View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11244_low_1 (Length: 733)

Name: NF11244_low_1
Description: NF11244
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11244_low_1
NF11244_low_1
[»] chr4 (71 HSPs)
chr4 (10-528)||(41401561-41402061)
chr4 (271-421)||(35787815-35787966)
chr4 (251-418)||(86802-86970)
chr4 (260-429)||(39592227-39592397)
chr4 (265-528)||(38370295-38370560)
chr4 (265-429)||(11094539-11094702)
chr4 (251-429)||(6616149-6616328)
chr4 (251-427)||(47668537-47668714)
chr4 (263-417)||(43894116-43894271)
chr4 (270-457)||(56000305-56000493)
chr4 (251-421)||(11114926-11115097)
chr4 (270-374)||(15787495-15787600)
chr4 (261-428)||(29663652-29663819)
chr4 (351-429)||(29687916-29687994)
chr4 (563-616)||(87096-87149)
chr4 (251-399)||(15786951-15787100)
chr4 (568-616)||(41401470-41401518)
chr4 (265-399)||(48207685-48207820)
chr4 (270-364)||(53400203-53400298)
chr4 (466-528)||(87004-87066)
chr4 (251-344)||(30682719-30682813)
chr4 (251-364)||(33377367-33377481)
chr4 (351-452)||(44302820-44302921)
chr4 (251-457)||(26393037-26393244)
chr4 (270-322)||(37559016-37559068)
chr4 (353-452)||(2293440-2293539)
chr4 (270-360)||(21104317-21104408)
chr4 (251-322)||(37560345-37560416)
chr4 (251-360)||(31711091-31711201)
chr4 (351-452)||(36604755-36604857)
chr4 (251-320)||(29686255-29686324)
chr4 (270-374)||(33376236-33376341)
chr4 (251-320)||(35789638-35789707)
chr4 (251-320)||(39590940-39591009)
chr4 (265-322)||(46796072-46796129)
chr4 (265-322)||(52658924-52658981)
chr4 (321-421)||(38418963-38419063)
chr4 (265-364)||(44128337-44128437)
chr4 (342-429)||(28102167-28102254)
chr4 (251-322)||(46794839-46794910)
chr4 (339-429)||(6140298-6140388)
chr4 (270-375)||(11113760-11113866)
chr4 (265-374)||(15446663-15446773)
chr4 (260-322)||(28103532-28103594)
chr4 (265-322)||(306590-306647)
chr4 (260-364)||(1273436-1273540)
chr4 (265-322)||(2310828-2310885)
chr4 (270-457)||(3533518-3533706)
chr4 (563-612)||(6140122-6140171)
chr4 (265-322)||(12396920-12396977)
chr4 (265-322)||(15445449-15445506)
chr4 (265-322)||(26376342-26376399)
chr4 (265-322)||(29833385-29833442)
chr4 (270-374)||(44304972-44305077)
chr4 (690-722)||(87202-87234)
chr4 (270-322)||(40143672-40143724)
chr4 (690-722)||(41401365-41401397)
chr4 (341-429)||(50530593-50530681)
chr4 (270-322)||(55953898-55953950)
chr4 (251-322)||(47667178-47667248)
chr4 (279-364)||(5688640-5688726)
chr4 (302-399)||(17319092-17319190)
chr4 (270-320)||(52981198-52981248)
chr4 (265-322)||(937144-937201)
chr4 (271-359)||(10403298-10403387)
chr4 (265-318)||(25764440-25764493)
chr4 (265-318)||(26107668-26107721)
chr4 (265-322)||(30683073-30683130)
chr4 (265-322)||(44690901-44690958)
chr4 (265-318)||(51949608-51949661)
chr4 (265-322)||(56001314-56001371)
[»] scaffold0045 (2 HSPs)
scaffold0045 (260-528)||(77019-77289)
scaffold0045 (563-616)||(76935-76988)
[»] chr3 (67 HSPs)
chr3 (251-528)||(19622004-19622281)
chr3 (251-429)||(53808317-53808496)
chr3 (251-528)||(25583113-25583388)
chr3 (265-421)||(11219443-11219600)
chr3 (270-421)||(39133035-39133187)
chr3 (270-420)||(8371238-8371389)
chr3 (251-421)||(17350048-17350219)
chr3 (270-421)||(26798852-26799004)
chr3 (265-374)||(7820403-7820513)
chr3 (251-364)||(42632705-42632819)
chr3 (351-452)||(7483440-7483541)
chr3 (265-364)||(11220661-11220761)
chr3 (271-374)||(19252995-19253099)
chr3 (251-322)||(41387479-41387550)
chr3 (350-429)||(47765537-47765616)
chr3 (260-358)||(49122011-49122110)
chr3 (265-374)||(47855331-47855441)
chr3 (251-364)||(54653969-54654083)
chr3 (265-322)||(8372662-8372719)
chr3 (285-429)||(12062322-12062467)
chr3 (351-452)||(32979188-32979289)
chr3 (351-420)||(34902941-34903010)
chr3 (262-370)||(47808103-47808212)
chr3 (270-322)||(10987699-10987751)
chr3 (251-322)||(5416197-5416268)
chr3 (251-322)||(53809539-53809610)
chr3 (339-421)||(23559907-23559989)
chr3 (563-616)||(19622318-19622371)
chr3 (265-322)||(41386143-41386200)
chr3 (251-363)||(42633890-42634003)
chr3 (265-322)||(51401397-51401454)
chr3 (371-450)||(48254806-48254885)
chr3 (265-396)||(51400228-51400360)
chr3 (260-322)||(43101902-43101964)
chr3 (265-322)||(19579233-19579290)
chr3 (351-421)||(31638218-31638290)
chr3 (265-322)||(32973152-32973209)
chr3 (265-322)||(32974269-32974326)
chr3 (270-374)||(32980445-32980550)
chr3 (265-322)||(33563962-33564019)
chr3 (285-417)||(35174332-35174465)
chr3 (265-322)||(35633240-35633297)
chr3 (265-322)||(48035370-48035427)
chr3 (265-322)||(52292607-52292664)
chr3 (265-322)||(52293569-52293626)
chr3 (265-322)||(53047910-53047967)
chr3 (273-364)||(29536735-29536827)
chr3 (270-322)||(39288485-39288537)
chr3 (270-322)||(47766997-47767048)
chr3 (270-322)||(53342734-53342786)
chr3 (251-322)||(47806817-47806888)
chr3 (251-322)||(55443596-55443667)
chr3 (265-311)||(5417105-5417151)
chr3 (265-311)||(40502272-40502318)
chr3 (251-321)||(49334384-49334454)
chr3 (272-322)||(52705354-52705404)
chr3 (261-306)||(1070092-1070137)
chr3 (265-322)||(2225070-2225127)
chr3 (265-322)||(7583483-7583540)
chr3 (265-322)||(19579340-19579397)
chr3 (370-407)||(24753462-24753499)
chr3 (265-322)||(39287483-39287540)
chr3 (265-318)||(42213459-42213512)
chr3 (265-326)||(42570025-42570086)
chr3 (380-429)||(42685008-42685057)
chr3 (265-322)||(48252946-48253003)
chr3 (265-322)||(53049083-53049140)
[»] chr1 (57 HSPs)
chr1 (251-429)||(9633774-9633953)
chr1 (251-421)||(26056093-26056264)
chr1 (265-449)||(49141414-49141599)
chr1 (251-426)||(52742917-52743093)
chr1 (251-429)||(21276993-21277172)
chr1 (251-429)||(44977220-44977399)
chr1 (260-429)||(13930613-13930783)
chr1 (292-429)||(14169659-14169797)
chr1 (353-421)||(51218912-51218980)
chr1 (251-452)||(50678365-50678563)
chr1 (251-364)||(25787167-25787281)
chr1 (351-429)||(27689383-27689461)
chr1 (265-362)||(42248310-42248408)
chr1 (251-363)||(25785967-25786080)
chr1 (321-421)||(14764299-14764399)
chr1 (251-374)||(47560138-47560262)
chr1 (329-429)||(51726782-51726882)
chr1 (251-389)||(14071181-14071320)
chr1 (251-420)||(23082073-23082243)
chr1 (251-364)||(47410983-47411097)
chr1 (270-374)||(13641275-13641380)
chr1 (351-420)||(22766767-22766836)
chr1 (351-420)||(37624517-37624586)
chr1 (271-358)||(26054916-26055004)
chr1 (270-364)||(47136690-47136785)
chr1 (257-370)||(52181302-52181416)
chr1 (260-364)||(3979316-3979421)
chr1 (265-429)||(13642495-13642660)
chr1 (351-420)||(30551536-30551605)
chr1 (265-364)||(14390271-14390371)
chr1 (251-334)||(49139800-49139884)
chr1 (342-429)||(8092689-8092776)
chr1 (280-374)||(9592266-9592361)
chr1 (251-322)||(13929294-13929365)
chr1 (292-394)||(36509851-36509954)
chr1 (260-322)||(48467269-48467331)
chr1 (265-322)||(2236826-2236883)
chr1 (265-322)||(34531676-34531733)
chr1 (265-322)||(35683068-35683125)
chr1 (261-322)||(40135383-40135444)
chr1 (261-322)||(48934250-48934311)
chr1 (265-322)||(48935156-48935213)
chr1 (563-611)||(49141243-49141291)
chr1 (251-369)||(3978043-3978162)
chr1 (292-394)||(19466178-19466281)
chr1 (270-320)||(28999858-28999908)
chr1 (270-320)||(33793797-33793847)
chr1 (467-509)||(49141351-49141393)
chr1 (270-311)||(1061509-1061550)
chr1 (265-322)||(2238024-2238081)
chr1 (265-318)||(7204234-7204287)
chr1 (265-322)||(9123445-9123502)
chr1 (265-322)||(34532748-34532805)
chr1 (265-322)||(38458099-38458156)
chr1 (265-322)||(42244517-42244574)
chr1 (265-322)||(50679867-50679924)
chr1 (265-322)||(51424264-51424321)
[»] chr8 (56 HSPs)
chr8 (270-428)||(117066-117225)
chr8 (267-429)||(7486092-7486255)
chr8 (251-429)||(36756063-36756242)
chr8 (270-420)||(39546624-39546775)
chr8 (321-528)||(36938751-36938956)
chr8 (351-452)||(44103210-44103312)
chr8 (285-429)||(13366988-13367133)
chr8 (273-427)||(44606160-44606315)
chr8 (351-421)||(21961923-21961993)
chr8 (265-457)||(24069356-24069549)
chr8 (251-452)||(37276158-37276360)
chr8 (260-429)||(37324626-37324796)
chr8 (251-388)||(37472402-37472540)
chr8 (270-429)||(12281718-12281877)
chr8 (270-429)||(36070196-36070356)
chr8 (351-429)||(10052204-10052282)
chr8 (265-421)||(35943920-35944078)
chr8 (265-457)||(39515212-39515405)
chr8 (351-452)||(13513520-13513621)
chr8 (351-452)||(13603053-13603154)
chr8 (265-421)||(19913505-19913662)
chr8 (351-452)||(21670164-21670265)
chr8 (251-374)||(36940026-36940150)
chr8 (352-426)||(21267233-21267307)
chr8 (251-364)||(31623905-31624019)
chr8 (351-420)||(13363525-13363594)
chr8 (265-364)||(45385797-45385897)
chr8 (257-399)||(16363780-16363923)
chr8 (270-364)||(31625387-31625482)
chr8 (251-364)||(38591010-38591124)
chr8 (265-322)||(24068343-24068400)
chr8 (265-322)||(43386748-43386805)
chr8 (321-429)||(20308675-20308783)
chr8 (321-429)||(21095308-21095416)
chr8 (370-414)||(39325787-39325831)
chr8 (321-421)||(41522634-41522734)
chr8 (268-374)||(37274903-37275010)
chr8 (292-429)||(8095386-8095524)
chr8 (251-320)||(10053792-10053861)
chr8 (563-616)||(36938986-36939039)
chr8 (251-322)||(37323347-37323418)
chr8 (265-322)||(19914952-19915009)
chr8 (467-524)||(38789254-38789311)
chr8 (251-315)||(7487440-7487504)
chr8 (270-322)||(21267182-21267234)
chr8 (251-315)||(35945490-35945554)
chr8 (356-408)||(45541589-45541641)
chr8 (251-322)||(39249-39320)
chr8 (251-322)||(41867962-41868033)
chr8 (351-429)||(2421231-2421309)
chr8 (327-429)||(45194559-45194661)
chr8 (265-322)||(37998-38055)
chr8 (265-310)||(4807379-4807424)
chr8 (261-322)||(7815052-7815113)
chr8 (265-322)||(14820206-14820263)
chr8 (270-358)||(29739652-29739741)
[»] chr7 (64 HSPs)
chr7 (251-417)||(38406017-38406184)
chr7 (260-429)||(14109009-14109177)
chr7 (260-429)||(14418966-14419134)
chr7 (279-429)||(40930445-40930596)
chr7 (260-447)||(43930327-43930514)
chr7 (270-397)||(4857219-4857347)
chr7 (284-528)||(26406157-26406400)
chr7 (251-374)||(40926512-40926636)
chr7 (352-452)||(24494966-24495066)
chr7 (279-429)||(46458651-46458802)
chr7 (339-421)||(4167539-4167621)
chr7 (265-360)||(19279619-19279715)
chr7 (251-429)||(25154874-25155053)
chr7 (270-374)||(14206691-14206796)
chr7 (270-374)||(14215381-14215486)
chr7 (251-374)||(14107831-14107955)
chr7 (251-374)||(14417788-14417912)
chr7 (265-420)||(19848781-19848937)
chr7 (251-370)||(22744745-22744865)
chr7 (265-450)||(45719628-45719814)
chr7 (271-368)||(7146799-7146896)
chr7 (265-420)||(18801228-18801384)
chr7 (251-322)||(33458309-33458380)
chr7 (251-322)||(33459589-33459660)
chr7 (251-364)||(22746323-22746437)
chr7 (265-374)||(43935198-43935308)
chr7 (265-374)||(43936133-43936243)
chr7 (251-374)||(4858337-4858461)
chr7 (251-358)||(25153657-25153765)
chr7 (563-615)||(25533108-25533160)
chr7 (270-322)||(45721812-45721864)
chr7 (251-322)||(18802435-18802506)
chr7 (251-322)||(43006384-43006455)
chr7 (274-368)||(46673512-46673606)
chr7 (270-364)||(46674937-46675032)
chr7 (271-364)||(48754015-48754109)
chr7 (265-322)||(17288266-17288323)
chr7 (265-322)||(30224022-30224079)
chr7 (265-322)||(36673882-36673939)
chr7 (265-322)||(41616637-41616694)
chr7 (286-322)||(2904093-2904129)
chr7 (265-364)||(7148061-7148161)
chr7 (251-362)||(19278352-19278464)
chr7 (292-399)||(27899182-27899290)
chr7 (251-322)||(22061841-22061912)
chr7 (339-390)||(35315199-35315250)
chr7 (367-429)||(10256239-10256301)
chr7 (285-426)||(24872024-24872165)
chr7 (265-311)||(30222659-30222705)
chr7 (265-311)||(34558358-34558404)
chr7 (265-311)||(41618556-41618602)
chr7 (260-322)||(43007695-43007757)
chr7 (251-313)||(44114711-44114772)
chr7 (261-322)||(17287083-17287144)
chr7 (265-322)||(21171532-21171589)
chr7 (270-358)||(24873606-24873695)
chr7 (270-311)||(28325090-28325131)
chr7 (265-322)||(38001517-38001574)
chr7 (265-322)||(41126252-41126309)
chr7 (270-311)||(41127228-41127269)
chr7 (270-311)||(41516401-41516442)
chr7 (467-528)||(43930533-43930594)
chr7 (265-322)||(45089485-45089541)
chr7 (265-322)||(48755594-48755651)
[»] chr6 (30 HSPs)
chr6 (251-429)||(33801955-33802134)
chr6 (279-429)||(293578-293729)
chr6 (251-421)||(18139433-18139604)
chr6 (265-421)||(31738376-31738533)
chr6 (321-429)||(14328712-14328820)
chr6 (321-429)||(14421722-14421830)
chr6 (251-370)||(8411085-8411205)
chr6 (251-429)||(27440113-27440292)
chr6 (251-360)||(5311278-5311388)
chr6 (270-374)||(33807707-33807812)
chr6 (270-374)||(22299896-22300001)
chr6 (251-374)||(27438789-27438913)
chr6 (265-360)||(31740279-31740375)
chr6 (265-399)||(9927619-9927753)
chr6 (370-417)||(13507121-13507168)
chr6 (251-364)||(8412319-8412433)
chr6 (261-322)||(8447230-8447291)
chr6 (261-322)||(8456034-8456095)
chr6 (265-429)||(22298617-22298782)
chr6 (270-322)||(18773672-18773724)
chr6 (270-322)||(28226464-28226516)
chr6 (351-421)||(2130883-2130953)
chr6 (260-328)||(683579-683648)
chr6 (265-322)||(2138683-2138740)
chr6 (265-318)||(7829420-7829473)
chr6 (265-322)||(13173050-13173107)
chr6 (265-322)||(19367730-19367787)
chr6 (265-322)||(19368564-19368621)
chr6 (265-322)||(26584083-26584140)
chr6 (265-322)||(28225437-28225494)
[»] chr2 (54 HSPs)
chr2 (265-421)||(12852899-12853056)
chr2 (260-528)||(28109711-28109977)
chr2 (265-429)||(29424550-29424715)
chr2 (292-429)||(14509249-14509387)
chr2 (251-418)||(23177672-23177841)
chr2 (251-418)||(23588929-23589098)
chr2 (351-421)||(14714592-14714662)
chr2 (265-429)||(37868978-37869143)
chr2 (251-429)||(7036965-7037144)
chr2 (342-421)||(7983641-7983720)
chr2 (270-431)||(4829483-4829645)
chr2 (351-452)||(4512206-4512307)
chr2 (352-452)||(26205114-26205214)
chr2 (270-421)||(35799530-35799682)
chr2 (260-450)||(3528182-3528373)
chr2 (251-322)||(11575501-11575572)
chr2 (366-420)||(45047457-45047511)
chr2 (270-429)||(10367257-10367417)
chr2 (270-429)||(12959643-12959803)
chr2 (351-429)||(21010436-21010514)
chr2 (336-421)||(3532279-3532364)
chr2 (251-322)||(41795998-41796069)
chr2 (265-322)||(3255924-3255981)
chr2 (265-322)||(3665237-3665294)
chr2 (265-322)||(6706939-6706996)
chr2 (351-420)||(41296401-41296470)
chr2 (251-374)||(23178875-23178999)
chr2 (251-374)||(23590132-23590256)
chr2 (251-322)||(7038378-7038449)
chr2 (251-322)||(37867755-37867826)
chr2 (260-322)||(2581811-2581873)
chr2 (351-429)||(11575424-11575502)
chr2 (351-429)||(25570808-25570886)
chr2 (257-322)||(3666314-3666379)
chr2 (265-318)||(7182428-7182481)
chr2 (265-322)||(42027206-42027263)
chr2 (265-322)||(42246604-42246661)
chr2 (270-311)||(42368365-42368406)
chr2 (270-322)||(2305558-2305610)
chr2 (292-427)||(7490135-7490271)
chr2 (274-322)||(21012126-21012174)
chr2 (270-322)||(33836787-33836839)
chr2 (378-425)||(6708921-6708968)
chr2 (267-322)||(11386639-11386694)
chr2 (265-334)||(2583579-2583649)
chr2 (265-311)||(14573865-14573911)
chr2 (265-322)||(2306707-2306763)
