View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11241_low_5 (Length: 434)
Name: NF11241_low_5
Description: NF11241
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11241_low_5 |
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Alignment Details
Target: chr8 (Bit Score: 389; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 389; E-Value: 0
Query Start/End: Original strand, 14 - 410
Target Start/End: Complemental strand, 36570853 - 36570457
Alignment:
| Q |
14 |
atgaagaaatgttatcataccatagtgaaaggcttgcaattgcatttggattgcttagcactgtggaaggaagtacaataactataatgaaaaatctacg |
113 |
Q |
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| T |
36570853 |
atgaagaaatgttatcataccatagtgaaaggcttgcaattgcatttggattgcttagcactgtggaaggaagtacaataactataatgaaaaatctacg |
36570754 |
T |
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| Q |
114 |
tgtatgtggggattgtcacactgcaataacacttatggcaaagattgttaacagagagattgttgtcagagattctagccgttttcatcactttaagaat |
213 |
Q |
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| T |
36570753 |
tgtatgtggggattgtcatactgcaataacgcttatggcaaagattgttaacagagagattgttgtcagagattctagccgttttcatcactttaagaat |
36570654 |
T |
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| Q |
214 |
ggcatatgttcctgtggggattattggtagtagaacattgtttatttataaatttgttcattagaaagtttaaaatagtttacactgaaaatactgagga |
313 |
Q |
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| T |
36570653 |
ggcatatgttcctgtggggattattggtagtagaacattgtttatttataaatttgttcattagaaagtttaaaatagtttacactgaaaatactgagga |
36570554 |
T |
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| Q |
314 |
aggaaaaagatatgaatatcagtggaaatttttgtttattatacactgcagatccttgataacaaaggatggagtgaaaagtttggtatgacactgt |
410 |
Q |
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| T |
36570553 |
aggaaaaagatatgaatatcagtggaaatttttgtttattatacactgcagatccttgataacaaaggatggagtgaaaagtttggtatgacactgt |
36570457 |
T |
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