View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11242_low_3 (Length: 764)

Name: NF11242_low_3
Description: NF11242
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11242_low_3
NF11242_low_3
[»] chr8 (57 HSPs)
chr8 (46-718)||(42636356-42637031)
chr8 (569-704)||(28207591-28207726)
chr8 (570-712)||(2258087-2258229)
chr8 (564-722)||(27801212-27801370)
chr8 (598-750)||(36355907-36356062)
chr8 (571-712)||(12829867-12830007)
chr8 (570-720)||(33013014-33013163)
chr8 (597-717)||(4384127-4384246)
chr8 (569-705)||(24695715-24695849)
chr8 (590-703)||(37813410-37813521)
chr8 (603-718)||(1135162-1135277)
chr8 (564-717)||(3145999-3146155)
chr8 (599-717)||(9735295-9735413)
chr8 (572-695)||(167857-167978)
chr8 (570-678)||(16723225-16723333)
chr8 (570-712)||(12684490-12684631)
chr8 (597-717)||(884411-884531)
chr8 (616-712)||(35901945-35902041)
chr8 (570-721)||(24733140-24733290)
chr8 (573-711)||(1876480-1876617)
chr8 (570-690)||(39691132-39691252)
chr8 (602-717)||(1369850-1369965)
chr8 (598-717)||(12954724-12954843)
chr8 (611-717)||(37427197-37427306)
chr8 (569-674)||(20279589-20279694)
chr8 (569-674)||(21066216-21066321)
chr8 (596-705)||(33949553-33949662)
chr8 (599-685)||(17081394-17081480)
chr8 (568-689)||(31264963-31265084)
chr8 (567-684)||(37564356-37564473)
chr8 (570-702)||(45197342-45197477)
chr8 (622-694)||(3520822-3520894)
chr8 (569-653)||(7574234-7574318)
chr8 (575-675)||(13028103-13028202)
chr8 (570-674)||(27734374-27734478)
chr8 (603-695)||(2888729-2888825)
chr8 (566-677)||(9024452-9024563)
chr8 (604-670)||(2250356-2250422)
chr8 (569-606)||(18808868-18808905)
chr8 (570-619)||(37426387-37426436)
chr8 (572-616)||(9124087-9124131)
chr8 (604-656)||(12544982-12545034)
chr8 (635-703)||(33067535-33067603)
chr8 (572-610)||(7513393-7513431)
chr8 (572-610)||(28460090-28460128)
chr8 (583-721)||(41105986-41106123)
chr8 (622-703)||(2072385-2072465)
chr8 (623-711)||(43419730-43419817)
chr8 (622-685)||(5588980-5589043)
chr8 (568-607)||(7262123-7262162)
chr8 (572-674)||(25382592-25382695)
chr8 (576-607)||(31265101-31265132)
chr8 (569-616)||(39093051-39093098)
chr8 (575-641)||(8674432-8674498)
chr8 (569-638)||(24869381-24869450)
chr8 (571-644)||(31844282-31844354)
chr8 (576-609)||(42636336-42636369)
[»] chr7 (48 HSPs)
chr7 (565-721)||(27123237-27123393)
chr7 (564-717)||(28770439-28770592)
chr7 (568-721)||(44537307-44537460)
chr7 (569-721)||(35496560-35496712)
chr7 (569-721)||(28663126-28663276)
chr7 (570-720)||(43234758-43234908)
chr7 (572-722)||(21727392-21727542)
chr7 (573-721)||(43224074-43224221)
chr7 (595-717)||(39320973-39321095)
chr7 (595-720)||(35731280-35731405)
chr7 (571-703)||(40753952-40754083)
chr7 (568-695)||(27337665-27337790)
chr7 (569-721)||(14651377-14651523)
chr7 (569-705)||(25886137-25886273)
chr7 (570-717)||(7653554-7653691)
chr7 (597-705)||(37158359-37158467)
chr7 (565-656)||(27870391-27870480)
chr7 (612-721)||(3692887-3692997)
chr7 (572-721)||(10031909-10032057)
chr7 (572-689)||(42935978-42936093)
chr7 (573-681)||(44592837-44592945)
chr7 (589-675)||(22618730-22618816)
chr7 (570-702)||(34681661-34681791)
chr7 (574-666)||(46726109-46726200)
chr7 (597-717)||(9718985-9719101)
chr7 (572-718)||(31902740-31902884)
chr7 (569-711)||(34299741-34299882)
chr7 (570-703)||(36973304-36973438)
chr7 (658-712)||(48488174-48488228)
chr7 (597-666)||(33887894-33887963)
chr7 (573-684)||(18801012-18801122)
chr7 (570-701)||(18926296-18926425)
chr7 (614-705)||(26239544-26239635)
chr7 (614-712)||(32051330-32051426)
chr7 (597-656)||(32699804-32699862)
chr7 (626-717)||(34117862-34117953)
chr7 (569-675)||(1360504-1360609)
chr7 (574-703)||(35567088-35567215)
chr7 (569-610)||(27766784-27766825)
chr7 (626-694)||(47778569-47778636)
chr7 (626-717)||(10200593-10200683)
chr7 (570-616)||(17157862-17157908)
chr7 (569-639)||(17302858-17302928)
chr7 (570-616)||(32829094-32829140)
chr7 (571-689)||(35599821-35599939)
chr7 (570-644)||(44719460-44719534)
chr7 (576-609)||(27123377-27123410)
chr7 (576-609)||(44537444-44537477)
[»] chr4 (60 HSPs)
chr4 (569-721)||(8297838-8297990)
chr4 (565-705)||(7444388-7444529)
chr4 (597-721)||(7852531-7852655)
chr4 (565-705)||(51834877-51835017)
chr4 (572-703)||(27953046-27953176)
chr4 (569-712)||(35777695-35777838)
chr4 (570-721)||(45900136-45900287)
chr4 (576-717)||(37440800-37440941)
chr4 (569-689)||(49400580-49400699)
chr4 (575-721)||(50341854-50341998)
chr4 (571-721)||(24175386-24175535)
chr4 (568-718)||(41462015-41462165)
chr4 (572-705)||(31690353-31690485)
chr4 (598-712)||(47995733-47995847)
chr4 (596-700)||(49084408-49084513)
chr4 (602-719)||(50426989-50427106)
chr4 (597-705)||(25115267-25115374)
chr4 (635-722)||(8261141-8261228)
chr4 (635-722)||(8274558-8274645)
chr4 (572-711)||(53014203-53014341)
chr4 (569-703)||(20394605-20394737)
chr4 (605-712)||(31429280-31429387)
chr4 (572-717)||(37060522-37060664)
chr4 (572-695)||(39195740-39195862)
chr4 (595-712)||(31174647-31174764)
chr4 (597-717)||(24229637-24229757)
chr4 (568-719)||(41370158-41370308)
chr4 (568-673)||(23016257-23016362)
chr4 (569-693)||(37138177-37138300)
chr4 (575-705)||(34391710-34391838)
chr4 (568-689)||(49532270-49532390)
chr4 (597-697)||(37383766-37383865)
chr4 (628-712)||(42222982-42223065)
chr4 (635-694)||(36702817-36702876)
chr4 (597-681)||(51736349-51736433)
chr4 (570-689)||(2063444-2063562)
chr4 (597-717)||(13585252-13585368)
chr4 (572-675)||(53737827-53737930)
chr4 (670-712)||(23605663-23605705)
chr4 (571-721)||(50086396-50086544)
chr4 (570-675)||(31072503-31072608)
chr4 (636-700)||(14031347-14031411)
chr4 (573-640)||(8260173-8260240)
chr4 (573-640)||(8273591-8273658)
chr4 (572-638)||(21240639-21240705)
chr4 (570-644)||(30978712-30978786)
chr4 (575-653)||(54552801-54552879)
chr4 (597-694)||(12618709-12618805)
chr4 (609-694)||(48315931-48316015)
chr4 (571-653)||(13800751-13800831)
chr4 (670-717)||(24396254-24396301)
chr4 (598-712)||(48337552-48337667)
chr4 (576-607)||(50086379-50086410)
chr4 (575-638)||(53261531-53261594)
chr4 (570-616)||(20389993-20390039)
chr4 (570-608)||(38945120-38945158)
chr4 (573-671)||(39274933-39275030)
chr4 (569-606)||(6316908-6316945)
chr4 (570-607)||(44646626-44646663)
chr4 (563-604)||(50115016-50115057)
[»] chr5 (41 HSPs)
chr5 (571-721)||(30501127-30501277)
chr5 (571-721)||(30541470-30541620)
chr5 (569-718)||(30104771-30104920)
chr5 (570-717)||(16667283-16667430)
chr5 (564-717)||(7719166-7719319)
chr5 (569-717)||(18229593-18229740)
chr5 (569-720)||(2918584-2918736)
chr5 (568-712)||(9276576-9276719)
chr5 (569-712)||(17692231-17692372)
chr5 (572-705)||(15720037-15720170)
chr5 (597-720)||(34899124-34899247)
chr5 (572-717)||(112477-112622)
chr5 (575-712)||(8221096-8221232)
chr5 (569-689)||(41583510-41583630)
chr5 (569-703)||(39558772-39558905)
chr5 (600-705)||(3140812-3140917)
chr5 (658-721)||(7968446-7968509)
chr5 (597-695)||(40530448-40530546)
chr5 (569-712)||(41047953-41048096)
chr5 (570-702)||(8208147-8208279)
chr5 (570-705)||(13479987-13480122)
chr5 (572-703)||(23117232-23117362)
chr5 (571-649)||(17098245-17098323)
chr5 (602-703)||(18963812-18963914)
chr5 (572-702)||(24041030-24041158)
chr5 (568-689)||(25437893-25438015)
chr5 (570-616)||(31672379-31672425)
chr5 (569-610)||(23023600-23023641)
chr5 (569-649)||(25415923-25416003)
chr5 (569-656)||(34032142-34032229)
chr5 (572-638)||(779056-779122)
chr5 (580-666)||(2827606-2827692)
chr5 (577-675)||(16161394-16161492)
chr5 (571-656)||(2816147-2816232)
chr5 (597-722)||(5815057-5815182)
chr5 (570-606)||(10410418-10410454)
chr5 (572-607)||(3263717-3263752)
chr5 (668-721)||(5758628-5758680)
chr5 (573-610)||(9330409-9330446)
chr5 (635-712)||(14043414-14043491)
chr5 (567-616)||(28793300-28793349)
[»] chr1 (54 HSPs)
chr1 (570-720)||(39150550-39150700)
chr1 (569-718)||(2864110-2864258)
chr1 (575-705)||(43397018-43397150)
chr1 (586-690)||(38491205-38491309)
chr1 (568-703)||(48022358-48022493)
chr1 (570-680)||(34232735-34232845)
chr1 (564-718)||(39156223-39156381)
chr1 (597-705)||(47187824-47187932)
chr1 (602-717)||(44829272-44829386)
chr1 (570-714)||(39914602-39914743)
chr1 (598-719)||(38748710-38748831)
chr1 (567-712)||(4851241-4851385)
chr1 (569-705)||(32562357-32562491)
chr1 (570-722)||(48947172-48947323)
chr1 (568-705)||(40460726-40460863)
chr1 (569-705)||(2994975-2995109)
chr1 (595-702)||(8365496-8365603)
chr1 (636-718)||(31889196-31889279)
chr1 (573-712)||(8794388-8794528)
chr1 (572-717)||(45640517-45640661)
chr1 (596-712)||(17552827-17552943)
chr1 (577-718)||(3982240-3982380)
chr1 (568-661)||(34861259-34861352)
chr1 (573-705)||(34409705-34409836)
chr1 (597-717)||(42791133-42791253)
chr1 (570-644)||(40570657-40570732)
chr1 (564-666)||(3047829-3047931)
chr1 (573-719)||(14746189-14746334)
chr1 (572-705)||(7212745-7212871)
chr1 (616-705)||(44329610-44329699)
chr1 (600-695)||(604444-604537)
chr1 (561-652)||(8043841-8043930)
chr1 (569-644)||(39912274-39912349)
chr1 (569-702)||(16113886-16114020)
chr1 (570-682)||(26811258-26811369)
chr1 (569-712)||(30822772-30822913)
chr1 (595-654)||(8372988-8373047)
chr1 (567-638)||(31807850-31807921)
chr1 (635-705)||(36563737-36563805)
chr1 (622-717)||(44329484-44329579)
chr1 (567-617)||(4771987-4772037)
chr1 (631-705)||(6883131-6883205)
chr1 (588-721)||(6982979-6983110)
chr1 (571-615)||(18114527-18114571)
chr1 (570-666)||(34445637-34445733)
chr1 (572-644)||(37705847-37705919)
chr1 (573-705)||(39973863-39973994)
chr1 (623-702)||(5423753-5423831)
chr1 (569-616)||(45584506-45584553)
chr1 (568-610)||(3506946-3506988)
chr1 (613-687)||(18432974-18433048)
chr1 (632-702)||(22177254-22177324)
chr1 (570-676)||(31042969-31043075)
chr1 (568-638)||(35259116-35259186)
[»] chr2 (39 HSPs)
chr2 (569-718)||(1334874-1335023)
chr2 (568-712)||(19890185-19890329)
chr2 (571-719)||(4762318-4762466)
chr2 (570-718)||(34904778-34904926)
chr2 (592-720)||(9448942-9449069)
chr2 (598-721)||(31017295-31017418)
chr2 (594-714)||(31452341-31452460)
chr2 (568-714)||(20064877-20065022)
chr2 (572-694)||(11944888-11945009)
chr2 (597-705)||(15505539-15505647)
chr2 (575-681)||(14295602-14295707)
chr2 (594-720)||(19514863-19514989)
chr2 (570-702)||(13538363-13538495)
chr2 (600-703)||(37993076-37993179)
chr2 (569-700)||(38533877-38534006)
chr2 (569-666)||(25622501-25622597)
chr2 (622-717)||(29239240-29239334)
chr2 (567-690)||(32859750-32859873)
chr2 (569-700)||(38533354-38533483)
chr2 (572-694)||(7673164-7673286)
chr2 (572-666)||(20128300-20128394)
chr2 (600-726)||(22440126-22440251)
chr2 (570-695)||(1298976-1299101)
chr2 (613-718)||(41933142-41933247)
chr2 (568-684)||(3882582-3882698)
chr2 (572-648)||(21431049-21431124)
chr2 (593-711)||(5524452-5524570)
chr2 (564-653)||(24762769-24762858)
chr2 (596-684)||(8964386-8964474)
chr2 (564-675)||(24765297-24765408)
chr2 (569-610)||(15816802-15816843)
chr2 (570-610)||(2769344-2769383)
chr2 (608-676)||(34233954-34234022)
chr2 (569-675)||(2825989-2826095)
chr2 (560-606)||(8773775-8773821)
chr2 (602-695)||(814996-815088)
chr2 (568-616)||(12075614-12075660)
chr2 (571-616)||(20683089-20683134)
chr2 (594-675)||(44195499-44195580)
[»] scaffold0036 (1 HSPs)
scaffold0036 (570-721)||(62512-62663)
[»] chr6 (31 HSPs)
chr6 (590-703)||(1840971-1841084)
chr6 (565-712)||(19293449-19293596)
chr6 (572-717)||(17215674-17215819)
chr6 (569-689)||(2692449-2692568)
chr6 (571-705)||(3766249-3766380)
chr6 (573-721)||(34231943-34232090)
chr6 (626-712)||(31855078-31855164)
chr6 (605-717)||(7421675-7421787)
chr6 (622-718)||(32823697-32823793)
chr6 (597-720)||(1479081-1479203)
chr6 (569-684)||(35229259-35229374)
chr6 (597-695)||(26669292-26669390)
chr6 (577-693)||(28874374-28874490)
chr6 (597-718)||(27778749-27778869)
chr6 (575-717)||(30739572-30739714)
chr6 (569-703)||(2864845-2864978)
chr6 (569-705)||(5446665-5446801)
chr6 (573-720)||(9762774-9762921)
chr6 (573-717)||(23399081-23399225)
chr6 (564-627)||(31854756-31854819)
chr6 (646-712)||(30801785-30801851)
chr6 (643-703)||(2884128-2884191)
chr6 (569-638)||(13445801-13445870)
chr6 (613-705)||(1371168-1371259)
chr6 (613-705)||(1378916-1379007)
chr6 (597-661)||(11720925-11720989)
chr6 (614-706)||(24103780-24103872)
chr6 (626-721)||(12132551-12132645)
chr6 (569-695)||(15588622-15588747)
chr6 (570-607)||(3766388-3766424)
chr6 (565-666)||(30509279-30509380)
[»] chr3 (36 HSPs)
chr3 (570-701)||(42846012-42846145)
chr3 (575-712)||(29083895-29084033)
chr3 (572-705)||(48180174-48180307)
chr3 (595-719)||(26900012-26900138)
chr3 (569-694)||(52638173-52638296)
chr3 (596-694)||(49362368-49362466)
chr3 (602-722)||(51351277-51351397)
chr3 (575-717)||(12086754-12086895)
chr3 (597-705)||(16662970-16663079)
chr3 (600-694)||(24791495-24791588)
chr3 (622-685)||(26143090-26143153)
chr3 (569-695)||(45529133-45529258)
chr3 (614-711)||(40673446-40673543)
chr3 (626-695)||(42939856-42939925)
chr3 (593-705)||(39551859-39551970)
chr3 (614-712)||(11132558-11132659)
chr3 (568-606)||(17517519-17517557)
chr3 (569-638)||(3027055-3027124)
chr3 (573-705)||(24313522-24313654)
chr3 (567-695)||(4305156-4305283)
chr3 (572-616)||(52308986-52309030)
chr3 (569-689)||(53040436-53040556)
chr3 (569-689)||(54290796-54290916)
chr3 (567-638)||(29611985-29612056)
chr3 (626-720)||(41309839-41309936)
chr3 (569-656)||(46093603-46093690)
chr3 (597-712)||(47638890-47639005)
chr3 (569-607)||(28434478-28434516)
chr3 (569-705)||(48811372-48811507)
chr3 (622-685)||(22730509-22730572)
chr3 (668-703)||(26143164-26143199)
chr3 (569-616)||(29099142-29099189)
chr3 (569-620)||(40425082-40425133)
chr3 (569-607)||(34758896-34758934)
chr3 (573-639)||(38723212-38723277)
chr3 (569-690)||(45757896-45758017)
[»] scaffold0119 (1 HSPs)
scaffold0119 (597-695)||(1403-1501)
[»] scaffold0419 (1 HSPs)
scaffold0419 (577-693)||(1040-1156)
[»] scaffold0268 (1 HSPs)
scaffold0268 (626-717)||(20240-20330)
[»] scaffold1444 (2 HSPs)
scaffold1444 (569-690)||(950-1071)
scaffold1444 (626-689)||(1723-1786)
[»] scaffold0003 (1 HSPs)
scaffold0003 (595-690)||(103667-103762)
[»] scaffold0004 (1 HSPs)
scaffold0004 (606-690)||(335866-335950)
[»] scaffold0010 (1 HSPs)
scaffold0010 (568-644)||(26668-26743)
[»] scaffold0204 (1 HSPs)
scaffold0204 (598-712)||(25074-25189)
[»] scaffold0111 (1 HSPs)
scaffold0111 (573-627)||(37949-38004)