chr2 (265-322)||(4630130-4630187)
chr2 (266-311)||(6209121-6209166)
chr2 (265-322)||(12854150-12854207)
chr2 (265-318)||(18904708-18904761)
chr2 (265-322)||(30202929-30202986)
chr2 (265-310)||(42249846-42249891)
chr2 (265-318)||(45001131-45001184)
[»] scaffold0084 (1 HSPs)
scaffold0084 (270-421)||(13150-13302)
[»] chr5 (52 HSPs)
chr5 (251-429)||(5382941-5383120)
chr5 (270-429)||(40058036-40058196)
chr5 (251-429)||(19525226-19525405)
chr5 (260-429)||(12933759-12933929)
chr5 (260-429)||(12947920-12948090)
chr5 (265-421)||(18693711-18693868)
chr5 (265-421)||(21387650-21387807)
chr5 (270-407)||(7345350-7345488)
chr5 (368-429)||(7426758-7426819)
chr5 (251-358)||(18677975-18678083)
chr5 (266-421)||(38471303-38471459)
chr5 (251-322)||(12936148-12936219)
chr5 (251-315)||(41905174-41905238)
chr5 (251-322)||(12950306-12950377)
chr5 (260-358)||(19523991-19524089)
chr5 (263-363)||(26403318-26403419)
chr5 (270-357)||(27894033-27894121)
chr5 (257-374)||(40059321-40059439)
chr5 (285-394)||(42510147-42510257)
chr5 (270-374)||(15613523-15613628)
chr5 (251-374)||(1273088-1273212)
chr5 (279-374)||(42979475-42979571)
chr5 (265-370)||(8762397-8762503)
chr5 (563-613)||(32734437-32734487)
chr5 (265-322)||(224636-224693)
chr5 (265-322)||(1273386-1273443)
chr5 (265-322)||(4568020-4568077)
chr5 (251-320)||(6629730-6629799)
chr5 (351-428)||(12830877-12830954)
chr5 (351-428)||(12862857-12862934)
chr5 (269-322)||(22650674-22650727)
chr5 (251-358)||(19827149-19827257)
chr5 (270-322)||(20991695-20991747)
chr5 (370-429)||(2167453-2167512)
chr5 (251-322)||(5975755-5975826)
chr5 (265-363)||(15614964-15615063)
chr5 (292-374)||(15857611-15857694)
chr5 (269-374)||(42980702-42980808)
chr5 (265-322)||(326357-326414)
chr5 (265-322)||(5061041-5061098)
chr5 (265-318)||(6131942-6131995)
chr5 (265-306)||(6132002-6132043)
chr5 (321-370)||(10084668-10084717)
chr5 (265-306)||(14858454-14858495)
chr5 (265-322)||(15509208-15509265)
chr5 (265-322)||(15510309-15510366)
chr5 (265-322)||(19050762-19050819)
chr5 (251-312)||(19825873-19825934)
chr5 (265-322)||(20988703-20988760)
chr5 (265-306)||(22803469-22803510)
chr5 (265-318)||(22803517-22803570)
chr5 (265-318)||(37812309-37812362)
[»] scaffold0025 (1 HSPs)
scaffold0025 (260-429)||(56638-56808)
[»] scaffold0015 (1 HSPs)
scaffold0015 (351-421)||(207744-207814)
[»] scaffold1974 (1 HSPs)
scaffold1974 (251-418)||(577-745)
[»] scaffold1878 (1 HSPs)
scaffold1878 (251-418)||(529-697)
[»] scaffold0290 (2 HSPs)
scaffold0290 (251-418)||(9427-9595)
scaffold0290 (251-320)||(8378-8447)
[»] scaffold0098 (1 HSPs)
scaffold0098 (321-421)||(40978-41078)
[»] scaffold0003 (2 HSPs)
scaffold0003 (251-429)||(47069-47248)
scaffold0003 (251-374)||(48449-48573)
[»] scaffold0051 (1 HSPs)
scaffold0051 (270-420)||(39848-39999)
[»] scaffold0178 (1 HSPs)
scaffold0178 (265-322)||(2311-2368)
[»] scaffold0046 (2 HSPs)
scaffold0046 (265-322)||(23419-23476)
scaffold0046 (265-322)||(24861-24918)
[»] scaffold2127 (1 HSPs)
scaffold2127 (270-364)||(518-613)
[»] scaffold0024 (1 HSPs)
scaffold0024 (251-311)||(73043-73103)
[»] scaffold0369 (1 HSPs)
scaffold0369 (270-368)||(12928-13027)
[»] scaffold0122 (1 HSPs)
scaffold0122 (342-429)||(16036-16123)
[»] scaffold0038 (2 HSPs)
scaffold0038 (270-322)||(26962-27014)
scaffold0038 (265-322)||(25935-25992)
[»] scaffold0013 (1 HSPs)
scaffold0013 (251-322)||(96159-96230)
[»] scaffold0687 (1 HSPs)
scaffold0687 (261-322)||(6610-6671)
[»] scaffold0630 (1 HSPs)
scaffold0630 (265-322)||(3098-3155)
[»] scaffold0177 (1 HSPs)
scaffold0177 (265-322)||(1768-1825)
[»] scaffold0155 (1 HSPs)
scaffold0155 (265-322)||(5182-5239)
[»] scaffold0007 (1 HSPs)
scaffold0007 (270-370)||(145866-145967)


Alignment Details
Target: chr4 (Bit Score: 390; Significance: 0; HSPs: 71)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 390; E-Value: 0
Query Start/End: Original strand, 10 - 528
Target Start/End: Complemental strand, 41402061 - 41401561
Alignment:
Q  10 catagcgataggtttgtcttttacttattttcacaattttacttatatacaagaacaataatgaacgaaccactccaaaataaaataaaaatatacaaca 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41402061 catagcgataggtttgtcttttacttattttcacaattttacttatatacaagaacaataatgaacgaaccactccaaaataaaataaaaatatacaaca 41401962  T
Q  110 ttattacaagtactgcacgatagaggtggtgtgtcactccttaagaatttgattgggagataagtttaaaggggaatagagaaaaatagaagcaacaaaa 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  41401961 ttattacaagtactgcacgatagaggtggtgtgtcactccttaagaatttgattgggagataagtttaaaggggaatagaggaaaatagaagcaacaaaa 41401862  T
Q  210 atttctatagtggtaggttttatgacacagtcggttatagataattcataatttagtcctttaacttacttttggttttcattttggtcccctaactata 309  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| | ||||||    
T  41401861 atttctatagtagtaggttttatgacacagtcggttatagataattcataatttagtcctttaacttacttttggtttttactttggtcccttgactata 41401762  T
Q  310 aaatgtttcaattggtcttataaatattttgtcgtttaccgttttggtcctctccattaatttttaacatcaaatgtctaaggtgaaccatgtttaaagg 409  Q
    |||| ||||||||||||| ||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||                 ||    
T  41401761 aaatatttcaattggtctcataaatattttttcgtttaccgttttgatcctctccattaatttttaacatcaaatgtctaa-----------------gg 41401679  T
Q  410 tggtccaccataaaccttataagttcatttaattttaaccattcgatannnnnnnncaaaaagagaaccgtttgatcatataagtatgttgtatcttacg 509  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||    
T  41401678 tggtccaccataaaccttataaattcatttaattttaaccattcgata-tttttttcaaaaagagaaccgtttgatcatataagtatgttgtatcttacg 41401580  T
Q  510 atgaactatcaacacctaa 528  Q
    |||||||||||||||||||    
T  41401579 atgaactatcaacacctaa 41401561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 271 - 421
Target Start/End: Original strand, 35787815 - 35787966
Alignment:
Q  271 taacttacttttggttttcattttggtcccctaactataaaatgtttcaatt-ggtcttataaatattttgtcgtttaccgttttggtcctctccattaa 369  Q
    ||||||| |||||||||||| |||||||| |||||||||||||||||||||| ||||  |||||| || |||||||||||||||||||||||||| |||     
T  35787815 taacttatttttggttttcactttggtcctctaactataaaatgtttcaatttggtcccataaatcttctgtcgtttaccgttttggtcctctccgttag 35787914  T
Q  370 tttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccata 421  Q
    |||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  35787915 tttttaacatcaaatgtctaaggtaaatcatgtttaaaggtggtccaccata 35787966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 251 - 418
Target Start/End: Original strand, 86802 - 86970
Alignment:
Q  251 taattcataatttagtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt-ggtcttataaatattttgtcgtttacc 349  Q
    |||| ||| ||||||||  |||| ||| |||| ||||||| |||||| |||||||||||||   | |||||| ||||  ||||||||| || |||||||     
T  86802 taatacatcatttagtctcttaatttatttttagttttcactttggttccctaactataaagcatctcaatttggtcccataaatattctgccgtttact 86901  T
Q  350 gttttggtcctctccattaatttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccacc 418  Q
    ||||||||| ||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  86902 gttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccacc 86970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 260 - 429
Target Start/End: Complemental strand, 39592397 - 39592227
Alignment:
Q  260 atttagtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaa-ttggtcttataaatattttgtcgtttaccgttttggtc 358  Q
    |||| |||| |||||||| |||  ||||||| ||| |||||||||||||||| ||| |||| ||||||   ||  | || |||||||||| ||||||||     
T  39592397 atttggtcccttaacttattttatgttttcactttagtcccctaactataaagtgtctcaaattggtccattatgtcttctgtcgtttactgttttggtt 39592298  T
Q  359 ctctccattaatttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccataaaccttat 429  Q
    |||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| |||| |||||||    
T  39592297 ctctccgttaatttttaacatcaaatgtctaaggtgagccatgtttaaaggtggtccatcatataccttat 39592227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 265 - 528
Target Start/End: Original strand, 38370295 - 38370560
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt-ggtcttataaatattttgtcgtttaccgttttggtcctctc 363  Q
    |||| |||||||| ||||  |||||| |||||||  ||||| ||||| ||| |||||| ||||| |||| | || ||||||||||| |||||||| ||||    
T  38370295 gtcccttaacttatttttcattttcaatttggtcatctaacgataaagtgtatcaatttggtctcataactcttctgtcgtttaccattttggtcatctc 38370394  T
Q  364 cattaatttttaacatcaaa-tgtctaaggtgaaccatgtttaaaggtggtccaccataaaccttataagttcatttaattttaaccattcgatannnnn 462  Q
    | ||| |||||||| | ||| || |||||||||||||  |||  ||||||||||||||| | ||||||| ||||||||||||||||| || ||||         
T  38370395 cgttagtttttaaccttaaaatgactaaggtgaaccaactttgtaggtggtccaccatagatcttataaattcatttaattttaaccctttgatattttt 38370494  T
Q  463 nnncaaaaagagaaccgtttgatcatataagtatgttgtatcttacgatgaactatcaacacctaa 528  Q
        ||||||||||| ||| ||||||||| || ||||||||| |||| ||||| ||||||||||||    
T  38370495 tttaaaaaagagaactgttggatcatatatgtctgttgtatcatacggtgaacaatcaacacctaa 38370560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 265 - 429
Target Start/End: Original strand, 11094539 - 11094702
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt-ggtcttataaatattttgtcgtttaccgttttggtcctctc 363  Q
    ||||||||| ||| |||||||||| | ||||||| |||||||||||| ||| | |||| |||| ||||||| || || ||||||| |||||||||||||     
T  11094539 gtcctttaatttatttttggtttttactttggtctcctaactataaagtgtcttaatttggtcctataaattttctgccgtttactgttttggtcctctt 11094638  T
Q  364 cattaatttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccataaaccttat 429  Q
    | ||| ||||||||||||||||||||||||  |||||||||||| ||||| ||||||| |||||||    
T  11094639 cgttagtttttaacatcaaatgtctaaggt--accatgtttaaatgtggttcaccatagaccttat 11094702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 251 - 429
Target Start/End: Complemental strand, 6616328 - 6616149
Alignment:
Q  251 taattcataatttagtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaa-ttggtcttataaatattttgtcgtttacc 349  Q
    |||| ||| |||| |||| |||||||| |||  ||||||| |||||||||||||||||||| ||| |||| ||||||   || ||||| |||||||||      
T  6616328 taatacatcatttggtcccttaacttattttccgttttcactttggtcccctaactataaagtgtctcaaattggtcccttatatattctgtcgtttatt 6616229  T
Q  350 gttttggtcctctccattaatttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccataaaccttat 429  Q
    ||||||||||||||| ||| |||||||||||||||||| ||||||||| ||| |||||| | |||||| ||| |||||||    
T  6616228 gttttggtcctctcctttagtttttaacatcaaatgtcaaaggtgaacaatgattaaagatagtccactatagaccttat 6616149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 251 - 427
Target Start/End: Complemental strand, 47668714 - 47668537
Alignment:
Q  251 taattcataatttagtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaa-ttggtcttataaatattttgtcgtttacc 349  Q
    |||| ||| |||| ||||||||||||| |||  ||||||| |||||||||||||||||||| ||| |||| ||||||   || ||  | || ||||||      
T  47668714 taatacatcatttggtcctttaacttattttctgttttcactttggtcccctaactataaagtgtctcaaattggtcccttatatcatctgccgtttatt 47668615  T
Q  350 gttttggtcctctccattaatttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccataaacctt 427  Q
    ||||||||||||||  ||| ||||||||||||||| |||||||| ||||||| |||||| |||||||||||| |||||    
T  47668614 gttttggtcctctctgttagtttttaacatcaaatatctaaggtaaaccatggttaaagatggtccaccatagacctt 47668537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 263 - 417
Target Start/End: Original strand, 43894116 - 43894271
Alignment:
Q  263 tagtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaa-ttggtcttataaatattttgtcgtttacc-gttttggtcct 360  Q
    |||||| |||||||| |||||||||||| |||||||||||||||||||||||| |||| ||||||  |||| |||||| ||  |||||  |||||||| |    
T  43894116 tagtcccttaacttatttttggttttcagtttggtcccctaactataaaatgtctcaatttggtcacataactatttt-tctgttacctcttttggtcat 43894214  T
Q  361 ctccattaatttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccac 417  Q
     ||| ||  ||||||||||||||||||| ||||||||||| ||||||| ||||||||    
T  43894215 atccgttggtttttaacatcaaatgtctgaggtgaaccatatttaaagatggtccac 43894271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 270 - 457
Target Start/End: Original strand, 56000305 - 56000493
Alignment:
Q  270 ttaacttacttttggttttcattttggtcccctaactataaaatgtttcaa-ttggtcttataaatattttgtcgtttaccgttttggtcctctccatta 368  Q
    |||||||| ||||| ||||||||||| ||||||||||||||| ||| |||| || ||| ||||| | || || |||||||| |||||||| | ||||| |    
T  56000305 ttaacttatttttgattttcattttgatcccctaactataaagtgtctcaatttagtcctataactcttctgccgtttaccattttggtcttttccatca 56000404  T
Q  369 atttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccataaacctta-taagttcatttaattttaaccattcgata 457  Q
     |||||||||  |||||||||||||| ||||   ||| |||||||||||| || |||||| ||||||  |||||||||||||||| ||||    
T  56000405 gtttttaacactaaatgtctaaggtggaccaacattataggtggtccaccgtagaccttactaagtt-ttttaattttaaccatttgata 56000493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 251 - 421
Target Start/End: Complemental strand, 11115097 - 11114926
Alignment:
Q  251 taattcataatttagtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt-ggtcttataaatattttgtcgtttacc 349  Q
    |||| ||| |||| |||| |||||||| |||  |||||||||||||||||||||||||||| | | |||||| ||||  |||| | || |||||||||||    
T  11115097 taatacatcatttggtcccttaacttattttcagttttcattttggtcccctaactataaagtatctcaatttggtcccataactcttctgtcgtttacc 11114998  T
Q  350 gttttggtcctctccattaatttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccata 421  Q
     |||||| ||||||| ||| |||||||| | ||||||||||| |||||||  |||  |||||||| ||||||    
T  11114997 attttggacctctccgttagtttttaaccttaaatgtctaagctgaaccaactttgtaggtggtctaccata 11114926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 270 - 374
Target Start/End: Complemental strand, 15787600 - 15787495
Alignment:
Q  270 ttaacttacttttggttttcattttggtcccctaactataaaatgtttcaa-ttggtcttataaatattttgtcgtttaccgttttggtcctctccatta 368  Q
    |||| ||| |||| |||||||||||||||||||||||||||| ||| |||| ||||||  |||| | ||||| |||||||| ||||||||||||||||||    
T  15787600 ttaatttattttttgttttcattttggtcccctaactataaagtgtctcaatttggtcccataacttttttgccgtttaccattttggtcctctccatta 15787501  T
Q  369 attttt 374  Q
    ||||||    
T  15787500 attttt 15787495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 261 - 428
Target Start/End: Original strand, 29663652 - 29663819
Alignment:
Q  261 tttagtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt-ggtcttataaatattttgtcgtttaccgttttggtcc 359  Q
    |||| ||| |||| ||| ||||||||||||||||| |||| |||||||||| ||| |||||| ||||  |||| | || || |||||||| ||||| ||     
T  29663652 tttaatcccttaatttatttttggttttcattttgatccc-taactataaattgtctcaatttggtcccataactcttctgccgtttaccattttgatct 29663750  T
Q  360 tctccattaatttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccataaacctta 428  Q
