 27210749 - 27210795
Alignment:
Q  329 tttttaacttttagaaagttgaattcaacatttttcaccatttttca 375  Q
    ||||||||||||| |||||| |||| | |||||||||||||||||||    
T  27210749 tttttaacttttaaaaagttaaattgatcatttttcaccatttttca 27210795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 330 - 392
Target Start/End: Complemental strand, 41898940 - 41898878
Alignment:
Q  330 ttttaacttttagaaagttgaattcaacatttttcaccatttttcaagaaattatttctattt 392  Q
    |||||||||||| |||||| |||||| || |||| |||||||||||| | | |||||||||||    
T  41898940 ttttaacttttaaaaagttaaattcatcactttttaccatttttcaatacaatatttctattt 41898878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 101
Target Start/End: Complemental strand, 16249885 - 16249832
Alignment:
Q  48 gatatcgattttcgattcagggaccaaagtggccattttcgactttcactttag 101  Q
    ||||| |||||||| ||||||||| ||| || |||||||| |||||||||||||    
T  16249885 gatattgattttcggttcagggactaaaatgaccattttctactttcactttag 16249832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 75; Significance: 4e-34; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 180 - 282
Target Start/End: Original strand, 53771062 - 53771164
Alignment:
Q  180 gactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaag 279  Q
    ||||||||||||||||||||||||||||||| | ||| |||||||||||| |||||||||||| |||||||||| ||||||||| |||||||||||||||    
T  53771062 gactaaagtgataacggaagtgcagagtcaggggcttctttgtatttaattctgagtcagggacctatgtgacaacgaggtgcagagtcagggactaaag 53771161  T
Q  280 tga 282  Q
    |||    
T  53771162 tga 53771164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 49 - 282
Target Start/End: Original strand, 26172822 - 26173057
Alignment:
Q  49 atatcgattttcgattcagggaccaaagtggccattttcgactttcactttagtccccgtgacacgtcatactccttgtcagcataagccaagtgccaca 148  Q
    |||| |||||| |||||||| || ||||||   |||||| ||| |||||||||||   ||||||| |||||||||||||   |||||  || ||||||||    
T  26172822 atattgatttttgattcaggaactaaagtgattattttctactgtcactttagtcattgtgacacctcatactccttgttgacataaaacatgtgccaca 26172921  T
Q  149 tcatcactt--aacnnnnnnntttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatcta 246  Q
    | |||||||  |||       ||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||     
T  26172922 ttatcacttttaacataattttttaacggcatggactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcttgagtcaaggacctt 26173021  T
Q  247 tgtgacagcgaggtgcacagtcagggactaaagtga 282  Q
    | ||||||  ||||||| |||  |||||||||||||    
T  26173022 tctgacagtaaggtgcatagttggggactaaagtga 26173057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 180 - 282
Target Start/End: Original strand, 47878497 - 47878599
Alignment:
Q  180 gactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaag 279  Q
    |||||||||||||||||||||| |||||||| |||||||||||||||||||| |||||||||| |||||| ||||||||||||| |||||||||  ||||    
T  47878497 gactaaagtgataacggaagtgtagagtcagggacttatttgtatttaatccagagtcagggacctatgtaacagcgaggtgcagagtcagggatcaaag 47878596  T
Q  280 tga 282  Q
    |||    
T  47878597 tga 47878599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 144 - 282
Target Start/End: Complemental strand, 42278195 - 42278057
Alignment:
Q  144 ccacatcatcacttaacnnnnnnntttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggat 243  Q
    |||||||||||||||||       ||||||| ||| || ||||||||||||||||||||||||||||  ||||||||||||||||||| ||||||||||     
T  42278195 ccacatcatcacttaacagatttttttaacgtcagggattaaagtgataacggaagtgcagagtcaggaacttatttgtatttaatcccgagtcagggac 42278096  T
Q  244 ctatgtgacagcgaggtgcacagtcagggactaaagtga 282  Q
    |||||||||||| || |||| | ||| ||||||||||||    
T  42278095 ctatgtgacagcaagctgcagaatcaaggactaaagtga 42278057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 180 - 293
Target Start/End: Complemental strand, 47874674 - 47874559
Alignment:
Q  180 gactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaag 279  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||||||| ||||||||||| |||||||| |||||| |||| | |||| ||||||||    
T  47874674 gactaaagtgataacggaagtgcagaatcagggacttatttgtatttaatcttgagtcagggacctatgtgatagcgagctgcagaatcagagactaaag 47874575  T
Q  280 tga--atttactcaaa 293  Q
    |||  |||||||||||    
T  47874574 tgactatttactcaaa 47874559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 171 - 282