Alignment Details
Target: chr8 (Bit Score: 495; Significance: 0; HSPs: 57)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 495; E-Value: 0
Query Start/End: Original strand, 46 - 718
Target Start/End: Complemental strand, 42637031 - 42636356
Alignment:
Q  46 tgttaactatagggatatctcatatcaataacttcattcaaaaaagttgctnnnnnnnnnnnnnnntttcatccaaaaaatgatttttagaaggttgtaa 145  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||                |||||||||||||||||||||||||||||||||    
T  42637031 tgttaactatagggatatctcatatcaataacttcatccaaaaaagttgctcaaaaaaaaaaaaaacttcatccaaaaaatgatttttagaaggttgtaa 42636932  T
Q  146 aatgtaattattgagtcgtattgagttgaagtaccgcttctattctctgatgatatattttatttacnnnnnnncaaagaatagagagacaagaaccata 245  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||| |||||||||| ||||||||    
T  42636931 aatgtaattgttgagtcgtattgagttgaagtaccgcttctattctctgatgatatattttatttacaaaaaaacaaagattagagagacaggaaccata 42636832  T
Q  246 cta---tataattataaattattgttagatggtgcattttgagaggtgtttttgaaatggaattctgtagtaggtccaaatgttcaatacaggggaatac 342  Q
    |||   ||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| || |    
T  42636831 ctactatataattataaattattgttagatggtgcattttgagcggtgtttttgaaatagaattctgtagtaggtccaaatgttcaatacagggggatgc 42636732  T
Q  343 tggtgatcctcttaatatggagggtactttttgcacaaaaaacagaacggggtggtgttaaatgtaatctacttactattcttcagtgagatttgtacat 442  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| ||||||    
T  42636731 tggtgatcctcttaatatggagggtactttttgcacaaaaaacagaacggggtggtgttaaatgtaatccacttactattcgtcagtgagattagtacat 42636632  T
Q  443 tgctttgcggcccattgacatcaaataaatgcatatctcttttcccaccctacaaacccctttttcaccctctgtatttgcaattctatccgtttagatt 542  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  42636631 tgctttgcggcccattgacatcaaataaatgcatatctcttttcccaccctacaaacctctttttcaccctctgtatttgcaattctatccgtttagatt 42636532  T
Q  543 atnnnnnnncacacctcaaattttatagggtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtc 642  Q
    ||       ||||| || ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||    
T  42636531 ataaaaaaacacacttcgaattttatagggtcttgttaaggagtgctcccggggcactctttaagcatcccaaatttagtaattattattcaaaaaagtc 42636432  T
Q  643 aactattacaatttacaatgcatttaatacacaacttttcattaaaaacttaccatttaaagtacttaaatagtgc 718  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||    
T  42636431 aactattacaatttacaatgcatttaatacacaacttttcattaaaaacttaccatttaaagtgcttaaagagtgc 42636356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 569 - 704
Target Start/End: Original strand, 28207591 - 28207726
Alignment:
Q  569 agggtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcattta 668  Q
    |||||||||||||||||||| |||| | ||||||||||||||||||||||||  ||| ||| ||| |||||||||||||||||||||| ||||||||| |    
T  28207591 agggtcttgttaacgagtgcccccgagacactctttaagcatcccaaatttaacaataattcttttaaaaagtcaactattacaatttccaatgcattca 28207690  T
Q  669 atacacaacttttcattaaaaacttaccatttaaag 704  Q
    ||||||||||||||||||||||||| ||||||||||    
T  28207691 atacacaacttttcattaaaaactttccatttaaag 28207726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 570 - 712
Target Start/End: Complemental strand, 2258229 - 2258087
Alignment:
Q  570 gggtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaa 669  Q
    |||||||||||||||||  ||||| |||||||||||||||||||||||||| |||||||| ||| ||||||| ||  ||||||||||  |||| ||||||    
T  2258229 gggtcttgttaacgagttttcccgtggcactctttaagcatcccaaatttaataattattcttttaaaaagttaatcattacaatttttaatgtatttaa 2258130  T
Q  670 tacacaacttttcattaaaaacttaccatttaaagtacttaaa 712  Q
    |||||||||||||||| ||||||||||||||||||| ||||||    
T  2258129 tacacaacttttcatttaaaacttaccatttaaagtgcttaaa 2258087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 564 - 722
Target Start/End: Complemental strand, 27801370 - 27801212
Alignment:
Q  564 tttatagggtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgc 663  Q
    ||||| ||||||||||||||||||| |||  | |||||||||| ||| | ||||||| |||||||| ||| |||||||||||||||||||||| ||||||    
T  27801370 tttattgggtcttgttaacgagtgcccccatgacactctttaatcattctaaatttagtaattattcttttaaaaagtcaactattacaattttcaatgc 27801271  T
Q  664 atttaatacacaacttttcattaaaaacttaccatttaaagtacttaaatagtgcccca 722  Q
    ||| | |||||||||||| ||||||||||||| ||||||||| |||||| ||| |||||    
T  27801270 attcattacacaactttttattaaaaacttactatttaaagtgcttaaagagtacccca 27801212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 598 - 750
Target Start/End: Complemental strand, 36356062 - 36355907
Alignment:
Q  598 actctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaatacacaacttttcattaaaaacttacca 697  Q
    |||||||||| |||||||||| | |||||||| ||| |||||     ||||| ||||||  |||||||||||||||||||||||||||||||||||||||    
T  36356062 actctttaagaatcccaaattaagtaattattcttttaaaaa-----ctattgcaatttctaatgcatttaatacacaacttttcattaaaaacttacca 36355968  T
Q  698 tttaaagtacttaaatagtgccccaca--------ttaacattatggttgctgtaataact 750  Q
    |||||||||||||||||||| ||||||        ||||||||||||||||||||||||||    
T  36355967 tttaaagtacttaaatagtgtcccacatgcactcgttaacattatggttgctgtaataact 36355907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 571 - 712
Target Start/End: Complemental strand, 12830007 - 12829867
Alignment:
Q  571 ggtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaat 670  Q
    |||||||||||||| |||| ||||  |||| ||||||||||  ||||||| |||||||||||| |||||||| | |||||||||| |||||||||| |||    
T  12830007 ggtcttgttaacgaatgctgccgga-cactttttaagcatctaaaatttaataattattattttaaaaagtctattattacaattaacaatgcattcaat 12829909  T
Q  671 acacaacttttcattaaaaacttaccatttaaagtacttaaa 712  Q
    | | || |||||||||||||||||||||||||||| ||||||    
T  12829908 atataatttttcattaaaaacttaccatttaaagtgcttaaa 12829867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 570 - 720
Target Start/End: Original strand, 33013014 - 33013163
Alignment:
Q  570 gggtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaa 669  Q
    |||||||||||||||||| |  || || ||||||||||||| |||||||||  ||||||| ||| |||||||||||||||||||||| ||||| | | ||    
T  33013014 gggtcttgttaacgagtgttttcgagg-actctttaagcataccaaatttaacaattattcttttaaaaagtcaactattacaatttccaatgtactcaa 33013112  T
Q  670 tacacaacttttcattaaaaacttaccatttaaagtacttaaatagtgccc 720  Q
    ||||||||||||||| || ||||||| | ||||||| |||||| |||||||    
T  33013113 tacacaacttttcataaagaacttactaattaaagtgcttaaagagtgccc 33013163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 597 - 717
Target Start/End: Complemental strand, 4384246 - 4384127
Alignment:
Q  597 cactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaatacacaacttttcattaaaaacttacc 696  Q
    ||||||||||||| || ||||||| |||||||| ||| ||||| |||||||||||||||| ||||||||| |||||||||| |||||||||||| ||| |    
T  4384246 cactctttaagcaccctaaatttagtaattattcttttaaaaaatcaactattacaatttccaatgcattcaatacacaac-tttcattaaaaatttatc 4384148  T
Q  697 atttaaagtacttaaatagtg 717  Q
    ||||||||| |||||| ||||    
T  4384147 atttaaagtgcttaaagagtg 4384127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 569 - 705
Target Start/End: Original strand, 24695715 - 24695849
Alignment:
Q  569 agggtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcattta 668  Q
    |||||||||||||| |||| | ||||| ||||||||||| ||||  |||||| |||||||||||| ||||||||||||||||||||||  |||||| | |    
T  24695715 agggtcttgttaacaagtg-taccgggacactctttaagaatccagaatttagtaattattattttaaaaagtcaactattacaatttctaatgcagtga 24695813  T
Q  669 atacacaacttttcattaaaaacttaccatttaaagt 705  Q
    ||||||||||||| ||| ||||||||| |||||||||    
T  24695814 atacacaactttttatt-aaaacttactatttaaagt 24695849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 590 - 703
Target Start/End: Complemental strand, 37813521 - 37813410
Alignment:
Q  590 cccggggcactctttaagcatcccaaatttactaattattattt-aaaaaagtcaactattacaatttacaatgcatttaatacacaacttttcattaaa 688  Q
    |||||||||||||||||| |||||||||||| |||||||| ||| |||||||||||| |||||||||| ||||||||| |||||||||||||||||   |    
T  37813521 cccggggcactctttaaggatcccaaatttagtaattattcttttaaaaaagtcaaccattacaatttccaatgcattgaatacacaacttttcat---a 37813425  T
Q  689 aacttaccatttaaa 703  Q
    ||||||| |||||||    
T  37813424 aacttactatttaaa 37813410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 603 - 718
Target Start/End: Original strand, 1135162 - 1135277
Alignment:
Q  603 ttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaatacacaacttttcattaaaaacttaccatttaa 702  Q
    ||||||||| | |||||| |||||||| ||| |||||||||||||||||||||| ||||| ||| |||| |||||||||| |||||||||||||||||||    
T  1135162 ttaagcatctcgaatttagtaattattcttttaaaaagtcaactattacaattttcaatgtattcaatatacaacttttccttaaaaacttaccatttaa 1135261  T
Q  703 agtacttaaatagtgc 718  Q
    |||  ||||| |||||    
T  1135262 agtgtttaaagagtgc 1135277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 564 - 717
Target Start/End: Original strand, 3145999 - 3146155
Alignment:
Q  564 tttatagggtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgc 663  Q
    |||| ||||||| |||||||||||| | |||| ||||||| |||||||||| ||||| |||||||| ||| ||||||| |||||||||||||| ||||||    
T  3145999 tttaaagggtctcgttaacgagtgccctcgggtcactctt-aagcatcccatatttagtaattattcttttaaaaagttaactattacaatttccaatgc 3146097  T
Q  664 attta----atacacaacttttcattaaaaacttaccatttaaagtacttaaatagtg 717  Q
    ||| |    || |||| | ||||||||||||||||| ||||||||| |||||| ||||    
T  3146098 attcattcaatgcacaccgtttcattaaaaacttactatttaaagtgcttaaagagtg 3146155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 599 - 717
Target Start/End: Complemental strand, 9735413 - 9735295
Alignment:
Q  599 ctctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaatacacaacttttcattaaaaacttaccat 698  Q
    |||||||| ||| | ||||||| |||||||| ||||||||||||||||||||  | || |||| |||||||||||||||||||||||||||| ||| |||    
T  9735413 ctctttaaacattctaaatttaataattattttttaaaaaagtcaactattatgactttcaatacatttaatacacaacttttcattaaaaatttatcat 9735314  T
Q  699 ttaaagtacttaaatagtg 717  Q
    ||||| || ||||| ||||    
T  9735313 ttaaaatatttaaaaagtg 9735295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 572 - 695
Target Start/End: Complemental strand, 167978 - 167857
Alignment:
Q  572 gtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaata 671  Q
    ||||||||| ||||||| ||||   ||||||||||| ||| ||||||||  ||||||| ||| |||||||||||||||| ||||| ||||||||||| ||    
T  167978 gtcttgttagcgagtgcccccga--cactctttaagtatctcaaatttaaaaattattcttttaaaaagtcaactattataatttccaatgcatttatta 167881  T
Q  672 cacaacttttcattaaaaacttac 695  Q
    || ||||||||||| |||||||||    
T  167880 cataacttttcatttaaaacttac 167857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 570 - 678
Target Start/End: Complemental strand, 16723333 - 16723225
Alignment:
Q  570 gggtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaa 669  Q
    ||||||||||||||||||  ||| ||||||||||||||||||||||||||  |||||||| ||| ||||| ||||||| |||||||| |||| |||| ||    
T  16723333 gggtcttgttaacgagtgaccccagggcactctttaagcatcccaaattttgtaattattcttttaaaaaatcaactaatacaattttcaatacattcaa 16723234  T
Q  670 tacacaact 678  Q
     ||||||||    
T  16723233 cacacaact 16723225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 570 - 712
Target Start/End: Complemental strand, 12684631 - 12684490
Alignment:
Q  570 gggtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaa 669  Q
    |||||| ||||||| |||||||||   |||||||||||||| ||||||||| |||||||| ||| ||| | ||||||||||||||||  |||||||| |     
T  12684631 gggtctcgttaacg-gtgctcccgaaacactctttaagcattccaaatttaataattattctttcaaagaatcaactattacaatttctaatgcattcat 12684533  T
Q  670 tacacaacttttcattaaaaacttaccatttaaagtacttaaa 712  Q
    |||| ||||||| |||||||| |||  ||||||||| ||||||    
T  12684532 tacaaaacttttaattaaaaatttattatttaaagtgcttaaa 12684490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 597 - 717
Target Start/End: Original strand, 884411 - 884531
Alignment:
Q  597 cactctttaagcatcccaaatttactaattattatt-taaaaaagtcaactattacaatttacaatgcatttaatacacaacttttcattaaaaacttac 695  Q
    |||||||||| ||||  ||||||| |||||||| || ||||||| |||| ||||||||||| ||||| ||||||||||||| |||||||||||||||| |    
T  884411 cactctttaaacatcataaatttagtaattattcttataaaaaaatcaattattacaattttcaatg-atttaatacacaatttttcattaaaaactttc 884509  T
Q  696 catttaaagtacttaaatagtg 717  Q
     ||||||||| |||||| ||||    
T  884510 aatttaaagtgcttaaagagtg 884531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 616 - 712
Target Start/End: Original strand, 35901945 - 35902041
Alignment:
Q  616 atttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaatacacaacttttcattaaaaacttaccatttaaagtacttaaa 712  Q
    ||||| |||||||| ||| |||||||||| ||||||||||| ||||||||| |||||| ||||||||||||||||||||  ||||||| | ||||||    
T  35901945 atttaataattatttttttaaaaagtcaattattacaatttccaatgcattcaatacagaacttttcattaaaaacttattatttaaaatgcttaaa 35902041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 570 - 721
Target Start/End: Original strand, 24733140 - 24733290
Alignment:
Q  570 gggtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaa 669  Q
    |||| |||||||||||||  ||||||  |||||||||| ||||||||||||  || |||| | |||||||||||| | |||||| ||||| |||||| |     
T  24733140 gggtgttgttaacgagtgtccccgggatactctttaaggatcccaaatttaaaaaatattctctaaaaaagtcaaatgttacaaattacagtgcattgat 24733239  T
Q  670 tacacaacttttcattaaaaacttaccatttaaagtacttaaatagtgcccc 721  Q
    ||||||| |||| | ||||||||||| ||| || ||||||||| ||||||||    
T  24733240 tacacaaattttta-taaaaacttactattaaaggtacttaaagagtgcccc 24733290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 573 - 711
Target Start/End: Complemental strand, 1876617 - 1876480
Alignment:
Q  573 tcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaatac 672  Q
    |||||||||||||||| ||||||||||||||||||||| | ||||| | |||||||| ||| |||| |||||   || |||||| ||||||| | | |||    
T  1876617 tcttgttaacgagtgcccccggggcactctttaagcatgctaaattaagtaattattcttttaaaatgtcaaaattttcaatttccaatgcactgattac 1876518  T
Q  673 acaacttttcattaaaaacttaccatttaaagtacttaa 711  Q
    ||||  ||||| |||||| |||||||||||||| |||||    
T  1876517 acaaactttca-taaaaaattaccatttaaagtccttaa 1876480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 570 - 690
Target Start/End: Complemental strand, 39691252 - 39691132
Alignment:
Q  570 gggtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaa 669  Q
    |||| |||||||||||||| | || | |||||||||||||| ||| ||| |  ||||||| |||||||||||||| || | |||||| ||||||||| ||    
T  39691252 gggttttgttaacgagtgccctcgagacactctttaagcattccacattaaaaaattattctttaaaaaagtcaaatagttcaattttcaatgcattgaa 39691153  T
Q  670 tacacaacttttcattaaaaa 690  Q
    ||||||| ||||||| |||||    
T  39691152 tacacaaattttcataaaaaa 39691132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 602 - 717
Target Start/End: Complemental strand, 1369965 - 1369850
Alignment:
Q  602 tttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaatacacaacttttcattaaaaacttaccattta 701  Q
    ||||||||||| |||||||  ||||||| ||| |||||||||||||| ||||||| ||||||||| |||| | ||||||||||  ||||||||  | |||    
T  1369965 tttaagcatcctaaatttagcaattattcttttaaaaagtcaactatcacaatttccaatgcattcaatagataacttttcatataaaacttattaatta 1369866  T
Q  702 aagtacttaaatagtg 717  Q
    |||| |||||| ||||    
T  1369865 aagtgcttaaagagtg 1369850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 598 - 717
Target Start/End: Original strand, 12954724 - 12954843
Alignment:
Q  598 actctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaatacacaacttttcattaaaaacttacca 697  Q
    ||||| ||| |||| |||||||| |||||||| |||  |||| |||||||||| ||||| ||||  ||||||||||||| |||||| |||||| ||| ||    
T  12954724 actctataaacatctcaaatttagtaattattttttttaaaaatcaactattataattttcaatagatttaatacacaatttttcaataaaaatttatca 12954823  T
Q  698 tttaaagtacttaaatagtg 717  Q
    |||||||||| |||| ||||    
T  12954824 tttaaagtacataaagagtg 12954843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 611 - 717
Target Start/End: Original strand, 37427197 - 37427306
Alignment:
Q  611 cccaaatttactaattattattt---aaaaaagtcaactattacaatttacaatgcatttaatacacaacttttcattaaaaacttaccatttaaagtac 707  Q
    |||||||||| |||||||| |||   |||||| |||| ||||||||||| ||||| | | ||||| |||||||||||||||| ||||||||||||||| |    
T  37427197 cccaaatttagtaattattcttttaaaaaaaaatcaattattacaattttcaatgtaatcaatactcaacttttcattaaaatcttaccatttaaagtgc 37427296  T
Q  708 ttaaatagtg 717  Q
    ||||| ||||    
T  37427297 ttaaagagtg 37427306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 569 - 674
Target Start/End: Complemental strand, 20279694 - 20279589
Alignment:
Q  569 agggtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcattta 668  Q
    |||||||||||||| ||||| ||||||||||||||||||||| | ||| | |  ||||||| ||| |||||||||| |||| |||||| |||| |||| |    
T  20279694 agggtcttgttaacaagtgcccccggggcactctttaagcattctaaaataagcaattattctttcaaaaagtcaaatatttcaattttcaatacattaa 20279595  T
Q  669 atacac 674  Q
    ||||||    
T  20279594 atacac 20279589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 569 - 674
Target Start/End: Complemental strand, 21066321 - 21066216
Alignment:
Q  569 agggtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcattta 668  Q
    |||||||||||||| ||||| ||||||||||||||||||||| | ||| | |  ||||||| ||| |||||||||| |||| |||||| |||| |||| |    
T  21066321 agggtcttgttaacaagtgcccccggggcactctttaagcattctaaaataagcaattattctttcaaaaagtcaaatatttcaattttcaatacattaa 21066222  T
Q  669 atacac 674  Q
    ||||||    
T  21066221 atacac 21066216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 596 - 705
Target Start/End: Complemental strand, 33949662 - 33949553
Alignment:
Q  596 gcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaatacacaacttttcattaaaaacttac 695  Q
    |||||||||||||||   ||||||| ||| |||| ||| ||||| ||||||||||||||||  |||||| | ||||||||||||||||| || |||||||    
T  33949662 gcactctttaagcatattaaatttagtaagtattgttttaaaaattcaactattacaatttcaaatgcactcaatacacaacttttcataaataacttac 33949563  T
Q  696 catttaaagt 705  Q
     | |||||||    
T  33949562 taattaaagt 33949553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 599 - 685
Target Start/End: Complemental strand, 17081480 - 17081394
Alignment:
Q  599 ctctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaatacacaacttttcatt 685  Q
    |||||| || ||| ||||||||  ||||||| ||||||||||||||||||||||||||  |||||| | ||| ||||||||||||||    
T  17081480 ctctttgaggatctcaaatttagcaattattttttaaaaaagtcaactattacaatttctaatgcaatgaatgcacaacttttcatt 17081394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 568 - 689
Target Start/End: Original strand, 31264963 - 31265084
Alignment:
Q  568 tagggtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcattt 667  Q
    ||||||||||||||||||||| || | |||||||||||||||| | |||||    | ||||| ||||||||||||||  | | |||||| ||||| |||     
T  31264963 tagggtcttgttaacgagtgcccctgtggcactctttaagcatgctaaattaggaagttattctttaaaaaagtcaaacaattcaatttccaatgtatta 31265062  T
Q  668 aatacacaacttttcattaaaa 689  Q
    ||||||||| ||||||| ||||    
T  31265063 aatacacaagttttcataaaaa 31265084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 567 - 684
Target Start/End: Complemental strand, 37564473 - 37564356
Alignment:
Q  567 atagggtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatt 666  Q
    |||| |||||||||||||||||  | ||| |||||||||| ||| | ||||| |  ||||||| |||||||||||||| || | |||||| ||||| |||    
T  37564473 atagagtcttgttaacgagtgcctctgggacactctttaaacatgctaaattaagaaattattctttaaaaaagtcaaatagttcaatttccaatgtatt 37564374  T
Q  667 taatacacaacttttcat 684  Q
     ||||||||| |||||||    
T  37564373 aaatacacaagttttcat 37564356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 570 - 702
Target Start/End: Original strand, 45197342 - 45197477
Alignment:
Q  570 gggtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatt---taaaaaagtcaactattacaatttacaatgcatt 666  Q
    |||| |||||||||||||||| || | |||||| |||| ||||| |||||| |||||| ||||   | ||||||||||| ||| |||||| ||||| |||    
T  45197342 gggtattgttaacgagtgctctcgagacactctctaaggatccccaatttagtaattactattcctttaaaaagtcaacaattgcaattttcaatggatt 45197441  T
Q  667 taatacacaacttttcattaaaaacttaccatttaa 702  Q
     | ||| ||||||||||| ||||| |||| ||||||    
T  45197442 gattacccaacttttcataaaaaatttactatttaa 45197477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 622 - 694
Target Start/End: Complemental strand, 3520894 - 3520822
Alignment:
Q  622 taattattatttaaaaaagtcaactattacaatttacaatgcatttaatacacaacttttcattaaaaactta 694  Q
    |||||||| ||| ||||| |||||||||||| |||  |||||||| |||||| ||||||||||||||||||||    
T  3520894 taattattcttttaaaaaatcaactattacagtttttaatgcattcaatacataacttttcattaaaaactta 3520822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 569 - 653
Target Start/End: Complemental strand, 7574318 - 7574234
Alignment:
Q  569 agggtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaa 653  Q
    |||||||||||||||||||||||||||||||| |||||| | ||||||||||  || ||||  |||||||| |||| | ||||||    
T  7574318 agggtcttgttaacgagtgctcccggggcactatttaaggaacccaaatttagaaaatatttcttaaaaaaatcaaatgttacaa 7574234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 575 - 675
Target Start/End: Original strand, 13028103 - 13028202
Alignment:
Q  575 ttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaatacac 674  Q
    |||||||||||||| |||| |||||||||||||||| | |||||||  ||||||| ||| ||||| || | ||||||||||| ||||||| | |||||||    
T  13028103 ttgttaacgagtgc-cccgaggcactctttaagcattctaaatttatcaattattcttttaaaaaatctattattacaattttcaatgcactcaatacac 13028201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 570 - 674
Target Start/End: Complemental strand, 27734478 - 27734374
Alignment:
Q  570 gggtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaa 669  Q
    |||| ||| |||||||||| |||||  ||||||||||| ||||||||||||  |||||||  || |||||||| | |||||||| || ||||||||| ||    
T  27734478 gggttttgctaacgagtgcccccggatcactctttaaggatcccaaatttagaaattattccttcaaaaagtctaatattacaaattccaatgcattgaa 27734379  T
Q  670 tacac 674  Q
    |||||    
T  27734378 tacac 27734374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 603 - 695
Target Start/End: Complemental strand, 2888825 - 2888729
Alignment:
Q  603 ttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcattta----atacacaacttttcattaaaaacttac 695  Q
    |||||||||||| ||||| |||||||| ||| ||||||| |||||||| ||||| ||||||||| |    || |||||| |||||||||||||||||    
T  2888825 ttaagcatcccatatttagtaattatttttttaaaaagttaactattataatttccaatgcattcattcaatgcacaacgtttcattaaaaacttac 2888729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 566 - 677
Target Start/End: Original strand, 9024452 - 9024563
Alignment:
Q  566 tatagggtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcat 665  Q
    |||| ||||||||||| ||||||  |||   ||||||||||| |  ||||||||| |||||||| ||| ||||| ||||||||||||||||   ||||||    
T  9024452 tatatggtcttgttaatgagtgcctccgaaacactctttaagaaaaccaaatttagtaattattctttcaaaaaatcaactattacaattttttatgcat 9024551  T
Q  666 ttaatacacaac 677  Q
    | ||||||||||    
T  9024552 taaatacacaac 9024563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 604 - 670
Target Start/End: Original strand, 2250356 - 2250422
Alignment:
Q  604 taagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaat 670  Q
    ||||||||||||||||| |||||||| ||| ||||||||||| |||| ||||| ||||| |||||||    
T  2250356 taagcatcccaaatttaataattattcttttaaaaagtcaaccattataattttcaatgtatttaat 2250422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 569 - 606
Target Start/End: Complemental strand, 18808905 - 18808868
Alignment:
Q  569 agggtcttgttaacgagtgctcccggggcactctttaa 606  Q
    ||||||||||||||||||||||||||||||||||||||    
T  18808905 agggtcttgttaacgagtgctcccggggcactctttaa 18808868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 570 - 619
Target Start/End: Original strand, 37426387 - 37426436
Alignment:
Q  570 gggtcttgttaacgagtgctcccggggcactctttaagcatcccaaattt 619  Q
    ||||||||||||||||||| || ||| |||||||||||||||||||||||    
T  37426387 gggtcttgttaacgagtgcccctgggacactctttaagcatcccaaattt 37426436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 572 - 616
Target Start/End: Complemental strand, 9124131 - 9124087
Alignment:
Q  572 gtcttgttaacgagtgctcccggggcactctttaagcatcccaaa 616  Q
    |||||||||||||||||| |||||||||||||||||||| |||||    
T  9124131 gtcttgttaacgagtgcttccggggcactctttaagcattccaaa 9124087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 604 - 656
Target Start/End: Original strand, 12544982 - 12545034
Alignment:
Q  604 taagcatcccaaatttactaattattatttaaaaaagtcaactattacaattt 656  Q
    ||||||||| ||||||| |||||||||||| |||||||||||||||| |||||    
T  12544982 taagcatcctaaatttagtaattattatttcaaaaagtcaactattataattt 12545034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 635 - 703
Target Start/End: Original strand, 33067535 - 33067603
Alignment:
Q  635 aaaaagtcaactattacaatttacaatgcatttaatacacaacttttcattaaaaacttaccatttaaa 703  Q
    |||||||||| ||||||||| |  |||||||| |||||| ||||||||||| ||||||||| |||||||    
T  33067535 aaaaagtcaattattacaatgtctaatgcattcaatacaaaacttttcatttaaaacttactatttaaa 33067603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 572 - 610
Target Start/End: Complemental strand, 7513431 - 7513393
Alignment:
Q  572 gtcttgttaacgagtgctcccggggcactctttaagcat 610  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  7513431 gtcttgttaacgagtgttcccggggcactctttaagcat 7513393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 572 - 610
Target Start/End: Complemental strand, 28460128 - 28460090
Alignment:
Q  572 gtcttgttaacgagtgctcccggggcactctttaagcat 610  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  28460128 gtcttgttaacgagtgatcccggggcactctttaagcat 28460090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 583 - 721
Target Start/End: Complemental strand, 41106123 - 41105986
Alignment:
Q  583 gagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaatacacaacttttc 682  Q
    |||||| || |||||||| ||| || || ||||||| |  ||||| |  ||||||||||||| || | |||||| ||||||||| ||| ||||| |||||    
T  41106123 gagtgcccctggggcactgtttgaggattccaaattaagaaattaatcattaaaaaagtcaaatagttcaattttcaatgcattgaattcacaatttttc 41106024  T
Q  683 attaaaaacttaccatttaaagtacttaaatagtgcccc 721  Q
      |||||||||||||||||| || |||||| ||| ||||    
T  41106023 -gtaaaaacttaccatttaaggtccttaaagagtacccc 41105986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 622 - 703
Target Start/End: Original strand, 2072385 - 2072465
Alignment:
Q  622 taattattatttaaaaaagtcaactattacaatttacaatgcatttaatacacaacttttcattaaaaacttaccatttaaa 703  Q
    |||||||| ||| ||||||||||| ||||||| ||  ||| ||||||||||| || ||||||| |||| |||||||||||||    
T  2072385 taattattcttttaaaaagtcaaccattacaacttctaatacatttaatacataa-ttttcataaaaatcttaccatttaaa 2072465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 623 - 711
Target Start/End: Complemental strand, 43419817 - 43419730
Alignment:
Q  623 aattattatttaaaaaagtcaactattacaatttacaatgcatttaatacacaacttttcattaaaaacttaccatttaaagtacttaa 711  Q
    ||||||| ||||||||||| || ||||  |||||  ||| |||||| || |||| ||||||| ||||||||| ||||||||||||||||    
T  43419817 aattattttttaaaaaagttaaatattttaatttgtaatacatttattatacaaattttcat-aaaaacttaacatttaaagtacttaa 43419730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 622 - 685
Target Start/End: Original strand, 5588980 - 5589043
Alignment:
Q  622 taattattatttaaaaaagtcaactattacaatttacaatgcatttaatacacaacttttcatt 685  Q
    |||||||| ||| |||||||||||||||| ||||| ||||||||| | |||| || ||||||||    
T  5588980 taattattcttttaaaaagtcaactattataattttcaatgcattaattacaaaaattttcatt 5589043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 568 - 607
Target Start/End: Complemental strand, 7262162 - 7262123
Alignment:
Q  568 tagggtcttgttaacgagtgctcccggggcactctttaag 607  Q
    ||||||||||||||||||||| ||| ||||||||||||||    
T  7262162 tagggtcttgttaacgagtgcccccagggcactctttaag 7262123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 572 - 674
Target Start/End: Original strand, 25382592 - 25382695
Alignment:
Q  572 gtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattattt-aaaaaagtcaactattacaatttacaatgcatttaat 670  Q
    ||||||||||||||||| ||||  ||| | ||||||||| ||||||| |  ||||||| ||| |||||||| || || | |||||| ||||||||| |||    
T  25382592 gtcttgttaacgagtgcccccgaagcattttttaagcattccaaattaagaaattattctttaaaaaaagtaaaatagtccaatttccaatgcattaaat 25382691  T
Q  671 acac 674  Q
    ||||    
T  25382692 acac 25382695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 576 - 607
Target Start/End: Complemental strand, 31265132 - 31265101
Alignment:
Q  576 tgttaacgagtgctcccggggcactctttaag 607  Q
    ||||||||||||||||||||||||||||||||    
T  31265132 tgttaacgagtgctcccggggcactctttaag 31265101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 569 - 616
Target Start/End: Original strand, 39093051 - 39093098
Alignment:
Q  569 agggtcttgttaacgagtgctcccggggcactctttaagcatcccaaa 616  Q
    |||||||||||||||||||  ||||||| ||||||||||||| |||||    
T  39093051 agggtcttgttaacgagtgtccccggggtactctttaagcataccaaa 39093098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 575 - 641
Target Start/End: Original strand, 8674432 - 8674498
Alignment:
Q  575 ttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagt 641  Q
    |||||||||||||| ||| | | |||||||||| ||||||||||||  || |||| |||||||||||    
T  8674432 ttgttaacgagtgcccccagagtactctttaaggatcccaaatttaaaaaatattttttaaaaaagt 8674498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 569 - 638
Target Start/End: Original strand, 24869381 - 24869450
Alignment:
Q  569 agggtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaa 638  Q
    |||||||||||||||||||| || | |||||||||||| ||| | ||||| | |||||||| | ||||||    
T  24869381 agggtcttgttaacgagtgcccctgtggcactctttaaacatgctaaattaagtaattattctctaaaaa 24869450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 571 - 644
Target Start/End: Complemental strand, 31844354 - 31844282
Alignment:
Q  571 ggtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaa 644  Q
    |||||||||||||||||| ||| |||||||||||||  || | ||||| | ||||||||  |||||||||||||    
T  31844354 ggtcttgttaacgagtgc-cccagggcactctttaaatattctaaattaagtaattattccttaaaaaagtcaa 31844282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 576 - 609
Target Start/End: Original strand, 42636336 - 42636369
Alignment:
Q  576 tgttaacgagtgctcccggggcactctttaagca 609  Q
    ||||||||||||||||||| ||||||||||||||    
T  42636336 tgttaacgagtgctcccggagcactctttaagca 42636369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 109; Significance: 2e-54; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 565 - 721
Target Start/End: Original strand, 27123237 - 27123393
Alignment:
Q  565 ttatagggtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgca 664  Q
    |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||| |||| ||| ||| |||||||||||||||||||||| |||||||    
T  27123237 ttattgggtcttgttaacgagtgcccccggggcactctttaagcatcccaaatttagtaatcattcttttaaaaagtcaactattacaatttccaatgca 27123336  T
Q  665 tttaatacacaacttttcattaaaaacttaccatttaaagtacttaaatagtgcccc 721  Q
    || | ||||||||||||| |||||||||||||||||||||| |||||| ||||||||    
T  27123337 ttaagtacacaacttttcgttaaaaacttaccatttaaagtgcttaaagagtgcccc 27123393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 564 - 717
Target Start/End: Original strand, 28770439 - 28770592
Alignment:
Q  564 tttatagggtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgc 663  Q
    ||||| |||||||||||||||||||  |||||||||||||||||||||||||| ||| |||||||| |||  ||||||||||||||||||||| ||||||    
T  28770439 tttattgggtcttgttaacgagtgcctccggggcactctttaagcatcccaaaattagtaattattcttttgaaaagtcaactattacaatttccaatgc 28770538  T
Q  664 atttaatacacaacttttcattaaaaacttaccatttaaagtacttaaatagtg 717  Q
    ||| |||||||||||||||||||||||||||| ||||| ||| |||||| ||||    
T  28770539 attcaatacacaacttttcattaaaaacttactatttagagtgcttaaagagtg 28770592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 568 - 721
Target Start/End: Original strand, 44537307 - 44537460
Alignment:
Q  568 tagggtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcattt 667  Q
    |||||||| |||||||||||| || |  ||||||||||||||||||| ||||| |||||||| ||| |||||||||||||||| ||||| || || || |    
T  44537307 tagggtctcgttaacgagtgcccctgatgcactctttaagcatcccatatttagtaattattcttttaaaaagtcaactattataatttccattgtatat 44537406  T
Q  668 aatacacaacttttcattaaaaacttaccatttaaagtacttaaatagtgcccc 721  Q
    |||||| ||||||||||||||||||||| ||||||||| |||||| ||||||||    
T  44537407 aatacataacttttcattaaaaacttactatttaaagtgcttaaagagtgcccc 44537460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 569 - 721
Target Start/End: Complemental strand, 35496712 - 35496560
Alignment:
Q  569 agggtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcattta 668  Q
    ||||||||||| |||| ||  ||||| ||||||||||||||||| ||||||| ||| |||  ||| |||||||||||||||||||||| ||||||||| |    
T  35496712 agggtcttgtttacgaatgtccccggagcactctttaagcatccaaaatttagtaactatatttttaaaaagtcaactattacaattttcaatgcattca 35496613  T
Q  669 atacacaacttttcattaaaaacttaccatttaaagtacttaaatagtgcccc 721  Q
     ||||||| ||||||||||||||||||||||||||||  ||||| ||||||||    
T  35496612 ttacacaatttttcattaaaaacttaccatttaaagtgtttaaagagtgcccc 35496560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 569 - 721
Target Start/End: Complemental strand, 28663276 - 28663126
Alignment:
Q  569 agggtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcattta 668  Q
    |||||||||||||||||||| || | |||||||||||||||||  || ||||  ||||||| ||| |||||||||||||||||||||| ||||||||| |    
T  28663276 agggtcttgttaacgagtgc-cctgaggcactctttaagcatcataactttag-aattattcttttaaaaagtcaactattacaattttcaatgcattca 28663179  T
Q  669 atacacaacttttcattaaaaacttaccatttaaagtacttaaatagtgcccc 721  Q
    |||||||| |||||||||||| ||||| ||||||||| |||||| ||||||||    
T  28663178 atacacaatttttcattaaaaccttactatttaaagtgcttaaagagtgcccc 28663126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 570 - 720
Target Start/End: Original strand, 43234758 - 43234908
Alignment:
Q  570 gggtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaa 669  Q
    ||||||||||||||||||||| |||| || ||||||||||||| | ||||| |||||||| ||| ||||| | |||||||||||||| || | |||| ||    
T  43234758 gggtcttgttaacgagtgctctcgggacattctttaagcatcctatatttagtaattattcttttaaaaaataaactattacaatttccattacattcaa 43234857  T
Q  670 tacacaacttttcattaaaaacttaccatttaaagtacttaaatagtgccc 720  Q
    |||| |||||||||||||||| |||| ||||||||| |||||| |||||||    
T  43234858 tacataacttttcattaaaaatttactatttaaagtgcttaaagagtgccc 43234908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 572 - 722
Target Start/End: Complemental strand, 21727542 - 21727392
Alignment:
Q  572 gtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaata 671  Q
    ||||||||||||| | |  |||||||| |||||||||||| | |||||| |||||||| ||| |||||||||||||||||||||| |||| |||| ||||    
T  21727542 gtcttgttaacgaatacctccggggcattctttaagcatctccaatttagtaattattcttttaaaaagtcaactattacaatttccaatacattcaata 21727443  T
Q  672 cacaacttttcattaaaaacttaccatttaaagtacttaaatagtgcccca 722  Q
    ||||| | || |||||||||||| ||||| |||| |||||| |||||||||    
T  21727442 cacaaatatttattaaaaacttatcatttgaagtgcttaaagagtgcccca 21727392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 573 - 721
Target Start/End: Complemental strand, 43224221 - 43224074
Alignment:
Q  573 tcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaatac 672  Q
    |||||||||||| ||| |||||| |||||||||||||||| ||| |||   |||||| ||| |||||||||||| ||||||||| ||||| || ||||||    
T  43224221 tcttgttaacgaatgcccccggg-cactctttaagcatcctaaaattagatattattcttttaaaaagtcaactgttacaatttccaatgtatgtaatac 43224123  T
Q  673 acaacttttcattaaaaacttaccatttaaagtacttaaatagtgcccc 721  Q
    ||||||||||||||||||||| | ||||||||| |||||| | ||||||    
T  43224122 acaacttttcattaaaaacttgctatttaaagtgcttaaagaatgcccc 43224074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 595 - 717
Target Start/End: Complemental strand, 39321095 - 39320973
Alignment:
Q  595 ggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaatacacaacttttcattaaaaactta 694  Q
    |||||||||||||||| |||||||||  ||||||| ||| |||||||||||||||||||||| ||||| ||| |||||||||||||| || |||||||||    
T  39321095 ggcactctttaagcataccaaatttaacaattattcttttaaaaagtcaactattacaattttcaatgtattcaatacacaacttttaataaaaaactta 39320996  T
Q  695 ccatttaaagtacttaaatagtg 717  Q
    | | ||||||| |||||| ||||    
T  39320995 ctaattaaagtgcttaaagagtg 39320973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 595 - 720
Target Start/End: Original strand, 35731280 - 35731405
Alignment:
Q  595 ggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaatacacaacttttcattaaaaactta 694  Q
    |||||||||||||||| |||||||||  || |||| ||| |||||||||||||||||||||| ||||||| |||||||||||||||| || || ||||||    
T  35731280 ggcactctttaagcataccaaatttaacaactattcttttaaaaagtcaactattacaatttccaatgcacttaatacacaactttttataaagaactta 35731379  T
Q  695 ccatttaaagtacttaaatagtgccc 720  Q
    | | ||||||| |||||| |||||||    
T  35731380 ctaattaaagtgcttaaagagtgccc 35731405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 571 - 703
Target Start/End: Complemental strand, 40754083 - 40753952
Alignment:
Q  571 ggtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaat 670  Q
    |||||||||||||||||||    |  |||||||||| ||||  ||||||| |||||||| ||||||||| |||||||||||| ||| |||| ||||||||    
T  40754083 ggtcttgttaacgagtgctatttgaccactctttaaacatcataaatttaataattattttttaaaaaaatcaactattacatttt-caatacatttaat 40753985  T
Q  671 acacaacttttcattaaaaacttaccatttaaa 703  Q
    |||||||||||||||||||||||| ||||||||    
T  40753984 acacaacttttcattaaaaacttatcatttaaa 40753952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 568 - 695
Target Start/End: Original strand, 27337665 - 27337790
Alignment:
Q  568 tagggtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcattt 667  Q
    |||||| |||||||||| |||||||||  ||||||||||| ||| ||||||||  ||||||| ||||||||| |||||||||||| |||||||| ||||     
T  27337665 tagggttttgttaacgaatgctcccgga-cactctttaag-atctcaaatttaacaattattctttaaaaaaatcaactattacagtttacaatacatta 27337762  T
Q  668 aatacacaacttttcattaaaaacttac 695  Q
    ||||||||||||||||| ||||||||||    
T  27337763 aatacacaacttttcataaaaaacttac 27337790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 569 - 721
Target Start/End: Complemental strand, 14651523 - 14651377
Alignment:
Q  569 agggtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcattta 668  Q
    ||||||||| |||||||||| ||||||||||| |||||| |||| ||||||| |||||||| |       |||||||| ||||||||| ||||||| | |    
T  14651523 agggtcttgctaacgagtgcccccggggcactttttaagtatcctaaatttagtaattattctc------agtcaactgttacaatttccaatgcaatca 14651430  T
Q  669 atacacaacttttcattaaaaacttaccatttaaagtacttaaatagtgcccc 721  Q
     |||||||||||||||||||||| ||| |||| |||| |||||| ||||||||    
T  14651429 ttacacaacttttcattaaaaacctactattttaagtgcttaaagagtgcccc 14651377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 569 - 705
Target Start/End: Original strand, 25886137 - 25886273
Alignment:
Q  569 agggtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcattta 668  Q
    ||||| |||||||| ||||  | ||||| ||||||||| |||   |||||||  ||||||| | | | |||||||||||||||||||| |||| ||||||    
T  25886137 agggttttgttaactagtgtcctcggggtactctttaaacattttaaatttagaaattattctcttagaaagtcaactattacaattttcaatacattta 25886236  T
Q  669 atacacaacttttcattaaaaacttaccatttaaagt 705  Q
    ||||||||||||||||  |||||||||||||||||||    
T  25886237 atacacaacttttcatataaaacttaccatttaaagt 25886273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 570 - 717
Target Start/End: Original strand, 7653554 - 7653691
Alignment:
Q  570 gggtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaa 669  Q
    |||||||||||||||||||||||||||||||| |          |||||||  || |||| ||| |||||||||||||||| ||||| |||| |||| |     
T  7653554 gggtcttgttaacgagtgctcccggggcactcct----------aaatttagcaactattcttttaaaaagtcaactattataatttccaattcattcat 7653643  T
Q  670 tacacaacttttcattaaaaacttaccatttaaagtacttaaatagtg 717  Q
    ||||||||||||||||||||||||||  |||||||| |||||| ||||    
T  7653644 tacacaacttttcattaaaaacttactttttaaagtgcttaaagagtg 7653691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 597 - 705
Target Start/End: Complemental strand, 37158467 - 37158359
Alignment:
Q  597 cactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaatacacaacttttcattaaaaacttacc 696  Q
    |||| |||||| |||| ||||||| |||||||||||| |||||||||||||||||||||| ||||||| | |||||| || |||| || ||||| |||      
T  37158467 cactttttaagaatccaaaatttagtaattattattttaaaaagtcaactattacaattttcaatgcagtgaatacataattttttataaaaaatttatt 37158368  T
Q  697 atttaaagt 705  Q
    |||||||||    
T  37158367 atttaaagt 37158359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 565 - 656
Target Start/End: Original strand, 27870391 - 27870480
Alignment:
Q  565 ttatagggtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaattt 656  Q
    |||| ||||||||||||||||||||||||| ||||||||||| ||| ||| ||||| |||||||| |||  |||||||||||||||||||||    
T  27870391 ttattgggtcttgttaacgagtgctcccggagcactctttaaacat-ccatatttagtaattattcttt-taaaagtcaactattacaattt 27870480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 612 - 721
Target Start/End: Original strand, 3692887 - 3692997
Alignment:
Q  612 ccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaatacacaacttttcat-taaaaacttaccatttaaagtactta 710  Q
    |||||||||  ||||||| ||| ||||| |||||||||||||||| ||||||| | ||||||||| |||||||  |||||||||| | ||||| ||||||    
T  3692887 ccaaatttagcaattattcttttaaaaaatcaactattacaatttccaatgcactcaatacacaatttttcataaaaaaacttactaattaaaatactta 3692986  T
Q  711 aatagtgcccc 721  Q
    || ||||||||    
T  3692987 aagagtgcccc 3692997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 572 - 721
Target Start/End: Complemental strand, 10032057 - 10031909
Alignment:
Q  572 gtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaata 671  Q
    |||| |||||||||||| |||||| |||||||||||||| ||||| ||| |||||||| ||| ||||||| || | || | |||| ||||||||| | ||    
T  10032057 gtctcgttaacgagtgcccccgggacactctttaagcattccaaaattagtaattatttttttaaaaagttaaatgtttcgatttccaatgcattgatta 10031958  T
Q  672 cacaacttttcattaaaaacttaccatttaaagtacttaaatagtgcccc 721  Q
    ||||  |||||| |||| || ||| ||||| ||| |||||| ||||||||    
T  10031957 cacactttttca-taaatacatactatttatagtccttaaagagtgcccc 10031909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 572 - 689
Target Start/End: Original strand, 42935978 - 42936093
Alignment:
Q  572 gtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaata 671  Q
    ||||||||||||||| | |||| | |||||| |||||||   |||  || |||||||| ||| ||||| |||||||||||||||| ||||||||||||||    
T  42935978 gtcttgttaacgagttcccccgag-cactctctaagcattttaaaactagtaattattcttttaaaaaatcaactattacaattt-caatgcatttaata 42936075  T
Q  672 cacaacttttcattaaaa 689  Q
    ||||| ||||||||||||    
T  42936076 cacaatttttcattaaaa 42936093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 573 - 681
Target Start/End: Original strand, 44592837 - 44592945
Alignment:
Q  573 tcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaatac 672  Q
    ||||||||||||||| | | ||  ||||||||||  || | ||||||| |||||||| ||| ||||||| |||||||||||||| ||||| ||| |||||    
T  44592837 tcttgttaacgagtgtttctggaacactctttaaatattcaaaatttaataattattcttttaaaaagttaactattacaattttcaatgtattcaatac 44592936  T
Q  673 acaactttt 681  Q
    |||||||||    
T  44592937 acaactttt 44592945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 589 - 675
Target Start/End: Complemental strand, 22618816 - 22618730
Alignment:
Q  589 tcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaatacaca 675  Q
    |||||||||| |||||||| ||||||||||||  |||||||  || |||| ||||||||||||||||| ||||||||| | ||||||    
T  22618816 tcccggggcagtctttaaggatcccaaatttaaaaattatttcttcaaaatgtcaactattacaattttcaatgcattgactacaca 22618730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 570 - 702
Target Start/End: Original strand, 34681661 - 34681791
Alignment:
Q  570 gggtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaa 669  Q
    ||||||| ||||||||||| ||||||||| ||||||||||| | |||||    ||||||| |||| ||||||||| || | |||||| ||||||||| ||    
T  34681661 gggtcttcttaacgagtgc-cccggggcagtctttaagcattctaaattaggaaattattttttacaaaagtcaaatagttcaatttccaatgcattaaa 34681759  T
Q  670 tacacaacttttcattaaaaacttaccatttaa 702  Q
    ||||||| |||| | |||||| |||| ||||||    
T  34681760 tacacaagttttta-taaaaagttactatttaa 34681791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 574 - 666
Target Start/End: Original strand, 46726109 - 46726200
Alignment:
Q  574 cttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatt 666  Q
    ||||||||||||||| |||||| ||||||||||| || |||||||||  || |||| |||||||||||||| | |||||| || |||||||||    
T  46726109 cttgttaacgagtgcccccggg-cactctttaaggataccaaatttaaaaaatattctttaaaaaagtcaaatgttacaaatttcaatgcatt 46726200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 597 - 717
Target Start/End: Complemental strand, 9719101 - 9718985
Alignment:
Q  597 cactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaatacacaacttttcattaaaaacttacc 696  Q
    |||||||||||||| | |||||||  |||||||||||  |||    |||| ||||||||| ||||| ||| | |||| ||||||||||  ||||||||||    
T  9719101 cactctttaagcattctaaatttagaaattattattttcaaa----aactgttacaattttcaatgtattcattacataacttttcatataaaacttacc 9719006  T
Q  697 atttaaagtacttaaatagtg 717  Q
    ||||||||| |||||| ||||    
T  9719005 atttaaagtgcttaaagagtg 9718985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 572 - 718
Target Start/End: Complemental strand, 31902884 - 31902740
Alignment:
Q  572 gtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaata 671  Q
    |||||||||||||||| |||||||||||| ||||||||   |||| | |  |||||||  |||| |||||||| |||| |||||| |||| |||| | ||    
T  31902884 gtcttgttaacgagtg-tcccggggcactttttaagcaattcaaaataagaaattattccttaagaaagtcaaatatttcaattttcaatacattgacta 31902786  T
Q  672 cacaacttttcattaaaaacttaccatttaaagtacttaaatagtgc 718  Q
    ||||| |||||  |||||| |||| ||||||||| |||||| |||||    
T  31902785 cacaa-ttttccataaaaatttactatttaaagtccttaaagagtgc 31902740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 569 - 711
Target Start/End: Complemental strand, 34299882 - 34299741
Alignment:
Q  569 agggtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcattta 668  Q
    |||||||||||||||||||| ||||||||||| ||||||||| | | ||| |  ||||||| |||||||| |||||   || |||||||||| ||| | |    
T  34299882 agggtcttgttaacgagtgcccccggggcactttttaagcatgctagattaagcaattattctttaaaaatgtcaaagttttcaatttacaaagcactga 34299783  T
Q  669 atacacaacttttcattaaaaacttaccatttaaagtacttaa 711  Q
     |||||||  ||||| |||||| |||| |||||| || |||||    
T  34299782 ttacacaaactttca-taaaaagttactatttaaggtccttaa 34299741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 570 - 703
Target Start/End: Original strand, 36973304 - 36973438
Alignment:
Q  570 gggtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattattt-aaaaaagtcaactattacaatttacaatgcattta 668  Q
    |||||||||||||||||||  |||| ||||||||||||||| |||||||    | ||||| ||| |||||| |||| || | |||||| ||||||| | |    
T  36973304 gggtcttgttaacgagtgcctccggtgcactctttaagcattccaaattaggaagttattctttaaaaaaaatcaaataattcaatttccaatgcaataa 36973403  T
Q  669 atacacaacttttcattaaaaacttaccatttaaa 703  Q
    ||| |||| ||||||| ||||| |||| |||||||    
T  36973404 atatacaaattttcataaaaaaattactatttaaa 36973438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 658 - 712
Target Start/End: Complemental strand, 48488228 - 48488174
Alignment:
Q  658 caatgcatttaatacacaacttttcattaaaaacttaccatttaaagtacttaaa 712  Q
    ||||||||| |||||| |||||||||||||||||||| |||||||||| ||||||    
T  48488228 caatgcattgaatacataacttttcattaaaaacttatcatttaaagtgcttaaa 48488174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 597 - 666
Target Start/End: Complemental strand, 33887963 - 33887894
Alignment:
Q  597 cactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatt 666  Q
    |||||||||||||| ||||| | | |||||||| |||||||||||||| |||| |||||| |||||||||    
T  33887963 cactctttaagcattccaaaataaataattattctttaaaaaagtcaaatatttcaattttcaatgcatt 33887894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 573 - 684
Target Start/End: Original strand, 18801012 - 18801122
Alignment:
Q  573 tcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaatac 672  Q
    ||||||||| |||||| | ||| | |||||||||| || | |||||||  ||||| | |||  ||||||||||||||||||||| |||| || | |||||    
T  18801012 tcttgttaatgagtgccctcggagaactctttaaggattc-aaatttagcaattactcttttcaaaagtcaactattacaattttcaatacaatgaatac 18801110  T
Q  673 acaacttttcat 684  Q
    ||||||||||||    
T  18801111 acaacttttcat 18801122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 570 - 701
Target Start/End: Original strand, 18926296 - 18926425
Alignment:
Q  570 gggtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaa 669  Q
    |||| ||||||||||||| |||  |||||||||||||||||   ||||     ||||||| |||||||| || || || | |||||| ||||||||| ||    
T  18926296 gggttttgttaacgagtg-tcctagggcactctttaagcattttaaatcatgaaattattctttaaaaaggtgaaatagttcaattttcaatgcattgaa 18926394  T
Q  670 tacacaacttttcattaaaaacttaccattta 701  Q
    |||||||||||||| |||||| ||||||||||    
T  18926395 tacacaacttttca-taaaaagttaccattta 18926425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 614 - 705
Target Start/End: Complemental strand, 26239635 - 26239544
Alignment:
Q  614 aaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaatacacaacttttcattaaaaacttaccatttaaagt 705  Q
    |||||||  ||||||| ||| ||||||| |||  ||| | ||| ||||||||| |||| |||| |||||||||||||||||| |||||||||    
T  26239635 aaatttagcaattattctttcaaaaagttaacgtttatagtttccaatgcattgaatatacaatttttcattaaaaacttactatttaaagt 26239544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 614 - 712
Target Start/End: Complemental strand, 32051426 - 32051330
Alignment:
Q  614 aaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaatacacaacttttcattaaaaacttaccatttaaagtacttaaa 712  Q
    ||||||| |||||||| |||  ||||||||||||| ||||||| ||  ||||| |||| |  | |||||||||||||||||| ||||||||| ||||||    
T  32051426 aaatttagtaattatttttttgaaaagtcaactatgacaattttcatagcattcaatata--atttttcattaaaaacttactatttaaagtgcttaaa 32051330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 597 - 656
Target Start/End: Complemental strand, 32699862 - 32699804
Alignment:
Q  597 cactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaattt 656  Q
    |||||||||| |||||||||||||  ||||||| ||||||||| ||||||||||||||||    
T  32699862 cactctttaatcatcccaaatttaaaaattattttttaaaaaa-tcaactattacaattt 32699804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 626 - 717
Target Start/End: Complemental strand, 34117953 - 34117862
Alignment:
Q  626 tattatttaaaaaagtcaactattacaatttacaatgcatttaatacacaacttttcattaaaaacttaccatttaaagtacttaaatagtg 717  Q
    |||||||| | ||||||||||||||| |||| |||||| || | || |||| |||| |||||||||||| |||||||| | |||||| ||||    
T  34117953 tattattttagaaagtcaactattacgatttccaatgcgttaattatacaattttttattaaaaacttatcatttaaaatgcttaaagagtg 34117862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 569 - 675
Target Start/End: Original strand, 1360504 - 1360609
Alignment:
Q  569 agggtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcattta 668  Q
    |||||||||||| | ||||  |||||| |||||||||||||| ||||| ||| |||||||| ||||||||||| || | || | |||| ||||||||| |    
T  1360504 agggtcttgtta-caagtgtccccgggacactctttaagcattccaaaattagtaattattttttaaaaaagttaaatgtttcgatttccaatgcattga 1360602  T
Q  669 atacaca 675  Q
     ||||||    
T  1360603 ttacaca 1360609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 574 - 703
Target Start/End: Original strand, 35567088 - 35567215
Alignment:
Q  574 cttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaataca 673  Q
    ||||||||||| ||||||  ||||||||||| |||||  ||||||    ||||||| |||||||||||||| ||||  ||||| |||| |||| ||||||    
T  35567088 cttgttaacgaatgctcc--gggcactcttttagcatttcaaattagaaaattattttttaaaaaagtcaaatattttaatttccaatacattaaataca 35567185  T
Q  674 caacttttcattaaaaacttaccatttaaa 703  Q
    ||  |||| || ||||| ||| ||||||||    
T  35567186 catatttttataaaaaagttatcatttaaa 35567215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 569 - 610
Target Start/End: Complemental strand, 27766825 - 27766784
Alignment:
Q  569 agggtcttgttaacgagtgctcccggggcactctttaagcat 610  Q
    |||||||||||||||||||| ||| |||||||||||||||||    
T  27766825 agggtcttgttaacgagtgcccccagggcactctttaagcat 27766784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 626 - 694
Target Start/End: Complemental strand, 47778636 - 47778569
Alignment:
Q  626 tattatttaaaaaagtcaactattacaatttacaatgcatttaatacacaacttttcattaaaaactta 694  Q
    |||||||| |||||||||||||||||||||| ||||| | | ||||||||| |||| | ||||||||||    
T  47778636 tattattttaaaaagtcaactattacaatttccaatgtagtgaatacacaatttttta-taaaaactta 47778569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 626 - 717
Target Start/End: Original strand, 10200593 - 10200683
Alignment:
Q  626 tattatttaaaaaagtcaactattacaatttacaatgcatttaatacacaacttttcattaaaaacttaccatttaaagtacttaaatagtg 717  Q
    |||| ||| |||||||||||  |||||||||  |||||||| |||||| ||| ||||  |||||||||| |||||||||| |||||| ||||    
T  10200593 tattcttttaaaaagtcaaccgttacaatttcaaatgcattaaatacataac-tttctataaaaacttatcatttaaagtgcttaaagagtg 10200683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 570 - 616
Target Start/End: Complemental strand, 17157908 - 17157862
Alignment:
Q  570 gggtcttgttaacgagtgctcccggggcactctttaagcatcccaaa 616  Q
    ||||||||||||||||||| |  |||||||||||||||||| |||||    