    | ||| || | ||||||||| |||||||||||||||||||   ||| ||||||||||||||||||||||    
T  29663751 tttccgtttaattttaacattaaatgtctaaggtgaaccaacattataggtggtccaccataaacctta 29663819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 351 - 429
Target Start/End: Complemental strand, 29687994 - 29687916
Alignment:
Q  351 ttttggtcctctccattaatttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccataaaccttat 429  Q
    |||||||| ||||| ||| |||||||||||||||||||| || ||||||| ||||||||||||||||| ||||||||||    
T  29687994 ttttggtcatctcctttagtttttaacatcaaatgtctacggcgaaccatatttaaaggtggtccaccgtaaaccttat 29687916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 563 - 616
Target Start/End: Original strand, 87096 - 87149
Alignment:
Q  563 tcatctccttcatcaacacattcatactctttagtcaattttcatataacccag 616  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  87096 tcatctccttcatcaacacattcatactccttagtcaattttcatataacccag 87149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 251 - 399
Target Start/End: Original strand, 15786951 - 15787100
Alignment:
Q  251 taattcataatttagtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaa-ttggtcttataaatattttgtcgtttacc 349  Q
    |||| ||| |||| |||| |||||||| |||| |||||||||||| ||||||||||||||| ||| |||| ||||||  |||| | || || |||||| |    
T  15786951 taatacatcatttggtccattaacttattttttgttttcattttgttcccctaactataaactgtctcaatttggtcccataacttttctgccgtttatc 15787050  T
Q  350 gttttggtcctctccattaatttttaacatcaaatgtctaaggtgaacca 399  Q
     || || |||||||| |||||||||||| | |||||||||||||| ||||    
T  15787051 attatgatcctctccgttaatttttaaccttaaatgtctaaggtgcacca 15787100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 568 - 616
Target Start/End: Complemental strand, 41401518 - 41401470
Alignment:
Q  568 tccttcatcaacacattcatactctttagtcaattttcatataacccag 616  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  41401518 tccttcatcaacacattcatactccttagtcaattttcatataacccag 41401470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 265 - 399
Target Start/End: Complemental strand, 48207820 - 48207685
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaa-ttggtcttataaatattttgtcgtttaccgttttggtcctctc 363  Q
    ||||||||||||| |||| ||||||||||||||| ||||| |||||| ||| |||| |||||| ||||| | || |  |||||||  || |||||| |||    
T  48207820 gtcctttaacttattttttgttttcattttggtctcctaattataaagtgtctcaatttggtcatataactcttctaccgtttacaattgtggtcccctc 48207721  T
Q  364 cattaatttttaacatcaaatgtctaaggtgaacca 399  Q
      ||| |||||||| | |||||||||||||||||||    
T  48207720 tgttattttttaaccttaaatgtctaaggtgaacca 48207685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 270 - 364
Target Start/End: Original strand, 53400203 - 53400298
Alignment:
Q  270 ttaacttacttttggttttcattttggtcccctaactataaaatgtttcaa-ttggtcttataaatattttgtcgtttaccgttttggtcctctcc 364  Q
    |||||||| |||| | ||||||||||||||| |||||||||| ||| |||| |||||| ||||||| || ||||||||||| |||| |||||||||    
T  53400203 ttaacttatttttagatttcattttggtcccataactataaagtgtctcaatttggtcctataaatcttatgtcgtttaccattttagtcctctcc 53400298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 466 - 528
Target Start/End: Original strand, 87004 - 87066
Alignment:
Q  466 caaaaagagaaccgtttgatcatataagtatgttgtatcttacgatgaactatcaacacctaa 528  Q
    |||||||||||||||| |||||| ||||| |||||||||||||||| |||||||||| |||||    
T  87004 caaaaagagaaccgttggatcatttaagtctgttgtatcttacgataaactatcaacgcctaa 87066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 251 - 344
Target Start/End: Original strand, 30682719 - 30682813
Alignment:
Q  251 taattcataatttagtcctttaacttacttttggttttcattttggtcccctaactataaaatgt-ttcaattggtcttataaatattttgtcgt 344  Q
    |||| |||||||| |||| |||||||| |||| ||||||||||||||||| |||||||||| ||| || | |||||||||||||| || ||||||    
T  30682719 taatacataatttggtcccttaacttatttttagttttcattttggtcccttaactataaagtgtcttaatttggtcttataaatcttctgtcgt 30682813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 251 - 364
Target Start/End: Complemental strand, 33377481 - 33377367
Alignment:
Q  251 taattcataatttagtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaa-ttggtcttataaatattttgtcgtttacc 349  Q
    |||| ||| |||| |||| |||||||| ||||| |||||| |||||||||||||||||||| ||| |||| ||||||  |||||| || || |||||||     
T  33377481 taatacatcatttggtcccttaacttatttttgattttcaatttggtcccctaactataaagtgtctcaatttggtcccataaatcttctgccgtttact 33377382  T
Q  350 gttttggtcctctcc 364  Q
     ||||||||||||||    
T  33377381 attttggtcctctcc 33377367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 351 - 452
Target Start/End: Original strand, 44302820 - 44302921
Alignment:
Q  351 ttttggtcctctccattaatttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccataaaccttataagttcatttaattttaacca 450  Q
    |||||||||||||| ||| |||||||||| ||| | ||||||||||| || |||||||||||| ||||||| ||| ||| |  |  ||||||||||||||    
T  44302820 ttttggtcctctccgttagtttttaacattaaaagactaaggtgaactatatttaaaggtggttcaccatagaccgtattaaattttttaattttaacca 44302919  T
Q  451 tt 452  Q
    ||    
T  44302920 tt 44302921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 251 - 457
Target Start/End: Complemental strand, 26393244 - 26393037
Alignment:
Q  251 taattcataatttagtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt-ggtcttataaatattttgtcgtttacc 349  Q
    |||| ||| |||| |||| |||||||| ||||  |||| |||||| |||  |||||||||| ||| |||||| ||||  |||| | || |||||||||||    
T  26393244 taatacatgatttggtcccttaacttattttttatttttattttgatcctttaactataaagtgtctcaatttggtcccataactcttctgtcgtttacc 26393145  T
Q  350 gttttggtcctctccattaatttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccataaacctta-taagttcatttaattttaac 448  Q
     |||||| |   ||| |   |||||||||  |||||||||||||||||||   ||| ||||||||||||||| |||||| ||||||  ||||||||||||    
T  26393144 attttggacacttccgtctgtttttaacactaaatgtctaaggtgaaccaacattataggtggtccaccatagaccttactaagtt-ttttaattttaac 26393046  T
Q  449 cattcgata 457  Q
    |||| ||||    
T  26393045 catttgata 26393037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 270 - 322
Target Start/End: Original strand, 37559016 - 37559068
Alignment:
Q  270 ttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    |||||||| |||||||||||| |||||||||||||||||||||||| ||||||    
T  37559016 ttaacttatttttggttttcaatttggtcccctaactataaaatgtctcaatt 37559068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 353 - 452
Target Start/End: Complemental strand, 2293539 - 2293440
Alignment:
Q  353 ttggtcctctccattaatttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccataaaccttataagttcatttaattttaaccatt 452  Q
    |||||||||||| ||| ||||||| ||||||||||| | ||||| ||| ||||||| ||||||||||||  |||||| |  |  ||||||||||||||||    
T  2293539 ttggtcctctccgttagtttttaaaatcaaatgtctgaagtgaatcatatttaaagatggtccaccatatgccttattaaattttttaattttaaccatt 2293440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 270 - 360
Target Start/End: Complemental strand, 21104408 - 21104317
Alignment:
Q  270 ttaacttacttttggttttcattttggtcccctaactataaaatgtttcaa-ttggtcttataaatattttgtcgtttaccgttttggtcct 360  Q
    |||| ||| |||| |||||||||||||||||||||||||||| ||| |||| ||||||| |||  | || ||||||||||| ||||||||||    
T  21104408 ttaaattattttttgttttcattttggtcccctaactataaagtgtctcaatttggtctcatatgtcttctgtcgtttaccattttggtcct 21104317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 251 - 322
Target Start/End: Complemental strand, 37560416 - 37560345
Alignment:
Q  251 taattcataatttagtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    |||| ||| |||| |||| |||||||| |||||||||||| |||||||||||||||||||| ||| ||||||    
T  37560416 taatacatcatttggtcccttaacttatttttggttttcaatttggtcccctaactataaagtgtctcaatt 37560345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 251 - 360
Target Start/End: Original strand, 31711091 - 31711201
Alignment:
Q  251 taattcataatttagtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaa-ttggtcttataaatattttgtcgtttacc 349  Q
    |||| ||| |||| |||| |||||||| |||||| ||||||||||||||  |||||||||| ||| |||| ||||||| |||| | || |||||||||||    
T  31711091 taatacatcatttggtcccttaacttatttttggatttcattttggtcctttaactataaagtgtctcaatttggtctcataagtcttatgtcgtttacc 31711190  T
Q  350 gttttggtcct 360  Q
     ||||| ||||    
T  31711191 attttgatcct 31711201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 351 - 452
Target Start/End: Complemental strand, 36604857 - 36604755
Alignment:
Q  351 ttttggtcctctccattaatttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccataaacctta-taagttcatttaattttaacc 449  Q
    |||||||||||||| ||| ||||||| ||||||| |||||| |||||||| || ||| |||| ||||||||  ||||| ||| ||  |||||||||||||    
T  36604857 ttttggtcctctccgttagtttttaatatcaaatatctaagatgaaccatattaaaaagtggcccaccatatgccttattaattttttttaattttaacc 36604758  T
Q  450 att 452  Q
    |||    
T  36604757 att 36604755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 251 - 320
Target Start/End: Original strand, 29686255 - 29686324
Alignment:
Q  251 taattcataatttagtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaa 320  Q
    |||| ||| ||||||||| |||||||| |||||||||||| ||||||||| |||||||||| ||| ||||    
T  29686255 taatacatcatttagtcccttaacttatttttggttttcactttggtcccttaactataaattgtctcaa 29686324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 270 - 374
Target Start/End: Original strand, 33376236 - 33376341
Alignment:
Q  270 ttaacttacttttggttttcattttggtcccctaactataaaatgtttcaa-ttggtcttataaatattttgtcgtttaccgttttggtcctctccatta 368  Q
    |||||||| |||||||||||| ||| || |||||| |||||| ||| |||| ||||||  |||||| || ||||||||||  |||| ||||||||| |||    
T  33376236 ttaacttatttttggttttcaatttagtgccctaattataaagtgtctcaatttggtcccataaatcttctgtcgtttactattttagtcctctccgtta 33376335  T
Q  369 attttt 374  Q
    ||||||    
T  33376336 attttt 33376341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 251 - 320
Target Start/End: Complemental strand, 35789707 - 35789638
Alignment:
Q  251 taattcataatttagtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaa 320  Q
    |||| ||| ||||||||  |||||||| |||||||||||| ||||||||| |||||||||| ||||||||    
T  35789707 taatacatcatttagtctcttaacttatttttggttttcactttggtcccgtaactataaagtgtttcaa 35789638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 251 - 320
Target Start/End: Original strand, 39590940 - 39591009
Alignment:
Q  251 taattcataatttagtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaa 320  Q
    |||| ||| |||| |||| |||||||| |||||||||||| |||||||||||||||||||| ||| ||||    
T  39590940 taatacatcatttggtcccttaacttatttttggttttcactttggtcccctaactataaagtgtctcaa 39591009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 265 - 322
Target Start/End: Complemental strand, 46796129 - 46796072
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    |||| |||||||| |||||||||| |||||||||||||||||||||| ||| ||||||    
T  46796129 gtcccttaacttatttttggttttaattttggtcccctaactataaagtgtctcaatt 46796072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 265 - 322
Target Start/End: Original strand, 52658924 - 52658981
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    |||| |||||||| ||||  |||||| |||||||||||||||||||||||||||||||    
T  52658924 gtcccttaacttattttttattttcactttggtcccctaactataaaatgtttcaatt 52658981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 321 - 421
Target Start/End: Complemental strand, 38419063 - 38418963
Alignment:
Q  321 ttggtcttataaatattttgtcgtttaccgttttggtcctctccattaatttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccat 420  Q
    ||||||| |||| | || || ||||||| ||||| ||| ||||| ||| |||||||||| ||| || |||| |||||||| |||| ||||||||||||||    
T  38419063 ttggtctcataagtcttctgccgtttactgttttagtcatctccgttagtttttaacattaaacgtttaagatgaaccatatttataggtggtccaccat 38418964  T
Q  421 a 421  Q
    |    
T  38418963 a 38418963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 265 - 364
Target Start/End: Complemental strand, 44128437 - 44128337
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaa-ttggtcttataaatattttgtcgtttaccgttttggtcctctc 363  Q
    ||||||||||||| ||||  |||||| |||||||||||||||||||| ||| |||| || ||| | ||||| || || |||||||  |||||||||||||    
T  44128437 gtcctttaacttatttttcattttcaatttggtcccctaactataaagtgtctcaatttagtcctttaaatcttatgccgtttactattttggtcctctc 44128338  T
Q  364 c 364  Q
    |    
T  44128337 c 44128337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 342 - 429
Target Start/End: Original strand, 28102167 - 28102254
Alignment:
Q  342 cgtttaccgttttggtcctctccattaatttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccataaaccttat 429  Q
    |||||||| |||||||| | ||| || ||||||||| | |||||||||||||||| ||  |||| ||||| |||||| ||||||||||    
T  28102167 cgtttaccattttggtcatttccgtttatttttaaccttaaatgtctaaggtgaatcaactttataggtgatccaccgtaaaccttat 28102254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 251 - 322
Target Start/End: Original strand, 46794839 - 46794910
Alignment:
Q  251 taattcataatttagtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    |||| |||| ||| |||| |||||||| |||||| ||||| ||||||||||||||| |||| ||||||||||    
T  46794839 taatacatactttggtcccttaacttatttttggatttcaatttggtcccctaactttaaactgtttcaatt 46794910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 339 - 429
Target Start/End: Complemental strand, 6140388 - 6140298
Alignment:
Q  339 tgtcgtttaccgttttggtcctctccattaatttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccataaaccttat 429  Q
    ||||||||||  |||||||| | ||| ||| |||||||| | |||| ||||||||||||||  |||| |||| |||||||||| |||||||    
T  6140388 tgtcgtttactattttggtcatttccgttagtttttaaccttaaatatctaaggtgaaccaactttataggtagtccaccatagaccttat 6140298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 270 - 375
Target Start/End: Original strand, 11113760 - 11113866
Alignment:
Q  270 ttaacttacttttggttttcattttggtcccctaactataaaatgtttcaa-ttggtcttataaatattttgtcgtttaccgttttggtcctctccatta 368  Q
    |||||||| ||| |||||||||||| ||||| |||||||||| ||| |||| ||||||| |||| | || || |||||||| |||||||| | ||| |||    
T  11113760 ttaacttattttcggttttcattttagtcccttaactataaagtgtctcaatttggtctcataactcttctgccgtttaccattttggtcatttccgtta 11113859  T
Q  369 attttta 375  Q
     ||||||    
T  11113860 gttttta 11113866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 265 - 374
Target Start/End: Complemental strand, 15446773 - 15446663
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaa-ttggtcttataaatattttgtcgtttaccgttttggtcctctc 363  Q
    |||| |||||||| |||||| |||||||||||||  |||| |||||| |||||||| ||||||  |||||| || |  |||||||  |||||||||||||    
T  15446773 gtcccttaacttatttttggatttcattttggtcatctaattataaagtgtttcaatttggtcccataaattttctaccgtttactattttggtcctctc 15446674  T
Q  364 cattaattttt 374  Q
    | ||| |||||    
T  15446673 cgttagttttt 15446663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 260 - 322