Target Start/End: Complemental strand, 31844841 - 31844730
Alignment:
Q  171 aacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcag 270  Q
    |||||||| ||| |||||||||| ||||||| ||||| || ||||| ||||||||||||||||||||||||| |||||||||||||||||||| ||  ||    
T  31844841 aacgacagtgaccaaagtgataagggaagtgtagagttagggacttgtttgtatttaatcctgagtcagggacctatgtgacagcgaggtgcagagctag 31844742  T
Q  271 ggactaaagtga 282  Q
    ||||||||||||    
T  31844741 ggactaaagtga 31844730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 168 - 282
Target Start/End: Complemental strand, 53770455 - 53770341
Alignment:
Q  168 tttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagt 267  Q
    ||||||| ||||||||| |||||||| ||||||||||||||| |||||| |||||||||||| |||||||||| | ||||||||  |||||||||| |||    
T  53770455 tttaacggcagagactagagtgataatggaagtgcagagtcatagacttctttgtatttaattctgagtcaggaacctatgtgaatgcgaggtgcagagt 53770356  T
Q  268 cagggactaaagtga 282  Q
    ||| |||||||||||    
T  53770355 cagagactaaagtga 53770341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 145 - 280
Target Start/End: Complemental strand, 39869065 - 39868932
Alignment:
Q  145 cacatcatcacttaacnnnnnnntttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatc 244  Q
    ||||||||||||||||       ||||||| ||||||||||||||||||||||||||||||||| || |||| ||||||||||||  ||||||||||| |    
T  39869065 cacatcatcacttaacataattatttaacgtcagagactaaagtgataacggaagtgcagagtc-ga-acttgtttgtatttaattatgagtcagggacc 39868968  T
Q  245 tatgtgacagcgaggtgcacagtcagggactaaagt 280  Q
    | ||| ||||||||||||| |||||| |||||||||    
T  39868967 tttgtaacagcgaggtgcagagtcagagactaaagt 39868932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 54 - 274
Target Start/End: Original strand, 21623004 - 21623224
Alignment:
Q  54 gattttcgattcagggaccaaagtggccattttcgactttcactttagtccccgtgacacgtcatactccttgtcagcataagccaagtgccacatcatc 153  Q
    |||||||| ||||  || ||||||| |||||||| ||||||| ||||||| | ||||||| |||||||||||||||| ||||  |  ||||||||||||     
T  21623004 gattttcggttcatagagcaaagtgaccattttctactttcattttagtctctgtgacacctcatactccttgtcagtataaaacttgtgccacatcatt 21623103  T
Q  154 acttaacnnnnnnntttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgaca 253  Q
    | |||||       ||||||| | | ||||||||||||||| |||||||| | |||  ||||  ||||||||||||||||| ||||||| |  |||||||    
T  21623104 agttaacataattatttaacgtcggggactaaagtgataacagaagtgcacattcaaggactattttgtatttaatcctgaatcagggaacattgtgaca 21623203  T
Q  254 gcgaggtgcacagtcagggac 274  Q
     |||| |||| ||||| ||||    
T  21623204 acgagatgcagagtcaaggac 21623224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 176 - 282
Target Start/End: Original strand, 4703226 - 4703332
Alignment:
Q  176 cagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggact 275  Q
    |||||||||||||||||||||||||| | ||||| |||||| |||||||||||| |||||| ||||| ||||||||||||||| || | ||||||  |||    
T  4703226 cagagactaaagtgataacggaagtgtacagtcaaagacttctttgtatttaattctgagttagggacctatgtgacagcgagatgtagagtcagtaact 4703325  T
Q  276 aaagtga 282  Q
    |||||||    
T  4703326 aaagtga 4703332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 168 - 282
Target Start/End: Original strand, 48740021 - 48740135
Alignment:
Q  168 tttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagt 267  Q
    ||||||| ||| ||||||||||||||| ||||||||||||  | ||||| ||||||||||||  ||||||||||||||| ||||||  |||||||| ||     
T  48740021 tttaacgtcagggactaaagtgataacagaagtgcagagttggggacttctttgtatttaattatgagtcagggatctacgtgacaatgaggtgcagaga 48740120  T
Q  268 cagggactaaagtga 282  Q
    || ||||||||||||    
T  48740121 catggactaaagtga 48740135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 97 - 278
Target Start/End: Complemental strand, 26170833 - 26170652
Alignment:
Q  97 tttagtccccgtgacacgtcatactccttgtcagcataagccaagtgccacatcatcacttaacnnnnnnntttaacgacagagactaaagtgataacgg 196  Q
    |||| ||||| || ||| |||||||||||||||||||||  || ||| ||||||||||||||||       ||||||  ||  |||||||||||||| ||    
T  26170833 tttaatccccctggcacctcatactccttgtcagcataaaacatgtgtcacatcatcacttaacaaaattttttaacagcatggactaaagtgataatgg 26170734  T
Q  197 aagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaa 278  Q
    ||||||||||| ||  |||||||||||||||||| | ||||||  |  | ||| ||| ||||||||| |||||| |||||||    