T  17157908 gggtcttgttaacgagtgcccttggggcactctttaagcattccaaa 17157862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 569 - 639
Target Start/End: Original strand, 17302858 - 17302928
Alignment:
Q  569 agggtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaa 639  Q
    |||||||||||||||||||| |||||  |||||||||||||| || |||  |  ||||||||||| |||||    
T  17302858 agggtcttgttaacgagtgcccccggtacactctttaagcattcctaataaagaaattattattttaaaaa 17302928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 570 - 616
Target Start/End: Original strand, 32829094 - 32829140
Alignment:
Q  570 gggtcttgttaacgagtgctcccggggcactctttaagcatcccaaa 616  Q
    |||||||||||||||||| ||| |||||| ||||||||||| |||||    
T  32829094 gggtcttgttaacgagtgttcctggggcattctttaagcattccaaa 32829140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 571 - 689
Target Start/End: Complemental strand, 35599939 - 35599821
Alignment:
Q  571 ggtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaat 670  Q
    ||||||||||||||||||  ||| |  ||||||||| ||| | |||||    ||||||| ||||||||| |||| || | ||| || ||||||||| |||    
T  35599939 ggtcttgttaacgagtgcctccgagatactctttaaacatactaaattaggaaattattctttaaaaaattcaaatagttcaaatttcaatgcattgaat 35599840  T
Q  671 acacaacttttcattaaaa 689  Q
    ||| |||||||||| ||||    
T  35599839 acataacttttcataaaaa 35599821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 570 - 644
Target Start/End: Complemental strand, 44719534 - 44719460
Alignment:
Q  570 gggtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaa 644  Q
    ||||||||||||| ||||| ||||||||||| ||||||    ||||| |||  ||||||| ||||||||||||||    
T  44719534 gggtcttgttaacaagtgcccccggggcactatttaagttatccaaaattagcaattattttttaaaaaagtcaa 44719460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 576 - 609
Target Start/End: Complemental strand, 27123410 - 27123377
Alignment:
Q  576 tgttaacgagtgctcccggggcactctttaagca 609  Q
    ||||||||||||| ||||||||||||||||||||    
T  27123410 tgttaacgagtgcccccggggcactctttaagca 27123377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 576 - 609
Target Start/End: Complemental strand, 44537477 - 44537444
Alignment:
Q  576 tgttaacgagtgctcccggggcactctttaagca 609  Q
    ||||||||||||| ||||||||||||||||||||    
T  44537477 tgttaacgagtgcccccggggcactctttaagca 44537444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 101; Significance: 1e-49; HSPs: 60)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 569 - 721
Target Start/End: Original strand, 8297838 - 8297990
Alignment:
Q  569 agggtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcattta 668  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||| ||| |||| ||||||| ||||||||| ||||||||| |    
T  8297838 agggtcttgttaacgagtgcccccggggcactctttaagcatcccaaatttagtaattattcttttaaaatgtcaactgttacaatttccaatgcattca 8297937  T
Q  669 atacacaacttttcattaaaaacttaccatttaaagtacttaaatagtgcccc 721  Q
    |||||||| |||||||||||||||||| ||||||||| |||||| | ||||||    
T  8297938 atacacaatttttcattaaaaacttactatttaaagtgcttaaagattgcccc 8297990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 565 - 705
Target Start/End: Complemental strand, 7444529 - 7444388
Alignment:
Q  565 ttatagggtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattattt-aaaaaagtcaactattacaatttacaatgc 663  Q
    |||||||||||||||||||||||||||||   |||| ||||||||||||||||||| |||||||  ||| ||||||||||||||||||||||| ||||||    
T  7444529 ttatagggtcttgttaacgagtgctcccgatacactttttaagcatcccaaatttagtaattatacttttaaaaaagtcaactattacaattttcaatgc 7444430  T
Q  664 atttaatacacaacttttcattaaaaacttaccatttaaagt 705  Q
    ||| ||||||||||||||| |||||||||||  |||||||||    
T  7444429 attcaatacacaacttttctttaaaaacttagtatttaaagt 7444388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 597 - 721
Target Start/End: Complemental strand, 7852655 - 7852531
Alignment:
Q  597 cactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaatacacaacttttcattaaaaacttacc 696  Q
    |||||||||||||||| ||||||| |||||||| ||| ||||| | |||||||||||||| ||||||||||||||||||||||||||||||||||||||     
T  7852655 cactctttaagcatcctaaatttagtaattattcttttaaaaaattaactattacaattttcaatgcatttaatacacaacttttcattaaaaacttact 7852556  T
Q  697 atttaaagtacttaaatagtgcccc 721  Q
    ||||||||| |||||| ||||||||    
T  7852555 atttaaagtgcttaaagagtgcccc 7852531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 565 - 705
Target Start/End: Original strand, 51834877 - 51835017
Alignment:
Q  565 ttatagggtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgca 664  Q
    ||||||||||||||||| ||||   |||||| |||||||||||||||| |||||||  ||||||| ||| |||||||||||||||| ||||| |||||||    
T  51834877 ttatagggtcttgttaatgagtttccccgggacactctttaagcatcctaaatttagcaattattcttttaaaaagtcaactattataatttccaatgca 51834976  T
Q  665 tttaatacacaacttttcattaaaaacttaccatttaaagt 705  Q
    || ||||||||||||||||||||||| |||| |||||||||    
T  51834977 ttaaatacacaacttttcattaaaaatttactatttaaagt 51835017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 572 - 703
Target Start/End: Complemental strand, 27953176 - 27953046
Alignment:
Q  572 gtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaata 671  Q
    ||||||||||||||||   |||| |||||||||||||||| |||||||| || ||||||||| ||||||| |||||||||||||| ||||||||| ||||    
T  27953176 gtcttgttaacgagtgtctccggagcactctttaagcatctcaaatttagta-ttattattttaaaaagttaactattacaattttcaatgcattcaata 27953078  T
Q  672 cacaacttttcattaaaaacttaccatttaaa 703  Q
    ||||||||||| ||||||||||||||||||||    
T  27953077 cacaacttttcgttaaaaacttaccatttaaa 27953046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 569 - 712
Target Start/End: Complemental strand, 35777838 - 35777695
Alignment:
Q  569 agggtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcattta 668  Q
    |||||||||||||| |||||   | ||  ||||||||| ||||||||||||| |||||||| ||| ||||||| ||||||||||||||  |||||||| |    
T  35777838 agggtcttgttaactagtgccttcaggatactctttaaccatcccaaatttagtaattattcttttaaaaagttaactattacaatttctaatgcattca 35777739  T
Q  669 atacacaacttttcattaaaaacttaccatttaaagtacttaaa 712  Q
    ||||||||||||||||||||||||||||||||||||| ||||||    
T  35777738 atacacaacttttcattaaaaacttaccatttaaagtgcttaaa 35777695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 570 - 721
Target Start/End: Complemental strand, 45900287 - 45900136
Alignment:
Q  570 gggtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaa 669  Q
    ||||||||||||||||||| |||| |||||||||||||||||| |||||||  ||||||| ||| | |||||||||||| ||||||| ||||||||| ||    
T  45900287 gggtcttgttaacgagtgcccccgaggcactctttaagcatcctaaatttagcaattattcttttataaagtcaactatcacaatttccaatgcattcaa 45900188  T
Q  670 tacacaacttttcattaaaaacttaccatttaaagtacttaaatagtgcccc 721  Q
    |||||||||||||||   |||||||| | ||||||| |||||| ||||||||    
T  45900187 tacacaacttttcatatgaaacttactaattaaagtgcttaaagagtgcccc 45900136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 576 - 717
Target Start/End: Original strand, 37440800 - 37440941
Alignment:
Q  576 tgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaatacaca 675  Q
    |||||||||||| |||| || ||||||| || ||| | ||||||| |||||||||||| |||||||||||||||||||||| |||||  || |||||| |    
T  37440800 tgttaacgagtgttcccaggacactcttgaaacatgctaaatttagtaattattattttaaaaagtcaactattacaattttcaatgtgttcaatacata 37440899  T
Q  676 acttttcattaaaaacttaccatttaaagtacttaaatagtg 717  Q
    | ||||||||| ||| ||||||||||||||||||||| ||||    
T  37440900 atttttcattataaatttaccatttaaagtacttaaagagtg 37440941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 569 - 689
Target Start/End: Original strand, 49400580 - 49400699
Alignment:
Q  569 agggtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcattta 668  Q
    ||||||||||||||||||||||| | | |||| ||||||||||| ||||||| |||||||| ||| ||||| |||||||||||||||| ||||| |||||    
T  49400580 agggtcttgttaacgagtgctccagag-cactatttaagcatcctaaatttagtaattattcttttaaaaaatcaactattacaatttccaatgtattta 49400678  T
Q  669 atacacaacttttcattaaaa 689  Q
    |||||| ||||||||||||||    
T  49400679 atacacgacttttcattaaaa 49400699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 575 - 721
Target Start/End: Complemental strand, 50341998 - 50341854
Alignment:
Q  575 ttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaatacac 674  Q
    |||||||||||||   |||||||||| | ||||||| ||||||||| |||||||| ||| |||||||||||||||||||||| ||| ||||| |||||||    
T  50341998 ttgttaacgagtgt--ccggggcactttgtaagcattccaaatttagtaattattcttttaaaaagtcaactattacaatttccaacgcattcaatacac 50341901  T
Q  675 aacttttcattaaaaacttaccatttaaagtacttaaatagtgcccc 721  Q
    ||||||||||| |||| |||| || |||||| |||||| ||| ||||    
T  50341900 aacttttcatttaaaatttactatataaagtgcttaaagagtacccc 50341854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 571 - 721
Target Start/End: Complemental strand, 24175535 - 24175386
Alignment:
Q  571 ggtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaat 670  Q
    |||||||||||||||||  |   || |||||||||||||||| ||||||| ||| |||| ||| |||| || ||||||||||||||  ||||||||||||    
T  24175535 ggtcttgttaacgagtgtccttaggacactctttaagcatcctaaatttagtaaatattcttttaaaa-gtaaactattacaattttaaatgcatttaat 24175437  T
Q  671 acacaacttttcattaaaaacttaccatttaaagtacttaaatagtgcccc 721  Q
    |||||||||||| |  ||||||||||||||||||| |||||| ||||||||    
T  24175436 acacaacttttcgtacaaaacttaccatttaaagtgcttaaagagtgcccc 24175386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 568 - 718
Target Start/End: Original strand, 41462015 - 41462165
Alignment:
Q  568 tagggtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcattt 667  Q
    |||| |||||||||||||||  || || |||||||||||||||   | ||||| |||||||| ||| ||||||||||||||||||||||   ||||||||    
T  41462015 taggatcttgttaacgagtgtccctggagcactctttaagcattttatatttagtaattattcttttaaaaagtcaactattacaatttcttatgcattt 41462114  T
Q  668 aatacacaacttttcattaaaaacttaccatttaaagtacttaaatagtgc 718  Q
    |||||| || |||||||||||||||||| ||||||| | |||||| |||||    
T  41462115 aatacataatttttcattaaaaacttactatttaaaatgcttaaagagtgc 41462165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 572 - 705
Target Start/End: Original strand, 31690353 - 31690485
Alignment:
Q  572 gtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaata 671  Q
    |||||||||||||| || |||||| ||||||||||  || ||||||||| |||||||||||| |||||||||||| || |||||| ||||||||| ||||    
T  31690353 gtcttgttaacgagcgcccccgggacactctttaacgattccaaatttattaattattattt-aaaaagtcaactgttgcaattttcaatgcattgaata 31690451  T
Q  672 cacaacttttcattaaaaacttaccatttaaagt 705  Q
    ||||||||||||| | ||| |||| |||||||||    
T  31690452 cacaacttttcataagaaatttactatttaaagt 31690485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 598 - 712
Target Start/End: Complemental strand, 47995847 - 47995733
Alignment:
Q  598 actctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaatacacaacttttcattaaaaacttacca 697  Q
    ||||||||||||| | ||||||| |||||| | ||| ||||||| || ||||||||||| ||||||||| |||||| ||||||||||||||||||||| |    
T  47995847 actctttaagcattctaaatttagtaattactcttttaaaaagttaattattacaattttcaatgcattcaatacataacttttcattaaaaacttacaa 47995748  T
Q  698 tttaaagtacttaaa 712  Q
    |||||||| ||||||    
T  47995747 tttaaagtgcttaaa 47995733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 596 - 700
Target Start/End: Complemental strand, 49084513 - 49084408
Alignment:
Q  596 gcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatg-catttaatacacaacttttcattaaaaactta 694  Q
    |||||||||||  |||| ||||||| |||||||| ||| |||||||||||||||||||||| |||||  ||| |||||||||||||||||||||||||||    
T  49084513 gcactctttaattatcctaaatttagtaattattcttttaaaaagtcaactattacaattttcaatgaaattcaatacacaacttttcattaaaaactta 49084414  T
Q  695 ccattt 700  Q
    ||||||    
T  49084413 ccattt 49084408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 602 - 719
Target Start/End: Original strand, 50426989 - 50427106
Alignment:
Q  602 tttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaatacacaacttttcattaaaaacttaccattta 701  Q
    |||||||||| |||||||| |||||||| |||  ||||||||||||||||||||| ||||||| | || |||||||||||||||||||| |||| |||||    
T  50426989 tttaagcatctcaaatttagtaattattcttttgaaaagtcaactattacaatttccaatgcaatcaacacacaacttttcattaaaaatttactattta 50427088  T
Q  702 aagtacttaaatagtgcc 719  Q
    ||||  ||||| ||||||    
T  50427089 aagtgtttaaagagtgcc 50427106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 597 - 705
Target Start/End: Complemental strand, 25115374 - 25115267
Alignment:
Q  597 cactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaatacacaacttttcattaaaaacttacc 696  Q
    ||||||||||| |||| ||||||| |||||||||||| ||||||| |||||||||||||| ||||||| | |||||||||||||| | |||||||||||     
T  25115374 cactctttaagaatccaaaatttagtaattattattttaaaaagttaactattacaatttccaatgcagtgaatacacaacttttta-taaaaacttact 25115276  T
Q  697 atttaaagt 705  Q
    |||||||||    
T  25115275 atttaaagt 25115267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 635 - 722
Target Start/End: Original strand, 8261141 - 8261228
Alignment:
Q  635 aaaaagtcaactattacaatttacaatgcatttaatacacaacttttcattaaaaacttaccatttaaagtacttaaatagtgcccca 722  Q
    |||||||||||| ||||||||| |||||||||||||||| ||||||||||||||||||||| ||||||||| ||| || |||||||||    
T  8261141 aaaaagtcaactgttacaattttcaatgcatttaatacataacttttcattaaaaacttactatttaaagtgcttgaagagtgcccca 8261228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 635 - 722
Target Start/End: Original strand, 8274558 - 8274645
Alignment:
Q  635 aaaaagtcaactattacaatttacaatgcatttaatacacaacttttcattaaaaacttaccatttaaagtacttaaatagtgcccca 722  Q
    |||||||||||| ||||||||| |||||||||||||||| ||||||||||||||||||||| ||||||||| ||| || |||||||||    
T  8274558 aaaaagtcaactgttacaattttcaatgcatttaatacataacttttcattaaaaacttactatttaaagtgcttgaagagtgcccca 8274645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 572 - 711
Target Start/End: Complemental strand, 53014341 - 53014203
Alignment:
Q  572 gtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaata 671  Q
    |||||||||||| ||| |||  ||||||| ||||| ||||| ||||||| |||||||  ||| ||||| | |||||||||||||| |||| |||| ||||    
T  53014341 gtcttgttaacgggtg-tccttgggcactttttaaacatcctaaatttagtaattatctttttaaaaaattaactattacaatttccaatacattcaata 53014243  T
Q  672 cacaacttttcattaaaaacttaccatttaaagtacttaa 711  Q
    |||||||||| ||||||||| ||||||||||||| |||||    
T  53014242 cacaactttttattaaaaacataccatttaaagtgcttaa 53014203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 569 - 703
Target Start/End: Original strand, 20394605 - 20394737
Alignment:
Q  569 agggtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcattta 668  Q
    ||||| |||||||||||||   || | ||||||||||||||||||||||||| |||||||| ||| ||||||| |||||||||||||| |||| |||| |    
T  20394605 agggttttgttaacgagtgtctccagagcactctttaagcatcccaaatttagtaattattcttttaaaaagtgaactattacaatttccaatacattca 20394704  T
Q  669 atacacaacttttcattaaaaacttaccatttaaa 703  Q
    ||||| |  |||||||||||||||| |||||||||    
T  20394705 ataca-acattttcattaaaaactt-ccatttaaa 20394737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 605 - 712
Target Start/End: Original strand, 31429280 - 31429387
Alignment:
Q  605 aagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaatacacaacttttcattaaaaacttaccatttaaag 704  Q
    |||||| ||| |||||  ||||||| ||| ||||| |||||||||||||||| ||||||||| |||||||||||||||||| ||||||||| | ||||||    
T  31429280 aagcattccatatttaaaaattattcttttaaaaaatcaactattacaatttccaatgcattcaatacacaacttttcatttaaaacttactaattaaag 31429379  T
Q  705 tacttaaa 712  Q
    | ||||||    
T  31429380 tgcttaaa 31429387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 572 - 717
Target Start/End: Original strand, 37060522 - 37060664
Alignment:
Q  572 gtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaata 671  Q
    |||||||||||||||||  ||| |  ||||||||||||||||||||||| || || || || |||||| |||||||||| ||||| ||||||| ||||||    
T  37060522 gtcttgttaacgagtgcctccgag--actctttaagcatcccaaatttagta-ttctt-ttaaaaaaaatcaactattataattttcaatgcaattaata 37060617  T
Q  672 cacaactttt-cattaaaaacttaccatttaaagtacttaaatagtg 717  Q
    || || |||| |||||||||||||||||||||||| |||||| ||||    
T  37060618 cataattttttcattaaaaacttaccatttaaagtgcttaaaaagtg 37060664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 572 - 695
Target Start/End: Complemental strand, 39195862 - 39195740
Alignment:
Q  572 gtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaata 671  Q
    ||||||||||||||||| | |  ||||||||||||| |||  ||||||| || || || |||||||| ||||||||||||||||| ||||||||| ||||    
T  39195862 gtcttgttaacgagtgccctcaaggcactctttaaggatcttaaatttagtatttttt-tttaaaaaggtcaactattacaattttcaatgcattgaata 39195764  T
Q  672 cacaacttttcattaaaaacttac 695  Q
    |||||||||||||  |||||||||    
T  39195763 cacaacttttcatataaaacttac 39195740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 595 - 712
Target Start/End: Complemental strand, 31174764 - 31174647
Alignment:
Q  595 ggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaatacacaacttttcattaaaaactta 694  Q
    |||||||||||||||||  ||||||  |||||||| ||| ||||||| |||| ||||||||| ||||  ||| | ||||||||||||||||||||| |||    
T  31174764 ggcactctttaagcatctaaaattttgtaattattcttttaaaaagttaactgttacaattttcaatatattcattacacaacttttcattaaaaattta 31174665  T
Q  695 ccatttaaagtacttaaa 712  Q
     ||||||||||| |||||    
T  31174664 tcatttaaagtatttaaa 31174647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 597 - 717
Target Start/End: Complemental strand, 24229757 - 24229637
Alignment:
Q  597 cactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaatacacaacttttcattaaaaacttacc 696  Q
    |||||||||| || || ||||||| |||||||| |||  |||||| || ||| ||||||| ||||||||||||||||||| ||||||||||||||||       
T  24229757 cactctttaaacaaccaaaatttagtaattattctttttaaaagtaaattatcacaattttcaatgcatttaatacacaatttttcattaaaaacttttt 24229658  T
Q  697 atttaaagtacttaaatagtg 717  Q
    ||||||||| |||||| ||||    
T  24229657 atttaaagtgcttaaagagtg 24229637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 568 - 719
Target Start/End: Complemental strand, 41370308 - 41370158
Alignment:
Q  568 tagggtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcattt 667  Q
    |||||||||||||||||||| | |||| |||||| |||||||  ||||||| |  |||||||  | |||||||| || |||| |||||| |||||||||     
T  41370308 tagggtcttgttaacgagtgtttccggagcactcattaagcaatccaaattaagaaattatttctcaaaaaagttaaatatttcaattttcaatgcattg 41370209  T
Q  668 aatacacaacttttcattaaaaacttaccatttaaagtacttaaatagtgcc 719  Q
    | ||||||| |||||| ||||||||||| ||| ||||| |||||| ||||||    
T  41370208 attacacaaattttca-taaaaacttactattcaaagtccttaaaaagtgcc 41370158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 568 - 673
Target Start/End: Complemental strand, 23016362 - 23016257
Alignment:
Q  568 tagggtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcattt 667  Q
    |||||||||| ||||||| || ||||||||||||||| ||||| ||||||| |  |||||||||||||| |||||||  ||| |||||| |||||||||     
T  23016362 tagggtcttgctaacgagcgcccccggggcactctttgagcattccaaattaagaaattattatttaaagaagtcaaacatttcaatttccaatgcattg 23016263  T
Q  668 aataca 673  Q
    ||||||    
T  23016262 aataca 23016257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 569 - 693
Target Start/End: Complemental strand, 37138300 - 37138177
Alignment:
Q  569 agggtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcattta 668  Q
    ||||||||||||||||||| ||  ||||||||||||||| |   ||||||||  || |||| ||| |||||||||||||||| ||||| ||||||| | |    
T  37138300 agggtcttgttaacgagtgttct-ggggcactctttaaggaaatcaaatttagcaactattcttttaaaaagtcaactattataatttccaatgcactca 37138202  T
Q  669 atacacaacttttcattaaaaactt 693  Q
    |||||||||||||||| || |||||    
T  37138201 atacacaacttttcataaagaactt 37138177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 575 - 705
Target Start/End: Complemental strand, 34391838 - 34391710
Alignment:
Q  575 ttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaatacac 674  Q
    ||||||||||||||||| ||  |||| |||||  |||| ||||||| |||||||| ||| | |||||||  ||||||||||| ||||||| | |||||||    
T  34391838 ttgttaacgagtgctcc-ggaacact-tttaaatatccaaaatttagtaattattcttttataaagtcagttattacaatttccaatgcaatcaatacac 34391741  T
Q  675 aacttttcattaaaaacttaccatttaaagt 705  Q
    ||||||| ||||||||||||| |||| ||||    
T  34391740 aactttttattaaaaacttactattttaagt 34391710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 568 - 689
Target Start/End: Complemental strand, 49532390 - 49532270
Alignment:
Q  568 tagggtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcattt 667  Q
    ||||||||||||||||||||| |||||| |||||| ||||||| ||||||| |  ||||||| |||| |||| |||| || | |||||| |||||||||     
T  49532390 tagggtcttgttaacgagtgcccccgggacactctgtaagcattccaaattaagaaattattctttataaaa-tcaaataattcaatttccaatgcatta 49532292  T
Q  668 aatacacaacttttcattaaaa 689  Q
    ||||||||  |||| |||||||    
T  49532291 aatacacatgtttttattaaaa 49532270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 597 - 697
Target Start/End: Complemental strand, 37383865 - 37383766
Alignment:
Q  597 cactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaatacacaacttttcattaaaaacttacc 696  Q
    |||||||||||||||| ||||||| |||||||| ||||||||| |||||  ||| || || ||||||||| |||| ||||||||| |||||||| |||||    
T  37383865 cactctttaagcatccaaaatttagtaattattctttaaaaaa-tcaaccgttataacttccaatgcattcaatatacaactttttattaaaaatttacc 37383767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 628 - 712
Target Start/End: Original strand, 42222982 - 42223065
Alignment:
Q  628 ttatttaaaaaagtcaactattacaatttacaatgcatttaatacacaacttttcattaaaaacttaccatttaaagtacttaaa 712  Q
    ||||||||||||  ||||||||| ||||| ||||||||| ||||||||| |||| ||||||||||||||| || |||||||||||    
T  42222982 ttatttaaaaaac-caactattataattttcaatgcattcaatacacaattttttattaaaaacttaccactttaagtacttaaa 42223065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 635 - 694
Target Start/End: Original strand, 36702817 - 36702876
Alignment:
Q  635 aaaaagtcaactattacaatttacaatgcatttaatacacaacttttcattaaaaactta 694  Q
    |||||||||| ||||||||||| ||||||||| ||||||||| |||||||||||||||||    
T  36702817 aaaaagtcaattattacaattttcaatgcattcaatacacaatttttcattaaaaactta 36702876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 597 - 681
Target Start/End: Original strand, 51736349 - 51736433
Alignment:
Q  597 cactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaatacacaactttt 681  Q
    ||||||||||  || |||||||||  ||||||| ||| |||||||||||||||| ||||| |||| |||| ||||||||||||||    
T  51736349 cactctttaatgattccaaatttagcaattattcttttaaaaagtcaactattataattttcaatacattgaatacacaactttt 51736433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 570 - 689
Target Start/End: Original strand, 2063444 - 2063562
Alignment:
Q  570 gggtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaa 669  Q
    ||||||||||||||||||||||| || |||||||||||||| | |||||    | ||||| ||||||||||||||  | | |||||| ||||| ||| ||    
T  2063444 gggtcttgttaacgagtgctccc-ggacactctttaagcatgctaaattaggaagttattctttaaaaaagtcaaacagttcaatttccaatgtattaaa 2063542  T
Q  670 tacacaacttttcattaaaa 689  Q
    ||||||| ||||||| ||||    
T  2063543 tacacaaattttcataaaaa 2063562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 597 - 717
Target Start/End: Complemental strand, 13585368 - 13585252
Alignment:
Q  597 cactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaatacacaacttttcattaaaaacttacc 696  Q
    |||||||||||||| | |||||||  |||||||||||  |||    |||| ||||||||| ||||| ||| | |||| ||||||||||  ||||||||||    
T  13585368 cactctttaagcattctaaatttagaaattattattttcaaa----aactgttacaattttcaatgtattcattacataacttttcatataaaacttacc 13585273  T
Q  697 atttaaagtacttaaatagtg 717  Q
    ||||||||| |||||| ||||    
T  13585272 atttaaagtgcttaaagagtg 13585252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 572 - 675
Target Start/End: Complemental strand, 53737930 - 53737827
Alignment:
Q  572 gtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaata 671  Q
    |||||| |||||||||| ||| ||||||||||||||| | ||||| | |  ||||||| ||||||||| |||| |||| | |||| ||||||||| ||||    
T  53737930 gtcttgctaacgagtgcccccagggcactctttaagcgttccaaaataagaaattattctttaaaaaattcaaatatttcgatttccaatgcattgaata 53737831  T
Q  672 caca 675  Q
    ||||    
T  53737830 caca 53737827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 670 - 712
Target Start/End: Complemental strand, 23605705 - 23605663
Alignment:
Q  670 tacacaacttttcattaaaaacttaccatttaaagtacttaaa 712  Q
    |||||||||||||||||||||||||||||||||||| ||||||    
T  23605705 tacacaacttttcattaaaaacttaccatttaaagtgcttaaa 23605663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 571 - 721
Target Start/End: Complemental strand, 50086544 - 50086396
Alignment:
Q  571 ggtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaat 670  Q
    |||||||||||||||||| ||||||  ||||||||| ||| ||||| | |  ||||||| ||||||||| |||| ||||   |||| ||||||||| |||    
T  50086544 ggtcttgttaacgagtgc-cccgggaaactctttaaacattccaaaataaacaattattctttaaaaaaatcaaatattttgattttcaatgcattgaat 50086446  T
Q  671 acacaacttttcattaaaaacttaccatttaaagtacttaaatagtgcccc 721  Q
    |||||  |||||| ||||  ||||||| ||| ||| |||||| ||||||||    
T  50086445 acacatattttca-taaatgcttaccacttatagttcttaaagagtgcccc 50086396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 570 - 675
Target Start/End: Complemental strand, 31072608 - 31072503
Alignment:
Q  570 gggtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaa 669  Q
    ||||||||||||||||||| |||||| ||||||||||| |||  |||||||  || |||| ||| |||||||||| | |||||| || | ||||||| |     
T  31072608 gggtcttgttaacgagtgcccccgggccactctttaaggatcataaatttagaaaatattctttgaaaaagtcaaatgttacaaattcctatgcattgat 31072509  T
Q  670 tacaca 675  Q
    ||||||    
T  31072508 tacaca 31072503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 636 - 700
Target Start/End: Complemental strand, 14031411 - 14031347
Alignment:
Q  636 aaaagtcaactattacaatttacaatgcatttaatacacaacttttcattaaaaacttaccattt 700  Q
    |||||||||| |||||||| | ||||||||| |||| ||||||||||||  ||||||||||||||    
T  14031411 aaaagtcaacaattacaatattcaatgcattcaatatacaacttttcatataaaacttaccattt 14031347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 573 - 640
Target Start/End: Original strand, 8260173 - 8260240
Alignment:
Q  573 tcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaag 640  Q
    |||||||||||| ||| |  ||||||| |||||||||||||||||||| |||||||| ||| ||||||    
T  8260173 tcttgttaacgaatgccctaggggcaccctttaagcatcccaaatttagtaattattcttttaaaaag 8260240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 573 - 640
Target Start/End: Original strand, 8273591 - 8273658
Alignment:
Q  573 tcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaag 640  Q
    |||||||||||| ||| |  ||||||| |||||||||||||||||||| |||||||| ||| ||||||    
T  8273591 tcttgttaacgaatgccctaggggcaccctttaagcatcccaaatttagtaattattcttttaaaaag 8273658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 572 - 638
Target Start/End: Original strand, 21240639 - 21240705
Alignment:
Q  572 gtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaa 638  Q
    ||||||||||||| ||||||||||||| ||||||| ||| | ||||| |  ||||||||||||||||    
T  21240639 gtcttgttaacgaatgctcccggggcattctttaaacatgctaaattaagaaattattatttaaaaa 21240705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 570 - 644
Target Start/End: Complemental strand, 30978786 - 30978712
Alignment:
Q  570 gggtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaa 644  Q
    |||||||||||| |||||| || |||||||||||||||||| ||||||| |  ||| |||  |||||||||||||    
T  30978786 gggtcttgttaaggagtgcccctggggcactctttaagcattccaaattaagaaatgatttattaaaaaagtcaa 30978712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 575 - 653
Target Start/End: Complemental strand, 54552879 - 54552801
Alignment:
Q  575 ttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaa 653  Q
    ||||||||||||||  ||||||||||||||||| |||| |||||||  || |||| |||||||| ||||| | ||||||    
T  54552879 ttgttaacgagtgcctccggggcactctttaagaatcctaaatttagaaaatattctttaaaaaggtcaaatgttacaa 54552801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 597 - 694
Target Start/End: Complemental strand, 12618805 - 12618709
Alignment:
Q  597 cactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaatacacaacttttcattaaaaactta 694  Q
    |||||||||||||| |||||||||  ||||||| ||| |||||||||| | ||| || || ||||||||| | || |||| |||||| ||||||||||    
T  12618805 cactctttaagcattccaaatttagaaattatttttttaaaaagtcaaatgttataaatttcaatgcattgattatacaaattttca-taaaaactta 12618709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 609 - 694
Target Start/End: Original strand, 48315931 - 48316015
Alignment:
Q  609 atcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaatacacaacttttcattaaaaactta 694  Q
    |||||||||||   || |||| |||||||||||||| | |||||| || ||||||||| | |||||||||||||| ||||||||||    
T  48315931 atcccaaattttgaaaatattctttaaaaaagtcaaatgttacaaatttcaatgcattgattacacaacttttca-taaaaactta 48316015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 571 - 653
Target Start/End: Complemental strand, 13800831 - 13800751
Alignment:
Q  571 ggtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaa 653  Q
    |||||||||||||||||| |||    ||||||||||| |||| |||||||  || |||| |||||||||||||| ||||||||    
T  13800831 ggtcttgttaacgagtgcccccaa--cactctttaaggatcctaaatttagaaaatattctttaaaaaagtcaaatattacaa 13800751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 670 - 717
Target Start/End: Original strand, 24396254 - 24396301
Alignment:
Q  670 tacacaacttttcattaaaaacttaccatttaaagtacttaaatagtg 717  Q
    |||| ||||||||||  |||||||||||||||||||||||||| ||||    
T  24396254 tacataacttttcatataaaacttaccatttaaagtacttaaagagtg 24396301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 598 - 712
Target Start/End: Original strand, 48337552 - 48337667
Alignment:
Q  598 actctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaatacacaacttttcat-taaaaacttacc 696  Q
    ||||||||| |||||  ||||||  |||||||  || ||||| |||||||||||||||| ||||||||| | ||| ||| |||| ||  ||||||||||     
T  48337552 actctttaaacatccttaatttaacaattatttctttaaaaaatcaactattacaattttcaatgcattgattactcaattttttataaaaaaacttact 48337651  T
Q  697 atttaaagtacttaaa 712  Q
    ||||||| | ||||||    
T  48337652 atttaaaatgcttaaa 48337667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 576 - 607
Target Start/End: Original strand, 50086379 - 50086410
Alignment:
Q  576 tgttaacgagtgctcccggggcactctttaag 607  Q
    ||||||||||||||||||||||||||||||||    
T  50086379 tgttaacgagtgctcccggggcactctttaag 50086410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 575 - 638
Target Start/End: Original strand, 53261531 - 53261594
Alignment:
Q  575 ttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaa 638  Q
    |||||||||||||| ||| || |||||||||||||| | ||||| | |||||||| ||||||||    
T  53261531 ttgttaacgagtgcccccaggacactctttaagcatgctaaattaagtaattattctttaaaaa 53261594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 570 - 616
Target Start/End: Original strand, 20389993 - 20390039
Alignment:
Q  570 gggtcttgttaacgagtgctcccggggcactctttaagcatcccaaa 616  Q
    |||||||||||||||||| |||||||||| |||||||| || |||||    
T  20389993 gggtcttgttaacgagtgttcccggggcattctttaagaattccaaa 20390039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 570 - 608
Target Start/End: Complemental strand, 38945158 - 38945120
Alignment:
Q  570 gggtcttgttaacgagtgctcccggggcactctttaagc 608  Q
    ||||||||||||||||||| |||| ||||||||||||||    
T  38945158 gggtcttgttaacgagtgcccccgcggcactctttaagc 38945120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 573 - 671
Target Start/End: Original strand, 39274933 - 39275030
Alignment:
Q  573 tcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaata 671  Q
    |||| ||||||||||| ||||||||||| ||||||||| | ||| | |  ||||||| ||| ||||| |||| |||| |||||| ||||||||| ||||    
T  39274933 tcttattaacgagtgc-cccggggcactatttaagcattcaaaagtaaacaattatttttttaaaaaatcaaatatttcaatttccaatgcattgaata 39275030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 569 - 606
Target Start/End: Complemental strand, 6316945 - 6316908
Alignment:
Q  569 agggtcttgttaacgagtgctcccggggcactctttaa 606  Q
    ||||||||||||||||||||  ||||||||||||||||    
T  6316945 agggtcttgttaacgagtgcctccggggcactctttaa 6316908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 570 - 607
Target Start/End: Complemental strand, 44646663 - 44646626
Alignment:
Q  570 gggtcttgttaacgagtgctcccggggcactctttaag 607  Q
    ||||||||||||||||||| ||||||||| ||||||||    
T  44646663 gggtcttgttaacgagtgcccccggggcattctttaag 44646626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 563 - 604
Target Start/End: Original strand, 50115016 - 50115057
Alignment:
Q  563 ttttatagggtcttgttaacgagtgctcccggggcactcttt 604  Q
    ||||| ||||||||||||||||||||  ||||||||||||||    
T  50115016 ttttaaagggtcttgttaacgagtgcctccggggcactcttt 50115057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 95; Significance: 4e-46; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 571 - 721
Target Start/End: Complemental strand, 30501277 - 30501127
Alignment:
Q  571 ggtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaat 670  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||||| |||||||| ||| |||||||||| ||||||||||| |||| |||| |||    
T  30501277 ggtcttgttaacgagtgcccccagggcactctttaagcatcccaaatttagtaattattcttttaaaaagtcaattattacaatttccaatacattcaat 30501178  T
Q  671 acacaacttttcattaaaaacttaccatttaaagtacttaaatagtgcccc 721  Q
    ||||||||||||||| ||||||||| ||||||||| |||||  ||||||||    
T  30501177 acacaacttttcatttaaaacttactatttaaagtgcttaacaagtgcccc 30501127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 571 - 721
Target Start/End: Complemental strand, 30541620 - 30541470
Alignment:
Q  571 ggtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaat 670  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||||| |||||||| ||| |||||||||| ||||||||||| |||| |||| |||    
T  30541620 ggtcttgttaacgagtgcccccagggcactctttaagcatcccaaatttagtaattattcttttaaaaagtcaattattacaatttccaatacattcaat 30541521  T
Q  671 acacaacttttcattaaaaacttaccatttaaagtacttaaatagtgcccc 721  Q
    ||||||||||||||| ||||||||| ||||||||| |||||  ||||||||    
T  30541520 acacaacttttcatttaaaacttactatttaaagtgcttaacaagtgcccc 30541470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 569 - 718
Target Start/End: Original strand, 30104771 - 30104920
Alignment:
Q  569 agggtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcattta 668  Q
    ||||| |||||||| ||||| | ||||||||||||||||||||||||||||| ||| |||| ||| ||||||||||| |||||||||| ||||||||| |    
T  30104771 agggtattgttaacaagtgccctcggggcactctttaagcatcccaaatttagtaactatttttttaaaaagtcaacaattacaatttccaatgcattca 30104870  T
Q  669 atacacaacttttcattaaaaacttaccatttaaagtacttaaatagtgc 718  Q
    ||||||||||||||||||||||||||||| |||||||  ||||| |||||    
T  30104871 atacacaacttttcattaaaaacttaccacttaaagtgtttaaagagtgc 30104920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 570 - 717
Target Start/End: Complemental strand, 16667430 - 16667283
Alignment:
Q  570 gggtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaa 669  Q
    ||||||| |||| ||||||  ||||||||||||||||||||| |||||||| |||||||| ||| |||||||||| ||||||||||| |||| |||| ||    
T  16667430 gggtctttttaaagagtgcctccggggcactctttaagcatcacaaatttaataattattcttttaaaaagtcaattattacaatttccaatacattcaa 16667331  T
Q  670 tacacaacttttcattaaaaacttaccatttaaagtacttaaatagtg 717  Q
    ||||||| |||||||||||||||||| ||||||||| |||||| ||||    
T  16667330 tacacaatttttcattaaaaacttactatttaaagtgcttaaaaagtg 16667283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 564 - 717
Target Start/End: Original strand, 7719166 - 7719319
Alignment:
Q  564 tttatagggtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgc 663  Q
    ||||||||||||| ||||||||||| |||||| |||||||||||||| ||| |||||  ||||||| ||| ||||| |||||||||||||||| ||||      
T  7719166 tttatagggtctttttaacgagtgcccccgggacactctttaagcataccatatttaaaaattattcttttaaaaaatcaactattacaatttccaatat 7719265  T
Q  664 atttaatacacaacttttcattaaaaacttaccatttaaagtacttaaatagtg 717  Q
    ||| |||||||||||||||||||||||||||  ||||||||| |||||| ||||    
T  7719266 attcaatacacaacttttcattaaaaacttattatttaaagtgcttaaaaagtg 7719319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 569 - 717
Target Start/End: Complemental strand, 18229740 - 18229593
Alignment:
Q  569 agggtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcattta 668  Q
    |||||||||||||||||||| |||  |  ||||||||||||||||||||||| |||||||| ||| ||||||| |||||||||||||| |||| |||| |    
T  18229740 agggtcttgttaacgagtgcccccaagt-actctttaagcatcccaaatttagtaattattcttttaaaaagttaactattacaatttccaatacattca 18229642  T
Q  669 atacacaacttttcattaaaaacttaccatttaaagtacttaaatagtg 717  Q
    ||| |||| |||||||||||||||||||||||||||| |||||| ||||    
T  18229641 ataaacaatttttcattaaaaacttaccatttaaagtgcttaaagagtg 18229593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 569 - 720
Target Start/End: Complemental strand, 2918736 - 2918584
Alignment:
Q  569 agggtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcattta 668  Q
    ||||| ||||||||||||||    |||| |||||||||||||  |||||||| |||||||| |||||||| ||||||||||| ||||| |||||||||||    
T  2918736 agggttttgttaacgagtgcctttggggtactctttaagcatttcaaatttaataattattttttaaaaatgtcaactattataatttccaatgcattta 2918637  T
Q  669 atacacaacttttcattaaaaa-cttaccatttaaagtacttaaatagtgccc 720  Q
    ||||||||||||||||||||||  |||| ||||||| | |||||| |||||||    
T  2918636 atacacaacttttcattaaaaattttacaatttaaaatgcttaaagagtgccc 2918584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 568 - 712
Target Start/End: Complemental strand, 9276719 - 9276576
Alignment:
Q  568 tagggtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcattt 667  Q
    |||||||||||||||||||| ||   ||| | |||| |||||||||||||||| |||||||| ||| ||||| |||||||||| ||||| |||||||||     
T  9276719 tagggtcttgttaacgagtg-tcttcgggtattcttcaagcatcccaaatttagtaattatttttttaaaaaatcaactattataattttcaatgcattc 9276621  T
Q  668 aatacacaacttttcattaaaaacttaccatttaaagtacttaaa 712  Q
    |||||| ||||||||||||||||||||| ||||||||| ||||||    
T  9276620 aatacataacttttcattaaaaacttactatttaaagtgcttaaa 9276576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 569 - 712
Target Start/End: Original strand, 17692231 - 17692372
Alignment:
Q  569 agggtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcattta 668  Q
    ||||||||||||||| |||| |||||| |||| ||||||||||| ||||||| |||||||| | | |||||||||||| ||||||||| ||||||| |||    
T  17692231 agggtcttgttaacgggtgcccccggg-cact-tttaagcatcctaaatttagtaattattctcttaaaaagtcaactgttacaattttcaatgcaatta 17692328  T
Q  669 atacacaacttttcattaaaaacttaccatttaaagtacttaaa 712  Q
     |||||||||||||||||||||| ||| |||| |||| ||||||    
T  17692329 ctacacaacttttcattaaaaacctactattttaagtgcttaaa 17692372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 572 - 705
Target Start/End: Original strand, 15720037 - 15720170
Alignment:
Q  572 gtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaata 671  Q
    |||||||||||||||| | |||  |||||||| |||||| |||||||||  ||||||| ||| |||||||||||||||||||||| ||||| | ||||||    
T  15720037 gtcttgttaacgagtgtttccgaagcactcttcaagcataccaaatttatcaattattcttttaaaaagtcaactattacaatttccaatgaacttaata 15720136  T
Q  672 cacaacttttcattaaaaacttaccatttaaagt 705  Q
    ||||||||||||| || ||||||| | |||||||    
T  15720137 cacaacttttcataaagaacttactaattaaagt 15720170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 597 - 720
Target Start/End: Complemental strand, 34899247 - 34899124
Alignment:
Q  597 cactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaatacacaacttttcattaaaaacttacc 696  Q
    ||||||||||||||||||||| || |||||||| ||| |||||| ||| |||||||||||  ||||||||||||| | ||||||||||| |||||||||     
T  34899247 cactctttaagcatcccaaatatagtaattattcttttaaaaagacaattattacaatttctaatgcatttaatatataacttttcatttaaaacttact 34899148  T
Q  697 atttaaagtacttaaatagtgccc 720  Q
    |||||||||  ||||| |||||||    
T  34899147 atttaaagtgtttaaagagtgccc 34899124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 572 - 717
Target Start/End: Complemental strand, 112622 - 112477
Alignment:
Q  572 gtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaata 671  Q
    ||||||||||||||||    ||||||||||||||||||||  ||| ||| |||||||| |||  |||||||||||  |||||||| ||||| ||||||||    
T  112622 gtcttgttaacgagtgtcatcggggcactctttaagcatcataaaattagtaattattcttttgaaaagtcaactgatacaattttcaatgtatttaata 112523  T
Q  672 cacaacttttcattaaaaacttaccatttaaagtacttaaatagtg 717  Q
    ||||| ||||||||||||| ||   ||||||||| |||||| ||||    
T  112522 cacaatttttcattaaaaatttgttatttaaagtgcttaaagagtg 112477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 575 - 712
Target Start/End: Original strand, 8221096 - 8221232
Alignment:
Q  575 ttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaatacac 674  Q
    |||||||| |||||||||||  |||||||||| ||| | |||||||  ||||||| | | ||||||||||||||||||| || ||||||||| |||||||    
T  8221096 ttgttaacaagtgctcccggaacactctttaa-cattctaaatttagcaattattctcttaaaaagtcaactattacaactttcaatgcattcaatacac 8221194  T
Q  675 aacttttcattaaaaacttaccatttaaagtacttaaa 712  Q
    || |||| ||||||||||||| ||||||| | ||||||    
T  8221195 aattttttattaaaaacttactatttaaaatgcttaaa 8221232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 569 - 689
Target Start/End: Original strand, 41583510 - 41583630
Alignment:
Q  569 agggtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcattta 668  Q
    |||||||||||||||||||| |||||| ||||||||||| ||||||||||||  |||||||  || ||||||| || |||||||| || ||||||||| |    
T  41583510 agggtcttgttaacgagtgcccccgggtcactctttaaggatcccaaatttagaaattattccttcaaaaagttaaatattacaaattccaatgcattga 41583609  T
Q  669 atacacaacttttcattaaaa 689  Q
    |||||||  ||||||| ||||    
T  41583610 atacacagattttcataaaaa 41583630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 569 - 703
Target Start/End: Complemental strand, 39558905 - 39558772
Alignment:
Q  569 agggtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcattta 668  Q
    |||| |||||||| |||||| |||||  ||||||||||| || ||| ||||| ||||||||  || ||||| |||||| ||||||||| ||||||||||     
T  39558905 agggacttgttaaagagtgcccccgga-cactctttaagtattccatatttagtaattattcatttaaaaattcaactgttacaatttccaatgcatttg 39558807  T
Q  669 atacacaacttttcattaaaaacttaccatttaaa 703  Q
    |||||| |||||||| ||||||||||| |||||||    
T  39558806 atacacgacttttcaataaaaacttactatttaaa 39558772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 600 - 705
Target Start/End: Original strand, 3140812 - 3140917
Alignment:
Q  600 tctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaatacacaacttttcattaaaaacttaccatt 699  Q
    ||||||| ||||  ||||||| |||||||| ||| |||||||||||||||||||||| |||| ||||||||| ||||||||| ||| ||||||||  |||    
T  3140812 tctttaaacatcataaatttaataattattcttttaaaaagtcaactattacaattttcaattcatttaatatacaactttttatttaaaacttattatt 3140911  T
Q  700 taaagt 705  Q
    ||||||    
T  3140912 taaagt 3140917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 658 - 721
Target Start/End: Original strand, 7968446 - 7968509
Alignment:
Q  658 caatgcatttaatacacaacttttcattaaaaacttaccatttaaagtacttaaatagtgcccc 721  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||| |||||| ||||||||    
T  7968446 caatgcatttaatacacaacttttcattaaaaacttactatttaaagtgcttaaagagtgcccc 7968509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 597 - 695
Target Start/End: Complemental strand, 40530546 - 40530448
Alignment:
Q  597 cactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaatacacaacttttcattaaaaacttac 695  Q
    |||||||||| |||| || ||||| |||||||||||| ||||||| |||||| |||||||  ||| |||| ||||||||||| ||||||||||||||||    
T  40530546 cactctttaaacatctcatatttagtaattattattttaaaaagttaactatcacaatttctaattcattcaatacacaactattcattaaaaacttac 40530448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 569 - 712
Target Start/End: Original strand, 41047953 - 41048096
Alignment:
Q  569 agggtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcattta 668  Q
    |||||||||||||||| || || |  | |||||||||||||||  |||||||  ||||||| ||| |||| || || ||||| ||||| ||||||||| |    
T  41047953 agggtcttgttaacgaatgttcgcatgacactctttaagcatcataaatttagcaattatttttttaaaaggttaattattataatttccaatgcattaa 41048052  T
Q  669 atacacaacttttcattaaaaacttaccatttaaagtacttaaa 712  Q
    || ||||  |||||||||||||||  |||||| |||||||||||    
T  41048053 atgcacactttttcattaaaaactacccattttaagtacttaaa 41048096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 570 - 702
Target Start/End: Original strand, 8208147 - 8208279
Alignment:
Q  570 gggtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaa 669  Q
    |||||||||||||||||| |  | | |||||||||||||||   ||||||   ||||||| ||| |||||||||| |||||||||||  |||||||| |     
T  8208147 gggtcttgttaacgagtgttttcagagcactctttaagcattttaaatttgaaaattattcttttaaaaagtcaattattacaatttttaatgcattcat 8208246  T
Q  670 tacacaacttttcattaaaaacttaccatttaa 702  Q
    |||| ||||||||||  |||||||| |||||||    
T  8208247 tacataacttttcatataaaacttatcatttaa 8208279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 570 - 705
Target Start/End: Original strand, 13479987 - 13480122
Alignment:
Q  570 gggtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattattt-aaaaaagtcaactattacaatttacaatgcattta 668  Q
    |||| |||||||||||||| |||  | ||||||||||||||  |||||||| |||||||| ||| |||||| | |||||||| ||||| ||||||||| |    
T  13479987 gggttttgttaacgagtgcccccaag-cactctttaagcatttcaaatttagtaattattttttaaaaaaaattaactattataattttcaatgcattca 13480085  T
Q  669 atacacaacttttcattaaaaacttaccatttaaagt 705  Q
    ||||||||  ||| |||||||| |||  |||||||||    
T  13480086 atacacaatattttattaaaaatttattatttaaagt 13480122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 572 - 703
Target Start/End: Complemental strand, 23117362 - 23117232
Alignment:
Q  572 gtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaata 671  Q
    |||||||||||||||||   ||||| | |||||||||||   |||||||  | ||||| |||  ||| || ||| |||||||||| |||| |||||||||    
T  23117362 gtcttgttaacgagtgcattcggggtaatctttaagcattttaaatttagcagttattctttttaaa-gttaacaattacaatttccaatacatttaata 23117264  T
Q  672 cacaacttttcattaaaaacttaccatttaaa 703  Q
    || || |||||||||||||||||| |||||||    
T  23117263 cataatttttcattaaaaacttactatttaaa 23117232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 571 - 649
Target Start/End: Complemental strand, 17098323 - 17098245
Alignment:
Q  571 ggtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactatt 649  Q
    |||||||||||||||||   |||||||||||||||| |||| |||| | |  |||||||||||||||||||||| ||||    
T  17098323 ggtcttgttaacgagtgtcgccggggcactctttaaacatcacaaaataagcaattattatttaaaaaagtcaaatatt 17098245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 602 - 703
Target Start/End: Original strand, 18963812 - 18963914
Alignment:
Q  602 tttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaatacacaacttttcattaaaaactt-accattt 700  Q
    |||||| ||| | |||||| |||||||| || | |||||| |||||||||||||| ||||||||| ||||||||| |||| || ||||| || |||||||    
T  18963812 tttaagaatctcgaatttagtaattattcttgagaaaagttaactattacaattttcaatgcattaaatacacaattttttataaaaaaattaaccattt 18963911  T
Q  701 aaa 703  Q
    |||    
T  18963912 aaa 18963914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 572 - 702
Target Start/End: Complemental strand, 24041158 - 24041030
Alignment:
Q  572 gtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaata 671  Q
    |||||||||||||||||| |||||| |||||||||||||  ||||||    ||||||| ||||||||| |||| || |  ||||| |||| |||| ||||    
T  24041158 gtcttgttaacgagtgct-ccggggtactctttaagcatatcaaattatgaaattattctttaaaaaattcaaatagtttaatttccaatacattaaata 24041060  T
Q  672 cacaacttttcattaaaaacttaccatttaa 702  Q
    || ||||||||| |||||| |||| ||||||    
T  24041059 cataacttttca-taaaaagttactatttaa 24041030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 568 - 689
Target Start/End: Complemental strand, 25438015 - 25437893
Alignment:
Q  568 tagggtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattattt-aaaaaagtcaactattacaatttacaatgcatt 666  Q
    ||||||||||||||||||||| |||||| |||||||||||||| | ||||| |  | ||||| ||| |||||||| ||  | | |||||| ||||| |||    
T  25438015 tagggtcttgttaacgagtgcccccgggacactctttaagcatgctaaattaagaagttattctttaaaaaaagtgaaacagttcaatttccaatgtatt 25437916  T
Q  667 taatacacaacttttcattaaaa 689  Q
     ||||||||| ||||||| ||||    
T  25437915 aaatacacaagttttcataaaaa 25437893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 570 - 616
Target Start/End: Original strand, 31672379 - 31672425
Alignment:
Q  570 gggtcttgttaacgagtgctcccggggcactctttaagcatcccaaa 616  Q
    ||||||||||||||||||| ||||||||||||||||||||| |||||    
T  31672379 gggtcttgttaacgagtgcccccggggcactctttaagcattccaaa 31672425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 569 - 610
Target Start/End: Original strand, 23023600 - 23023641
Alignment:
Q  569 agggtcttgttaacgagtgctcccggggcactctttaagcat 610  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  23023600 agggtcttgttaacgagtgcccccggggcactctttaagcat 23023641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 569 - 649
Target Start/End: Complemental strand, 25416003 - 25415923
Alignment:
Q  569 agggtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactatt 649  Q
    ||||||||||||||||||||| |||| ||||||||||| |||   ||| ||| |||||||  |||||||||||||| ||||    
T  25416003 agggtcttgttaacgagtgctaccggcgcactctttaaacattttaaaattagtaattatactttaaaaaagtcaaatatt 25415923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 569 - 656
Target Start/End: Complemental strand, 34032229 - 34032142
Alignment:
Q  569 agggtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaattt 656  Q
    |||||||||||||||||||  |  |||||||||||||||||| | ||| | | |||||||| ||||||||||| || |||| ||||||    
T  34032229 agggtcttgttaacgagtgtccttggggcactctttaagcattctaaaataagtaattattctttaaaaaagttaaatatttcaattt 34032142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 572 - 638
Target Start/End: Original strand, 779056 - 779122
Alignment:
Q  572 gtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaa 638  Q
    ||||||||||||||||| ||| ||||||||||||| ||| | ||| ||| |||||||| ||||||||    
T  779056 gtcttgttaacgagtgccccctgggcactctttaaacattcaaaaattagtaattattttttaaaaa 779122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 580 - 666
Target Start/End: Complemental strand, 2827692 - 2827606
Alignment:
Q  580 aacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatt 666  Q
    ||||||||  |||||||||||||||||  || |||||||||  || |||||||||| |||||||| | |||||| || |||||||||    
T  2827692 aacgagtgtccccggggcactctttaaagattccaaatttagaaaatattatttaagaaagtcaaatgttacaagtttcaatgcatt 2827606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 577 - 675
Target Start/End: Original strand, 16161394 - 16161492
Alignment:
Q  577 gttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaatacaca 675  Q
    ||||||||||| | |||||||||||||||||||| |||||||    ||||||| || |||||||| || || | |||||| ||||| ||| ||||||||    
T  16161394 gttaacgagtgtttccggggcactctttaagcattccaaattaggaaattatttttaaaaaaagttaaataattcaattttcaatggattaaatacaca 16161492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 571 - 656
Target Start/End: Original strand, 2816147 - 2816232
Alignment:
Q  571 ggtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaattt 656  Q
    ||||||||||||||||||| |||||| |||||||||||||  ||||   |  ||||||| ||||||||| |||| |||| ||||||    
T  2816147 ggtcttgttaacgagtgctaccggggtactctttaagcatttcaaaagaagcaattattctttaaaaaaatcaaatatttcaattt 2816232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 597 - 722
Target Start/End: Complemental strand, 5815182 - 5815057
Alignment:
Q  597 cactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaatacacaacttttcattaaaaacttacc 696  Q
    ||||||||||||| |  ||||||| ||||||||  || ||||| | |||||  ||||||| |||| |||| || | ||| |||||||||||||||||||     
T  5815182 cactctttaagcaccttaaatttagtaattattcatttaaaaatttaactaccacaatttccaatacattcaacatacatcttttcattaaaaacttact 5815083  T
Q  697 atttaaagtacttaaatagtgcccca 722  Q
      || |||| |||||| |||||||||    
T  5815082 gctttaagtgcttaaagagtgcccca 5815057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 570 - 606
Target Start/End: Original strand, 10410418 - 10410454
Alignment:
Q  570 gggtcttgttaacgagtgctcccggggcactctttaa 606  Q
    ||||||||||||||||||| |||||||||||||||||    
T  10410418 gggtcttgttaacgagtgcccccggggcactctttaa 10410454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 572 - 607
Target Start/End: Original strand, 3263717 - 3263752
Alignment:
Q  572 gtcttgttaacgagtgctcccggggcactctttaag 607  Q
    |||||||||||||||||| |||||||||||||||||    
T  3263717 gtcttgttaacgagtgcttccggggcactctttaag 3263752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 668 - 721
Target Start/End: Original strand, 5758628 - 5758680
Alignment:
Q  668 aatacacaacttttcattaaaaacttaccatttaaagtacttaaatagtgcccc 721  Q
    |||||||||  |||||| |||||||||||||||||||| |||||| ||||||||    
T  5758628 aatacacaaactttcat-aaaaacttaccatttaaagtccttaaaaagtgcccc 5758680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 573 - 610
Target Start/End: Complemental strand, 9330446 - 9330409
Alignment:
Q  573 tcttgttaacgagtgctcccggggcactctttaagcat 610  Q
    |||||||||||||||  |||||||||||||||||||||    
T  9330446 tcttgttaacgagtgtccccggggcactctttaagcat 9330409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 635 - 712
Target Start/End: Original strand, 14043414 - 14043491
Alignment:
Q  635 aaaaagtcaactattacaatttacaatgcatttaatacacaacttttcattaaaaacttaccatttaaagtacttaaa 712  Q