Target Start/End: Complemental strand, 28103594 - 28103532
Alignment:
Q  260 atttagtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    |||| |||| |||||||| |||||| ||||||||||||||| |||||||||| ||| ||||||    
T  28103594 atttggtcccttaacttatttttggatttcattttggtcccttaactataaagtgtctcaatt 28103532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 265 - 322
Target Start/End: Original strand, 306590 - 306647
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    |||| |||||||| |||||| ||||| ||||||||||||||| |||| ||||||||||    
T  306590 gtcccttaacttatttttggatttcaatttggtcccctaactttaaactgtttcaatt 306647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 260 - 364
Target Start/End: Complemental strand, 1273540 - 1273436
Alignment:
Q  260 atttagtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaa-ttggtcttataaatattttgtcgtttaccgttttggtc 358  Q
    |||| |||| |||||||| |||||||||| |||| ||||||||||||||||| ||| |||| ||||||  |||| | || |||||||| |  ||||||||    
T  1273540 atttggtcccttaacttatttttggttttaattt-ggtcccctaactataaagtgtctcaatttggtcccataagtcttatgtcgtttgctattttggtc 1273442  T
Q  359 ctctcc 364  Q
    ||||||    
T  1273441 ctctcc 1273436  T

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Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 265 - 322
Target Start/End: Complemental strand, 2310885 - 2310828
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    |||| |||||||| ||| |  |||||||||||||||||||||||||||||| ||||||    
T  2310885 gtcccttaacttattttcgaatttcattttggtcccctaactataaaatgtctcaatt 2310828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 270 - 457
Target Start/End: Complemental strand, 3533706 - 3533518
Alignment:
Q  270 ttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt-ggtcttataaatattttgtcgtttaccgttttggtcctctccatta 368  Q
    |||||||| ||||  ||||||||| | || |||||||||||| ||| |||||| ||||  |||| | || |   ||||||| |||||||||| ||| | |    
T  3533706 ttaacttatttttaattttcatttcgatcacctaactataaagtgtctcaatttggtccgataactcttctactgtttaccattttggtcctttccgtca 3533607  T
Q  369 atttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccataaacctta-taagttcatttaattttaaccattcgata 457  Q
     |||||||||  |||||||||||||  ||||   ||| ||| ||||||||||| |||||| ||||||  |||||||||||||||| ||||    
T  3533606 gtttttaacactaaatgtctaaggtcgaccaacattataggcggtccaccatagaccttactaagtt-ttttaattttaaccatttgata 3533518  T

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Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 563 - 612
Target Start/End: Complemental strand, 6140171 - 6140122
Alignment:
Q  563 tcatctccttcatcaacacattcatactctttagtcaattttcatataac 612  Q
    ||||||||||||||| ||||||||||||| ||| ||||| ||||||||||    
T  6140171 tcatctccttcatcatcacattcatactccttaatcaatcttcatataac 6140122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 265 - 322
Target Start/End: Complemental strand, 12396977 - 12396920
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    |||| |||||||| ||| || |||||||||||||||||||||||||| ||| ||||||    
T  12396977 gtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatt 12396920  T

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Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 265 - 322
Target Start/End: Original strand, 15445449 - 15445506
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    |||| |||||||| |||||| ||||||||||||||||||| |||||| ||| ||||||    
T  15445449 gtcccttaacttatttttggatttcattttggtcccctaattataaagtgtctcaatt 15445506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 265 - 322
Target Start/End: Original strand, 26376342 - 26376399
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    |||| |||| ||| ||||||||||||||||| |||||||||||||||| || ||||||    
T  26376342 gtcccttaaattatttttggttttcattttgatcccctaactataaaacgtctcaatt 26376399  T

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Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 265 - 322
Target Start/End: Original strand, 29833385 - 29833442
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    |||| |||||||| ||| || ||||||||||||||||||| |||||||||| ||||||    
T  29833385 gtcccttaacttattttcggatttcattttggtcccctaattataaaatgtctcaatt 29833442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 270 - 374
Target Start/End: Complemental strand, 44305077 - 44304972
Alignment:
Q  270 ttaacttacttttggttttcattttggtcccctaactataaaatgtttcaa-ttggtcttataaatattttgtcgtttaccgttttggtcctctccatta 368  Q
    |||||||| |||| ||||||| |||||||||||||||| ||| ||| |||| |||||| ||||||| ||  |  ||||||  |||||||| ||||| |||    
T  44305077 ttaacttattttttgttttcaatttggtcccctaactacaaagtgtctcaatttggtcctataaatcttccgctgtttactattttggtcatctccgtta 44304978  T
Q  369 attttt 374  Q
    ||||||    
T  44304977 attttt 44304972  T

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Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 690 - 722
Target Start/End: Original strand, 87202 - 87234
Alignment:
Q  690 ctctctaccatatatttcacttcccttcatctc 722  Q
    |||||||||||||||||||||||||||||||||    
T  87202 ctctctaccatatatttcacttcccttcatctc 87234  T

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Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 270 - 322
Target Start/End: Original strand, 40143672 - 40143724
Alignment:
Q  270 ttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    |||||||| |||| ||||||||||| |||||||||||||||| ||| ||||||    
T  40143672 ttaacttatttttagttttcattttagtcccctaactataaagtgtctcaatt 40143724  T

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Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 690 - 722
Target Start/End: Complemental strand, 41401397 - 41401365
Alignment:
Q  690 ctctctaccatatatttcacttcccttcatctc 722  Q
    |||||||||||||||||||||||||||||||||    
T  41401397 ctctctaccatatatttcacttcccttcatctc 41401365  T

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Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 341 - 429
Target Start/End: Original strand, 50530593 - 50530681
Alignment:
Q  341 tcgtttaccgttttggtcctctccattaatttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccataaaccttat 429  Q
    ||||||||  |||||||| | ||  |||||||||||| | ||| |||||||||||||||  |||| |||| |||||||||| |||||||    
T  50530593 tcgtttactattttggtcatttctgttaatttttaaccttaaaagtctaaggtgaaccaactttataggtagtccaccatagaccttat 50530681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 270 - 322
Target Start/End: Complemental strand, 55953950 - 55953898
Alignment:
Q  270 ttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    |||||||| ||||| |||||| ||||||||| |||||||||||||| ||||||    
T  55953950 ttaacttatttttgattttcaatttggtcccataactataaaatgtctcaatt 55953898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 251 - 322
Target Start/End: Original strand, 47667178 - 47667248
Alignment:
Q  251 taattcataatttagtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    |||| |||| ||| ||||||||||||| |||||||||| |||||||| | ||||||||||| ||| ||||||    
T  47667178 taatacatattttggtcctttaacttatttttggtttttattttggt-ctctaactataaagtgtctcaatt 47667248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 279 - 364
Target Start/End: Complemental strand, 5688726 - 5688640
Alignment:
Q  279 ttttggttttcattttggtcccctaactataaaatgtttcaa-ttggtcttataaatattttgtcgtttaccgttttggtcctctcc 364  Q
    |||| ||||||| |||||||||||||||||||| ||| |||| |||||   |||||| || ||||||||||  |||||||| |||||    
T  5688726 ttttagttttcaatttggtcccctaactataaagtgtctcaatttggttccataaatcttatgtcgtttactattttggtcatctcc 5688640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 302 - 399
Target Start/End: Original strand, 17319092 - 17319190
Alignment:
Q  302 taactataaaatgtttcaatt-ggtcttataaatattttgtcgtttaccgttttggtcctctccattaatttttaacatcaaatgtctaaggtgaacca 399  Q
    |||||||||| |||||||||| |||   |||||| || || |||||||  |||||||| || || ||| |||||||| | |||||||||||||||||||    
T  17319092 taactataaagtgtttcaatttggttccataaatcttctggcgtttactattttggtcttcaccgttagtttttaaccttaaatgtctaaggtgaacca 17319190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 270 - 320
Target Start/End: Complemental strand, 52981248 - 52981198
Alignment:
Q  270 ttaacttacttttggttttcattttggtcccctaactataaaatgtttcaa 320  Q
    |||||||| |||| |||||||||||||||||| |||||| || ||||||||    
T  52981248 ttaacttatttttagttttcattttggtccccaaactatcaagtgtttcaa 52981198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 265 - 322
Target Start/End: Complemental strand, 937201 - 937144
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    |||| |||| ||| ||| || |||||||||||||||||||||||||| ||| ||||||    
T  937201 gtcccttaatttattttcggatttcattttggtcccctaactataaagtgtctcaatt 937144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 271 - 359
Target Start/End: Original strand, 10403298 - 10403387
Alignment:
Q  271 taacttacttttggttttcattttggtcccctaactataaaatgt-ttcaattggtcttataaatattttgtcgtttaccgttttggtcc 359  Q
    ||||||| |||||||||| | |||||||||||||||||||| ||| || | |||||||  ||||| ||  |||||||||  |||||||||    
T  10403298 taacttatttttggtttttactttggtcccctaactataaagtgtcttaatttggtctcgtaaatcttacgtcgtttactattttggtcc 10403387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 265 - 318
Target Start/End: Original strand, 25764440 - 25764493
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttc 318  Q
    |||| ||||||||||||| | ||||||||||||||| ||||||| ||| |||||    
T  25764440 gtcccttaacttactttttggtttcattttggtcccttaactattaaaagtttc 25764493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 265 - 318
Target Start/End: Original strand, 26107668 - 26107721
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttc 318  Q
    |||| ||||||||||||| | ||||||||||||||| ||||||| ||| |||||    
T  26107668 gtcccttaacttactttttggtttcattttggtcccttaactattaaaagtttc 26107721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 265 - 322
Target Start/End: Complemental strand, 30683130 - 30683073
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    |||| |||| ||| ||||| |||||||||||||||| |||||||||| ||| ||||||    
T  30683130 gtcccttaatttatttttgattttcattttggtcccttaactataaagtgtctcaatt 30683073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 265 - 322
Target Start/End: Complemental strand, 44690958 - 44690901
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    |||| |||||||| ||| || |||||||||||| || |||||||||||||| ||||||    
T  44690958 gtcccttaacttattttcggatttcattttggttccataactataaaatgtctcaatt 44690901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 265 - 318
Target Start/End: Complemental strand, 51949661 - 51949608
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttc 318  Q
    |||||||||||||||||| | |||| |||||||||| ||||||| ||| |||||    
T  51949661 gtcctttaacttactttttggtttcgttttggtcccttaactattaaaagtttc 51949608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 265 - 322
Target Start/End: Complemental strand, 56001371 - 56001314
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    |||| |||||||| ||||  |||||||||||| |||||||||||||| ||| ||||||    
T  56001371 gtcccttaacttattttttattttcattttggccccctaactataaagtgtctcaatt 56001314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 116; Significance: 1e-58; HSPs: 2)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 260 - 528
Target Start/End: Complemental strand, 77289 - 77019
Alignment:
Q  260 atttagtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt-ggtcttataaatattttgtcgtttaccgttttggtc 358  Q
    ||||||||  |||||||| |||| ||||||| ||||||| ||||||||||||  ||||||||| ||||  ||||||||| |  ||||||| |||||||||    
T  77289 atttagtctcttaacttattttttgttttcactttggtctcctaactataaagcgtttcaatttggtcccataaatattctaccgtttactgttttggtc 77190  T
Q  359 ctctccattaatttttaacatcaaatgt--ctaaggtgaaccatgtttaaaggtggtccaccataaaccttataagttcatttaattttaaccattcgat 456  Q
     ||||| ||||| ||| |||||||||||  |||||||||||||| |||||||||||||||||||  |||||||||||||||||||||||||||||| |||    
T  77189 ttctccgttaatgtttgacatcaaatgtgtctaaggtgaaccatatttaaaggtggtccaccattgaccttataagttcatttaattttaaccatttgat 77090  T
Q  457 annnnnnnncaaaaagagaaccgtttgatcatataagtatgttgtatcttacgatgaactatcaacacctaa 528  Q
    |        |||||| ||||| ||| |||||||||||| ||||||||||||||||||||||||||| |||||    
T  77089 a-tttttttcaaaaatagaactgttggatcatataagtctgttgtatcttacgatgaactatcaacgcctaa 77019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045; HSP #2
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 563 - 616
Target Start/End: Complemental strand, 76988 - 76935
Alignment:
Q  563 tcatctccttcatcaacacattcatactctttagtcaattttcatataacccag 616  Q
    ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  76988 tcatctccttcatcaacacattcatactccttaatcaattttcatataacccag 76935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 114; Significance: 2e-57; HSPs: 67)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 251 - 528
Target Start/End: Original strand, 19622004 - 19622281
Alignment:
Q  251 taattcataatttagtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaattg-gtcttataaatattttgtcgtttacc 349  Q
    |||| ||| |||| ||||||||| ||| |||||||||||| |||||||||||||||||||| ||| ||||||  |||| |||||| || ||   |||||     
T  19622004 taatacatcatttggtcctttaagttatttttggttttcactttggtcccctaactataaagtgtctcaatttagtctcataaatcttctgctatttact 19622103  T
Q  350 gttttggtcctctccattaatttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccataaaccttataagttcatttaattttaacc 449  Q
    | ||||||||||||| ||| |||| |||||||||||| |||||||||| |||||||||||||||||||| || |||||||| |||||||||||||||| |    
T  19622104 ggtttggtcctctccgttagttttcaacatcaaatgtttaaggtgaactatgtttaaaggtggtccaccgtagaccttataggttcatttaattttaatc 19622203  T
Q  450 attcgatannnnnnnncaaaaagagaaccgtttgatcatataagtatgttgtatcttacgatgaactatcaacacctaa 528  Q
    ||| ||||        ||||||||||| |||| ||||||||| || |||| ||||||||||||||||||||||||||||    
T  19622204 atttgata-tttttttcaaaaagagaaacgttggatcatataggtctgttatatcttacgatgaactatcaacacctaa 19622281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 251 - 429
Target Start/End: Original strand, 53808317 - 53808496
Alignment:
Q  251 taattcataatttagtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaat-tggtcttataaatattttgtcgtttacc 349  Q
    |||| ||| |||| |||| |||||||| ||| |||||| | ||||||| |||||||||||| ||| ||||| |||||  |||||| || ||||||||||     
T  53808317 taatacatcatttggtcccttaacttattttcggttttgaatttggtctcctaactataaagtgtctcaatctggtcccataaatcttatgtcgtttact 53808416  T
Q  350 gttttggtcctctccattaatttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccataaaccttat 429  Q
     |||||||| ||||||||| ||||||||||||||| ||||||||||| ||| | ||||||||||||||||||||||||||    
T  53808417 attttggtcatctccattagtttttaacatcaaatttctaaggtgaatcatatctaaaggtggtccaccataaaccttat 53808496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 251 - 528