T  26170733 aagtgcagagtaaggaacttatttgtatttaatcttaagtcagatacttttgtaacaacgaggtgcaaagtcagagactaaa 26170652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 183 - 263
Target Start/End: Complemental strand, 54574532 - 54574452
Alignment:
Q  183 taaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgca 263  Q
    ||||||||||||||||||||||||| |   ||||||||||||||||||||||||||| || ||||||||||||||| ||||    
T  54574532 taaagtgataacggaagtgcagagttaagaacttatttgtatttaatcctgagtcagagacctatgtgacagcgagatgca 54574452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 317 - 412
Target Start/End: Complemental strand, 4867866 - 4867772
Alignment:
Q  317 ggaaattattactttttaacttttagaaagttgaattcaacatttttcaccatttttcaagaaattatttctatttatgttcctcttaaccaatgc 412  Q
    ||||||||  ||||||| ||||||| ||| |||||||||||| ||||||||| ||||||| ||||||||| |||||||||| ||||||||||||||    
T  4867866 ggaaattacaactttttgacttttaaaaatttgaattcaacacttttcaccacttttcaacaaattatttttatttatgtt-ctcttaaccaatgc 4867772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 48 - 230
Target Start/End: Complemental strand, 19050478 - 19050298
Alignment:
Q  48 gatatcgattttcgattcagggaccaaagtggccattttcgactttcactttagtccccgtgacacgtcatactccttgtcagcataagccaagtgccac 147  Q
    ||||| |||||| | |||| |||||||||||  ||||||  ||||||||||||||||  ||||||| |||||  || | ||| | |||  || ||  |||    
T  19050478 gatattgatttttgcttcaaggaccaaagtgatcattttatactttcactttagtccatgtgacacctcatatgccatatcatcgtaaaacatgt--cac 19050381  T
Q  148 atcatcacttaacnnnnnnntttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatc 230  Q
    ||||||||||||        ||||||| | ||||||||||||||||||||||||||||||| ||||||| |||||||||||||    
T  19050380 atcatcacttaatagaattatttaacgtcggagactaaagtgataacggaagtgcagagtccgagacttctttgtatttaatc 19050298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 176 - 278
Target Start/End: Original strand, 26685431 - 26685528
Alignment:
Q  176 cagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggact 275  Q
    |||||||||||||||||||||||||||| |||||  ||||| | |||||||||     ||| ||||| |||||||||||||||||||| |||||||||||    
T  26685431 cagagactaaagtgataacggaagtgcatagtcaaggacttctatgtatttaa-----agtgagggacctatgtgacagcgaggtgcagagtcagggact 26685525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 327 - 412
Target Start/End: Complemental strand, 45674248 - 45674164
Alignment:
Q  327 actttttaacttttagaaagttgaattcaacatttttcaccatttttcaagaaattatttctatttatgttcctcttaaccaatgc 412  Q
    ||||||||||||| |||||||||||||||||| ||||||| ||||||||| |||||| |||||||||| || || |||||||||||    
T  45674248 actttttaactttaagaaagttgaattcaacacttttcactatttttcaacaaattaattctatttat-tttcttttaaccaatgc 45674164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 63 - 242
Target Start/End: Complemental strand, 21622050 - 21621871
Alignment:
Q  63 ttcagggaccaaagtggccattttcgactttcactttagtccccgtgacacgtcatactccttgtcagcataagccaagtgccacatcatcacttaacnn 162  Q
    |||||| | ||||||| |||||||  |||||||||||||| |  ||||||| |||||||||| |||||| |||      || |||||||||| |||||      
T  21622050 ttcaggaatcaaagtgaccattttatactttcactttagtgcttgtgacacatcatactcctcgtcagcgtaaaatctttgtcacatcatcagttaacat 21621951  T
Q  163 nnnnntttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcaggga 242  Q
         ||||||  ||| |||||||||||||||||||||||| | |||  ||||  |||||||||||||||||||||||||    
T  21621950 aattatttaacatcagggactaaagtgataacggaagtgcacattcaatgactattttgtatttaatcctgagtcaggga 21621871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 168 - 282
Target Start/End: Original strand, 39870675 - 39870789
Alignment:
Q  168 tttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagt 267  Q
    ||||||| | |||||| |||||||| ||||||||||||||||| || || | ||| ||||||| ||| ||||| |  ||||||||||||||||||| |||    
T  39870675 tttaacgcctgagactgaagtgatatcggaagtgcagagtcagtgatttctctgtgtttaatcttgactcaggaacttatgtgacagcgaggtgcagagt 39870774  T
Q  268 cagggactaaagtga 282  Q
    ||| || ||||||||    
T  39870775 cagagattaaagtga 39870789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 189 - 282
Target Start/End: Original strand, 19051253 - 19051346
Alignment:
Q  189 gataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagtga 282  Q
    ||||||| ||||| |||||||||||||| |||||||||||||  ||||||| || || |||| || ||||||| | ||||||||||||||||||    