    |||||||||||||| ||||||| || | |||||||||||||| |||| ||  ||||||||  ||||||| | ||||||    
T  14043414 aaaaagtcaactatcacaattttcattacatttaatacacaattttttatataaaacttaatatttaaaatgcttaaa 14043491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 567 - 616
Target Start/End: Original strand, 28793300 - 28793349
Alignment:
Q  567 atagggtcttgttaacgagtgctcccggggcactctttaagcatcccaaa 616  Q
    ||||||||||||||||||||||| |||| || ||||||||| || |||||    
T  28793300 atagggtcttgttaacgagtgcttccggtgcgctctttaaggattccaaa 28793349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 95; Significance: 4e-46; HSPs: 54)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 570 - 720
Target Start/End: Original strand, 39150550 - 39150700
Alignment:
Q  570 gggtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaa 669  Q
    ||||||||||||||||||| ||||||||||||||||||||||| ||||||| |||||||| ||  |||||||||||||||||||||||||||||||| ||    
T  39150550 gggtcttgttaacgagtgcccccggggcactctttaagcatcctaaatttagtaattattcttgtaaaaagtcaactattacaatttacaatgcattcaa 39150649  T
Q  670 tacacaacttttcattaaaaacttaccatttaaagtacttaaatagtgccc 720  Q
    |||| || |||||||||||| ||||| | ||||||| |||||| |||||||    
T  39150650 tacataaattttcattaaaatcttactagttaaagtgcttaaagagtgccc 39150700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 569 - 718
Target Start/End: Original strand, 2864110 - 2864258
Alignment:
Q  569 agggtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcattta 668  Q
    |||||||||||||||||||  |||||| |||||||||| ||||||| |||||  ||||||| ||||||| |||||||||||||||||| ||||||||| |    
T  2864110 agggtcttgttaacgagtgtccccgggacactctttaaacatcccatatttaggaattattctttaaaa-agtcaactattacaatttccaatgcattca 2864208  T
Q  669 atacacaacttttcattaaaaacttaccatttaaagtacttaaatagtgc 718  Q
    ||||||||||||||||||||||||||| ||||||||| |||||| |||||    
T  2864209 atacacaacttttcattaaaaacttactatttaaagtgcttaaagagtgc 2864258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 575 - 705
Target Start/End: Complemental strand, 43397150 - 43397018
Alignment:
Q  575 ttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattat-tattta-aaaaagtcaactattacaatttacaatgcatttaatac 672  Q
    ||||||||||||| | ||| |||||||||||||||||| ||||||| ||||||| |||||  |||||||||||||||| ||||| |||||||||||||||    
T  43397150 ttgttaacgagtgattccgaggcactctttaagcatcctaaatttagtaattatatatttttaaaaagtcaactattataatttccaatgcatttaatac 43397051  T
Q  673 acaacttttcattaaaaacttaccatttaaagt 705  Q
    ||||||||||||||||||||||| |||||||||    
T  43397050 acaacttttcattaaaaacttactatttaaagt 43397018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 586 - 690
Target Start/End: Original strand, 38491205 - 38491309
Alignment:
Q  586 tgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaatacacaacttttcatt 685  Q
    ||||| ||||||||||||| || |||||||||||| |||||||||| | |||||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  38491205 tgctctcggggcactctttcagaatcccaaatttagtaattattatgttaaaaagtcaactattacaatttacaatgcattcaatacacaatttttcatt 38491304  T
Q  686 aaaaa 690  Q
    |||||    
T  38491305 aaaaa 38491309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 568 - 703
Target Start/End: Complemental strand, 48022493 - 48022358
Alignment:
Q  568 tagggtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcattt 667  Q
    ||||||||||||||||||||| || | || ||||||||||||||||| ||||| |||||||| ||| ||||||| ||||||| |||||| |||||||||     
T  48022493 tagggtcttgttaacgagtgcccctgtggtactctttaagcatcccatatttagtaattattgttttaaaaagttaactattgcaattttcaatgcattc 48022394  T
Q  668 aatacacaacttttcattaaaaacttaccatttaaa 703  Q
    |||||| |  |||| ||||||||||||| |||||||    
T  48022393 aatacatatttttttattaaaaacttactatttaaa 48022358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 570 - 680
Target Start/End: Complemental strand, 34232845 - 34232735
Alignment:
Q  570 gggtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaa 669  Q
    ||||||||||||||||||||| |||| ||||||||||||||||  ||||||  ||||||| ||| |||||||||||||||||||||| |||||| || ||    
T  34232845 gggtcttgttaacgagtgctcacgggacactctttaagcatccttaatttagcaattattcttttaaaaagtcaactattacaattttcaatgctttcaa 34232746  T
Q  670 tacacaacttt 680  Q
    |||||||||||    
T  34232745 tacacaacttt 34232735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 564 - 718
Target Start/End: Original strand, 39156223 - 39156381
Alignment:
Q  564 tttatagggtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgc 663  Q
    |||| |||||||||||||||||||| || | | |||||||||||||||  ||||||| |||||||| ||| ||||||||||||| |||||||| ||||||    
T  39156223 tttaaagggtcttgttaacgagtgcccctgagacactctttaagcatcaaaaatttagtaattattcttttaaaaagtcaactactacaatttccaatgc 39156322  T
Q  664 atttaatacacaa----cttttcattaaaaacttaccatttaaagtacttaaatagtgc 718  Q
    ||| |||||||||     |||| |||||||| ||||||||||||||  ||||| |||||    
T  39156323 attcaatacacaattttttttttattaaaaatttaccatttaaagtgtttaaaaagtgc 39156381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 597 - 705
Target Start/End: Complemental strand, 47187932 - 47187824
Alignment:
Q  597 cactctttaagcatcccaaatttactaattatt-atttaaaaaagtcaactattacaatttacaatgcatttaatacacaacttttcattaaaaacttac 695  Q
    |||||||||||||||||||||||| |||||||| |||||||||| |||||||||| ||||| ||||||||| |||||| || ||||||||||||||||||    
T  47187932 cactctttaagcatcccaaatttagtaattattcatttaaaaaa-tcaactattataatttccaatgcattcaatacataatttttcattaaaaacttac 47187834  T
Q  696 catttaaagt 705  Q
    ||||| ||||    
T  47187833 cattttaagt 47187824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 602 - 717
Target Start/End: Original strand, 44829272 - 44829386
Alignment:
Q  602 tttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaatacacaacttttcattaaaaacttaccattta 701  Q
    ||||||||||||||||||| |||||||| |||||||| |||||||||||||||||  ||| |||| |||||||||||||| ||| ||||||||||  |||    
T  44829272 tttaagcatcccaaatttagtaattattctttaaaaaggtcaactattacaatttttaatacattcaatacacaactttttatt-aaaacttaccgatta 44829370  T
Q  702 aagtacttaaatagtg 717  Q
    ||||||||||| ||||    
T  44829371 aagtacttaaagagtg 44829386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 570 - 714
Target Start/End: Complemental strand, 39914743 - 39914602
Alignment:
Q  570 gggtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaa 669  Q
    |||||||||||||||||||| ||||| |||||||||||||| |||||||||  |||| || ||| |||||||||||||||||||||| ||||||| | ||    
T  39914743 gggtcttgttaacgagtgcttccgggacactctttaagcataccaaatttaacaattgttcttttaaaaagtcaactattacaattttcaatgcactcaa 39914644  T
Q  670 tacacaacttttcattaaaaacttaccatttaaagtacttaaata 714  Q
    |||   |||||| || |||||| ||| | ||||||| ||||||||    
T  39914643 tac---acttttaataaaaaacctactaattaaagtgcttaaata 39914602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 598 - 719
Target Start/End: Complemental strand, 38748831 - 38748710
Alignment:
Q  598 actctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaatacacaacttttcattaaaaacttacca 697  Q
    ||||||||||||| |||||||||  ||||||| ||| |||||||||||||||| ||||| ||||||| | ||||||||||||||||| || ||||||| |    
T  38748831 actctttaagcataccaaatttagaaattattcttttaaaaagtcaactattataattttcaatgcactcaatacacaacttttcataaataacttacta 38748732  T
Q  698 tttaaagtacttaaatagtgcc 719  Q
     ||||||| |||||| ||||||    
T  38748731 attaaagtgcttaaagagtgcc 38748710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 567 - 712
Target Start/End: Complemental strand, 4851385 - 4851241
Alignment:
Q  567 atagggtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatt 666  Q
    |||| |||||||||||||||||  ||||| ||||||||||||||  ||| ||||  ||||||| |||||||| |||||||||||||||||  |||||| |    
T  4851385 atagagtcttgttaacgagtgcctccgggacactctttaagcatgtcaattttaaaaattattctttaaaaa-gtcaactattacaatttcaaatgcact 4851287  T
Q  667 taatacacaacttttcattaaaaacttaccatttaaagtacttaaa 712  Q
    || ||| ||||||||||| || ||||||| | ||||||| ||||||    
T  4851286 tactacccaacttttcataaagaacttactaattaaagtgcttaaa 4851241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 569 - 705
Target Start/End: Complemental strand, 32562491 - 32562357
Alignment:
Q  569 agggtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcattta 668  Q
    |||||||||||||| ||||| || | | ||||||||||| |||  ||||||| |||||||||||| ||||| |||||||||||||||| ||||||| | |    
T  32562491 agggtcttgttaacaagtgcacc-gagacactctttaagaatctaaaatttagtaattattattttaaaaattcaactattacaattttcaatgcagtga 32562393  T
Q  669 atacacaacttttcattaaaaacttaccatttaaagt 705  Q
    |||||||| |||| | ||||||||||| |||||||||    
T  32562392 atacacaatttttta-taaaaacttactatttaaagt 32562357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 570 - 722
Target Start/End: Original strand, 48947172 - 48947323
Alignment:
Q  570 gggtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaa 669  Q
    |||| |||||||||||||| || |||||| ||||||||||| | ||||| | |||||||| |||||||| |||||   || |||||| ||||||| | |     
T  48947172 gggttttgttaacgagtgcccctggggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgat 48947271  T
Q  670 tacacaacttttcattaaaaacttaccatttaaagtacttaaatagtgcccca 722  Q
    ||||||| |||||| |||||| |||||||||||||| ||||| ||||||||||    
T  48947272 tacacaaattttca-taaaaagttaccatttaaagtccttaactagtgcccca 48947323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 568 - 705
Target Start/End: Complemental strand, 40460863 - 40460726
Alignment:
Q  568 tagggtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattatt-atttaaaaaagtcaactattacaatttacaatgcatt 666  Q
    ||||||||| |||||||||||  ||| |  ||||||||||||||| ||||||| |||||||| |||||||||| |||| ||||||| ||| ||||  |||    
T  40460863 tagggtctttttaacgagtgcctccgagatactctttaagcatccaaaatttaataattattcatttaaaaaa-tcaattattacagtttccaatttatt 40460765  T
Q  667 taatacacaacttttcattaaaaacttaccatttaaagt 705  Q
     |||| |||| |||||||||||||||||| |||||||||    
T  40460764 caatatacaatttttcattaaaaacttactatttaaagt 40460726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 569 - 705
Target Start/End: Complemental strand, 2995109 - 2994975
Alignment:
Q  569 agggtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcattta 668  Q
    |||||||||||||| ||||| || ||| ||||||||||| |||| ||||||| |||||||||||| ||||||| |||||||| ||||| ||||    | |    
T  2995109 agggtcttgttaacaagtgcacc-gggacactctttaagaatccaaaatttagtaattattattttaaaaagtaaactattataattttcaattttgtaa 2995011  T
Q  669 atacacaacttttcattaaaaacttaccatttaaagt 705  Q
    ||||||||||||| | ||||||||||| |||||||||    
T  2995010 atacacaacttttta-taaaaacttactatttaaagt 2994975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 595 - 702
Target Start/End: Original strand, 8365496 - 8365603
Alignment:
Q  595 ggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaatacacaacttttcattaaaaactta 694  Q
    |||||||||||| ||||| ||||||| |||||||| ||| ||||| |||||||||||||| | ||||||||| ||||||  | |||||| ||||||||||    
T  8365496 ggcactctttaaacatcctaaatttaataattattcttttaaaaaatcaactattacaatcttcaatgcattcaatacatcatttttcaataaaaactta 8365595  T
Q  695 ccatttaa 702  Q
    | ||||||    
T  8365596 ctatttaa 8365603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 636 - 718
Target Start/End: Original strand, 31889196 - 31889279
Alignment:
Q  636 aaaagtcaactattacaatttacaatgcatttaatacacaac-ttttcattaaaaacttaccatttaaagtacttaaatagtgc 718  Q
    |||||||||||||||| ||||  ||||||||||||||||||| |||||||||||||||||||||||||| | |||||| |||||    
T  31889196 aaaagtcaactattacgatttctaatgcatttaatacacaactttttcattaaaaacttaccatttaaaatgcttaaagagtgc 31889279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 573 - 712
Target Start/End: Original strand, 8794388 - 8794528
Alignment:
Q  573 tcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaatac 672  Q
    |||||||||| |||| ||| |||  ||||||||||||||| ||||||| |||||||| ||| |||||||||||||||| ||||| ||||||| |  ||||    
T  8794388 tcttgttaacaagtgttcc-gggatactctttaagcatcctaaatttagtaattattcttttaaaaagtcaactattataattttcaatgcactccatac 8794486  T
Q  673 acaacttttcat--taaaaacttaccatttaaagtacttaaa 712  Q
    ||||||||| ||   ||||| |||| | ||||||||||||||    
T  8794487 acaactttttataaaaaaaatttactaattaaagtacttaaa 8794528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 572 - 717
Target Start/End: Original strand, 45640517 - 45640661
Alignment:
Q  572 gtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaata 671  Q
    |||| |||||||||||   ||||| |||| || ||||||||||||||||  || |||| ||| |||||||||| ||||| ||||| ||||||||| | ||    
T  45640517 gtctcgttaacgagtgtctccgggacacttttaaagcatcccaaatttaagaactattctttcaaaaagtcaattattataattttcaatgcattcatta 45640616  T
Q  672 cacaacttttcattaaaaacttaccatttaaagtacttaaatagtg 717  Q
    ||||| ||||||| |||||||||| ||||||| | |||||| ||||    
T  45640617 cacaa-ttttcatcaaaaacttactatttaaaatgcttaaagagtg 45640661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 596 - 712
Target Start/End: Original strand, 17552827 - 17552943
Alignment:
Q  596 gcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaatacacaacttttcattaaaaacttac 695  Q
    |||||||||||  || | ||||||| |||||||| ||| |||||||||||||||| |||||  |||| |||||||| |||| ||||  ||||||||| ||    
T  17552827 gcactctttaactattctaaatttaataattatttttttaaaaagtcaactattataatttttaatgtatttaatatacaattttttgttaaaaactgac 17552926  T
Q  696 catttaaagtacttaaa 712  Q
    | |||||||||||||||    
T  17552927 cttttaaagtacttaaa 17552943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 577 - 718
Target Start/End: Original strand, 3982240 - 3982380
Alignment:
Q  577 gttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaatacacaa 676  Q
    ||||||||||||  ||| | ||||||||||  ||  |||||||| |||||||| ||  |||||||||||||||| |||||| |||||||| |||| ||||    
T  3982240 gttaacgagtgcctccgagacactctttaaaaatatcaaatttagtaattatttttagaaaaagtcaactattataatttataatgcattgaatagacaa 3982339  T
Q  677 cttttcattaaaaacttaccatttaaagtacttaaatagtgc 718  Q
    ||||| | |||||| |||| |||||||||  ||||| |||||    
T  3982340 ctttt-aataaaaatttactatttaaagtgtttaaagagtgc 3982380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 568 - 661
Target Start/End: Complemental strand, 34861352 - 34861259
Alignment:
Q  568 tagggtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaat 661  Q
    ||||||||||||||||||||| || |||||||||||||||||| | ||||| | |||||||| |||||||| |||||  ||| |||||| ||||    
T  34861352 tagggtcttgttaacgagtgccccgggggcactctttaagcattctaaattaagtaattattttttaaaaatgtcaaacatttcaatttccaat 34861259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 573 - 705
Target Start/End: Original strand, 34409705 - 34409836
Alignment:
Q  573 tcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaatac 672  Q
    ||||||||||||||||  ||| |  |||||||||||||   ||||||| ||||| || |||   ||| |||| ||||| ||||| ||||||||| |||||    
T  34409705 tcttgttaacgagtgcgtccgagatactctttaagcattttaaatttagtaattttttttttttaaaatcaattattataatttccaatgcattcaatac 34409804  T
Q  673 acaacttttcattaaaaacttaccatttaaagt 705  Q
    |||  ||||||||||||||||||||||||||||    
T  34409805 acat-ttttcattaaaaacttaccatttaaagt 34409836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 597 - 717
Target Start/End: Complemental strand, 42791253 - 42791133
Alignment:
Q  597 cactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaatacacaacttttcattaaaaacttacc 696  Q
    |||||||||||||||  |||||||  ||||||| ||| |||||||||||||| || ||||  |||||||| |||||||| ||||| ||  |||| ||||     
T  42791253 cactctttaagcatcttaaatttaacaattatttttttaaaaagtcaactatcactattttaaatgcattcaatacacagctttttatataaaatttact 42791154  T
Q  697 atttaaagtacttaaatagtg 717  Q
    ||||||| |||||||| ||||    
T  42791153 atttaaaatacttaaaaagtg 42791133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 570 - 644
Target Start/End: Original strand, 40570657 - 40570732
Alignment:
Q  570 gggtcttgttaacgagtgctcccggggcactctttaagc-atcccaaatttactaattattatttaaaaaagtcaa 644  Q
    ||||||||||||||||||| ||||||||||||||||||| |||| ||| |||  ||||||| ||||||||||||||    
T  40570657 gggtcttgttaacgagtgcccccggggcactctttaagctatccaaaaattagcaattattctttaaaaaagtcaa 40570732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 564 - 666
Target Start/End: Original strand, 3047829 - 3047931
Alignment:
Q  564 tttatagggtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgc 663  Q
    |||| ||||||||||||| |||||| ||||||||||||||||||||| | ||||| | ||||| || |||||||| ||||| | || | |||| ||||||    
T  3047829 tttaaagggtcttgttaaagagtgcccccggggcactctttaagcatgctaaattaagtaattgttctttaaaaatgtcaaatttttcgatttccaatgc 3047928  T
Q  664 att 666  Q
    |||    
T  3047929 att 3047931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 573 - 719
Target Start/End: Complemental strand, 14746334 - 14746189
Alignment:
Q  573 tcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaatac 672  Q
    |||||||||||||||| ||| || ||||||||||| || |||||||||  ||||||| | | ||||| |||||| ||| ||||| ||||||  | |||||    
T  14746334 tcttgttaacgagtgc-ccctggacactctttaagtataccaaatttagcaattattttcttaaaaaatcaactgttataattttcaatgctatgaatac 14746236  T
Q  673 acaacttttcattaaaaacttaccatttaaagtacttaaatagtgcc 719  Q
    ||||||||||||  | ||||||| | ||||||| ||| || ||||||    
T  14746235 acaacttttcatatagaacttactaattaaagtgcttgaagagtgcc 14746189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 572 - 705
Target Start/End: Original strand, 7212745 - 7212871
Alignment:
Q  572 gtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaata 671  Q
    |||||||||||||||| |||||   ||||||||||| ||| |||||||| |||||||  ||| ||||||| ||| |||||||||| |||||||||         
T  7212745 gtcttgttaacgagtg-tcccgat-cactctttaagtatctcaaatttagtaattatacttttaaaaagttaacaattacaatttccaatgcatt----- 7212837  T
Q  672 cacaacttttcattaaaaacttaccatttaaagt 705  Q
    |||||||||| ||| ||||||||| |||||||||    
T  7212838 cacaactttttatttaaaacttacaatttaaagt 7212871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 616 - 705
Target Start/End: Original strand, 44329610 - 44329699
Alignment:
Q  616 atttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaatacacaacttttcattaaaaacttaccatttaaagt 705  Q
    ||||| |||||||| ||| |||||||||||||||| ||||| ||||||||| |||||| || |||| | ||||||||| | |||||||||    
T  44329610 atttaataattattcttttaaaaagtcaactattataattttcaatgcattcaatacataattttttactaaaaactttctatttaaagt 44329699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 600 - 695
Target Start/End: Complemental strand, 604537 - 604444
Alignment:
Q  600 tctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaatacacaacttttcattaaaaacttac 695  Q
    ||||||||||| |||||||||  ||  ||||||| |||||||||| ||||| ||||| ||||||| | ||||||||| |||||||||| |||||||    
T  604537 tctttaagcataccaaatttaacaa--attattttaaaaagtcaattattataatttccaatgcactcaatacacaatttttcattaagaacttac 604444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 561 - 652
Target Start/End: Original strand, 8043841 - 8043930
Alignment:
Q  561 aattttatagggtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattaca 652  Q
    |||||||| |||| ||||||||||||||||||||  |||| ||||||||||| ||||||| |||||||| ||| |||||||| ||| |||||    
T  8043841 aattttat-gggttttgttaacgagtgctcccgga-cactgtttaagcatcctaaatttaataattattcttttaaaaagtcgactgttaca 8043930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 569 - 644
Target Start/End: Complemental strand, 39912349 - 39912274
Alignment:
Q  569 agggtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaa 644  Q
    |||||||||||||||||||| |||||| |||||||||||||| | |||||    | ||||||||||||||||||||    
T  39912349 agggtcttgttaacgagtgcccccgggacactctttaagcatgctaaattaggaagttattatttaaaaaagtcaa 39912274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 569 - 702
Target Start/End: Original strand, 16113886 - 16114020
Alignment:
Q  569 agggtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcattta 668  Q
    ||||||||||||||||||||  |||||||||||||||||||| | | ||| | |||||||| ||| |||| |||||   || |||||| ||||||| | |    
T  16113886 agggtcttgttaacgagtgcctccggggcactctttaagcatactatattaagtaattattttttcaaaatgtcaaagttttcaatttccaatgcactga 16113985  T
Q  669 atacacaacttttcat-taaaaacttaccatttaa 702  Q
     |||||||  ||||||  ||||| |||||||||||    
T  16113986 ttacacaaactttcataaaaaaagttaccatttaa 16114020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 570 - 682
Target Start/End: Complemental strand, 26811369 - 26811258
Alignment:
Q  570 gggtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaa 669  Q
    |||||||||||||||||| |||||||  | ||||||| ||||| | ||||| |||||||| ||| ||||| | |||||||| ||||| |||| |||  ||    
T  26811369 gggtcttgttaacgagtg-tcccgggatattctttaaacatcctatatttagtaattattcttttaaaaaattaactattagaatttccaatacatacaa 26811271  T
Q  670 tacacaacttttc 682  Q
    || ||||||||||    
T  26811270 tatacaacttttc 26811258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 569 - 712
Target Start/End: Complemental strand, 30822913 - 30822772
Alignment:
Q  569 agggtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcattta 668  Q
    ||||||||||||||||||    ||||| |||| |||||| ||  |||||||| |||||||| | | ||||||| || ||||||||||| || |||||| |    
T  30822913 agggtcttgttaacgagtat--ccgggacactttttaaggatttcaaatttagtaattattctcttaaaaagttaattattacaattttcattgcattga 30822816  T
Q  669 atacacaacttttcattaaaaacttaccatttaaagtacttaaa 712  Q
    | |||||| || |   |||||| |||||||||||||| ||||||    
T  30822815 aaacacaatttatttataaaaatttaccatttaaagtgcttaaa 30822772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 595 - 654
Target Start/End: Original strand, 8372988 - 8373047
Alignment:
Q  595 ggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaat 654  Q
    |||||||||||| ||||| ||||||| |||||||| ||| ||||| ||||||||||||||    
T  8372988 ggcactctttaaacatcctaaatttaataattattcttttaaaaaatcaactattacaat 8373047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 567 - 638
Target Start/End: Complemental strand, 31807921 - 31807850
Alignment:
Q  567 atagggtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaa 638  Q
    |||||||||||||||||||||| ||||| ||||| ||||||||| | ||| | | |||||||| ||||||||    
T  31807921 atagggtcttgttaacgagtgcccccggagcactatttaagcattctaaaataagtaattattctttaaaaa 31807850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 635 - 705
Target Start/End: Original strand, 36563737 - 36563805
Alignment:
Q  635 aaaaagtcaactattacaatttacaatgcatttaatacacaacttttcattaaaaacttaccatttaaagt 705  Q
    |||| ||||||||||| ||||| ||||||||| ||||||||| ||||||| ||||||||  ||||||||||    
T  36563737 aaaacgtcaactattataattttcaatgcattaaatacacaatttttcataaaaaactt--catttaaagt 36563805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 622 - 717
Target Start/End: Original strand, 44329484 - 44329579
Alignment:
Q  622 taattattatttaaaaaagtcaactattacaatttacaatgcatttaatacacaacttttcattaaaaacttaccatttaaagtacttaaatagtg 717  Q
    |||||||| ||| |||||||||| ||||| ||||| || ||||||||||| | ||||||| |||||||| ||   ||||||||| |||||| ||||    
T  44329484 taattattcttttaaaaagtcaattattataattttcagtgcatttaatatataactttttattaaaaattttatatttaaagtgcttaaagagtg 44329579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 567 - 617
Target Start/End: Original strand, 4771987 - 4772037
Alignment:
Q  567 atagggtcttgttaacgagtgctcccggggcactctttaagcatcccaaat 617  Q
    ||||||| ||||||||||||||  |||||||||||||||||||| ||||||    
T  4771987 atagggttttgttaacgagtgcctccggggcactctttaagcataccaaat 4772037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 631 - 705
Target Start/End: Complemental strand, 6883205 - 6883131
Alignment:
Q  631 tttaaaaaagtcaactattacaatttacaatgcatttaatacacaacttttcattaaaaacttaccatttaaagt 705  Q
    ||||||||| ||||||||||||||||  |||||||| | |||| ||||||||||  |||| ||| ||||||||||    
T  6883205 tttaaaaaaatcaactattacaatttcaaatgcattcattacataacttttcatataaaatttatcatttaaagt 6883131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 588 - 721
Target Start/End: Complemental strand, 6983110 - 6982979
Alignment:
Q  588 ctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaatacacaacttttcattaa 687  Q
    |||| ||||||||||||||| || ||||||| |  |||||||  |||||| |||||| |||| |||||| |||||||||  ||||| || |||||||  |    
T  6983110 ctccgggggcactctttaagtattccaaattaagaaattattcattaaaagagtcaaatatttcaattttcaatgcattggatacataaattttcat--a 6983013  T
Q  688 aaacttaccatttaaagtacttaaatagtgcccc 721  Q
     |||||||||||| | || |||||| ||| ||||    
T  6983012 taacttaccattttaggttcttaaagagtacccc 6982979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 571 - 615
Target Start/End: Complemental strand, 18114571 - 18114527
Alignment:
Q  571 ggtcttgttaacgagtgctcccggggcactctttaagcatcccaa 615  Q
    |||||||||||||||||| | ||||||||||||||||||| ||||    
T  18114571 ggtcttgttaacgagtgcccgcggggcactctttaagcattccaa 18114527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 570 - 666
Target Start/End: Original strand, 34445637 - 34445733
Alignment:
Q  570 gggtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatt 666  Q
    ||||||||||||||||||| ||||| |||||||||||| || |||||   |  ||||| | | |||||||||||| |||| | |||| |||||||||    
T  34445637 gggtcttgttaacgagtgcccccggagcactctttaaggattccaaaagaagaaattaatttataaaaaagtcaaatatttcgatttccaatgcatt 34445733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 572 - 644
Target Start/End: Original strand, 37705847 - 37705919
Alignment:
Q  572 gtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaa 644  Q
    ||||||||||||||||| ||||| ||||||||||||||| | ||| | | |||||||| |||| |||| ||||    
T  37705847 gtcttgttaacgagtgcccccggagcactctttaagcattcgaaaatgagtaattattttttagaaaactcaa 37705919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 573 - 705
Target Start/End: Original strand, 39973863 - 39973994
Alignment:
Q  573 tcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaatac 672  Q
    |||||||||||||||   |||||||||||||||||||| | ||||| | |||||||| ||| |||| || ||   || |||||| ||||||||| | ||     
T  39973863 tcttgttaacgagtgtctccggggcactctttaagcatgctaaattaagtaattattcttttaaaatgttaaagttttcaattttcaatgcattgattat 39973962  T
Q  673 acaacttttcattaaaaacttaccatttaaagt 705  Q
    ||||  ||||| |||||| ||| ||||||||||    
T  39973963 acaaactttca-taaaaagttatcatttaaagt 39973994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 623 - 702
Target Start/End: Complemental strand, 5423831 - 5423753
Alignment:
Q  623 aattattatttaaaaaagtcaactattacaatttacaatgcatttaatacacaacttttcattaaaaacttaccatttaa 702  Q
    ||||||| ||||||||||| || || | |||||| ||||||||| |||||| || |||||| |||||| |||||||||||    
T  5423831 aattattctttaaaaaagttaaatagttcaattttcaatgcattaaatacataagttttca-taaaaaattaccatttaa 5423753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 569 - 616
Target Start/End: Original strand, 45584506 - 45584553
Alignment:
Q  569 agggtcttgttaacgagtgctcccggggcactctttaagcatcccaaa 616  Q
    |||||||||||||||| ||| |||||||||||||||||| || |||||    
T  45584506 agggtcttgttaacgaatgcccccggggcactctttaaggattccaaa 45584553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 568 - 610
Target Start/End: Original strand, 3506946 - 3506988
Alignment:
Q  568 tagggtcttgttaacgagtgctcccggggcactctttaagcat 610  Q
    |||||||| |||||||||||| | |||||||||||||||||||    
T  3506946 tagggtctcgttaacgagtgcccgcggggcactctttaagcat 3506988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 613 - 687
Target Start/End: Complemental strand, 18433048 - 18432974
Alignment:
Q  613 caaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaatacacaacttttcattaa 687  Q
    |||||||| |||||||| ||| |||| || |||| |||||||||  |||| ||| |||| |||||||||||||||    
T  18433048 caaatttagtaattattcttttaaaatgttaactgttacaatttttaatgtattcaatatacaacttttcattaa 18432974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 632 - 702
Target Start/End: Complemental strand, 22177324 - 22177254
Alignment:
Q  632 ttaaaaaagtcaactattacaatttacaatgcatttaatacacaacttttcattaaaaacttaccatttaa 702  Q
    ||||||||||||| || | |||||| ||||||||| ||||||||| ||||   |||||||||| |||||||    
T  22177324 ttaaaaaagtcaagtacttcaatttccaatgcattgaatacacaatttttttataaaaacttaacatttaa 22177254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 570 - 676
Target Start/End: Original strand, 31042969 - 31043075
Alignment:
Q  570 gggtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaa 669  Q
    ||||||||||||||| ||  |||||  || ||||||||||| | ||||| | |||||||| |||||||| |||||   || |||||| ||||||||| |     
T  31042969 gggtcttgttaacgaatgtccccggcacagtctttaagcattctaaattaagtaattattttttaaaaatgtcaaagttttcaattttcaatgcattgat 31043068  T
Q  670 tacacaa 676  Q
    |||||||    
T  31043069 tacacaa 31043075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 568 - 638
Target Start/End: Complemental strand, 35259186 - 35259116
Alignment:
Q  568 tagggtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaa 638  Q
    |||| |||||||||||||||| | |||||||||||||||| || | ||||| |  ||||||| ||||||||    
T  35259186 taggatcttgttaacgagtgccctcggggcactctttaagtatgctaaattaagaaattattttttaaaaa 35259116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 94; Significance: 2e-45; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 569 - 718
Target Start/End: Complemental strand, 1335023 - 1334874
Alignment:
Q  569 agggtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcattta 668  Q
    ||||||||||||||||||    |||||||||||||||||||||||||||||| |||||||| ||||||||| |||||||||||||||| ||||||||| |    
T  1335023 agggtcttgttaacgagtatctccggggcactctttaagcatcccaaatttaataattattctttaaaaaaatcaactattacaatttccaatgcattca 1334924  T
Q  669 atacacaacttttcattaaaaacttaccatttaaagtacttaaatagtgc 718  Q
    ||| |||| ||||||||||||||||| |||||||||| |||||| |||||    
T  1334923 atatacaatttttcattaaaaacttatcatttaaagtgcttaaagagtgc 1334874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 568 - 712
Target Start/End: Complemental strand, 19890329 - 19890185
Alignment:
Q  568 tagggtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcattt 667  Q
    |||||| ||||||||||||| | |||||| ||| ||||||||||| ||||||| |||||||| ||| |||||||||||||||||||||| ||||||||||    
T  19890329 tagggttttgttaacgagtgtttccggggtactatttaagcatcctaaatttagtaattattcttttaaaaagtcaactattacaatttccaatgcattt 19890230  T
Q  668 aatacacaacttttcattaaaaacttaccatttaaagtacttaaa 712  Q
    |||||||||||||||||||||||||||  |||| |||| ||||||    
T  19890229 aatacacaacttttcattaaaaacttattattttaagtgcttaaa 19890185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 571 - 719
Target Start/End: Original strand, 4762318 - 4762466
Alignment:
Q  571 ggtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaat 670  Q
    ||||||||||||||||||||||||  |||| ||||||||||||||||||| |||||||||||| | |||||||||||||| ||||| ||||||||| |||    
T  4762318 ggtcttgttaacgagtgctcccggatcactgtttaagcatcccaaatttagtaattattattttataaagtcaactattataattttcaatgcattcaat 4762417  T
Q  671 acacaacttttcattaaaaacttaccatttaaagtacttaaatagtgcc 719  Q
    |||||| |||| |||||||| |||| |||||||||  ||||| ||||||    
T  4762418 acacaattttttattaaaaatttactatttaaagtgattaaaaagtgcc 4762466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 570 - 718
Target Start/End: Complemental strand, 34904926 - 34904778
Alignment:
Q  570 gggtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaa 669  Q
    ||||||||||||||||||||| | |||||||||||||| ||| || ||||| |||||||| ||| ||||| ||||||||||||||||  |||| ||||||    
T  34904926 gggtcttgttaacgagtgctctctgggcactctttaagtatctcatatttagtaattattcttttaaaaaatcaactattacaatttttaatgaatttaa 34904827  T
Q  670 tacacaacttttcattaaaaacttaccatttaaagtacttaaatagtgc 718  Q
    |||| || |||||||||| ||||||| ||||||||| |||||| |||||    
T  34904826 tacaaaatttttcattaataacttacaatttaaagtgcttaaagagtgc 34904778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 592 - 720
Target Start/End: Complemental strand, 9449069 - 9448942
Alignment:
Q  592 cggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaatacacaacttttcattaaaaac 691  Q
    |||||||||||||||||| | |||||||| |||||||| ||| ||||| |||||||||| ||||| |||| |||| ||||||||||||||||||||||||    
T  9449069 cggggcactctttaagcaactcaaatttagtaattattcttttaaaaa-tcaactattataattttcaatacattcaatacacaacttttcattaaaaac 9448971  T
Q  692 ttaccatttaaagtacttaaatagtgccc 720  Q
    ||||||||||||||  ||||| |||||||    
T  9448970 ttaccatttaaagtgtttaaagagtgccc 9448942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 598 - 721
Target Start/End: Complemental strand, 31017418 - 31017295
Alignment:
Q  598 actctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaatacacaacttttcattaaaaacttacca 697  Q
    |||||| ||| |||||||||||| |||||||| |||||||||||||| ||||  ||||| ||||||||||||||||||||||||||||||||||||  ||    
T  31017418 actcttcaagtatcccaaatttagtaattattctttaaaaaagtcaaatattttaattttcaatgcatttaatacacaacttttcattaaaaacttttca 31017319  T
Q  698 tttaaagtacttaaatagtgcccc 721  Q
    |||||||| |||||| | ||||||    
T  31017318 tttaaagtgcttaaagaatgcccc 31017295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 594 - 714
Target Start/End: Complemental strand, 31452460 - 31452341
Alignment:
Q  594 gggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaatacacaacttttcattaaaaactt 693  Q
    ||||| ||||||| |||||||| |||| |||||||| ||| ||||||||||| |||||||||| ||||||||| |||||||||||||| |||||||||||    
T  31452460 gggcagtctttaaacatcccaagtttagtaattattcttttaaaaagtcaacaattacaattttcaatgcattcaatacacaactttt-attaaaaactt 31452362  T
Q  694 accatttaaagtacttaaata 714  Q
    || ||||||||| ||||||||    
T  31452361 actatttaaagtgcttaaata 31452341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 568 - 714
Target Start/End: Original strand, 20064877 - 20065022
Alignment:
Q  568 tagggtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcattt 667  Q
    |||||||||||||||||||||  |  |||||||||||||| |||| |||| || |||||||| ||| |||||||||||||||||||||| ||||| |||     
T  20064877 tagggtcttgttaacgagtgcctctagggcactctttaaggatcctaaatatagtaattattcttttaaaaagtcaactattacaattttcaatgtatta 20064976  T
Q  668 aatacacaacttttcattaaaaacttaccatttaaagtacttaaata 714  Q
    ||||||||| |||||| ||||| ||| | ||||||||| ||||||||    
T  20064977 aatacacaatttttca-taaaacctttctatttaaagtgcttaaata 20065022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 572 - 694
Target Start/End: Complemental strand, 11945009 - 11944888
Alignment:
Q  572 gtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaata 671  Q
    |||||||||||||||| ||| | | ||||||||||| |||| || |||| |||||||| || ||||| ||||||||||||||||| ||||||||| ||||    
T  11945009 gtcttgttaacgagtgttccagagacactctttaaggatcctaattttagtaattatttttaaaaaatgtcaactattacaattttcaatgcattgaata 11944910  T
Q  672 cacaacttttcattaaaaactta 694  Q
    |||||||||||| ||||||||||    
T  11944909 cacaacttttca-taaaaactta 11944888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 597 - 705
Target Start/End: Original strand, 15505539 - 15505647
Alignment:
Q  597 cactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaatacacaacttttcattaaaaacttacc 696  Q
    ||||||||||| ||  |||||||| |||||||| ||| ||||||| |||||||| ||||| |||| |||| ||||||||||||||||||  ||||||||     
T  15505539 cactctttaagtatttcaaatttaataattattctttcaaaaagtaaactattataattttcaatacattcaatacacaacttttcattccaaacttact 15505638  T
Q  697 atttaaagt 705  Q
    |||||||||    
T  15505639 atttaaagt 15505647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 575 - 681
Target Start/End: Original strand, 14295602 - 14295707
Alignment:
Q  575 ttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaatacac 674  Q
    ||||||||||||| ||||  | || |||||||| |||||||||||| |||||||| ||| |||| || |||||||||||||| ||||||||| |||||||    
T  14295602 ttgttaacgagtg-tcccatgacattctttaagaatcccaaatttagtaattattcttttaaaaggttaactattacaattttcaatgcattgaatacac 14295700  T
Q  675 aactttt 681  Q
    |||||||    
T  14295701 aactttt 14295707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 594 - 720
Target Start/End: Original strand, 19514863 - 19514989
Alignment:
Q  594 gggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaatacacaacttttcattaaaaactt 693  Q
    ||||||||| |||| |||| |||||||  ||||||| |||  ||||||||||||||| ||||  ||||||| | |||| ||||||||||||  |||||||    
T  19514863 gggcactctgtaaggatcctaaatttaacaattattctttttaaaagtcaactattataattatcaatgcaatgaatatacaacttttcatataaaactt 19514962  T
Q  694 accatttaaagtacttaaatagtgccc 720  Q
    || ||||||||| |||||| |||||||    
T  19514963 acaatttaaagtgcttaaagagtgccc 19514989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 570 - 702
Target Start/End: Original strand, 13538363 - 13538495
Alignment:
Q  570 gggtcttgttaacgagtgctcccg-gggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcattta 668  Q
    ||||||||||||||||||| |||| ||||||||||||||||| | |||||    ||||||| ||||||||| |||| || | |||||| ||||||||| |    
T  13538363 gggtcttgttaacgagtgcccccgagggcactctttaagcatactaaattagaaaattattctttaaaaaattcaaataattcaatttccaatgcattga 13538462  T
Q  669 atacacaacttttcattaaaaacttaccatttaa 702  Q
    ||||| ||||||||| |||||| |||| ||||||    
T  13538463 atacataacttttca-taaaaagttactatttaa 13538495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 600 - 703
Target Start/End: Original strand, 37993076 - 37993179
Alignment:
Q  600 tctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaatacacaacttttcattaaaaacttaccatt 699  Q
    ||||||| ||| | ||||||| ||| |||| ||| ||||| |||||||||||||||| |||||||||||||||| || |||| |||||||| |||| |||    
T  37993076 tctttaaacattctaaatttaataactattctttcaaaaaatcaactattacaattttcaatgcatttaatacataattttttattaaaaatttactatt 37993175  T
Q  700 taaa 703  Q
    ||||    
T  37993176 taaa 37993179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 569 - 700
Target Start/End: Complemental strand, 38534006 - 38533877
Alignment:
Q  569 agggtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcattta 668  Q
    |||||||||||||||||||| | |||  ||| ||||||||||| |||||||| |||||||| |||||| | ||||||||||  |||||  |||||||| |    
T  38534006 agggtcttgttaacgagtgccctcgga-caccctttaagcatctcaaatttagtaattattttttaaata-gtcaactattgtaatttctaatgcattca 38533909  T
Q  669 atacacaacttttcattaaaaacttaccattt 700  Q
    |||||||| ||||| ||| |||||||| ||||    
T  38533908 atacacaatttttctttacaaacttactattt 38533877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 569 - 666
Target Start/End: Original strand, 25622501 - 25622597
Alignment:
Q  569 agggtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatt 666  Q
    |||||||||||||||||||||||||  ||||||||||| ||| | ||||| | |||||||| ||||||||  |||| ||||||||||| |||||||||    
T  25622501 agggtcttgttaacgagtgctcccgatgcactctttaaacattctaaattaagtaattatt-tttaaaaatatcaaatattacaattttcaatgcatt 25622597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 622 - 717
Target Start/End: Complemental strand, 29239334 - 29239240
Alignment:
Q  622 taattattatttaaaaaagtcaactattacaatttacaatgcatttaatacacaacttttcattaaaaacttaccatttaaagtacttaaatagtg 717  Q
    |||||||| |||||||| ||||||||||||||||| ||||||||| ||||||| | ||||||||||| | |||| | ||||||| |||||| ||||    
T  29239334 taattattttttaaaaa-gtcaactattacaattttcaatgcattcaatacaccatttttcattaaagatttactaattaaagtgcttaaagagtg 29239240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 567 - 690
Target Start/End: Original strand, 32859750 - 32859873
Alignment:
Q  567 atagggtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatt 666  Q
    |||||||||||||||||||||| ||| ||||||||||||| ||| | |||||    | ||||| ||||||||||||||  | | |||||| ||||| |||    
T  32859750 atagggtcttgttaacgagtgcccccagggcactctttaaacatgctaaattaggaagttattctttaaaaaagtcaaacagttcaatttccaatgtatt 32859849  T
Q  667 taatacacaacttttcattaaaaa 690  Q
     ||||||||| ||||||| |||||    
T  32859850 aaatacacaagttttcataaaaaa 32859873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 569 - 700
Target Start/End: Complemental strand, 38533483 - 38533354
Alignment:
Q  569 agggtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcattta 668  Q
    |||||||||||||||||||| | ||   ||||||||||||||| |||||||| ||||| |||||| ||| |||||||||||  |||||  |||||||| |    
T  38533483 agggtcttgttaacgagtgccctcgta-cactctttaagcatctcaaatttaataatt-ttattttaaatagtcaactattgtaatttctaatgcattca 38533386  T
Q  669 atacacaacttttcattaaaaacttaccattt 700  Q
    |||||||| ||||| ||| ||| |||| ||||    
T  38533385 atacacaatttttctttacaaaattactattt 38533354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 572 - 694
Target Start/End: Original strand, 7673164 - 7673286
Alignment:
Q  572 gtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaata 671  Q
    |||| |||||| |||||| | ||| ||||||||||  |||| |||||||  ||||||| | |  ||||||||||||||||||||| |||| |||||| ||    
T  7673164 gtctcgttaacaagtgcttctgggacactctttaactatcctaaatttagcaattattctctttaaaagtcaactattacaattttcaatacatttagta 7673263  T
Q  672 cacaacttttcattaaaaactta 694  Q
    |||||||||| ||  ||||||||    
T  7673264 cacaactttttatataaaactta 7673286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 572 - 666
Target Start/End: Original strand, 20128300 - 20128394
Alignment:
Q  572 gtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatt 666  Q
    ||||||| ||||||||| |||||| ||||||||||| |||| |||||||  | ||||| |||||||||||||| | |||||| || |||||||||    
T  20128300 gtcttgtaaacgagtgcccccgggacactctttaaggatcctaaatttataatttattctttaaaaaagtcaaatgttacaaattccaatgcatt 20128394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 600 - 726
Target Start/End: Complemental strand, 22440251 - 22440126
Alignment:
Q  600 tctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaatacacaacttttcattaaaaacttaccatt 699  Q
    |||||||||||||||||||||  || |||| || |||||| |||| | |||||| || ||||||||| | |||| |  |||||| ||||||||||| |||    
T  22440251 tctttaagcatcccaaatttagaaaatattcttcaaaaaattcaaatgttacaagtttcaatgcattgattacatatattttca-taaaaacttactatt 22440153  T
Q  700 taaagtacttaaatagtgccccacatt 726  Q
     || ||||||||| |||||||||||||    
T  22440152 aaaggtacttaaagagtgccccacatt 22440126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 570 - 695
Target Start/End: Complemental strand, 1299101 - 1298976
Alignment:
Q  570 gggtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattattta--aaaaagtcaactattacaatttacaatgcattt 667  Q
    |||| |||||||||||||   ||||| |||||||||||||   || ||||| |||| |||||||   |||||||||||||| ||||||| || || ||||    
T  1299101 gggttttgttaacgagtgt--ccgggacactctttaagcacttcatatttagtaataattattttttaaaaagtcaactatcacaattttcactgtattt 1299004  T
Q  668 aatacacaacttttcattaaaaacttac 695  Q
    |||||| |||||||||||||||| ||||    
T  1299003 aatacataacttttcattaaaaatttac 1298976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 613 - 718
Target Start/End: Original strand, 41933142 - 41933247
Alignment:
Q  613 caaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaatacacaacttttcattaaaaacttaccatttaaagtacttaaa 712  Q
    ||||||||  ||||||| ||| |||||||||||||||||||||| ||||||| | | || ||||||||| || ||||| |||| | ||||||| ||||||    
T  41933142 caaatttagcaattattcttttaaaaagtcaactattacaattttcaatgcactcagtaaacaactttttataaaaaatttactaattaaagtgcttaaa 41933241  T
Q  713 tagtgc 718  Q
     |||||    
T  41933242 gagtgc 41933247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 568 - 684
Target Start/End: Original strand, 3882582 - 3882698
Alignment:
Q  568 tagggtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcattt 667  Q
    ||||||||||||||||||||| | ||||||||||||||||||| | ||| | |  ||||||| |||||||| ||||| |||| |  ||| |||||||||     
T  3882582 tagggtcttgttaacgagtgccctcggggcactctttaagcattctaaaataagcaattattctttaaaaaggtcaaatatttcggttttcaatgcattg 3882681  T
Q  668 aatacacaacttttcat 684  Q
    | ||||||  |||||||    
T  3882682 attacacacattttcat 3882698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 572 - 648
Target Start/End: Original strand, 21431049 - 21431124
Alignment:
Q  572 gtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactat 648  Q
    |||||||||||||||| ||||| | |||| ||||||||||||||  ||| |||||||| ||||||||||||||||||    
T  21431049 gtcttgttaacgagtg-tcccgagacactttttaagcatcccaatcttagtaattattttttaaaaaagtcaactat 21431124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 593 - 711
Target Start/End: Original strand, 5524452 - 5524570
Alignment:
Q  593 ggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaatacacaacttttcattaaaaact 692  Q
    |||||| ||||||||||||| |||| || |||||||| |||  |||||| || |||||||| ||  |||||||| ||| |||||||||| ||| || | |    
T  5524452 ggggcattctttaagcatcctaaatatagtaattatttttttgaaaagttaattattacaacttttaatgcattcaatgcacaactttttatttaagatt 5524551  T
Q  693 taccatttaaagtacttaa 711  Q
    ||| ||||||||| |||||    
T  5524552 tactatttaaagtgcttaa 5524570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 564 - 653
Target Start/End: Complemental strand, 24762858 - 24762769
Alignment:
Q  564 tttatagggtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaa 653  Q
    |||| ||||||||||||||||||||   | || ||||||||||| ||||||||||||  || ||||  ||||||||||||| ||||||||    
T  24762858 tttaaagggtcttgttaacgagtgccttcaggtcactctttaaggatcccaaatttagaaaatattccttaaaaaagtcaaatattacaa 24762769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 596 - 684
Target Start/End: Original strand, 8964386 - 8964474
Alignment:
Q  596 gcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaatacacaacttttcat 684  Q
    ||||| ||||||||| | ||||| | |||||||| ||||||||||| || |||| |||||| ||||||||| | ||||||| |||||||    
T  8964386 gcactgtttaagcattctaaattaagtaattattctttaaaaaagtaaaatatttcaatttccaatgcattgattacacaaattttcat 8964474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 564 - 675
Target Start/End: Original strand, 24765297 - 24765408
Alignment:
Q  564 tttatagggtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgc 663  Q
    |||| ||||||||||||||||||||  |    |||||||||||| ||||||||||||  || ||||  |||||||| |||| |||||||| || ||||||    
T  24765297 tttaaagggtcttgttaacgagtgcctctaaagcactctttaaggatcccaaatttagaaaatattccttaaaaaaatcaaatattacaaattccaatgc 24765396  T
Q  664 atttaatacaca 675  Q
    ||| | ||||||    
T  24765397 attgattacaca 24765408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 569 - 610
Target Start/End: Complemental strand, 15816843 - 15816802
Alignment:
Q  569 agggtcttgttaacgagtgctcccggggcactctttaagcat 610  Q
    |||||||||||||||||||| ||| |||||||||||||||||    
T  15816843 agggtcttgttaacgagtgcccccagggcactctttaagcat 15816802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 570 - 610
Target Start/End: Complemental strand, 2769383 - 2769344
Alignment:
Q  570 gggtcttgttaacgagtgctcccggggcactctttaagcat 610  Q
    ||||||||||||||||||| |||||||||||||||||||||    
T  2769383 gggtcttgttaacgagtgc-cccggggcactctttaagcat 2769344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 608 - 676
Target Start/End: Complemental strand, 34234022 - 34233954
Alignment:
Q  608 catcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaatacacaa 676  Q
    ||||||||||||| ||| ||||| | ||||||||||| |||||||| || ||||||||| | |||||||    
T  34234022 catcccaaatttagtaaatattactcaaaaaagtcaaatattacaaatttcaatgcattgattacacaa 34233954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 569 - 675
Target Start/End: Complemental strand, 2826095 - 2825989
Alignment:
Q  569 agggtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcattta 668  Q
    |||||||||||||||||||  || | || ||||||||||||| | ||| | |  ||||||| ||||||||||| || |||| | |||| ||||||||| |    
T  2826095 agggtcttgttaacgagtgtccctgtggtactctttaagcatactaaaataagaaattattttttaaaaaagtaaaatatttcgatttccaatgcattga 2825996  T
Q  669 atacaca 675  Q
     ||||||    
T  2825995 ttacaca 2825989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 560 - 606
Target Start/End: Complemental strand, 8773821 - 8773775
Alignment:
Q  560 aaattttatagggtcttgttaacgagtgctcccggggcactctttaa 606  Q
    |||||| | |||||||||||||||||| ||| |||||||||||||||    
T  8773821 aaatttaagagggtcttgttaacgagtactctcggggcactctttaa 8773775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 602 - 695
Target Start/End: Original strand, 814996 - 815088
Alignment:
Q  602 tttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaatacacaacttttcattaaaaacttac 695  Q
    |||||||||||||||||||  ||||||| ||||||||| |||| | | |||| || ||||||||| | |||||   |||||| |||||||||||    
T  814996 tttaagcatcccaaatttagaaattattttttaaaaaaatcaaatgtcacaaattccaatgcattgattacaccgattttca-taaaaacttac 815088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 568 - 616
Target Start/End: Complemental strand, 12075660 - 12075614
Alignment:
Q  568 tagggtcttgttaacgagtgctcccggggcactctttaagcatcccaaa 616  Q
    ||||||||||||||||||||  || |||||||||||||||||| |||||    
T  12075660 tagggtcttgttaacgagtg--ccgggggcactctttaagcataccaaa 12075614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 571 - 616
Target Start/End: Complemental strand, 20683134 - 20683089
Alignment:
Q  571 ggtcttgttaacgagtgctcccggggcactctttaagcatcccaaa 616  Q
    |||||||||||||||||| |||||| ||||||||||| || |||||    
T  20683134 ggtcttgttaacgagtgcccccgggacactctttaaggattccaaa 20683089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 594 - 675
Target Start/End: Original strand, 44195499 - 44195580
Alignment:
Q  594 gggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaatacaca 675  Q
    |||||||||||||||||   ||||| |  ||||||| |||| |||||| || || | |||||||||||||||| ||||||||    
T  44195499 gggcactctttaagcattttaaattaagaaattattctttacaaaagttaaataattcaatttacaatgcattaaatacaca 44195580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 72; Significance: 2e-32; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 570 - 721
Target Start/End: Complemental strand, 62663 - 62512
Alignment:
Q  570 gggtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaa 669  Q
    ||||||||||||||||||   || ||| |||||||||||||| || ||||| |||||||| ||| ||||||||||||||||| |||| ||||||||| ||    
T  62663 gggtcttgttaacgagtgtctccagggtactctttaagcatctcatatttagtaattattcttttaaaaagtcaactattacgattttcaatgcattcaa 62564  T
Q  670 tacacaacttttcattaaaaacttaccatttaaagtacttaaatagtgcccc 721  Q
    |||| || |||| ||||||||||||| ||||||||| |||||| ||| ||||    
T  62563 tacataattttttattaaaaacttactatttaaagtgcttaaagagtacccc 62512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 70; Significance: 4e-31; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 590 - 703
Target Start/End: Original strand, 1840971 - 1841084
Alignment:
Q  590 cccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaatacacaacttttcattaaaa 689  Q
    |||||||||||||||||||||   ||||||| |||||||| ||| ||||| |||||||||||||||| ||||||||| |||||||||||||| |||||||    
T  1840971 cccggggcactctttaagcatattaaatttaataattattcttttaaaaaatcaactattacaatttccaatgcattcaatacacaacttttaattaaaa 1841070  T
Q  690 acttaccatttaaa 703  Q
    ||||| ||||||||    
T  1841071 acttatcatttaaa 1841084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 565 - 712
Target Start/End: Complemental strand, 19293596 - 19293449
Alignment:
Q  565 ttatagggtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgca 664  Q
    |||||||||||| |||||||||| || |||| |||||||||||||||| |||||||  ||||||||||| ||||||| |||||||||||||| | |||||    
T  19293596 ttatagggtcttattaacgagtgttctcgggacactctttaagcatcctaaatttaacaattattattttaaaaagttaactattacaatttccgatgca 19293497  T
Q  665 tttaatacacaacttttcattaaaaacttaccatttaaagtacttaaa 712  Q
     | ||||  ||||||||||| |||||| ||| | ||||||| ||||||    
T  19293496 ctcaataaccaacttttcataaaaaacctactaattaaagtgcttaaa 19293449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 572 - 717
Target Start/End: Complemental strand, 17215819 - 17215674
Alignment:
Q  572 gtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaata 671  Q
    ||||||||||||||||   | ||  |||| |||||||||   ||||||| |||||||| ||| |||||||||||||||||||||| ||||||||| ||||    
T  17215819 gtcttgttaacgagtgtctcaggtacactttttaagcatttaaaatttagtaattatttttttaaaaagtcaactattacaattttcaatgcattcaata 17215720  T
Q  672 cacaacttttcattaaaaacttaccatttaaagtacttaaatagtg 717  Q
     |||| |||| ||||||||||||||||||||||| |||||| ||||    
T  17215719 aacaattttttattaaaaacttaccatttaaagtgcttaaagagtg 17215674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 569 - 689
Target Start/End: Complemental strand, 2692568 - 2692449
Alignment:
Q  569 agggtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcattta 668  Q
    |||||||||||||| ||||| || ||| ||||||||||| |||| ||||||| |||||||||||| |||||||||||||||||||||| ||||| | | |    
T  2692568 agggtcttgttaacaagtgcacc-gggacactctttaagaatccaaaatttagtaattattattttaaaaagtcaactattacaatttccaatgaagtga 2692470  T
Q  669 atacacaacttttcattaaaa 689  Q
    ||||||||||||| |||||||    
T  2692469 atacacaactttttattaaaa 2692449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 571 - 705
Target Start/End: Original strand, 3766249 - 3766380
Alignment:
Q  571 ggtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaat 670  Q
    |||||||||||||||||| ||   |||||||||||||||||||||||||   ||||||| ||| |||||||||| |||||||||||| ||| |||| | |    
T  3766249 ggtcttgttaacgagtgcccc---ggcactctttaagcatcccaaatttggaaattattcttttaaaaagtcaattattacaatttataatacattcatt 3766345  T
Q  671 acacaacttttcattaaaaacttaccatttaaagt 705  Q
    ||| ||||||||||  |||||||| ||||||||||    
T  3766346 acataacttttcatataaaacttatcatttaaagt 3766380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 573 - 721
Target Start/End: Complemental strand, 34232090 - 34231943
Alignment:
Q  573 tcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaatac 672  Q
    |||||||||||||||| || | |||||||||||| ||||  ||||||| |||||||| |||||||||   |||| || |||||| ||||| |||||||||    
T  34232090 tcttgttaacgagtgccccggaggcactctttaaccatcttaaatttaataattattctttaaaaaaaataactgttgcaattttcaatgtatttaatac 34231991  T
Q  673 acaacttttcattaaaaacttaccatttaaagtacttaaatagtgcccc 721  Q
    ||||||||||||||| |||||  |||||||||  |||||| ||||||||    
T  34231990 acaacttttcattaagaactt-tcatttaaagggcttaaagagtgcccc 34231943  T