Target Start/End: Original strand, 25583113 - 25583388
Alignment:
Q  251 taattcataatttagtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaa-ttggtcttataaatattttgtcgtttacc 349  Q
    |||| ||| ||||||||| |||||||| ||||| |||||| ||||||||||||||||| ||| || |||| ||||||  |||| | || || |||||||     
T  25583113 taatacatcatttagtcccttaacttatttttgattttcactttggtcccctaactattaaacgtctcaatttggtcccataagtcttctgccgtttact 25583212  T
Q  350 gttttggtcctctccattaatttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccataaaccttataagttcatttaattttaacc 449  Q
     |||||||||||||  |||||||||||| | |||||||||||| |||| ||  ||||||||| |||||||||  |||||||| ||||||||||||||||     
T  25583213 attttggtcctctctgttaatttttaaccttaaatgtctaaggcgaactat-attaaaggtgctccaccataggccttataaattcatttaattttaact 25583311  T
Q  450 attcgatannnnnnnncaaaaagagaaccgtttgatcatataagtatgttgtatcttacgatgaactatcaacacctaa 528  Q
     || ||||         ||||||||||||||| ||| ||||| || ||||||| |||||| ||||| ||||||||||||    
T  25583312 ttttgatattttttt--aaaaagagaaccgttggattatataggtctgttgtaccttacggtgaaccatcaacacctaa 25583388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 265 - 421
Target Start/End: Original strand, 11219443 - 11219600
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt-ggtcttataaatattttgtcgtttaccgttttggtcctctc 363  Q
    |||| |||||||| |||||| |||||||||||||||||||||||||| ||| |||||| ||||| || | | || || |||||||  |||||||| ||||    
T  11219443 gtccgttaacttatttttggatttcattttggtcccctaactataaagtgtctcaatttggtctcatgagtcttctgccgtttactattttggtcatctc 11219542  T
Q  364 cattaatttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccata 421  Q
    | |||  |||||||||||||  ||||||||||||||| |||||||||||| |||||||    
T  11219543 cgttagattttaacatcaaaattctaaggtgaaccatatttaaaggtggttcaccata 11219600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 270 - 421
Target Start/End: Original strand, 39133035 - 39133187
Alignment:
Q  270 ttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt-ggtcttataaatattttgtcgtttaccgttttggtcctctccatta 368  Q
    |||||||| |||||||||||| |||||||||||||||||||| ||| |||||| ||||   ||  | || | |||||  |  |||||||||||||  |||    
T  39133035 ttaacttatttttggttttcaatttggtcccctaactataaagtgtctcaatttggtcccttatgtcttctctcgttacctcttttggtcctctctgtta 39133134  T
Q  369 atttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccata 421  Q
     ||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  39133135 gtttttaacatcaaatgtctaaggtgaaccatatttaaaggtggtccaccata 39133187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 270 - 420
Target Start/End: Original strand, 8371238 - 8371389
Alignment:
Q  270 ttaacttacttttggttttcattttggtcccctaactataaaatgtttcaa-ttggtcttataaatattttgtcgtttaccgttttggtcctctccatta 368  Q
    |||||||| |||| |||||||||||||||||||||||||||||||| |||| |||||   |||||| || ||  ||||||  |||||||||||||| |||    
T  8371238 ttaacttattttttgttttcattttggtcccctaactataaaatgtctcaatttggttccataaatcttctgcagtttactattttggtcctctccgtta 8371337  T
Q  369 atttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccat 420  Q
     ||||||||||||||| ||||| | ||||| |  ||| ||||||||||||||    
T  8371338 gtttttaacatcaaatatctaaagcgaaccgtacttagaggtggtccaccat 8371389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 251 - 421
Target Start/End: Complemental strand, 17350219 - 17350048
Alignment:
Q  251 taattcataatttagtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt-ggtcttataaatattttgtcgtttacc 349  Q
    |||| ||| |||| |||| |||||||| |||||||||||| |||| ||||||||||||||| ||| |||||| ||||   ||  | || |   |||  |     
T  17350219 taatacatcatttggtcccttaacttatttttggttttcaatttgttcccctaactataaagtgtctcaatttggtcccttatgtcttctcctgttacct 17350120  T
Q  350 gttttggtcctctccattaatttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccata 421  Q
     |||||||||||||| ||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  17350119 cttttggtcctctccgttagtttttaacatcaaatgtctaaggtgaaccatatttaaaggtggtccaccata 17350048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 270 - 421
Target Start/End: Complemental strand, 26799004 - 26798852
Alignment:
Q  270 ttaacttacttttggttttcattttggtcccctaactataaaatgtttcaa-ttggtcttataaatattttgtcgtttaccgttttggtcctctccatta 368  Q
    |||||||| |||||||||| |||||||||||||||||||||||||| |||| ||||||  |||| | ||    |||||||| |||||||||||||| |||    
T  26799004 ttaacttatttttggtttttattttggtcccctaactataaaatgtctcaatttggtcccataattcttcctccgtttaccattttggtcctctccgtta 26798905  T
Q  369 atttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccata 421  Q
     |||||||| | |||||  ||| | ||||||  |||  |||||||||||||||    
T  26798904 gtttttaaccttaaatggttaaagcgaaccaactttgtaggtggtccaccata 26798852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 265 - 374
Target Start/End: Original strand, 7820403 - 7820513
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaa-ttggtcttataaatattttgtcgtttaccgttttggtcctctc 363  Q
    |||| |||||||| |||||  |||||||||||||| ||||||||||| |||||||| |||| |  |||||| || |||||||||| ||||||||||||||    
T  7820403 gtcccttaacttatttttgaatttcattttggtcctctaactataaagtgtttcaatttggacccataaattttatgtcgtttactgttttggtcctctc 7820502  T
Q  364 cattaattttt 374  Q
    | ||| |||||    
T  7820503 cgttagttttt 7820513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 251 - 364
Target Start/End: Original strand, 42632705 - 42632819
Alignment:
Q  251 taattcataatttagtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaa-ttggtcttataaatattttgtcgtttacc 349  Q
    |||| ||| |||| |||| ||||||||||||||||||||| |||||||||||||||||||| ||| |||| ||| ||  |||||| || ||||||||||     
T  42632705 taatacatcatttggtcccttaacttacttttggttttcaatttggtcccctaactataaagtgtctcaatttgatcccataaatcttatgtcgtttact 42632804  T
Q  350 gttttggtcctctcc 364  Q
     |||| |||||||||    
T  42632805 attttagtcctctcc 42632819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 351 - 452
Target Start/End: Complemental strand, 7483541 - 7483440
Alignment:
Q  351 ttttggtcctctccattaatttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccataaaccttataagttcatttaattttaacca 450  Q
    |||||||| ||||| ||| ||||||||||||||| ||||||||||||||| || ||| |||| ||||||||  |||||| | ||  ||||||||||||||    
T  7483541 ttttggtcatctccgttagtttttaacatcaaatatctaaggtgaaccatattaaaaagtggcccaccatatgccttattaatttttttaattttaacca 7483442  T
Q  451 tt 452  Q
    ||    
T  7483441 tt 7483440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 265 - 364
Target Start/End: Complemental strand, 11220761 - 11220661
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaa-ttggtcttataaatattttgtcgtttaccgttttggtcctctc 363  Q
    |||| |||||||| |||||  |||||||||||||||||||||||||| ||| |||| |||||| ||||||| || ||||||||||  ||||||||| |||    
T  11220761 gtcccttaacttatttttgaatttcattttggtcccctaactataaagtgtctcaatttggtcctataaatcttctgtcgtttactattttggtcccctc 11220662  T
Q  364 c 364  Q
    |    
T  11220661 c 11220661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 271 - 374
Target Start/End: Complemental strand, 19253099 - 19252995
Alignment:
Q  271 taacttacttttggttttcattttggtcccctaactataaaatgtttcaa-ttggtcttataaatattttgtcgtttaccgttttggtcctctccattaa 369  Q
    ||||||| |||||||||||| ||||||||||||| |||||||||| |||| ||| ||  ||||||||| || |||||||| |||||||||| ||| || |    
T  19253099 taacttatttttggttttcaatttggtcccctaattataaaatgtctcaatttgatcccataaatattctgccgtttaccattttggtcctgtccgttta 19253000  T
Q  370 ttttt 374  Q
    |||||    
T  19252999 ttttt 19252995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 251 - 322
Target Start/End: Complemental strand, 41387550 - 41387479
Alignment:
Q  251 taattcataatttagtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    |||| ||| |||| |||| |||||||| |||||||||||| |||||||||||||||||||||||| ||||||    
T  41387550 taatacatcatttggtcccttaacttatttttggttttcaatttggtcccctaactataaaatgtctcaatt 41387479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 350 - 429
Target Start/End: Original strand, 47765537 - 47765616
Alignment:
Q  350 gttttggtcctctccattaatttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccataaaccttat 429  Q
    ||||||||| ||||| ||| ||||||||||||||| ||| |||||||||||  |||||| |||||||||||| |||||||    
T  47765537 gttttggtcatctccgttagtttttaacatcaaatatcttaggtgaaccattgttaaagatggtccaccatagaccttat 47765616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 260 - 358
Target Start/End: Complemental strand, 49122110 - 49122011
Alignment:
Q  260 atttagtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaa-ttggtcttataaatattttgtcgtttaccgttttggtc 358  Q
    |||| ||||||||||||| |||||||||||||||||||| | |||||||||| ||| |||| ||||||| |||| | || || |||||||| ||||||||    
T  49122110 atttggtcctttaacttatttttggttttcattttggtctcttaactataaagtgtctcaatttggtctcataagttttctgccgtttaccattttggtc 49122011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 265 - 374
Target Start/End: Complemental strand, 47855441 - 47855331
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaa-ttggtcttataaatattttgtcgtttaccgttttggtcctctc 363  Q
    |||| |||||||| |||||| ||||||||||||||  |||||||||| ||| |||| |||||| ||||||| || || |||||||  |||||||||||||    
T  47855441 gtcccttaacttatttttggatttcattttggtccgttaactataaagtgtctcaatttggtcctataaatcttctgccgtttactattttggtcctctc 47855342  T
Q  364 cattaattttt 374  Q
    | ||| |||||    
T  47855341 cgttatttttt 47855331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 251 - 364
Target Start/End: Complemental strand, 54654083 - 54653969
Alignment:
Q  251 taattcataatttagtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaa-ttggtcttataaatattttgtcgtttacc 349  Q
    |||| ||| |||| |||| |||||||| |||||| ||||||||||||||| |||||||||| ||| |||| ||||||  |||| | || ||||||||||     
T  54654083 taatacatcatttggtcccttaacttatttttggatttcattttggtcccttaactataaagtgtctcaatttggtcccataattcttctgtcgtttact 54653984  T
Q  350 gttttggtcctctcc 364  Q
     ||||||||||||||    
T  54653983 attttggtcctctcc 54653969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 265 - 322
Target Start/End: Complemental strand, 8372719 - 8372662
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    |||| |||||||| ||||||||||||||||||||||||||||||||| ||| ||||||    
T  8372719 gtcccttaacttatttttggttttcattttggtcccctaactataaagtgtctcaatt 8372662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 285 - 429
Target Start/End: Complemental strand, 12062467 - 12062322
Alignment:
Q  285 ttttcattttggtcccctaactataaaatgtttcaatt-ggtcttataaatattttgtcgtttaccgttttggtcctctccattaatttttaacatcaaa 383  Q
    |||||| ||||||||| ||||||| || ||| |||||| ||||  || | | |||||  ||||||  |||||||| | ||||||| |||||||| | |||    
T  12062467 ttttcagtttggtcccttaactattaagtgtctcaatttggtcccattactcttttgctgtttactattttggtcatttccattagtttttaaccttaaa 12062368  T
Q  384 tgtctaaggtgaaccatgtttaaaggtggtccaccataaaccttat 429  Q
    ||||||||||||||||  |||| ||||| ||||||||| |||||||    
T  12062367 tgtctaaggtgaaccaactttataggtgatccaccatataccttat 12062322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 351 - 452
Target Start/End: Original strand, 32979188 - 32979289
Alignment:
Q  351 ttttggtcctctccattaatttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccataaaccttataagttcatttaattttaacca 450  Q
    |||||||||||||| ||| |||||||||| ||| | ||||||||||| || |||||||||||| ||||||| ||| ||| |  |  ||||||||||||||    
T  32979188 ttttggtcctctccgttagtttttaacattaaaagactaaggtgaactatatttaaaggtggttcaccatagaccgtattaaattttttaattttaacca 32979287  T
Q  451 tt 452  Q
    ||    
T  32979288 tt 32979289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 351 - 420
Target Start/End: Complemental strand, 34903010 - 34902941
Alignment:
Q  351 ttttggtcctctccattaatttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccat 420  Q
    |||||||| ||||| ||| ||||||||| ||||||||||| ||||||||| |||||||||||| ||||||    
T  34903010 ttttggtcatctccgttagtttttaacaccaaatgtctaaagtgaaccatatttaaaggtggtgcaccat 34902941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 262 - 370
Target Start/End: Complemental strand, 47808212 - 47808103
Alignment:
Q  262 ttagtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt-ggtcttataaatattttgtcgtttaccgttttggtcct 360  Q
    ||||||| |||||||| |||||| ||||| |||||| || |||||||||| ||| |||||| ||||| |||||| || |||||||| |  ||||||||||    
T  47808212 ttagtcccttaacttatttttggatttcactttggttccttaactataaagtgtctcaatttggtctcataaatcttctgtcgtttgctattttggtcct 47808113  T
Q  361 ctccattaat 370  Q
    |||| |||||    
T  47808112 ctccgttaat 47808103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 270 - 322
Target Start/End: Complemental strand, 10987751 - 10987699
Alignment:
Q  270 ttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||| ||||||    
T  10987751 ttaacttatttttggttttcattttggtcccctaactataaagtgtctcaatt 10987699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 251 - 322
Target Start/End: Original strand, 5416197 - 5416268
Alignment:
Q  251 taattcataatttagtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    |||| |||| ||| |||| |||||||| ||| || |||||||||||||||||||||||||||||| ||||||    
T  5416197 taatacatactttggtcccttaacttattttcggatttcattttggtcccctaactataaaatgtctcaatt 5416268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 251 - 322
Target Start/End: Complemental strand, 53809610 - 53809539
Alignment:
Q  251 taattcataatttagtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    |||| ||| ||||||||| |||||||| |||| ||||||||||||||||||||||| ||||| || ||||||    
T  53809610 taatacatcatttagtcccttaacttattttttgttttcattttggtcccctaactttaaaacgtctcaatt 53809539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 339 - 421
Target Start/End: Original strand, 23559907 - 23559989
Alignment:
Q  339 tgtcgtttaccgttttggtcctctccattaatttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccata 421  Q
    ||||||||||  |||||||||||||| ||| |||||||| | || |||||||| |||||||  |||| |||||||||||||||    
T  23559907 tgtcgtttactattttggtcctctccgttagtttttaaccttaattgtctaagatgaaccaactttataggtggtccaccata 23559989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 563 - 616
Target Start/End: Original strand, 19622318 - 19622371
Alignment:
Q  563 tcatctccttcatcaacacattcatactctttagtcaattttcatataacccag 616  Q
    |||| |||||||||| ||||||||||||| ||||||||| ||||||||||||||    
T  19622318 tcatatccttcatcatcacattcatactccttagtcaatcttcatataacccag 19622371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 265 - 322
Target Start/End: Original strand, 41386143 - 41386200
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    |||| |||||||| |||||||||||| |||||||||||||||||||| ||| ||||||    
T  41386143 gtcccttaacttatttttggttttcaatttggtcccctaactataaagtgtctcaatt 41386200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 251 - 363