T  19051253 gataacgaaagtgtagagtcagagacttctttgtatttaatctcgagtcagtgacctttgtgccaacgaggtgtagagtcagggactaaagtga 19051346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 55 - 240
Target Start/End: Complemental strand, 6039356 - 6039171
Alignment:
Q  55 attttcgattcagggaccaaagtggccattttcgactttcactttagtccccgtgacacgtcatactccttgtcagcataagccaagtgccacatcatca 154  Q
    ||||||| |||||||| ||||||| |||||||| ||  ||||||| |||||  |||||| |||||||| ||||||||||||   | ||| ||| ||||||    
T  6039356 attttcggttcagggagcaaagtgaccattttctacactcactttggtccctatgacacctcatactcattgtcagcataaaatatgtgtcacgtcatca 6039257  T
Q  155 cttaacnnnnnnntttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagg 240  Q
     |||||        |||||| ||  ||||||| ||||| | |||||||| || ||||||||||||| ||||||||  |||||||||    
T  6039256 tttaacaaattttattaacggcacggactaaaatgataccagaagtgcatagccagagacttatttatatttaattttgagtcagg 6039171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 145 - 242
Target Start/End: Complemental strand, 50694894 - 50694797
Alignment:
Q  145 cacatcatcacttaacnnnnnnntttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcaggga 242  Q
    ||||||||||||||||       ||||||| ||| |||||||| ||||||||||||||||| ||||| |||||||| ||||||||  |||||||||||    
T  50694894 cacatcatcacttaacagaattttttaacgtcagggactaaagagataacggaagtgcagaatcagaaacttatttatatttaattttgagtcaggga 50694797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 184 - 238
Target Start/End: Original strand, 54574822 - 54574876
Alignment:
Q  184 aaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtca 238  Q
    ||||||||||| |||||||||||| ||||| ||||||||||||||||||||||||    
T  54574822 aaagtgataacagaagtgcagagttagagatttatttgtatttaatcctgagtca 54574876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 69 - 239
Target Start/End: Original strand, 31844866 - 31845027
Alignment:
Q  69 gaccaaagtggccattttcgactttcactttagtccccgtgacacgtcatactccttgtcagcataagccaagtgccacatcatcacttaacnnnnnnnt 168  Q
    |||||||||| |||||||  ||||||||||||||||  ||||||||||||||||||||| |||         ||| ||||||||||||||||       |    
T  31844866 gaccaaagtgaccattttttactttcactttagtccttgtgacacgtcatactccttgttagc---------gtgtcacatcatcacttaacatattttt 31844956  T
Q  169 ttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcag 239  Q
    |||||  ||  ||| ||| |||||||||||||| ||||||  | | || ||||||||||||||||||||||    
T  31844957 ttaactgcaaggacgaaaatgataacggaagtgtagagtctaaaatttgtttgtatttaatcctgagtcag 31845027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 212 - 293
Target Start/End: Original strand, 42391933 - 42392016
Alignment:
Q  212 gacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagtga--atttactcaaa 293  Q
    |||| |||||||||||||| |||||||| || ||||||||||| |||||||  |||||| |||||||||||  |||||||||||    
T  42391933 gactaatttgtatttaatcatgagtcagagacctatgtgacagtgaggtgcggagtcagagactaaagtgatcatttactcaaa 42392016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 54574788 - 54574744
Alignment:
Q  1 taactgatagtaagtatgcacagtcagggacctaacagtaagttg 45  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  54574788 taactgatagtaagtatgcacagttagggacctaacagtaagttg 54574744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 63 - 261
Target Start/End: Complemental strand, 4701990 - 4701794
Alignment:
Q  63 ttcagggaccaaagtggccattttcgactttcactttagtccccgtgacacgtcatactccttgtcagcataagccaagtgccacatcatcacttaacnn 162  Q
    |||||||||||||||| | |||||| ||||||||||||||||  ||||||| |||| |  |  |||| | |||  |  |||  | |||||||||||||      
T  4701990 ttcagggaccaaagtgactattttctactttcactttagtccatgtgacacttcatgccac--gtcatcgtaaaacttgtgtaatatcatcacttaacag 4701893  T
Q  163 nnnnntttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtg 261  Q
         ||||||  ||| ||||||||||||| |||||||||| |||| | ||||| ||||||||||||| | |||||  || || |||||||||||||||    
T  4701892 aattatttaacatcagggactaaagtgatagcggaagtgcatagtcggggacttctttgtatttaatcataagtcatagacctttgtgacagcgaggtg 4701794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 19051117 - 19051162
Alignment:
Q  1 taactgatagtaagtatgcacagtcagggacctaacagtaagttga 46  Q
    ||||||||||||| ||||||||||||||||||||||| ||||||||    
T  19051117 taactgatagtaaatatgcacagtcagggacctaacaataagttga 19051162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 327 - 384