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Target: chr6; HSP #7
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 626 - 712
Target Start/End: Original strand, 31855078 - 31855164
Alignment:
Q  626 tattatttaaaaaagtcaactattacaatttacaatgcatttaatacacaacttttcattaaaaacttaccatttaaagtacttaaa 712  Q
    |||||||| |||||||||||||||||||||| ||||||||| |||| |||| |||||||||||||||||| ||||||||| ||||||    
T  31855078 tattattttaaaaagtcaactattacaatttccaatgcattcaatatacaatttttcattaaaaacttactatttaaagtgcttaaa 31855164  T

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Target: chr6; HSP #8
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 605 - 717
Target Start/End: Original strand, 7421675 - 7421787
Alignment:
Q  605 aagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaatacacaacttttcattaaaaacttaccatttaaag 704  Q
    |||||| ||||||||| ||||||||  || |||||||||| ||||||||||| |||||||||||||||||||||||| | |||||  |||| ||||||||    
T  7421675 aagcattccaaatttagtaattatttatttaaaaagtcaaatattacaattttcaatgcatttaatacacaactttttaataaaactttactatttaaag 7421774  T
Q  705 tacttaaatagtg 717  Q
    | |||||| ||||    
T  7421775 tgcttaaagagtg 7421787  T

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Target: chr6; HSP #9
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 622 - 718
Target Start/End: Original strand, 32823697 - 32823793
Alignment:
Q  622 taattattatttaaaaaagtcaactattacaatttacaatgcatttaatacacaacttttcattaaaaacttaccatttaaagtacttaaatagtgc 718  Q
    |||||||| |||  ||||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||   ||||||||| |||||| |||||    
T  32823697 taattattcttttgaaaagtcaattattacaattttcaatgcattcaatacacaacttttcattaaaaacttgttatttaaagtgcttaaagagtgc 32823793  T

