View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11242_low_4 (Length: 637)

Name: NF11242_low_4
Description: NF11242
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11242_low_4
NF11242_low_4
[»] chr4 (7 HSPs)
chr4 (1-410)||(32822146-32822555)
chr4 (102-179)||(23226018-23226095)
chr4 (110-175)||(41594673-41594738)
chr4 (102-179)||(43095259-43095336)
chr4 (140-180)||(6121969-6122009)
chr4 (104-156)||(35663952-35664004)
chr4 (140-180)||(40913265-40913305)
[»] chr2 (8 HSPs)
chr2 (140-182)||(12338013-12338055)
chr2 (102-179)||(15243990-15244067)
chr2 (102-183)||(37804363-37804444)
chr2 (102-182)||(20900676-20900756)
chr2 (140-182)||(13344496-13344538)
chr2 (102-159)||(40712359-40712415)
chr2 (140-180)||(16243859-16243899)
chr2 (140-180)||(30099258-30099298)
[»] chr8 (5 HSPs)
chr8 (113-182)||(11809126-11809195)
chr8 (100-180)||(42842862-42842942)
chr8 (102-180)||(32211401-32211479)
chr8 (140-180)||(13246808-13246848)
chr8 (140-180)||(39571279-39571319)
[»] chr1 (6 HSPs)
chr1 (102-179)||(40676804-40676881)
chr1 (102-158)||(3694013-3694069)
chr1 (148-180)||(12043687-12043719)
chr1 (140-180)||(23278077-23278117)
chr1 (140-180)||(34042710-34042750)
chr1 (140-180)||(44955282-44955322)
[»] chr7 (1 HSPs)
chr7 (140-180)||(4790262-4790302)
[»] chr6 (3 HSPs)
chr6 (140-182)||(13043770-13043812)
chr6 (102-180)||(35031039-35031117)
chr6 (102-182)||(24579855-24579935)
[»] chr5 (2 HSPs)
chr5 (94-180)||(4443974-4444060)
chr5 (140-180)||(966224-966264)
[»] chr3 (3 HSPs)
chr3 (151-180)||(45093584-45093613)
chr3 (102-134)||(5237578-5237610)
chr3 (140-180)||(38964406-38964446)


Alignment Details
Target: chr4 (Bit Score: 316; Significance: 1e-178; HSPs: 7)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 316; E-Value: 1e-178
Query Start/End: Original strand, 1 - 410
Target Start/End: Original strand, 32822146 - 32822555
Alignment:
Q  1 tctctcgtgaatgaattctaggttgggcatgcatcccaacacagtnnnnnnnnnnnnnnnnnnttaactttgtacaacaaatatttgagtaaatttagat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||                  |||||||||||||||||||||||||||||||||||||    
T  32822146 tctctcgtgaatgaattctaggttgggcatgcatcccaacacagtcaaaaataattaaaaaaattaactttgtacaacaaatatttgagtaaatttagat 32822245  T
Q  101 aaacaaaaattgatgtatctgattcaaaatttggagtatatacatccatttttgttgatctaaatttttcttataaatagaattgatggagcgtatcaaa 200  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||| | |||||||| |||||||    
T  32822246 aaacaaaaattgatgtatttgattcaaaatttgaagtatatacatccatttttgttgacctaaatttttcttataaatagactggatggagcatatcaaa 32822345  T
Q  201 atatggcgtagacaacttttttgttgtccatttatcattataaacattcaaacttaacataaaacataattaactaaggtaaatttcagttaaataaaag 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  32822346 atatggcgtagacaacttttttgttgtccatttatcattataaacattcaaacttaagataaaacataattaactaaggtaaatttcagttaaataaaag 32822445  T
Q  301 agcacatccctatctcaatcagttaaatgttgaaattgttaggtcgaacaccgtgatcgagtctcaaattccgacccttcagttgtgtgtaagcttcaat 400  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  32822446 agcacatccctatctcaatcagttaaatgttgaaattgttagatcggacaccgtgatcgagtctcaaattccgacccttcacttgtgtgtaagcttcaat 32822545  T
Q  401 ggttcttgaa 410  Q
    ||||||||||    
T  32822546 ggttcttgaa 32822555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 102 - 179
Target Start/End: Complemental strand, 23226095 - 23226018
Alignment:
Q  102 aacaaaaattgatgtatctgattcaaaatttggagtatatacatccatttttgttgatctaaatttttcttataaata 179  Q
    ||||||| || ||||||||||| |||| |||| | |  ||||||| |||||||||||||||||| | |||||||||||    
T  23226095 aacaaaagtttatgtatctgatccaaattttgaactggatacatcaatttttgttgatctaaatatctcttataaata 23226018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 110 - 175
Target Start/End: Complemental strand, 41594738 - 41594673
Alignment:
Q  110 ttgatgtatctgattcaaaatttggagtatatacatccatttttgttgatctaaatttttcttata 175  Q
    |||||||||||| |||||||||||||  ||||||||| | ||||||||| | || ||| |||||||    