Target Start/End: Original strand, 45683989 - 45684046
Alignment:
Q  327 actttttaacttttagaaagttgaattcaacatttttcaccatttttcaagaaattat 384  Q
    ||||||||||||||| ||| |||||||||||| ||||||||| ||||||| |||||||    
T  45683989 actttttaacttttataaatttgaattcaacacttttcaccacttttcaacaaattat 45684046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 48 - 135
Target Start/End: Complemental strand, 32244516 - 32244429
Alignment:
Q  48 gatatcgattttcgattcagggaccaaagtggccattttcgactttcactttagtccccgtgacacgtcatactccttgtcagcataa 135  Q
    ||||| |||||||| | ||| || ||||||| |||||||  ||||||||||||||| | |||||||  ||||||| ||||||||||||    
T  32244516 gatattgattttcggtgcagagatcaaagtgaccattttttactttcactttagtctctgtgacaccccatactctttgtcagcataa 32244429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 48 - 119
Target Start/End: Complemental strand, 42278271 - 42278200
Alignment:
Q  48 gatatcgattttcgattcagggaccaaagtggccattttcgactttcactttagtccccgtgacacgtcata 119  Q
    ||||| |||||| | |||||||||||||||| |||||||| | ||||||||| ||||| ||||||| |||||    
T  42278271 gatattgatttttggttcagggaccaaagtgaccattttctagtttcactttggtccctgtgacacctcata 42278200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 203 - 278
Target Start/End: Complemental strand, 44158591 - 44158516
Alignment:
Q  203 agagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaa 278  Q
    |||||||| ||||| ||||||||||||||||||||||| | || ||| ||| ||||||||| |||| ||| |||||    
T  44158591 agagtcagggacttctttgtatttaatcctgagtcaggaacctctgtaacaacgaggtgcagagtcgggggctaaa 44158516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 89 - 135
Target Start/End: Original strand, 32244610 - 32244656
Alignment:
Q  89 actttcactttagtccccgtgacacgtcatactccttgtcagcataa 135  Q
    ||||||||||||||| | ||||||| |||||||||||||||||||||    
T  32244610 actttcactttagtcactgtgacacctcatactccttgtcagcataa 32244656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 42278763 - 42278805
Alignment:
Q  1 taactgatagtaagtatgcacagtcagggacctaacagtaagt 43  Q
    ||||||||||||||||||||||| ||| |||||||||||||||    
T  42278763 taactgatagtaagtatgcacagccagagacctaacagtaagt 42278805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 49 - 119
Target Start/End: Original strand, 47878386 - 47878456
Alignment:
Q  49 atatcgattttcgattcagggaccaaagtggccattttcgactttcactttagtccccgtgacacgtcata 119  Q
    |||| |||||| | |||||||||||||||| |||||||| ||||||||||| |||||  |||||| |||||    
T  47878386 atattgatttttggttcagggaccaaagtgaccattttctactttcactttggtccctatgacacctcata 47878456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 63 - 119
Target Start/End: Original strand, 20599802 - 20599858
Alignment:
Q  63 ttcagggaccaaagtggccattttcgactttcactttagtccccgtgacacgtcata 119  Q
    |||||||||||||||| |||||||  ||||||| ||||||||| ||||||| |||||    
T  20599802 ttcagggaccaaagtgaccattttttactttcattttagtccctgtgacacctcata 20599858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 21622228 - 21622192
Alignment:
Q  1 taactgatagtaagtatgcacagtcagggacctaaca 37  Q
    ||||||||||||||||||||||||||| |||||||||    
T  21622228 taactgatagtaagtatgcacagtcagagacctaaca 21622192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 119
Target Start/End: Complemental strand, 47874785 - 47874714
Alignment:
Q  48 gatatcgattttcgattcagggaccaaagtggccattttcgactttcactttagtccccgtgacacgtcata 119  Q
    ||||| |||||| | |||| ||||||||||| |||||||  ||||||||||| ||||| ||||||| |||||    
T  47874785 gatattgatttttggttcaaggaccaaagtgaccattttatactttcactttggtccctgtgacacatcata 47874714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 45
Target Start/End: Complemental strand, 47874918 - 47874875
Alignment:
Q  2 aactgatagtaagtatgcacagtcagggacctaacagtaagttg 45  Q
    |||||||||||||||||  |||||||||||||||||||| ||||    
T  47874918 aactgatagtaagtatgttcagtcagggacctaacagtaggttg 47874875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 343 - 429
Target Start/End: Complemental strand, 29722152 - 29722067
Alignment:
Q  343 aaagttgaattcaacatttttcaccatttttcaagaaattatttctatttatgttcctcttaaccaatgcacaaaggacactcttta 429  Q
    |||||| |||||| ||||||||||||| |||||| | | ||| ||||||| |||||| | |||||||||| | |||| |||||||||    
T  29722152 aaagttaaattcatcatttttcaccatatttcaacacaatatatctatttttgttcc-cctaaccaatgccctaagggcactcttta 29722067  T