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Target: chr6; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 597 - 720
Target Start/End: Complemental strand, 1479203 - 1479081
Alignment:
Q  597 cactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaatacacaacttttcattaaaaacttacc 696  Q
    ||||||||||  |||||||||||| |||| ||| ||| |||||| ||| ||| ||||||| ||||||||| ||||||||| ||| || |||||| |||||    
T  1479203 cactctttaaagatcccaaatttagtaatcattcttttaaaaaggcaattatgacaattttcaatgcattgaatacacaattttaca-taaaaatttacc 1479105  T
Q  697 atttaaagtacttaaatagtgccc 720  Q
    ||||||||| |||||| |||||||    
T  1479104 atttaaagtgcttaaagagtgccc 1479081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 569 - 684
Target Start/End: Original strand, 35229259 - 35229374
Alignment:
Q  569 agggtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcattta 668  Q
    |||||||||||||||||||| |||||| ||||||||||| | ||||||||||   |||||| ||| |||||||||  |||||||| || |||| |||| |    
T  35229259 agggtcttgttaacgagtgcccccgggacactctttaaggaacccaaatttagcgattattctttcaaaaagtcacatattacaaattccaatacattga 35229358  T
Q  669 atacacaacttttcat 684  Q
    | ||||||||||||||    
T  35229359 acacacaacttttcat 35229374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 597 - 695
Target Start/End: Complemental strand, 26669390 - 26669292
Alignment:
Q  597 cactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaatacacaacttttcattaaaaacttac 695  Q
    |||||||||||||   || ||||| |||||||| ||| |||||||||||||||||||||| || || |||||||||| |||||||||||||||| ||||    
T  26669390 cactctttaagcacttcatatttaataattattcttttaaaaagtcaactattacaattttcactgtatttaatacataacttttcattaaaaatttac 26669292  T