T  41594738 ttgatgtatctggttcaaaatttggaccatatacatcaacttttgttgacccaactttctcttata 41594673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 102 - 179
Target Start/End: Original strand, 43095259 - 43095336
Alignment:
Q  102 aacaaaaattgatgtatctgattcaaaatttggagtatatacatccatttttgttgatctaaatttttcttataaata 179  Q
    |||||||||| |||||| || |||||||||||||  | ||||||  |||||||||||  ||||| | |||||||||||    
T  43095259 aacaaaaattaatgtatatggttcaaaatttggaccagatacattaatttttgttgacttaaatatctcttataaata 43095336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 140 - 180
Target Start/End: Original strand, 6121969 - 6122009
Alignment:
Q  140 atacatccatttttgttgatctaaatttttcttataaatag 180  Q
    |||||| || |||||||||||||||||| ||||||||||||    
T  6121969 atacattcacttttgttgatctaaatttctcttataaatag 6122009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 35664004 - 35663952
Alignment:
Q  104 caaaaattgatgtatctgattcaaaatttggagtatatacatccatttttgtt 156  Q
    ||||| |||||||||||| |||||||||||||  | ||||||| |||||||||    
T  35664004 caaaagttgatgtatctggttcaaaatttggaccagatacatcaatttttgtt 35663952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 140 - 180
Target Start/End: Original strand, 40913265 - 40913305
Alignment:
Q  140 atacatccatttttgttgatctaaatttttcttataaatag 180  Q
    |||||| || |||||||||||||||||| ||||||||||||    
T  40913265 atacattcacttttgttgatctaaatttctcttataaatag 40913305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 35; Significance: 0.0000000002; HSPs: 8)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 140 - 182
Target Start/End: Original strand, 12338013 - 12338055
Alignment:
Q  140 atacatccatttttgttgatctaaatttttcttataaatagaa 182  Q
    |||||| |||||||||||| |||||||||||||||||||||||    
T  12338013 atacattcatttttgttgacctaaatttttcttataaatagaa 12338055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 102 - 179
Target Start/End: Complemental strand, 15244067 - 15243990
Alignment:
Q  102 aacaaaaattgatgtatctgattcaaaatttggagtatatacatccatttttgttgatctaaatttttcttataaata 179  Q
    ||||||| || |||||||||||||||||||| || || ||||||| | ||||||||||  |||| | |||||||||||    
T  15244067 aacaaaagttaatgtatctgattcaaaatttagactagatacatcaacttttgttgattcaaatatctcttataaata 15243990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 102 - 183
Target Start/End: Original strand, 37804363 - 37804444
Alignment:
Q  102 aacaaaaattgatgtatctgattcaaaatttggagtatatacatccatttttgttgatctaaatttttcttataaatagaat 183  Q
    |||||||||| || ||||||||||||  |||  |  | ||||||  ||||||||||||| ||||||||||||||||||||||    
T  37804363 aacaaaaattaatatatctgattcaattttttaatcagatacattaatttttgttgatccaaatttttcttataaatagaat 37804444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 102 - 182
Target Start/End: Complemental strand, 20900756 - 20900676
Alignment:
Q  102 aacaaaaattgatgtatctgattcaaaatttggagtatatacatccatttttgttgatctaaatttttcttataaatagaa 182  Q
    |||||||||||| ||||||| |||||||||||||  | ||||||| | ||||| ||| | |||| | ||||||||||||||    
T  20900756 aacaaaaattgacgtatctggttcaaaatttggacaagatacatcaacttttgctgacccaaatgtctcttataaatagaa 20900676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 140 - 182
Target Start/End: Complemental strand, 13344538 - 13344496
Alignment:
Q  140 atacatccatttttgttgatctaaatttttcttataaatagaa 182  Q
    |||||| |||||||||||| |||||||| ||||||||||||||    
T  13344538 atacattcatttttgttgacctaaatttctcttataaatagaa 13344496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 102 - 159
Target Start/End: Complemental strand, 40712415 - 40712359
Alignment:
Q  102 aacaaaaattgatgtatctgattcaaaatttggagtatatacatccatttttgttgat 159  Q
    ||||||||||| |||||||| |||||| |||||| || ||||||| ||||||||||||    
T  40712415 aacaaaaattgttgtatctggttcaaa-tttggactagatacatcgatttttgttgat 40712359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 140 - 180
Target Start/End: Original strand, 16243859 - 16243899
Alignment:
Q  140 atacatccatttttgttgatctaaatttttcttataaatag 180  Q
    |||||| || ||||||||| |||||||||||||||||||||    