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Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 291 - 365
Target Start/End: Original strand, 35911151 - 35911224
Alignment:
Q  291 aaactaaaagtaataattttgcacccggaaattattactttttaacttttagaaagttgaattcaacatttttca 365  Q
    |||||||||||| ||||||||||   | ||||||| ||||||| ||||||| ||| |||||||||||| ||||||    
T  35911151 aaactaaaagtagtaattttgcatt-gaaaattataactttttgacttttaaaaatttgaattcaacacttttca 35911224  T

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Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 63 - 113
Target Start/End: Original strand, 42391802 - 42391852
Alignment:
Q  63 ttcagggaccaaagtggccattttcgactttcactttagtccccgtgacac 113  Q
    ||||||||| |||||| |||||||| ||||||||||||||||  |||||||    
T  42391802 ttcagggactaaagtgaccattttctactttcactttagtccatgtgacac 42391852  T

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Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 238
Target Start/End: Complemental strand, 2786330 - 2786273
Alignment:
Q  181 actaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtca 238  Q
    |||||| |||||||||||||||| | |||  || | ||||||||||||||||||||||    
T  2786330 actaaaatgataacggaagtgcacattcaaggagtaatttgtatttaatcctgagtca 2786273  T

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Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 24745793 - 24745830
Alignment:
Q  1 taactgatagtaagtatgcacagtcagggacctaacag 38  Q
    ||||||||||||| ||| ||||||||||||||||||||    
T  24745793 taactgatagtaattatacacagtcagggacctaacag 24745830  T