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Target: chr6; HSP #13
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 577 - 693
Target Start/End: Original strand, 28874374 - 28874490
Alignment:
Q  577 gttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaatacacaa 676  Q
    |||||| |||| ||| || ||||||||||||||||  ||| ||| |||||||| |||  |||| |||||||||| ||||| ||||||||| |||||| ||    
T  28874374 gttaacaagtgttcctggtgcactctttaagcatcataaaattagtaattattcttttgaaaaatcaactattataatttccaatgcattcaatacaaaa 28874473  T
Q  677 cttttcattaaaaactt 693  Q
     ||||||||||||||||    
T  28874474 tttttcattaaaaactt 28874490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 597 - 718
Target Start/End: Original strand, 27778749 - 27778869
Alignment:
Q  597 cactctttaagcatcccaaatttactaattattattta-aaaaagtcaactattacaatttacaatgcatttaatacacaacttttcattaaaaacttac 695  Q
    ||||||||||| |||| ||||||| |||||||| |||  ||||||||||| |||| ||||| ||||||||| ||||||| | |||||| |||||| ||||    
T  27778749 cactctttaagaatcctaaatttagtaattattttttttaaaaagtcaacgattataattttcaatgcattcaatacac-atttttca-taaaaatttac 27778846  T
Q  696 catttaaagtacttaaatagtgc 718  Q
    |||||||||| |||||| |||||    
T  27778847 catttaaagtgcttaaagagtgc 27778869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 575 - 717
Target Start/End: Original strand, 30739572 - 30739714
Alignment:
Q  575 ttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaatacac 674  Q
    |||||||||||||    |||||||||||||||| || | ||||||| |||||||| | | ||||||| ||||  ||| |||| ||||||||| |||||||    
T  30739572 ttgttaacgagtgtcttcggggcactctttaagtattctaaatttagtaattattctattaaaaagttaactggtacgatttccaatgcattcaatacac 30739671  T
Q  675 aacttttcattaaaaacttaccatttaaagtacttaaatagtg 717  Q
    || ||||||||||||| ||| ||||| || | |||||| ||||    
T  30739672 aatttttcattaaaaatttatcattttaaatgcttaaaaagtg 30739714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 569 - 703
Target Start/End: Original strand, 2864845 - 2864978
Alignment:
Q  569 agggtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcattta 668  Q
    |||||||| ||||| | || || ||||| | |||||||| ||  ||||||||  ||||||| ||| |||||   |||||||||||||||||||||||| |    
T  2864845 agggtcttattaactaatgttcacggggaattctttaaggatttcaaatttagcaattattttttcaaaaat--aactattacaatttacaatgcattaa 2864942  T
Q  669 atacacaacttttcat-taaaaacttaccatttaaa 703  Q
    |||||||| |||||||  ||||||||||||||||||    
T  2864943 atacacaatttttcatcaaaaaacttaccatttaaa 2864978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 569 - 705
Target Start/End: Complemental strand, 5446801 - 5446665
Alignment:
Q  569 agggtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcattta 668  Q
    |||||||||||||||||||  || ||| |||| | ||||||| | ||| ||| |||||||| |||  || |||||||| ||||||||| ||||||||| |    
T  5446801 agggtcttgttaacgagtgtcccagggacactttgtaagcattctaaaattagtaattattcttttgaatagtcaactgttacaattttcaatgcattca 5446702  T
Q  669 atacacaacttttcattaaaaacttaccatttaaagt 705  Q
    || ||| |||||| |||||||| || | |||||||||    
T  5446701 atgcaccacttttaattaaaaaattgctatttaaagt 5446665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 573 - 720
Target Start/End: Original strand, 9762774 - 9762921
Alignment:
Q  573 tcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaatac 672  Q
    |||||||||||||||| ||||   |||||||||| ||||  ||||||| || || || ||| |||||||||| ||||| |||||  ||| |||| | |||    
T  9762774 tcttgttaacgagtgcccccgaaacactctttaaacatcttaaatttagtattt-ttcttttaaaaagtcaattattataatttctaatacattcagtac 9762872  T
Q  673 acaacttttca-ttaaaaacttaccatttaaagtacttaaatagtgccc 720  Q
    ||||||||||| ||||||| ||||||||||||||  ||||| |||||||    
T  9762873 acaacttttcatttaaaaatttaccatttaaagtgattaaagagtgccc 9762921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 573 - 717
Target Start/End: Original strand, 23399081 - 23399225
Alignment:
Q  573 tcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaatac 672  Q
    |||||||||||||||||||||| ||| | || ||| |||  |||||||  ||||||| ||| ||||||| |||||||| ||||| ||||| |||   | |    
T  23399081 tcttgttaacgagtgctcccggtgcagttttcaagtatcttaaatttagaaattattcttttaaaaagttaactattataattttcaatgtattcgttgc 23399180  T
Q  673 acaacttttcattaaaaacttaccatttaaagtacttaaatagtg 717  Q
    | ||||||| ||  ||||||||  |||||||||||||||| ||||    
T  23399181 ataacttttaatataaaacttaatatttaaagtacttaaagagtg 23399225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 564 - 627
Target Start/End: Original strand, 31854756 - 31854819
Alignment:
Q  564 tttatagggtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaatta 627  Q
    ||||||||||||| ||||||||||| |||| | ||||||||||||||| |||||||| ||||||    
T  31854756 tttatagggtcttattaacgagtgcccccgagacactctttaagcatctcaaatttagtaatta 31854819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 646 - 712
Target Start/End: Original strand, 30801785 - 30801851
Alignment:
Q  646 tattacaatttacaatgcatttaatacacaacttttcattaaaaacttaccatttaaagtacttaaa 712  Q
    ||||| ||||| ||||||||| |||||||||||||| ||||||||||| | ||||||||| ||||||    
T  30801785 tattataattttcaatgcattcaatacacaacttttaattaaaaacttgctatttaaagtgcttaaa 30801851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 643 - 703
Target Start/End: Original strand, 2884128 - 2884191
Alignment:
Q  643 aactattacaatttacaatgcatttaatacacaacttttcat---taaaaacttaccatttaaa 703  Q
    |||||||||||||||||||||||| ||||||||| |||||||    ||||||||||||||||||    
T  2884128 aactattacaatttacaatgcattaaatacacaatttttcataaaaaaaaacttaccatttaaa 2884191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 569 - 638
Target Start/End: Complemental strand, 13445870 - 13445801
Alignment:
Q  569 agggtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaa 638  Q
    |||||||||||||||||||  ||||| ||||||||||||||| | ||||| | ||| |||| ||||||||    
T  13445870 agggtcttgttaacgagtgtccccggtgcactctttaagcatgctaaattaagtaagtattctttaaaaa 13445801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 613 - 705
Target Start/End: Complemental strand, 1371259 - 1371168
Alignment:
Q  613 caaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaatacacaacttttcattaaaaacttaccatttaaagt 705  Q
    |||||||| |||||||| ||| ||||||||||||   ||||||| ||||||||| |||| || | |||||| ||||||| |||| ||||||||    
T  1371259 caaatttaataattattcttttaaaaagtcaacttccacaattttcaatgcattgaatatacgatttttca-taaaaacctaccttttaaagt 1371168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 613 - 705
Target Start/End: Complemental strand, 1379007 - 1378916
Alignment:
Q  613 caaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaatacacaacttttcattaaaaacttaccatttaaagt 705  Q
    |||||||| |||||||| ||| ||||||||||||   ||||||| ||||||||| |||| || | |||||| ||||||| |||| ||||||||    
T  1379007 caaatttaataattattcttttaaaaagtcaacttccacaattttcaatgcattgaatatacgatttttca-taaaaacctaccttttaaagt 1378916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 597 - 661
Target Start/End: Complemental strand, 11720989 - 11720925
Alignment:
Q  597 cactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaat 661  Q
    |||||||||| ||||| |||||||  ||||||| ||| || ||||||||||||||||||| ||||    
T  11720989 cactctttaaacatcctaaatttaacaattattcttttaagaagtcaactattacaattttcaat 11720925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 614 - 706
Target Start/End: Complemental strand, 24103872 - 24103780
Alignment:
Q  614 aaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaatacacaacttttcattaaaaacttaccatttaaagta 706  Q
    ||||||| ||||||||  ||  |||| | ||||||||||||||  |||| ||||||||||||| |||| |||||||| |||  ||||||||||    
T  24103872 aaatttagtaattatttgttttaaaaattaactattacaatttttaatgaatttaatacacaatttttaattaaaaatttattatttaaagta 24103780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 626 - 721
Target Start/End: Original strand, 12132551 - 12132645
Alignment:
Q  626 tattatttaaaaaagtcaactattacaatttacaatgcatttaatacacaacttttcattaaaaacttaccatttaaagtacttaaatagtgcccc 721  Q
    |||| |||||||| ||||| || | |||||| ||||||||||||||||||| |||||| || ||||||||| || || ||  ||||| ||||||||    
T  12132551 tattctttaaaaacgtcaaataattcaattttcaatgcatttaatacacaaattttca-tagaaacttacctttaaaggtgtttaaagagtgcccc 12132645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 569 - 695
Target Start/End: Original strand, 15588622 - 15588747
Alignment:
Q  569 agggtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcattta 668  Q
    |||||||||||||| |||||| ||| | || |||||||| ||  ||||||||  || |||| ||||||||| | || | |||||| || ||||||||| |    
T  15588622 agggtcttgttaacaagtgcttccgagacattctttaaggatatcaaatttataaaatattctttaaaaaaattaaatgttacaaatttcaatgcattga 15588721  T
Q  669 atacacaacttttcattaaaaacttac 695  Q
     |||| || |||||| |||||||||||    
T  15588722 ttacataatttttca-taaaaacttac 15588747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 570 - 607
Target Start/End: Original strand, 3766388 - 3766424
Alignment:
Q  570 gggtcttgttaacgagtgctcccggggcactctttaag 607  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  3766388 gggtcttgttaacgagtgc-cccggggcactctttaag 3766424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 565 - 666
Target Start/End: Original strand, 30509279 - 30509380
Alignment:
Q  565 ttatagggtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgca 664  Q
    |||| ||||||||||||||||||   ||||  |||||||||||||| ||||| | |  ||||||| ||||||||| ||||  ||| | |||| |||||||    
T  30509279 ttattgggtcttgttaacgagtgtctccggaacactctttaagcataccaaaataagcaattattctttaaaaaaatcaaacatttcgattttcaatgca 30509378  T
Q  665 tt 666  Q
    ||    
T  30509379 tt 30509380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 70; Significance: 4e-31; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 570 - 701
Target Start/End: Complemental strand, 42846145 - 42846012
Alignment:
Q  570 gggtcttgttaacgagtgctcccggg-gcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaa-tgcattt 667  Q
    ||||||||||| |||||||  ||||  ||||||||||||||||| ||||||| |||||||| ||| ||||||||||||||| |||||| ||| ||||||     
T  42846145 gggtcttgttagcgagtgcctccggatgcactctttaagcatcctaaatttagtaattattctttgaaaaagtcaactatttcaattttcaattgcattc 42846046  T
Q  668 aatacacaacttttcattaaaaacttaccattta 701  Q
    ||||||||||||||||||||||||||| ||||||    
T  42846045 aatacacaacttttcattaaaaacttatcattta 42846012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 575 - 712
Target Start/End: Complemental strand, 29084033 - 29083895
Alignment:
Q  575 ttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaatacac 674  Q
    |||||||||||||||| || | || ||||||| ||||| ||| ||| |||||||| ||| ||||||| ||||||||||||||  ||||||||||||||||    
T  29084033 ttgttaacgagtgctcacgtgacattctttaatcatcctaaacttagtaattattcttttaaaaagttaactattacaatttttaatgcatttaatacac 29083934  T
Q  675 aacttttcattaaaaacttacca-tttaaagtacttaaa 712  Q
    ||||||||| ||||||||||| | |||||||| ||||||    
T  29083933 aacttttcaataaaaacttactattttaaagtgcttaaa 29083895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 572 - 705
Target Start/End: Complemental strand, 48180307 - 48180174
Alignment:
Q  572 gtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaata 671  Q
    ||||||||||||||||   ||||| ||||||||||||||||| ||||||  ||||||| ||| |||||||||||||||||||||| |||||||||   ||    
T  48180307 gtcttgttaacgagtgtctccgggacactctttaagcatccccaatttaacaattattcttttaaaaagtcaactattacaatttccaatgcattggtta 48180208  T
Q  672 cacaacttttcattaaaaacttaccatttaaagt 705  Q
    | |||| |||||| |||||||||| |||||||||    
T  48180207 cccaacatttcataaaaaacttactatttaaagt 48180174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 595 - 719
Target Start/End: Complemental strand, 26900138 - 26900012
Alignment:
Q  595 ggcactctttaagcatcccaaat-ttactaattatt-atttaaaaaagtcaactattacaatttacaatgcatttaatacacaacttttcattaaaaact 692  Q
    ||||||||||||||||||||||| | |  |||||||  |||||||||||||||||||||||||| ||||||||||| |||| ||||||||||  |||| |    
T  26900138 ggcactctttaagcatcccaaatgtgaaaaattattcttttaaaaaagtcaactattacaattttcaatgcatttattacataacttttcatataaaatt 26900039  T
Q  693 taccatttaaagtacttaaatagtgcc 719  Q
    |||||||||||||  ||||| ||||||    
T  26900038 taccatttaaagtgtttaaagagtgcc 26900012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 569 - 694
Target Start/End: Complemental strand, 52638296 - 52638173
Alignment:
Q  569 agggtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcattta 668  Q
    |||||||||||||| ||||| || ||| ||||||||||| |||| ||||||| |||||||||||| |||||| ||||||||||||||| ||||||| | |    
T  52638296 agggtcttgttaacaagtgcacc-gggacactctttaagaatccaaaatttagtaattattattttaaaaagccaactattacaatttccaatgcagtga 52638198  T
Q  669 atacacaacttttcattaaaaactta 694  Q
    |||||||| |||| | ||||||||||    
T  52638197 atacacaatttttta-taaaaactta 52638173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 596 - 694
Target Start/End: Complemental strand, 49362466 - 49362368
Alignment:
Q  596 gcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaatacacaacttttcattaaaaactta 694  Q
    ||||| ||||| ||||||||||||| |||||||| ||| ||||||| |||||||||||||| ||||| |||||||| |||| |||| ||||||||||||    
T  49362466 gcactttttaaacatcccaaatttaataattattcttttaaaaagttaactattacaatttccaatgtatttaatatacaattttttattaaaaactta 49362368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 602 - 722
Target Start/End: Original strand, 51351277 - 51351397
Alignment:
Q  602 tttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaatacacaacttttcattaaaaacttaccattta 701  Q
    ||||||||| | ||||||| |||||||| ||| |||||||  | ||||| ||||| |||| |||||||||||||| ||||||||||||||||||  ||||    
T  51351277 tttaagcattctaaatttaataattattcttttaaaaagtttagtattataatttccaatacatttaatacacaatttttcattaaaaacttacttttta 51351376  T
Q  702 aagtacttaaatagtgcccca 722  Q
    |||| |||||| |||| ||||    
T  51351377 aagtgcttaaagagtgtccca 51351397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 575 - 717
Target Start/End: Complemental strand, 12086895 - 12086754
Alignment:
Q  575 ttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaatacac 674  Q
    ||||||||||||| ||||| || ||| ||||| |||  |||||||| |||||||| |||  ||||| || |||||| ||||| || |||||| |||||||    
T  12086895 ttgttaacgagtg-tcccgaggtactttttaatcatttcaaatttagtaattattctttttaaaagacatctattataattttcagtgcattcaatacac 12086797  T
Q  675 aacttttcattaaaaacttaccatttaaagtacttaaatagtg 717  Q
    |  |||||||||||||||||| ||||  |||||||||||||||    
T  12086796 attttttcattaaaaacttactatttcgagtacttaaatagtg 12086754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 597 - 705
Target Start/End: Original strand, 16662970 - 16663079
Alignment:
Q  597 cactctttaagcatcccaaa--tttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaatacacaacttttcattaaaaactta 694  Q
    ||||||||||| |||| |||  |||| |||||||||||| |||||||||||||||||||||  ||||||| | |||||||||||||| | ||||||||||    
T  16662970 cactctttaagaatccaaaacttttagtaattattattttaaaaagtcaactattacaattaccaatgcagtgaatacacaacttttta-taaaaactta 16663068  T
Q  695 ccatttaaagt 705  Q
      |||||||||    
T  16663069 ttatttaaagt 16663079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 600 - 694
Target Start/End: Original strand, 24791495 - 24791588
Alignment:
Q  600 tctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaatacacaacttttcattaaaaactta 694  Q
    ||||||||||||  ||||||| |  ||||| ||||||| |||||||||||||||||| ||||| ||| |||||| ||||||||||||||||||||    
T  24791495 tctttaagcatcataaatttagtcgttattctttaaaa-agtcaactattacaattttcaatgtattcaatacataacttttcattaaaaactta 24791588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 622 - 685
Target Start/End: Original strand, 26143090 - 26143153
Alignment:
Q  622 taattattatttaaaaaagtcaactattacaatttacaatgcatttaatacacaacttttcatt 685  Q
    |||||||| ||| ||||||||||||||||||||||  |||||||||||||||||| ||||||||    
T  26143090 taattattcttttaaaaagtcaactattacaattttgaatgcatttaatacacaatttttcatt 26143153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 569 - 695
Target Start/End: Complemental strand, 45529258 - 45529133
Alignment:
Q  569 agggtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcattta 668  Q
    ||||| || ||||||||||| | |||||||||||||||||||||||||||||  || |||| || |||||||||||   |||||| || || |||||| |    
T  45529258 agggtattcttaacgagtgccctcggggcactctttaagcatcccaaatttagaaaatattcttcaaaaaagtcaaacgttacaagtttcagtgcattga 45529159  T
Q  669 atacacaacttttcattaaaaacttac 695  Q
     |||| || |||||| |||||||||||    
T  45529158 ttacataaattttca-taaaaacttac 45529133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 614 - 711
Target Start/End: Original strand, 40673446 - 40673543
Alignment:
Q  614 aaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaatacacaacttttcattaaaaacttaccatttaaagtacttaa 711  Q
    ||||||| | |||||| ||| ||||| ||||||||||||||||  |||  ||| ||||||| ||||||| ||||||||||| |||||||||| |||||    
T  40673446 aaatttaatcattattcttttaaaaattcaactattacaatttctaatatattcaatacactacttttctttaaaaacttatcatttaaagtgcttaa 40673543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 626 - 695
Target Start/End: Original strand, 42939856 - 42939925
Alignment:
Q  626 tattatttaaaaaagtcaactattacaatttacaatgcatttaatacacaacttttcattaaaaacttac 695  Q
    |||| ||| ||||||||||||||| |||||| ||||| ||||||||||||| |||||||| |||||||||    
T  42939856 tattcttttaaaaagtcaactattgcaattttcaatgaatttaatacacaatttttcatttaaaacttac 42939925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 593 - 705
Target Start/End: Complemental strand, 39551970 - 39551859
Alignment:
Q  593 ggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaatacacaacttttcattaaaaact 692  Q
    |||||||| ||||||||| |||||||||  ||||||| ||| ||||| |||||||| ||||||| |||| || | |||| |||||||||||| || ||||    
T  39551970 ggggcactatttaagcataccaaatttagcaattattcttttaaaaaatcaactat-acaattttcaatacactcaataaacaacttttcataaagaact 39551872  T
Q  693 taccatttaaagt 705  Q
    ||| | |||||||    
T  39551871 tactaattaaagt 39551859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 614 - 712
Target Start/End: Complemental strand, 11132659 - 11132558
Alignment:
Q  614 aaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaatacacaacttttcat---taaaaacttaccatttaaagtactta 710  Q
    |||||||  ||||||||||| ||||||| |||||||||||||| ||||| ||| |||| ||||||||| ||    ||||| |||||||||||||| ||||    
T  11132659 aaatttagcaattattatttcaaaaagttaactattacaattttcaatgtattgaataaacaactttttataaaaaaaaaattaccatttaaagtgctta 11132560  T
Q  711 aa 712  Q
    ||    
T  11132559 aa 11132558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 568 - 606
Target Start/End: Original strand, 17517519 - 17517557
Alignment:
Q  568 tagggtcttgttaacgagtgctcccggggcactctttaa 606  Q
    |||||||||||||||||||||||||||||||||||||||    
T  17517519 tagggtcttgttaacgagtgctcccggggcactctttaa 17517557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 569 - 638
Target Start/End: Complemental strand, 3027124 - 3027055
Alignment:
Q  569 agggtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaa 638  Q
    ||||||||||||||||||||  |||| ||||||||||||||| | ||||| | ||||| |||||||||||    
T  3027124 agggtcttgttaacgagtgcctccggagcactctttaagcattctaaattaagtaatttttatttaaaaa 3027055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 573 - 705
Target Start/End: Original strand, 24313522 - 24313654
Alignment:
Q  573 tcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgca-tttaata 671  Q
    |||||||||||||||  | ||||||||||||||| ||| | ||||| |  ||||||| |||||||| |||||   || |||||| ||||||| |||| ||    
T  24313522 tcttgttaacgagtgtcctcggggcactctttaaacattctaaattaaacaattattctttaaaaatgtcaaagttttcaattttcaatgcattttacta 24313621  T
Q  672 cacaacttttcattaaaaacttaccatttaaagt 705  Q
    ||||| |||||| |||||| ||| ||||||||||    
T  24313622 cacaaattttca-taaaaagttatcatttaaagt 24313654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 567 - 695
Target Start/End: Complemental strand, 4305283 - 4305156
Alignment:
Q  567 atagggtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatt 666  Q
    |||| ||||||||||||||||| || ||||||||||||||| || | |||||||  |  |||| |||||||||||||| ||||| || ||  |||| |||    
T  4305283 atagagtcttgttaacgagtgcccctggggcactctttaaggatactaaatttagaatatattttttaaaaaagtcaaatattataaattctaatgtatt 4305184  T
Q  667 taatacacaacttttcattaaaaacttac 695  Q
     | ||||| | |||||| |||||||||||    
T  4305183 gattacacgatttttca-taaaaacttac 4305156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 572 - 616
Target Start/End: Original strand, 52308986 - 52309030
Alignment:
Q  572 gtcttgttaacgagtgctcccggggcactctttaagcatcccaaa 616  Q
    ||||||||||||||||| ||||||||||||||||||||| |||||    
T  52308986 gtcttgttaacgagtgcccccggggcactctttaagcataccaaa 52309030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 569 - 689
Target Start/End: Original strand, 53040436 - 53040556
Alignment:
Q  569 agggtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcattta 668  Q
    ||||||||| |||||||| ||| || | ||||||||||| || | ||||| |  ||||||||||||||||| |||| || | |||||| ||||| ||| |    
T  53040436 agggtcttgctaacgagtactctcgtgacactctttaaggattctaaattaagaaattattatttaaaaaattcaaatacttcaatttccaatgtattga 53040535  T
Q  669 atacacaacttttcattaaaa 689  Q
    ||||||||  |||||| ||||    
T  53040536 atacacaaactttcataaaaa 53040556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 569 - 689
Target Start/End: Complemental strand, 54290916 - 54290796
Alignment:
Q  569 agggtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcattta 668  Q
    ||||||||||||||||||   |||||||||||||||||||||   |||||    | ||||| ||||||||||||||  | | |||||| ||||| ||| |    
T  54290916 agggtcttgttaacgagtatccccggggcactctttaagcatgataaattaggaagttattctttaaaaaagtcaaacagttcaatttccaatgtattaa 54290817  T
Q  669 atacacaacttttcattaaaa 689  Q
    |||||||| ||||||| ||||    
T  54290816 atacacaagttttcataaaaa 54290796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 567 - 638
Target Start/End: Original strand, 29611985 - 29612056
Alignment:
Q  567 atagggtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaa 638  Q
    |||||||||||||||||||||| |||||| |||||||||| ||| | ||| | | |||||||| ||||||||    
T  29611985 atagggtcttgttaacgagtgcccccgggacactctttaaacattctaaaataagtaattattctttaaaaa 29612056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 626 - 720
Target Start/End: Complemental strand, 41309936 - 41309839
Alignment:
Q  626 tattatttaaaaaagtcaactattacaatttacaatgcatttaataca---caacttttcattaaaaacttaccatttaaagtacttaaatagtgccc 720  Q
    |||| ||| ||||||| || ||||||||||| |||||||||| ||| |   ||| ||||||||||||||||| ||||||||||  ||||| |||||||    
T  41309936 tattcttttaaaaagttaattattacaattttcaatgcatttgatatagtacaatttttcattaaaaacttatcatttaaagtgtttaaagagtgccc 41309839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 569 - 656
Target Start/End: Complemental strand, 46093690 - 46093603
Alignment:
Q  569 agggtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaattt 656  Q
    |||||||||||||||||||||  |||  ||||||||||  ||   |||||||  ||||||| ||||||||||| ||||||||||||||    
T  46093690 agggtcttgttaacgagtgctttcggaacactctttaatgatattaaatttagcaattattctttaaaaaagttaactattacaattt 46093603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 597 - 712
Target Start/End: Original strand, 47638890 - 47639005
Alignment:
Q  597 cactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaatacacaacttttcattaaaaacttacc 696  Q
    |||||||||||||| | |||||||   |||||  ||| ||||||| ||||||||||||||  |||||| | ||||||||| ||||||| || |||||||     
T  47638890 cactctttaagcatactaaatttaactattatgcttttaaaaagttaactattacaatttttaatgcactcaatacacaatttttcataaagaacttact 47638989  T
Q  697 atttaaagtacttaaa 712  Q
    | ||||| | ||||||    
T  47638990 aattaaaatgcttaaa 47639005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 569 - 607
Target Start/End: Original strand, 28434478 - 28434516
Alignment:
Q  569 agggtcttgttaacgagtgctcccggggcactctttaag 607  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  28434478 agggtcttgttaacgagtgctcccgggacactctttaag 28434516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 569 - 705
Target Start/End: Complemental strand, 48811507 - 48811372
Alignment:
Q  569 agggtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcattta 668  Q
    |||||||||||||| |||||  ||  | || |||||||| |||| |||||||  || ||||  ||||||||||| | | |||||| || ||||||||| |    
T  48811507 agggtcttgttaactagtgcatccaagacattctttaaggatcctaaatttagaaaatattcattaaaaaagtctaatgttacaaatttcaatgcattga 48811408  T
Q  669 atacacaacttttcattaaaaacttaccatttaaagt 705  Q
     ||||||| |||||| ||||||||||| ||| |||||    
T  48811407 ttacacaatttttca-taaaaacttactattaaaagt 48811372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 622 - 685
Target Start/End: Complemental strand, 22730572 - 22730509
Alignment:
Q  622 taattattatttaaaaaagtcaactattacaatttacaatgcatttaatacacaacttttcatt 685  Q
    |||||||| ||| |||||||||||||||| ||||| ||||||||| | |||| || ||||||||    
T  22730572 taattattcttttaaaaagtcaactattataattttcaatgcattaattacaaaaattttcatt 22730509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 668 - 703
Target Start/End: Original strand, 26143164 - 26143199
Alignment:
Q  668 aatacacaacttttcattaaaaacttaccatttaaa 703  Q
    ||||||||| ||||||||||||||||||||||||||    
T  26143164 aatacacaaattttcattaaaaacttaccatttaaa 26143199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 569 - 616
Target Start/End: Original strand, 29099142 - 29099189
Alignment:
Q  569 agggtcttgttaacgagtgctcccggggcactctttaagcatcccaaa 616  Q
    ||||||||||||||||||| ||| |||||||| ||||||||| |||||    
T  29099142 agggtcttgttaacgagtgttccaggggcactttttaagcattccaaa 29099189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 569 - 620
Target Start/End: Original strand, 40425082 - 40425133
Alignment:
Q  569 agggtcttgttaacgagtgctcccggggcactctttaagcatcccaaattta 620  Q
    |||||||||||||| ||||||  |||||||||||||||  ||||||||||||    
T  40425082 agggtcttgttaacaagtgctttcggggcactctttaaagatcccaaattta 40425133  T