T  16243859 atacattcacttttgttgacctaaatttttcttataaatag 16243899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 140 - 180
Target Start/End: Original strand, 30099258 - 30099298
Alignment:
Q  140 atacatccatttttgttgatctaaatttttcttataaatag 180  Q
    |||||| |||||||||||| |||||||| ||||||||||||    
T  30099258 atacattcatttttgttgacctaaatttctcttataaatag 30099298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 34; Significance: 0.0000000009; HSPs: 5)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 113 - 182
Target Start/End: Complemental strand, 11809195 - 11809126
Alignment:
Q  113 atgtatctgattcaaaatttggagtatatacatccatttttgttgatctaaatttttcttataaatagaa 182  Q
    ||||||||| || |||| ||||| || ||| |||||||||| ||||||||||| | ||||||||||||||    
T  11809195 atgtatctggttaaaaaattggattagataaatccatttttattgatctaaatatctcttataaatagaa 11809126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 100 - 180
Target Start/End: Original strand, 42842862 - 42842942
Alignment:
Q  100 taaacaaaaattgatgtatctgattcaaaatttggagtatatacatccatttttgttgatctaaatttttcttataaatag 180  Q
    ||||||||| |||||  |||||||||||||||| |   | ||||||| |||||||||||||  | ||||||||||||||||    
T  42842862 taaacaaaagttgatacatctgattcaaaatttagttcaaatacatcaatttttgttgatcagattttttcttataaatag 42842942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 102 - 180
Target Start/End: Original strand, 32211401 - 32211479
Alignment:
Q  102 aacaaaaattgatgtatctgattcaaaatttggagtatatacatccatttttgttgatctaaatttttcttataaatag 180  Q
    |||||||||||||||||||  || ||||||  |   | |||||| |||||||||||| |||||||| ||||||||||||    
T  32211401 aacaaaaattgatgtatctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaatag 32211479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 140 - 180
Target Start/End: Complemental strand, 13246848 - 13246808
Alignment:
Q  140 atacatccatttttgttgatctaaatttttcttataaatag 180  Q
    |||||| |||||||||||||| |||||| ||||||||||||    
T  13246848 atacattcatttttgttgatccaaatttctcttataaatag 13246808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 140 - 180
Target Start/End: Original strand, 39571279 - 39571319
Alignment:
Q  140 atacatccatttttgttgatctaaatttttcttataaatag 180  Q
    |||||| || |||||||||||||||||| ||||||||||||    
T  39571279 atacattcacttttgttgatctaaatttctcttataaatag 39571319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 34; Significance: 0.0000000009; HSPs: 6)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 102 - 179
Target Start/End: Complemental strand, 40676881 - 40676804
Alignment:
Q  102 aacaaaaattgatgtatctgattcaaaatttggagtatatacatccatttttgttgatctaaatttttcttataaata 179  Q
    ||||||| || |||||| ||||| | || ||||| || ||||||||||||||||||| | |||| |||||||||||||    
T  40676881 aacaaaagttaatgtatatgattaacaaattggactaaatacatccatttttgttgaccaaaatgtttcttataaata 40676804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 102 - 158
Target Start/End: Complemental strand, 3694069 - 3694013
Alignment:
Q  102 aacaaaaattgatgtatctgattcaaaatttggagtatatacatccatttttgttga 158  Q
    |||||||||| |||||| |||||||||||||| | || ||||||| |||| ||||||    
T  3694069 aacaaaaattaatgtatttgattcaaaatttgtattaaatacatcaatttatgttga 3694013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 148 - 180
Target Start/End: Original strand, 12043687 - 12043719
Alignment:
Q  148 atttttgttgatctaaatttttcttataaatag 180  Q
    |||||||||||| ||||||||||||||||||||    
T  12043687 atttttgttgatttaaatttttcttataaatag 12043719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 140 - 180
Target Start/End: Original strand, 23278077 - 23278117
Alignment:
Q  140 atacatccatttttgttgatctaaatttttcttataaatag 180  Q
    |||||| |||||||||||| |||||||| ||||||||||||    
T  23278077 atacattcatttttgttgacctaaatttctcttataaatag 23278117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 140 - 180
Target Start/End: Complemental strand, 34042750 - 34042710
Alignment:
Q  140 atacatccatttttgttgatctaaatttttcttataaatag 180  Q
    |||||| |||||||||||| |||||||| ||||||||||||    
