View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11240_low_12 (Length: 375)
Name: NF11240_low_12
Description: NF11240
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11240_low_12 |
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Alignment Details
Target: chr8 (Bit Score: 328; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 328; E-Value: 0
Query Start/End: Original strand, 5 - 372
Target Start/End: Original strand, 34637885 - 34638252
Alignment:
| Q |
5 |
gaggagcagagacagttgctatactccttgaatggaccatggcaaggatggttttacatcaagacatacaaatgaaagcccgtcaagagatagacatttg |
104 |
Q |
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| T |
34637885 |
gaggaacagacacagttgctatactccttgaatggaccatggcaaggatggttttacatcaagacatacaaatgaaagcccgtcaagaaatagacatttg |
34637984 |
T |
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| Q |
105 |
tgttggccaaaacagtcatgtaagagactcagacattcctaatctcccttaccttcaagccatagtaaaggaggtgcttcgactacacccaccgggccca |
204 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
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| T |
34637985 |
tgttggccaaaacagtcatgtaagagactcagacattcctaatctcccttaccttcaagccatagtaaaggaggtgcttcgactgcacccaccgggccca |
34638084 |
T |
|
| Q |
205 |
ctattatcatgggcccgccttgcagtccatgacgttcatgtagataaaactcttgtgccagccggcacaacagcaatggtaaacatgtgggctatatctc |
304 |
Q |
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| T |
34638085 |
ctattatcatgggcccgccttgcagtccatgacgttcatgtagataaaacccttgtgccagctggcacaacagcaatggtaaacatgtgggctatatctc |
34638184 |
T |
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| Q |
305 |
atgactcctctatttgggaagatccattgacttttaagcccgagcgatttctaaaagaagatgtttct |
372 |
Q |
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|||| |||||||||||||||||||||||||||||||| || || |||||||||||||||||||||||| |
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| T |
34638185 |
atgattcctctatttgggaagatccattgacttttaatccagaacgatttctaaaagaagatgtttct |
34638252 |
T |
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