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Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 230
Target Start/End: Original strand, 25810415 - 25810476
Alignment:
Q  169 ttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatc 230  Q
    |||||| ||||||||||||||||| |||||||||| | ||| || ||  |||||||||||||    
T  25810415 ttaacgtcagagactaaagtgatagcggaagtgcacattcataggctactttgtatttaatc 25810476  T

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Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 329 - 410
Target Start/End: Complemental strand, 45257688 - 45257608
Alignment:
Q  329 tttttaacttttagaaagttgaattcaacatttttcaccatttttcaagaaattatttctatttatgttcctcttaaccaat 410  Q
    |||||| |||||| ||||||||||||| || |||||| || ||  ||| ||| ||||||||||| |||| ||||||||||||    
T  45257688 tttttagcttttaaaaagttgaattcaccacttttcaacacttcccaacaaaatatttctatttttgtt-ctcttaaccaat 45257608  T

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Target: scaffold0034 (Bit Score: 71; Significance: 1e-31; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 180 - 282
Target Start/End: Complemental strand, 116165 - 116063
Alignment:
Q  180 gactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaag 279  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||| ||||||||||||||| |||| | | ||| |||||||    
T  116165 gactaaagtgataacggaagtgcatagtcagggacttatttgtatttaatcctgagtcagggacctatgtgacagcgagctgcagaatgaggaactaaag 116066  T
Q  280 tga 282  Q
    |||    
T  116065 tga 116063  T

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Target: scaffold0039 (Bit Score: 69; Significance: 2e-30; HSPs: 3)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 49 - 278
Target Start/End: Complemental strand, 79314 - 79085
Alignment:
Q  49 atatcgattttcgattcagggaccaaagtggccattttcgactttcactttagtccccgtgacacgtcatactccttgtcagcataagccaagtgccaca 148  Q
    |||| ||||||  |||||||||||||||||  |||||||  |||||| ||||||||| |||| || |||||   | ||||| | |||  || ||| ||||    
T  79314 atattgattttttattcagggaccaaagtgatcattttcttctttcattttagtccctgtgagacctcatatgtcatgtcatcgtaaaacatgtgtcaca 79215  T
Q  149 tcatcacttaacnnnnnnntttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatg 248  Q
    ||||||||||||       ||||||| || |||||||||||||| |||| ||||| |||||  ||||| ||| ||||||||| ||||||| ||| |||||    
T  79214 tcatcacttaacaaaattatttaacgtcaaagactaaagtgatatcggaggtgcaaagtcaaggacttctttttatttaatcatgagtcaaggacctatg 79115  T
Q  249 tgacagcgaggtgcacagtcagggactaaa 278  Q
    ||||||||||||||| ||||||| ||||||    
T  79114 tgacagcgaggtgcagagtcaggaactaaa 79085  T

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Target: scaffold0039; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 168 - 282
Target Start/End: Original strand, 79684 - 79798
Alignment:
Q  168 tttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagt 267  Q
    ||||||| || |||||||| ||||||  ||| |||||||||| |||||| ||||||||||||| ||||||||| |  ||||| ||| ||||||||  |||    
T  79684 tttaacgtcaaagactaaaatgataatagaaatgcagagtcaaagacttctttgtatttaatcatgagtcaggaacttatgtaacaacgaggtgccgagt 79783  T
Q  268 cagggactaaagtga 282  Q
    |||||| ||||||||    
T  79784 cagggattaaagtga 79798  T

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Target: scaffold0039; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 185 - 278
Target Start/End: Original strand, 74331 - 74424
Alignment:
Q  185 aagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaa 278  Q
    |||||||| | || ||| |||||||  ||||| ||||||||||||| ||||| ||||| ||||||||||| ||| |||| ||||||||||||||    
T  74331 aagtgatatcagaggtgtagagtcaaggacttctttgtatttaatcatgagttagggacctatgtgacagtgagttgcagagtcagggactaaa 74424  T

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Target: scaffold0045 (Bit Score: 62; Significance: 2e-26; HSPs: 2)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 329 - 410
Target Start/End: Complemental strand, 62663 - 62583
Alignment:
Q  329 tttttaacttttagaaagttgaattcaacatttttcaccatttttcaagaaattatttctatttatgttcctcttaaccaat 410  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||  |||||||||||    
T  62663 tttttaacttttagaaagttgaattcaacacttttcaccatttttcaaaaaattatttctatttatgtt-atcttaaccaat 62583  T

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Target: scaffold0045; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 329 - 410
Target Start/End: Complemental strand, 69995 - 69915
Alignment:
Q  329 tttttaacttttagaaagttgaattcaacatttttcaccatttttcaagaaattatttctatttatgttcctcttaaccaat 410  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||  |||||||||||    
T  69995 tttttaacttttagaaagttgaattcaacacttttcaccatttttcaaaaaattatttctatttatgtt-atcttaaccaat 69915  T