T  34042750 atacattcatttttgttgacctaaatttctcttataaatag 34042710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 140 - 180
Target Start/End: Original strand, 44955282 - 44955322
Alignment:
Q  140 atacatccatttttgttgatctaaatttttcttataaatag 180  Q
    |||||| || ||||||||| |||||||||||||||||||||    
T  44955282 atacattcacttttgttgacctaaatttttcttataaatag 44955322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 140 - 180
Target Start/End: Complemental strand, 4790302 - 4790262
Alignment:
Q  140 atacatccatttttgttgatctaaatttttcttataaatag 180  Q
    |||||| |||||||||||| |||||||||||||||||||||    
T  4790302 atacattcatttttgttgacctaaatttttcttataaatag 4790262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 31; Significance: 0.00000006; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 140 - 182
Target Start/End: Complemental strand, 13043812 - 13043770
Alignment:
Q  140 atacatccatttttgttgatctaaatttttcttataaatagaa 182  Q
    |||||| |||||||||||| |||||||| ||||||||||||||    
T  13043812 atacattcatttttgttgacctaaatttctcttataaatagaa 13043770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 102 - 180
Target Start/End: Original strand, 35031039 - 35031117
Alignment:
Q  102 aacaaaaattgatgtatctgattcaaaatttggagtatatacatccatttttgttgatctaaatttttcttataaatag 180  Q
    |||||||||||||||||||  || ||||||  |   | |||||| || ||||||||| |||||||||||||||||||||    
T  35031039 aacaaaaattgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttttcttataaatag 35031117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 102 - 182
Target Start/End: Complemental strand, 24579935 - 24579855
Alignment:
Q  102 aacaaaaattgatgtatctgattcaaaatttggagtatatacatccatttttgttgatctaaatttttcttataaatagaa 182  Q
    |||||||||||||  || |  ||||||||||||| || ||| ||| |||||||| |||| |||| |||| |||||||||||    
T  24579935 aacaaaaattgataaattttgttcaaaatttggactaaatatatcaatttttgtcgatcaaaatgtttcatataaatagaa 24579855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 31; Significance: 0.00000006; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 94 - 180
Target Start/End: Complemental strand, 4444060 - 4443974
Alignment:
Q  94 tttagataaacaaaaattgatgtatctgattcaaaatttggagtatatacatccatttttgttgatctaaatttttcttataaatag 180  Q
    ||||||| ||||||| |||||||||||  || ||||||  |  || |||||| || ||||||||| |||||||| ||||||||||||    
T  4444060 tttagatcaacaaaagttgatgtatctatttaaaaattcagtctaaatacattcacttttgttgacctaaatttctcttataaatag 4443974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 140 - 180
Target Start/End: Original strand, 966224 - 966264
Alignment:
Q  140 atacatccatttttgttgatctaaatttttcttataaatag 180  Q
    |||||| |||||||||||||| |||||| ||||||||||||    
T  966224 atacattcatttttgttgatccaaatttctcttataaatag 966264  T

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Target: chr3 (Bit Score: 30; Significance: 0.0000002; HSPs: 3)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 151 - 180
Target Start/End: Complemental strand, 45093613 - 45093584
Alignment:
Q  151 tttgttgatctaaatttttcttataaatag 180  Q
    ||||||||||||||||||||||||||||||    
T  45093613 tttgttgatctaaatttttcttataaatag 45093584  T

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Target: chr3; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 102 - 134
Target Start/End: Original strand, 5237578 - 5237610
Alignment:
Q  102 aacaaaaattgatgtatctgattcaaaatttgg 134  Q
    ||||||||||||||||||| |||||||||||||    
T  5237578 aacaaaaattgatgtatctaattcaaaatttgg 5237610  T

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Target: chr3; HSP #3
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 140 - 180
Target Start/End: Complemental strand, 38964446 - 38964406
Alignment:
Q  140 atacatccatttttgttgatctaaatttttcttataaatag 180  Q
    |||||| || |||||||||||||||||| ||||||||||||    
T  38964446 atacattcacttttgttgatctaaatttctcttataaatag 38964406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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