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Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 569 - 607
Target Start/End: Original strand, 34758896 - 34758934
Alignment:
Q  569 agggtcttgttaacgagtgctcccggggcactctttaag 607  Q
    ||||||||||||||||||||  |||||||||||||||||    
T  34758896 agggtcttgttaacgagtgcctccggggcactctttaag 34758934  T

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Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 573 - 639
Target Start/End: Original strand, 38723212 - 38723277
Alignment:
Q  573 tcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaa 639  Q
    |||||||||||||||| ||| | |||||||||||| ||||||||||||  || |||| |||||||||    
T  38723212 tcttgttaacgagtgc-cccagagcactctttaaggatcccaaatttaaaaaatattctttaaaaaa 38723277  T

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Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 569 - 690
Target Start/End: Original strand, 45757896 - 45758017
Alignment:
Q  569 agggtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcattta 668  Q
    |||||||||||||||||||   ||||  ||||||||||||||   ||||| |  ||||||| |||||||| |||||   || |||||||||||||| | |    
T  45757896 agggtcttgttaacgagtgtctccggatcactctttaagcatgttaaattaagcaattattctttaaaaatgtcaaagttttcaatttacaatgcactga 45757995  T
Q  669 atacacaacttttcattaaaaa 690  Q
     |||||||  |||||| |||||    
T  45757996 ttacacaaactttcataaaaaa 45758017  T

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Target: scaffold0119 (Bit Score: 51; Significance: 8e-20; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 597 - 695
Target Start/End: Original strand, 1403 - 1501
Alignment:
Q  597 cactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaatacacaacttttcattaaaaacttac 695  Q
    |||||||||||||   || ||||| |||||||| ||| |||||||||||||||||||||| || || |||||||||| |||||||||||||||| ||||    
T  1403 cactctttaagcacttcatatttaataattattcttttaaaaagtcaactattacaattttcactgtatttaatacataacttttcattaaaaatttac 1501  T

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Target: scaffold0419 (Bit Score: 49; Significance: 1e-18; HSPs: 1)
Name: scaffold0419
Description:

Target: scaffold0419; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 577 - 693
Target Start/End: Original strand, 1040 - 1156
Alignment:
Q  577 gttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaatacacaa 676  Q
    |||||| |||| ||| || ||||||||||||||||  ||| ||| |||||||| |||  |||| |||||||||| ||||| ||||||||| |||||| ||    
T  1040 gttaacaagtgttcctggtgcactctttaagcatcataaaattagtaattattcttttgaaaaatcaactattataatttccaatgcattcaatacaaaa 1139  T
Q  677 cttttcattaaaaactt 693  Q
     ||||||||||||||||    
T  1140 tttttcattaaaaactt 1156  T

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Target: scaffold0268 (Bit Score: 48; Significance: 5e-18; HSPs: 1)
Name: scaffold0268
Description:

Target: scaffold0268; HSP #1
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 626 - 717
Target Start/End: Complemental strand, 20330 - 20240
Alignment:
Q  626 tattatttaaaaaagtcaactattacaatttacaatgcatttaatacacaacttttcattaaaaacttaccatttaaagtacttaaatagtg 717  Q
    |||| ||| ||||||| ||||||||||||||  |||||||| |||||||||||||||| |||||||||| |||||||||| |||||| ||||    
T  20330 tattcttttaaaaagttaactattacaatttcaaatgcattaaatacacaacttttca-taaaaacttatcatttaaagtgcttaaagagtg 20240  T

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Target: scaffold1444 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold1444
Description:

Target: scaffold1444; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 569 - 690
Target Start/End: Complemental strand, 1071 - 950
Alignment:
Q  569 agggtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcattta 668  Q
    |||||||| ||||||||||  | |||  |||||| || | |||| |||||||  |||| || ||| |||||||||||||||||||||| ||||| ||| |    
T  1071 agggtcttattaacgagtgtactcggaacactctgtatggatcctaaatttagcaattgttcttttaaaaagtcaactattacaattttcaatgtattga 972  T
Q  669 atacacaacttttcattaaaaa 690  Q
    ||||||| |||||||| |||||    
T  971 atacacatcttttcataaaaaa 950  T

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Target: scaffold1444; HSP #2
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 626 - 689
Target Start/End: Complemental strand, 1786 - 1723
Alignment:
Q  626 tattatttaaaaaagtcaactattacaatttacaatgcatttaatacacaacttttcattaaaa 689  Q
    |||| ||| |||||| ||||||||||||||| ||||||||| ||| ||||||||||||| ||||    
T  1786 tattcttttaaaaagccaactattacaatttccaatgcattgaatgcacaacttttcataaaaa 1723  T

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Target: scaffold0003 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 595 - 690
Target Start/End: Complemental strand, 103762 - 103667
Alignment:
Q  595 ggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaatacacaacttttcattaaaaa 690  Q
    |||||||||||||||||    ||||| |||||||| ||| |||||||| | |||||||||||  |||||||| |||| |||| |||||||||||||    
T  103762 ggcactctttaagcatctttgatttagtaattattcttttaaaaagtcgaatattacaatttttaatgcattcaatatacaatttttcattaaaaa 103667  T

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Target: scaffold0004 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 606 - 690
Target Start/End: Complemental strand, 335950 - 335866
Alignment:
Q  606 agcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaatacacaacttttcattaaaaa 690  Q
    ||||||||||||||| ||||||||  ||  |||||| || ||||| ||||| ||||| |||  ||||||||||||||||||||||    
T  335950 agcatcccaaatttagtaattattcatttcaaaagttaattattataattttcaatgtattcgatacacaacttttcattaaaaa 335866  T

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Target: scaffold0010 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 568 - 644
Target Start/End: Original strand, 26668 - 26743
Alignment:
Q  568 tagggtcttgttaacgagtgctcccggggcactctttaagcatcccaaatttactaattattatttaaaaaagtcaa 644  Q
    |||| |||| ||||| |||||||||||| |||||||||||||| | ||||| | |||||||||||| |||| |||||    
T  26668 taggatcttattaacaagtgctcccggg-cactctttaagcatgctaaattaagtaattattattttaaaatgtcaa 26743  T

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Target: scaffold0204 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 598 - 712
Target Start/End: Original strand, 25074 - 25189
Alignment:
Q  598 actctttaagcatcccaaatttactaattattatttaaaaaagtcaactattacaatttacaatgcatttaatacacaacttttcat-taaaaacttacc 696  Q
    ||||||||| |||||  ||||||  |||||||  || ||||| |||||||||||||||| ||||||||| | ||| ||| |||| ||  ||||||||||     
T  25074 actctttaaacatccttaatttaacaattatttctttaaaaaatcaactattacaattttcaatgcattgattactcaattttttataaaaaaacttact 25173  T
Q  697 atttaaagtacttaaa 712  Q
    ||||||| | ||||||    
T  25174 atttaaaatgcttaaa 25189  T

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Target: scaffold0111 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 573 - 627
Target Start/End: Original strand, 37949 - 38004
Alignment:
Q  573 tcttgttaacgagtgctc-ccggggcactctttaagcatcccaaatttactaatta 627  Q
    |||||||||||||||| | |||| ||||||||||||||||| ||||||| ||||||    
T  37949 tcttgttaacgagtgccctccggagcactctttaagcatcctaaatttaataatta 38004  T

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