Target Start/End: Complemental strand, 42634003 - 42633890
Alignment:
Q  251 taattcataatttagtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaa-ttggtcttataaatattttgtcgtttacc 349  Q
    |||| ||| |||| |||| |||||||| ||||| |||||| |||||||||||||||||| | ||| |||| ||||||  |||||| || |||||||||      
T  42634003 taatacatcatttggtcccttaacttatttttgattttcaatttggtcccctaactatagagtgtctcaatttggtcccataaatcttatgtcgtttatt 42633904  T
Q  350 gttttggtcctctc 363  Q
     |||||||||||||    
T  42633903 attttggtcctctc 42633890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 265 - 322
Target Start/End: Complemental strand, 51401454 - 51401397
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    |||| |||||||| |||||||||||| |||||||||||||||||||| ||| ||||||    
T  51401454 gtcccttaacttatttttggttttcactttggtcccctaactataaagtgtctcaatt 51401397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 371 - 450
Target Start/End: Complemental strand, 48254885 - 48254806
Alignment:
Q  371 ttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccataaacctta-taagttcatttaattttaacca 450  Q
    ||||||||| |||||||||||||| ||||   ||| |||||||||||||||||||||| ||||||  ||||||||||||||    
T  48254885 ttttaacattaaatgtctaaggtggaccaacattataggtggtccaccataaaccttactaagtt-ttttaattttaacca 48254806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 265 - 396
Target Start/End: Original strand, 51400228 - 51400360
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaa-ttggtcttataaatattttgtcgtttaccgttttggtcctctc 363  Q
    |||| |||||||| |||||||||||| |||| | ||||||||||||| ||| |||| || |||  |||||| ||  | ||| |||| |||||||||| ||    
T  51400228 gtcccttaacttatttttggttttcactttgattccctaactataaagtgtctcaatttagtcccataaattttcagccgtataccattttggtcctttc 51400327  T
Q  364 cattaatttttaacatcaaatgtctaaggtgaa 396  Q
    | ||  |||||||||| |||||||| |||||||    
T  51400328 cgtttgtttttaacattaaatgtcttaggtgaa 51400360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 260 - 322
Target Start/End: Original strand, 43101902 - 43101964
Alignment:
Q  260 atttagtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    |||| |||| |||||||| ||||||||||||||||||||| |||| |||||| ||| ||||||    
T  43101902 atttggtcccttaacttatttttggttttcattttggtcctctaattataaagtgtctcaatt 43101964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 265 - 322
Target Start/End: Original strand, 19579233 - 19579290
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    |||| |||||||| |||  | |||||||||||||||||||||||||||||| ||||||    
T  19579233 gtcccttaacttattttcagatttcattttggtcccctaactataaaatgtctcaatt 19579290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 351 - 421
Target Start/End: Original strand, 31638218 - 31638290
Alignment:
Q  351 ttttggtcctctccattaatttttaacatcaaatgt--ctaaggtgaaccatgtttaaaggtggtccaccata 421  Q
    ||||| ||||||||  || ||||||||||||||| |  |||||||||||||| ||||||||||||| ||||||    
T  31638218 ttttgatcctctccgctagtttttaacatcaaatatatctaaggtgaaccatatttaaaggtggtctaccata 31638290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 265 - 322
Target Start/End: Original strand, 32973152 - 32973209
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    |||| |||||||| ||| || |||||||||||||||||||||||||| ||| ||||||    
T  32973152 gtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatt 32973209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 265 - 322
Target Start/End: Complemental strand, 32974326 - 32974269
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    |||| |||||||| ||| || |||||||||||||||||||||||||| ||| ||||||    
T  32974326 gtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatt 32974269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 270 - 374
Target Start/End: Complemental strand, 32980550 - 32980445
Alignment:
Q  270 ttaacttacttttggttttcattttggtcccctaactataaaatgtttcaa-ttggtcttataaatattttgtcgtttaccgttttggtcctctccatta 368  Q
    |||||||| |||  ||||||| |||||||||||||||| ||| ||| |||| |||||| ||||||| || || |||||||  |||||||| ||||| |||    
T  32980550 ttaacttattttctgttttcaatttggtcccctaactacaaagtgtctcaatttggtcctataaatcttctgccgtttactattttggtcatctccgtta 32980451  T
Q  369 attttt 374  Q
     |||||    
T  32980450 gttttt 32980445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 265 - 322
Target Start/End: Original strand, 33563962 - 33564019
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    |||| |||||||| |||||| ||||||||| |||||||||||||||| ||| ||||||    
T  33563962 gtcccttaacttatttttggatttcattttagtcccctaactataaagtgtctcaatt 33564019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 285 - 417
Target Start/End: Complemental strand, 35174465 - 35174332
Alignment:
Q  285 ttttcattttggtcccctaactataaaatgtttcaat-tggtcttataaatattttgtcgtttaccgttttggtcctctccattaatttttaacatcaaa 383  Q
    |||||||||||||||| ||||||| || ||||||||  |||||  |||| | || | ||||||||  |||||||| | ||  |||||||||||| | |||    
T  35174465 ttttcattttggtcccttaactattaagtgtttcaaaatggtcccataactcttctatcgtttactattttggtcatttctgttaatttttaaccttaaa 35174366  T
Q  384 tgtctaaggtgaaccatgtttaaaggtggtccac 417  Q
     |||||||||||||||  |||| |||| ||||||    
T  35174365 agtctaaggtgaaccaactttataggtagtccac 35174332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 265 - 322
Target Start/End: Original strand, 35633240 - 35633297
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    |||| |||||||| |||||| ||||||||||||||  |||||||||||||| ||||||    
T  35633240 gtcccttaacttatttttggatttcattttggtcctataactataaaatgtctcaatt 35633297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 265 - 322
Target Start/End: Complemental strand, 48035427 - 48035370
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    |||| |||||||| ||| || |||||||||||||||||||||||||| ||| ||||||    
T  48035427 gtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatt 48035370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 265 - 322
Target Start/End: Original strand, 52292607 - 52292664
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    |||| |||||||| ||| || |||||||||||||||||||||||||| ||| ||||||    
T  52292607 gtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatt 52292664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 265 - 322
Target Start/End: Complemental strand, 52293626 - 52293569
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    |||| |||||||| ||| || |||||||||||||||||||||||||| ||| ||||||    
T  52293626 gtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatt 52293569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 265 - 322
Target Start/End: Original strand, 53047910 - 53047967
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    |||| |||||||| ||| || |||||||||||||||||||||||||| ||| ||||||    
T  53047910 gtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatt 53047967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 273 - 364
Target Start/End: Original strand, 29536735 - 29536827
Alignment:
Q  273 acttacttttggttttcattttggtcccctaactataaaatgtttcaa-ttggtcttataaatattttgtcgtttaccgttttggtcctctcc 364  Q
    ||||| |||||| |||||||||| ||| ||||||||||| ||| |||| ||||||  |||||| || | ||||||||  ||||||||||||||    
T  29536735 acttatttttggatttcattttgatcctctaactataaagtgtctcaatttggtcccataaatcttctttcgtttactattttggtcctctcc 29536827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 270 - 322
Target Start/End: Complemental strand, 39288537 - 39288485
Alignment:
Q  270 ttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    |||||||| ||| || |||||||||||||||||||||||||| ||| ||||||    
T  39288537 ttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatt 39288485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 270 - 322
Target Start/End: Complemental strand, 47767048 - 47766997
Alignment:
Q  270 ttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    |||||||| ||||||||||||||||||| ||||||||||||| ||| ||||||    
T  47767048 ttaacttatttttggttttcattttggt-ccctaactataaagtgtctcaatt 47766997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 270 - 322
Target Start/End: Original strand, 53342734 - 53342786
Alignment:
Q  270 ttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    |||||||| ||| || |||||||||||||||||||||||||| ||| ||||||    
T  53342734 ttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatt 53342786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 251 - 322
Target Start/End: Original strand, 47806817 - 47806888
Alignment:
Q  251 taattcataatttagtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    |||| ||| ||||||| | |||||||| |||||| ||||||||||||||| ||| |||||| ||| ||||||    
T  47806817 taatacatcatttagtaccttaacttatttttggatttcattttggtcccttaattataaagtgtctcaatt 47806888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 251 - 322
Target Start/End: Complemental strand, 55443667 - 55443596
Alignment:
Q  251 taattcataatttagtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    |||| |||| ||| |||| |||||||| ||| |  |||||||||||||||||||||||||| ||| ||||||    
T  55443667 taatacatactttggtcccttaacttattttcgaatttcattttggtcccctaactataaagtgtctcaatt 55443596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 265 - 311
Target Start/End: Complemental strand, 5417151 - 5417105
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaa 311  Q
    |||| |||||||| ||| || ||||||||||||||||||||||||||    
T  5417151 gtcccttaacttattttcggatttcattttggtcccctaactataaa 5417105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 265 - 311
Target Start/End: Complemental strand, 40502318 - 40502272
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaa 311  Q
    |||| |||||||| |||||| ||| ||||||||||||||||||||||    
T  40502318 gtcccttaacttatttttggattttattttggtcccctaactataaa 40502272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 251 - 321
Target Start/End: Complemental strand, 49334454 - 49334384
Alignment:
Q  251 taattcataatttagtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaat 321  Q
    |||| ||| ||||| |||||| ||||| |||| ||||||||||||||||  |||||||||| ||| |||||    
T  49334454 taatacatcatttaatcctttgacttattttttgttttcattttggtcctttaactataaattgtctcaat 49334384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 272 - 322
Target Start/End: Complemental strand, 52705404 - 52705354
Alignment:
Q  272 aacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    |||||| ||| || |||||||||||||||||||||||||| ||| ||||||    
T  52705404 aacttattttcggatttcattttggtcccctaactataaagtgtctcaatt 52705354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 261 - 306
Target Start/End: Complemental strand, 1070137 - 1070092
Alignment:
Q  261 tttagtcctttaacttacttttggttttcattttggtcccctaact 306  Q
    ||||||||||||||||| |||| | ||||||||||||||| |||||    
T  1070137 tttagtcctttaacttattttttggtttcattttggtcccttaact 1070092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 265 - 322
Target Start/End: Complemental strand, 2225127 - 2225070
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    |||| |||||||| |||||| ||||| ||||||||||||||| |||| ||| ||||||    
T  2225127 gtcccttaacttatttttggatttcaatttggtcccctaactttaaactgtctcaatt 2225070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 265 - 322
Target Start/End: Original strand, 7583483 - 7583540
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    |||| |||||||| ||| || |||||||||||||| ||||||||||| ||| ||||||    
T  7583483 gtccattaacttattttcggatttcattttggtccactaactataaagtgtctcaatt 7583540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 265 - 322
Target Start/End: Complemental strand, 19579397 - 19579340
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    |||| |||||||| ||| || ||||||||||||||| |||||||||| ||| ||||||    
T  19579397 gtcccttaacttattttcggatttcattttggtcccttaactataaagtgtctcaatt 19579340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 370 - 407
Target Start/End: Complemental strand, 24753499 - 24753462
Alignment:
Q  370 tttttaacatcaaatgtctaaggtgaaccatgtttaaa 407  Q
    |||||||| |||||||||||||||||||||| ||||||    
T  24753499 tttttaacttcaaatgtctaaggtgaaccatctttaaa 24753462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 265 - 322
Target Start/End: Original strand, 39287483 - 39287540
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    |||| |||||||| ||| || |||||||||||||| ||||||||||| ||| ||||||    
T  39287483 gtcccttaacttattttcggatttcattttggtcctctaactataaagtgtctcaatt 39287540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 265 - 318
Target Start/End: Complemental strand, 42213512 - 42213459
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttc 318  Q
    |||||||||||||||||| | |||| |||||||||| ||||||| ||| |||||    
T  42213512 gtcctttaacttactttttggtttcgttttggtcccttaactattaaaagtttc 42213459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 265 - 326
Target Start/End: Original strand, 42570025 - 42570086
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaattggtc 326  Q
    |||| |||||||| |||||  ||||| ||||||||||||||| |||| ||| ||||||||||    
T  42570025 gtcccttaacttatttttgaatttcaatttggtcccctaactttaaactgtctcaattggtc 42570086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 380 - 429
Target Start/End: Original strand, 42685008 - 42685057
Alignment:
Q  380 caaatgtctaaggtgaaccatgtttaaaggtggtccaccataaaccttat 429  Q
    |||||||||| ||||||||| | ||||  |||||||||||||||||||||    
T  42685008 caaatgtctatggtgaaccaagcttaagagtggtccaccataaaccttat 42685057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 265 - 322
Target Start/End: Original strand, 48252946 - 48253003
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    |||| |||||||| | || ||||| |||||||||||||||||||||| ||| ||||||    
T  48252946 gtcccttaacttattctttgtttttattttggtcccctaactataaagtgtctcaatt 48253003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 265 - 322
Target Start/End: Complemental strand, 53049140 - 53049083
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    |||| |||||||| ||| || ||| |||||||||||||||||||||| ||| ||||||    
T  53049140 gtcccttaacttattttcggattttattttggtcccctaactataaagtgtctcaatt 53049083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 100; Significance: 4e-49; HSPs: 57)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 251 - 429
Target Start/End: Original strand, 9633774 - 9633953
Alignment:
Q  251 taattcataatttagtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt-ggtcttataaatattttgtcgtttacc 349  Q
    |||| |||||||| ||||||||||||| |||||||||||||||||||||| |||||||||| ||| |||||| |||  ||||||| ||    |||||||     
T  9633774 taatacataatttggtcctttaacttatttttggttttcattttggtcccttaactataaagtgtctcaatttggttatataaatcttcaaccgtttaca 9633873  T
Q  350 gttttggtcctctccattaatttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccataaaccttat 429  Q
    |||||| |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  9633874 gttttgatcctctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccatagaccttat 9633953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 251 - 421
Target Start/End: Complemental strand, 26056264 - 26056093
Alignment:
Q  251 taattcataatttagtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt-ggtcttataaatattttgtcgtttacc 349  Q
    |||| |||| ||| |||| |||||||| |||||| |||||||||||||||||||||||||| ||| |||||| ||||  |||||| |||||||||||||     
T  26056264 taatacatactttggtcccttaacttatttttggatttcattttggtcccctaactataaagtgtctcaatttggtcccataaatcttttgtcgtttact 26056165  T
Q  350 gttttggtcctctccattaatttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccata 421  Q
     |||||||||||||| |||  ||||||||||||| |||||| ||||||||| |||||||||||| |||||||    
T  26056164 attttggtcctctccgttagattttaacatcaaaagtctaaagtgaaccatatttaaaggtggttcaccata 26056093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 265 - 449
Target Start/End: Complemental strand, 49141599 - 49141414
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaa-ttggtcttataaatattttgtcgtttaccgttttggtcctctc 363  Q
    ||||||||| ||| |||||||||||| || | |||| ||||||| || |||||||| ||||||  |||| | || || |||||||| |||| ||| ||||    
T  49141599 gtcctttaatttatttttggttttcacttcgatcccttaactattaagtgtttcaaattggtcccataatttttctgccgtttaccattttagtcatctc 49141500  T
Q  364 cattaatttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccataaaccttataagttcatttaattttaacc 449  Q
    | ||| ||||||||||||||||||||||||||||||| ||||||| || ||||||||| ||||||||| |||||||||||||||||    
T  49141499 cgttagtttttaacatcaaatgtctaaggtgaaccatatttaaagttgttccaccatagaccttataaattcatttaattttaacc 49141414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 251 - 426
Target Start/End: Complemental strand, 52743093 - 52742917
Alignment:
Q  251 taattcataatttagtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaa-ttggtcttataaatattttgtcgtttacc 349  Q
    |||| ||| |||| |||| ||| |||| ||||  |||||| |||||||||||||||||||| ||| |||| ||||||   ||  | || ||||||||||     
T  52743093 taatacatcatttggtcccttagcttatttttcattttcactttggtcccctaactataaagtgtctcaaattggtcccttaggttttatgtcgtttact 52742994  T
Q  350 gttttggtcctctccattaatttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccataaacct 426  Q
    ||| ||||||||||| ||| ||||||||||||||||| |||||||||||||||||||||||||| ||||||| ||||    
T  52742993 gttatggtcctctccgttagtttttaacatcaaatgtttaaggtgaaccatgtttaaaggtggtacaccatagacct 52742917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 251 - 429
Target Start/End: Original strand, 21276993 - 21277172
Alignment:
Q  251 taattcataatttagtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt-ggtcttataaatattttgtcgtttacc 349  Q
    |||| ||| |||| |||| |||||||| |||||||||||| ||||||  |||||||||||| | | |||||| ||||  |||||| || || |||||||     
T  21276993 taatacattatttggtcccttaacttatttttggttttcaatttggttgcctaactataaagtatctcaatttggtcccataaatcttctgccgtttact 21277092  T
Q  350 gttttggtcctctccattaatttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccataaaccttat 429  Q
     ||||| |||||||||||| ||||| || | |||||||||||||||||||  |||| ||||||||||||||| |||||||    
T  21277093 attttgatcctctccattagtttttgaccttaaatgtctaaggtgaaccaactttataggtggtccaccatagaccttat 21277172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 251 - 429
Target Start/End: Original strand, 44977220 - 44977399
Alignment:
Q  251 taattcataatttagtcctttaacttacttttggttttcattttggtcccctaactataaaatgt-ttcaattggtcttataaatattttgtcgtttacc 349  Q
    |||| ||| |||| |||| |||||||| |||||||||||| |||||||||||||||||||| ||| || || |||||   ||  | || || ||||  |     
T  44977220 taatacattatttggtcccttaacttatttttggttttcactttggtcccctaactataaagtgtcttaaactggtcccttatgtcttctgccgttacct 44977319  T
Q  350 gttttggtcctctccattaatttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccataaaccttat 429  Q
      ||||||| ||||  ||| ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  44977320 catttggtcatctctgttagtttttaacatcaaatgtctaaggtgaaccatatttaaaggtggtccaccgtaaaccttat 44977399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 260 - 429
Target Start/End: Complemental strand, 13930783 - 13930613
Alignment:
Q  260 atttagtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaa-ttggtcttataaatattttgtcgtttaccgttttggtc 358  Q
    |||| |||| |||||||| |||||||||||| |||||||| ||||||||||| ||| |||| ||||||  |||| | || ||||||||||| ||||||||    
T  13930783 atttggtcccttaacttatttttggttttcaatttggtcctctaactataaagtgtctcaatttggtcccataagtcttatgtcgtttaccattttggtc 13930684  T
Q  359 ctctccattaatttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccataaaccttat 429  Q
    || ||| ||  |||||||| | |||||||||  ||||| ||  |||| | |||||| |||||| |||||||    
T  13930683 ctttccgtttgtttttaaccttaaatgtctattgtgaaacaactttatatgtggtctaccatagaccttat 13930613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 292 - 429
Target Start/End: Original strand, 14169659 - 14169797
Alignment:
Q  292 tttggtcccctaactataaaatgtttcaatt-ggtcttataaatattttgtcgtttaccgttttggtcctctccattaatttttaacatcaaatgtctaa 390  Q
    ||||||||  |||||||||||||| |||||| ||||  |||||| |||||||||||||  |||||||| | ||  ||| |||||||| | ||||||||||    
T  14169659 tttggtcctttaactataaaatgtctcaatttggtcccataaatcttttgtcgtttactattttggtcttatctgttagtttttaaccttaaatgtctaa 14169758  T
Q  391 ggtgaaccatgtttaaaggtggtccaccataaaccttat 429  Q
    |||||||||  |||| |||||| |||||||| |||||||    
T  14169759 ggtgaaccaactttataggtggcccaccatagaccttat 14169797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 353 - 421
Target Start/End: Complemental strand, 51218980 - 51218912
Alignment:
Q  353 ttggtcctctccattaatttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccata 421  Q
    |||||||||||| ||| ||||||||||||||||||||| ||||||||| ||||||| ||||||||||||    
T  51218980 ttggtcctctccgttagtttttaacatcaaatgtctaaagtgaaccatatttaaagatggtccaccata 51218912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 251 - 452
Target Start/End: Original strand, 50678365 - 50678563
Alignment:
Q  251 taattcataatttagtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaattggtcttataaatattttgtcgtttaccg 350  Q
    |||| ||| |||| |||| |||||||| |||||  |||||||||| |||| |||||||||||||| |||||| | | | ||||| | | | ||||  |      
T  50678365 taatacatgatttggtcccttaacttatttttgaatttcattttgatcccttaactataaaatgtctcaatttggcct-taaatctct-gccgttacctc 50678462  T
Q  351 ttttggtcctctccattaatttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccataaacctta-taagttcatttaattttaacc 449  Q
    |||||||||||||  ||| ||||||||||||||  ||||||||||||||| |||||||||||| ||||||| ||| || ||| ||  |||||||||||||    
T  50678463 ttttggtcctctctgttagtttttaacatcaaaactctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaatt--tttaattttaacc 50678560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 251 - 364
Target Start/End: Complemental strand, 25787281 - 25787167
Alignment:
Q  251 taattcataatttagtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaa-ttggtcttataaatattttgtcgtttacc 349  Q
    |||| ||| |||| |||| |||||||| |||||||||||| |||||||||||||||||||| ||| |||| ||||||| |||||| || || | |||||     
T  25787281 taatacatcatttggtcccttaacttatttttggttttcaatttggtcccctaactataaagtgtctcaatttggtctcataaatcttatgccatttact 25787182  T
Q  350 gttttggtcctctcc 364  Q
     ||||||||||||||    
T  25787181 attttggtcctctcc 25787167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 351 - 429
Target Start/End: Original strand, 27689383 - 27689461
Alignment:
Q  351 ttttggtcctctccattaatttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccataaaccttat 429  Q
    |||||||||||||| ||| ||||||||| ||||||||||| ||||||||| ||||||||||||||| |||  |||||||    
T  27689383 ttttggtcctctccgttagtttttaacaccaaatgtctaaagtgaaccatatttaaaggtggtccatcatggaccttat 27689461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 265 - 362
Target Start/End: Complemental strand, 42248408 - 42248310
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaa-ttggtcttataaatattttgtcgtttaccgttttggtcctct 362  Q
    |||||| |||||| |||||| ||||||||||||||| |||||||||| ||| |||| |||||| ||||||| || ||||||||||| |||| |||||||    
T  42248408 gtccttcaacttatttttggatttcattttggtcccataactataaagtgtctcaatttggtcctataaatcttatgtcgtttaccattttagtcctct 42248310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 251 - 363
Target Start/End: Original strand, 25785967 - 25786080
Alignment:
Q  251 taattcataatttagtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaa-ttggtcttataaatattttgtcgtttacc 349  Q
    |||| ||| |||| |||| |||||||| |||||||||||| |||||||||||||||||||| ||| |||| ||||||  |||||| || |||||||||      
T  25785967 taatacatcatttggtcccttaacttatttttggttttcaatttggtcccctaactataaagtgtctcaatttggtcccataaatcttatgtcgtttatt 25786066  T
Q  350 gttttggtcctctc 363  Q
     |||||||||||||    
T  25786067 attttggtcctctc 25786080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 321 - 421
Target Start/End: Original strand, 14764299 - 14764399
Alignment:
Q  321 ttggtcttataaatattttgtcgtttaccgttttggtcctctccattaatttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccat 420  Q
    ||||||| |||| | || |||||||||| ||||| ||| ||||  ||| |||||||||| |||||| ||||||||||| | |||||||||||||||||||    
T  14764299 ttggtctcataagtcttctgtcgtttactgttttagtcatctctgttagtttttaacattaaatgtttaaggtgaaccttatttaaaggtggtccaccat 14764398  T
Q  421 a 421  Q
    |    
T  14764399 a 14764399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 251 - 374
Target Start/End: Original strand, 47560138 - 47560262
Alignment:
Q  251 taattcataatttagtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaa-ttggtcttataaatattttgtcgtttacc 349  Q
    |||| ||| |||| |||| ||| |||| ||| | |||||| |||||||||||||||||||| |||||||| ||| || | |||||||| || |||||||     
T  47560138 taatacatcatttggtcccttaccttattttcgattttcactttggtcccctaactataaagtgtttcaatttgatcctttaaatattctgccgtttact 47560237  T
Q  350 gttttggtcctctccattaattttt 374  Q
    ||||||||| ||||| |||||||||    
T  47560238 gttttggtcatctccgttaattttt 47560262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 329 - 429
Target Start/End: Complemental strand, 51726882 - 51726782
Alignment:
Q  329 ataaatattttgtcgtttaccgttttggtcctctccattaatttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccataaacctta 428  Q
    |||||| || ||||||||||  |||| |||||| || ||| |||||||| | |||||||||||||||||||  |||| ||||||||||||||| ||||||    
T  51726882 ataaatcttctgtcgtttactattttagtcctcaccgttagtttttaaccttaaatgtctaaggtgaaccaactttataggtggtccaccatagacctta 51726783  T
Q  429 t 429  Q
    |    
T  51726782 t 51726782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 251 - 389
Target Start/End: Complemental strand, 14071320 - 14071181
Alignment:
Q  251 taattcataatttagtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaa-ttggtcttataaatattttgtcgtttacc 349  Q
    |||| ||| |||| |||| |||| ||| |||||||||||| |||||||| ||||||||||| ||| |||| ||||||  |||| | || |||||||||||    
T  14071320 taatacatcatttggtcccttaatttatttttggttttcaatttggtcctctaactataaagtgtctcaatttggtcccataagtcttctgtcgtttacc 14071221  T
Q  350 gttttggtcctctccattaatttttaacatcaaatgtcta 389  Q
     |||||||||| ||| ||  |||||||| | |||||||||    
T  14071220 attttggtcctttccgtttgtttttaaccttaaatgtcta 14071181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 251 - 420
Target Start/End: Complemental strand, 23082243 - 23082073
Alignment:
Q  251 taattcataatttagtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt-ggtcttataaatattttgtcgtttacc 349  Q
    |||| ||| |||||||||||||| ||| || |  ||||||   ||||||| |||||| |||| ||||||||| ||||   || || || |||||||  |     
T  23082243 taatacatcatttagtcctttaatttaattctttttttcaaaatggtcccttaactaaaaaacgtttcaatttggtcccttatattttctgtcgttgcct 23082144  T
Q  350 gttttggtcctctccattaatttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccat 420  Q
     |||||||||| ||| ||| ||||||||| ||||| ||||| ||||||||| |||||||||||||||||||    
T  23082143 cttttggtcctttccgttagtttttaacaccaaatatctaaagtgaaccatatttaaaggtggtccaccat 23082073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 251 - 364
Target Start/End: Original strand, 47410983 - 47411097
Alignment:
Q  251 taattcataatttagtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaa-ttggtcttataaatattttgtcgtttacc 349  Q
    |||| |||||||| |||| |||| ||| ||||| |||||| |||| ||||||||||||||| ||| |||| ||||||| |||||| || ||||||||||     
T  47410983 taatacataatttggtcccttaaattatttttgattttcaatttgatcccctaactataaagtgtctcaatttggtctcataaatcttatgtcgtttact 47411082  T
Q  350 gttttggtcctctcc 364  Q
     |||||||| |||||    
T  47411083 attttggtcatctcc 47411097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 270 - 374
Target Start/End: Original strand, 13641275 - 13641380
Alignment:
Q  270 ttaacttacttttggttttcattttggtcccctaactataaaatgtttcaa-ttggtcttataaatattttgtcgtttaccgttttggtcctctccatta 368  Q
    |||||||| |||||||||||| |||||||||||||||||||| ||| |||| ||||||  |||||| || || |||||||  |||||||| ||||| |||    
T  13641275 ttaacttatttttggttttcactttggtcccctaactataaagtgtctcaatttggtcccataaatcttctgccgtttactattttggtcatctccgtta 13641374  T
Q  369 attttt 374  Q
     |||||    
T  13641375 tttttt 13641380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 351 - 420
Target Start/End: Complemental strand, 22766836 - 22766767
Alignment:
Q  351 ttttggtcctctccattaatttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccat 420  Q
    |||||||||| ||| ||| ||||||||| ||||| ||||| ||||||||| |||||||||||||||||||    
T  22766836 ttttggtcctttccgttagtttttaacaccaaatatctaaagtgaaccatatttaaaggtggtccaccat 22766767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 351 - 420
Target Start/End: Complemental strand, 37624586 - 37624517
Alignment:
Q  351 ttttggtcctctccattaatttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccat 420  Q
    |||||||||||||| ||| ||||||||||||||||||||| ||||||||| || |||||| || ||||||    
T  37624586 ttttggtcctctccgttagtttttaacatcaaatgtctaaagtgaaccatattaaaaggttgtgcaccat 37624517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 271 - 358
Target Start/End: Original strand, 26054916 - 26055004
Alignment:
Q  271 taacttacttttggttttcattttggtcccctaactataaaatgtttcaa-ttggtcttataaatattttgtcgtttaccgttttggtc 358  Q
    ||||||| |||||| |||||||||||||||||||||||||| |||||||| |||||   |||||| || ||||||||||  ||||||||    
T  26054916 taacttatttttggatttcattttggtcccctaactataaagtgtttcaatttggttccataaatcttctgtcgtttactattttggtc 26055004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 270 - 364
Target Start/End: Complemental strand, 47136785 - 47136690
Alignment:
Q  270 ttaacttacttttggttttcattttggtcccctaactataaaatgtttcaa-ttggtcttataaatattttgtcgtttaccgttttggtcctctcc 364  Q