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Target: scaffold0767 (Bit Score: 59; Significance: 1e-24; HSPs: 2)
Name: scaffold0767
Description:

Target: scaffold0767; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 168 - 282
Target Start/End: Complemental strand, 5721 - 5607
Alignment:
Q  168 tttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagt 267  Q
    ||||||| |||||||||||||||||||||||||| |||||||| ||||| |||||||||||| ||||||||| ||  | ||| ||| ||||||||| |||    
T  5721 tttaacgccagagactaaagtgataacggaagtgtagagtcagggacttctttgtatttaattctgagtcagagacatttgtcacaacgaggtgcaaagt 5622  T
Q  268 cagggactaaagtga 282  Q
     || |||||||||||    
T  5621 gagtgactaaagtga 5607  T

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Target: scaffold0767; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 278
Target Start/End: Original strand, 6264 - 6361
Alignment:
Q  181 actaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaa 278  Q
    |||||||||||||||||||| ||| ||||  || || ||| |||||||| |||| ||| ||| || | ||| ||||| ||||| ||||| ||||||||    
T  6264 actaaagtgataacggaagtacagtgtcatcgatttctttatatttaattctgaatcatggacctctatgatagcgaagtgcagagtcaaggactaaa 6361  T

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Target: scaffold0169 (Bit Score: 53; Significance: 6e-21; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 329 - 397
Target Start/End: Complemental strand, 9093 - 9025
Alignment:
Q  329 tttttaacttttagaaagttgaattcaacatttttcaccatttttcaagaaattatttctatttatgtt 397  Q
    ||||| ||||||| |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  9093 tttttgacttttaaaaagttgaattcaacacttttcaccatttttcaacaaattatttctatttatgtt 9025  T

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Target: scaffold0209 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0209
Description:

Target: scaffold0209; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 335 - 429
Target Start/End: Original strand, 29349 - 29441
Alignment:
Q  335 acttttagaaagttgaattcaacatttttcaccatttttcaagaaattatttctatttatgttcctcttaaccaatgcacaaaggacactcttta 429  Q
    ||||||||||||||||||| ||||||| ||||||||||| || ||||||||| |||||||||| |||||||| ||||  | ||||||||||||||    
T  29349 acttttagaaagttgaatt-aacatttctcaccattttttaacaaattatttttatttatgtt-ctcttaacgaatgttccaaggacactcttta 29441  T

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Target: scaffold0237 (Bit Score: 37; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 131
Target Start/End: Complemental strand, 3190 - 3106
Alignment:
Q  47 agatatcgattttcgattcagggaccaaagtggccattttcgactttcactttagtccccgtgacacgtcatactccttgtcagc 131  Q
    |||||| |||||||||||||| ||||||| || |||||||| |||| ||||||| |||  ||||||| |||| | ||||||||||    
T  3190 agatattgattttcgattcagagaccaaaatgaccattttctacttccactttaatccttgtgacacctcatgcaccttgtcagc 3106  T

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Target: scaffold0237; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 132
Target Start/End: Complemental strand, 1928 - 1843
Alignment:
Q  47 agatatcgattttcgattcagggaccaaagtggccattttcgactttcactttagtccccgtgacacgtcatactccttgtcagca 132  Q
    |||||| |||||||||||||| ||||||| || | |||||| |||| ||||||||| |  | ||||| |||| | |||||||||||    
T  1928 agatattgattttcgattcagagaccaaaatgactattttctacttccactttagttcttgcgacacctcatgcaccttgtcagca 1843  T

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Target: scaffold0369 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 232
Target Start/End: Original strand, 9137 - 9201
Alignment:
Q  168 tttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcct 232  Q
    ||||||| ||||||||||| |||||||  ||||||| | |||||||||  |||||||||||||||    
T  9137 tttaacgtcagagactaaactgataacaaaagtgcaaattcagagactattttgtatttaatcct 9201  T

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Target: scaffold0016 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 218 - 293
Target Start/End: Original strand, 36574 - 36650
Alignment:
Q  218 tttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagtg--aatttactcaaa 293  Q
    |||||||||||||| |||| || || || ||||||| |||||||||  ||||||||||||||||  ||||||||||||    
T  36574 tttgtatttaatcccgagttagagacctttgtgaca-cgaggtgcagggtcagggactaaagtgacaatttactcaaa 36650  T

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