    |||||||| |||||||||||| || ||||||||||||||||| ||| |||| ||||| | |||||| || || |||||||  ||||||||||||||    
T  47136785 ttaacttatttttggttttcaattaggtcccctaactataaagtgtctcaatttggtgtcataaatcttatgccgtttactattttggtcctctcc 47136690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 257 - 370
Target Start/End: Complemental strand, 52181416 - 52181302
Alignment:
Q  257 ataatttagtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaa-ttggtcttataaatattttgtcgtttaccgttttg 355  Q
    ||||||| ||||||||||||| ||||  |||||| |||||||| ||||||||||| ||| |||| || |||| |||||| || ||| ||||||  |||||    
T  52181416 ataatttggtcctttaacttattttttattttcaatttggtcctctaactataaagtgtctcaatttagtctcataaatcttatgttgtttactattttg 52181317  T
Q  356 gtcctctccattaat 370  Q
    ||| ||||| |||||    
T  52181316 gtcatctccgttaat 52181302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 260 - 364
Target Start/End: Complemental strand, 3979421 - 3979316
Alignment:
Q  260 atttagtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaa-ttggtcttataaatattttgtcgtttaccgttttggtc 358  Q
    |||| |||| |||||||| |||||| ||||||||||||||| |||||||||| ||| |||| ||||||  |||| | || || |||||||  ||||||||    
T  3979421 atttggtcccttaacttatttttggatttcattttggtcccttaactataaagtgtctcaatttggtcccataattcttctgccgtttactattttggtc 3979322  T
Q  359 ctctcc 364  Q
    ||||||    
T  3979321 ctctcc 3979316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 265 - 429
Target Start/End: Complemental strand, 13642660 - 13642495
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttca-attggtcttataaatattttgtcgtttaccgttttggtcctctc 363  Q
    ||||||||||||| ||||||||||||||||||||| |||| | |||| ||| |||  ||| ||  |||| |||| || ||||||   ||||||||   ||    
T  13642660 gtcctttaacttatttttggttttcattttggtcctctaattttaaagtgtctcagtttgatcccataactattctgccgtttataattttggtctcttc 13642561  T
Q  364 cattaatttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccataaaccttat 429  Q
    | ||| |||||||| | |||||||||||||| || |  |||| |||||||| ||||||||| ||||    
T  13642560 cgttagtttttaaccttaaatgtctaaggtggacgaactttacaggtggtctaccataaactttat 13642495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 351 - 420
Target Start/End: Complemental strand, 30551605 - 30551536
Alignment:
Q  351 ttttggtcctctccattaatttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccat 420  Q
    |||||||| ||||| ||| |||||| |||||||||||||| ||||||||| || ||||||||| ||||||    
T  30551605 ttttggtcatctccgttagtttttagcatcaaatgtctaaagtgaaccatattaaaaggtggtgcaccat 30551536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 265 - 364
Target Start/End: Original strand, 14390271 - 14390371
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaa-ttggtcttataaatattttgtcgtttaccgttttggtcctctc 363  Q
    |||| |||||||| ||||   |||||||||||||| ||||||||||||||| |||| |||||   |||||| || | ||||||||| |||||||||||||    
T  14390271 gtcccttaacttattttttaatttcattttggtcctctaactataaaatgtctcaatttggttccataaatcttctttcgtttaccattttggtcctctc 14390370  T
Q  364 c 364  Q
    |    
T  14390371 c 14390371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 251 - 334
Target Start/End: Original strand, 49139800 - 49139884
Alignment:
Q  251 taattcataatttagtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaa-ttggtcttataaat 334  Q
    |||| ||| |||| |||| |||||||| ||||||||||| |||||||||| |||||||||| ||| |||| ||||||| ||||||    
T  49139800 taatacatcatttggtcccttaacttatttttggttttcgttttggtcccataactataaagtgtctcaatttggtctcataaat 49139884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 342 - 429
Target Start/End: Original strand, 8092689 - 8092776
Alignment:
Q  342 cgtttaccgttttggtcctctccattaatttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccataaaccttat 429  Q
    ||||||| | ||||||||| ||| ||| | |||||| | |||| ||||||||||||||  |||| ||||||||||||||| |||||||    
T  8092689 cgtttactgatttggtcctttccgttagtatttaaccttaaatatctaaggtgaaccaactttataggtggtccaccatagaccttat 8092776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 280 - 374
Target Start/End: Original strand, 9592266 - 9592361
Alignment:
Q  280 tttggttttcattttggtcccctaactataaaatgtttcaa-ttggtcttataaatattttgtcgtttaccgttttggtcctctccattaattttt 374  Q
    |||| |||||| |||||||||||||||||||| |||||||| ||| ||  |||||| |||||||||||||  ||||| || | ||| |||||||||    
T  9592266 tttgattttcactttggtcccctaactataaagtgtttcaatttgatcccataaatcttttgtcgtttactattttgatcatttccgttaattttt 9592361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 251 - 322
Target Start/End: Original strand, 13929294 - 13929365
Alignment:
Q  251 taattcataatttagtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    |||| ||| |||| |||| |||||||| |||||||||||| ||||||||| |||||||||| ||| ||||||    
T  13929294 taatacatcatttggtcccttaacttatttttggttttcaatttggtcccttaactataaagtgtctcaatt 13929365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 292 - 394
Target Start/End: Original strand, 36509851 - 36509954
Alignment:
Q  292 tttggtcccctaactataaaatgtttcaatt-ggtcttataaatattttgtcgtttaccgttttggtcctctccattaatttttaacatcaaatgtctaa 390  Q
    ||||||||| |||||||||| |||||||||| |||   |||||| || || |||||||  ||||||| |||||| ||| |||||||| |||||||||||     
T  36509851 tttggtcccttaactataaagtgtttcaatttggttccataaatcttctgccgtttactattttggttctctccgttagtttttaacctcaaatgtctat 36509950  T
Q  391 ggtg 394  Q
    ||||    
T  36509951 ggtg 36509954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 260 - 322
Target Start/End: Original strand, 48467269 - 48467331
Alignment:
Q  260 atttagtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    |||| |||| |||||||| |||| ||||||| |||||| ||||||||||||| ||||||||||    
T  48467269 atttggtcccttaacttattttttgttttcaatttggttccctaactataaagtgtttcaatt 48467331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 265 - 322
Target Start/End: Original strand, 2236826 - 2236883
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    |||| |||||||| ||| || |||||||||||||||||||||||||| ||| ||||||    
T  2236826 gtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatt 2236883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 265 - 322
Target Start/End: Original strand, 34531676 - 34531733
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    |||| |||||||| ||| || |||||||||||||| ||||||||||||||| ||||||    
T  34531676 gtcccttaacttattttcggatttcattttggtcctctaactataaaatgtctcaatt 34531733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 265 - 322
Target Start/End: Original strand, 35683068 - 35683125
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    |||| |||||||| ||| || |||||||||||||||||||||||||| ||| ||||||    
T  35683068 gtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatt 35683125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 261 - 322
Target Start/End: Complemental strand, 40135444 - 40135383
Alignment:
Q  261 tttagtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    |||||||| |||||||| |||| | |||||||||||||| |||||| |||||||| ||||||    
T  40135444 tttagtcccttaacttatttttagatttcattttggtcctctaactttaaaatgtctcaatt 40135383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 261 - 322
Target Start/End: Original strand, 48934250 - 48934311
Alignment:
Q  261 tttagtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    |||| ||| |||||||| ||| || |||||||||||||||||||||||||| ||| ||||||    
T  48934250 tttaatcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatt 48934311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 265 - 322
Target Start/End: Complemental strand, 48935213 - 48935156
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    |||| |||||||| ||| || |||||||||||||||||||||||||| ||| ||||||    
T  48935213 gtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatt 48935156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 563 - 611
Target Start/End: Complemental strand, 49141291 - 49141243
Alignment:
Q  563 tcatctccttcatcaacacattcatactctttagtcaattttcatataa 611  Q
    ||||||||||||||| |||||||| |||| ||||||||| |||||||||    
T  49141291 tcatctccttcatcatcacattcacactccttagtcaatcttcatataa 49141243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 251 - 369
Target Start/End: Original strand, 3978043 - 3978162
Alignment:
Q  251 taattcataatttagtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaa-ttggtcttataaatattttgtcgtttacc 349  Q
    |||| ||| |||| |||| |||||||| |||||  ||||||||||||||  |||||||||| ||| |||| ||| ||  |||| | || ||||||||||     
T  3978043 taatacatcatttggtcccttaacttatttttgaatttcattttggtcctttaactataaagtgtctcaatttgatcccataattcttctgtcgtttact 3978142  T
Q  350 gttttggtcctctccattaa 369  Q
     |||||||||||||| ||||    
T  3978143 attttggtcctctccgttaa 3978162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 292 - 394
Target Start/End: Complemental strand, 19466281 - 19466178
Alignment:
Q  292 tttggtcccctaactataaaatgtttcaatt-ggtcttataaatattttgtcgtttaccgttttggtcctctccattaatttttaacatcaaatgtctaa 390  Q
    ||||||||  |||||||||| ||| |||||| ||||  |||||| || ||||||||||  || |||| |||||| ||| |||||||| |||||||||||     
T  19466281 tttggtcctttaactataaagtgtctcaatttggtcccataaatcttctgtcgtttactattgtggttctctccgttagtttttaacctcaaatgtctat 19466182  T
Q  391 ggtg 394  Q
    ||||    
T  19466181 ggtg 19466178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 270 - 320
Target Start/End: Original strand, 28999858 - 28999908
Alignment:
Q  270 ttaacttacttttggttttcattttggtcccctaactataaaatgtttcaa 320  Q
    |||||||| |||||  ||||||||||||||| ||||| |||||||||||||    
T  28999858 ttaacttatttttgaatttcattttggtcccttaactttaaaatgtttcaa 28999908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 270 - 320
Target Start/End: Original strand, 33793797 - 33793847
Alignment:
Q  270 ttaacttacttttggttttcattttggtcccctaactataaaatgtttcaa 320  Q
    |||||||| |||||||||||| ||||||||||||| |||||| ||| ||||    
T  33793797 ttaacttatttttggttttcactttggtcccctaattataaagtgtctcaa 33793847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 467 - 509
Target Start/End: Complemental strand, 49141393 - 49141351
Alignment:
Q  467 aaaaagagaaccgtttgatcatataagtatgttgtatcttacg 509  Q
    ||||||||||| ||| |||||||||||| ||||||||||||||    
T  49141393 aaaaagagaacagttggatcatataagtctgttgtatcttacg 49141351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 270 - 311
Target Start/End: Complemental strand, 1061550 - 1061509
Alignment:
Q  270 ttaacttacttttggttttcattttggtcccctaactataaa 311  Q
    |||||||| |||||| ||||||||| ||||||||||||||||    
T  1061550 ttaacttatttttggatttcattttagtcccctaactataaa 1061509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 265 - 322
Target Start/End: Complemental strand, 2238081 - 2238024
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    |||| |||||||| ||| || ||||||||||||||| |||||||||| ||| ||||||    
T  2238081 gtcccttaacttattttcggatttcattttggtcccataactataaagtgtctcaatt 2238024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 265 - 318
Target Start/End: Complemental strand, 7204287 - 7204234
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttc 318  Q
    |||| ||||||||||||| | ||||||||||||||| ||||||| ||| |||||    
T  7204287 gtcccttaacttactttttggtttcattttggtcccttaactattaaaagtttc 7204234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 265 - 322
Target Start/End: Complemental strand, 9123502 - 9123445
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    |||| |||||||| ||| || ||| ||||||||||| |||||||||| ||||||||||    
T  9123502 gtcccttaacttattttcggattttattttggtcccttaactataaagtgtttcaatt 9123445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 265 - 322
Target Start/End: Complemental strand, 34532805 - 34532748
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    ||||||||||||| ||| |  ||| |||||||||||||||||||||| ||| ||||||    
T  34532805 gtcctttaacttattttcgaattttattttggtcccctaactataaagtgtctcaatt 34532748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 265 - 322
Target Start/End: Original strand, 38458099 - 38458156
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    |||| |||||||| |||||| ||||| ||||||||||||||| |||| ||| ||||||    
T  38458099 gtcccttaacttatttttggatttcaatttggtcccctaactttaaattgtctcaatt 38458156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 265 - 322
Target Start/End: Original strand, 42244517 - 42244574
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    |||| |||||||| |||||| |||||||||||||   |||||||||||||| ||||||    
T  42244517 gtcccttaacttatttttggatttcattttggtcatataactataaaatgtctcaatt 42244574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 265 - 322
Target Start/End: Complemental strand, 50679924 - 50679867
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    |||| |||||||| |||| ||||| ||||||||||| |||||||||| ||| ||||||    
T  50679924 gtcccttaacttatttttagtttttattttggtcccttaactataaagtgtctcaatt 50679867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 265 - 322
Target Start/End: Original strand, 51424264 - 51424321
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    |||| |||||||| |||||| ||||||||||||||| ||| |||||| ||| ||||||    
T  51424264 gtcccttaacttatttttggatttcattttggtcccttaattataaagtgtctcaatt 51424321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 96; Significance: 1e-46; HSPs: 56)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 270 - 428
Target Start/End: Original strand, 117066 - 117225
Alignment:
Q  270 ttaacttacttttggttttcattttggtcccctaactataaaatgtttcaattgg-tcttataaatattttgtcgtttaccgttttggtcctctccatta 368  Q
    |||||||| |||||||||||||||||||||||||| ||||||||||||||||| | ||  |||||| || |||||||||  ||||||||||||||| |||    
T  117066 ttaacttatttttggttttcattttggtcccctaattataaaatgtttcaatttgatcccataaatcttctgtcgtttattgttttggtcctctccgtta 117165  T
Q  369 atttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccataaacctta 428  Q
     ||||||||||||||||||||||||||  |||||||||||||||||||||||| ||||||    
T  117166 gtttttaacatcaaatgtctaaggtgagtcatgtttaaaggtggtccaccatagacctta 117225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 267 - 429
Target Start/End: Original strand, 7486092 - 7486255
Alignment:
Q  267 cctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt-ggtcttataaatattttgtcgtttaccgttttggtcctctcca 365  Q
    ||||||| ||| ||||||||||||||||| |||| |||||||||| || ||||||| ||||  |||||| |||||  ||||||  ||||||||||||||     
T  7486092 cctttaatttatttttggttttcattttgatcccttaactataaagtgcttcaatttggtcccataaatcttttgctgtttactattttggtcctctccg 7486191  T
Q  366 ttaatttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccataaaccttat 429  Q
    ||| ||||||||||||||||||||| |||||||||||||||| || |||||||||| |||||||    
T  7486192 ttagtttttaacatcaaatgtctaaagtgaaccatgtttaaatgttgtccaccatagaccttat 7486255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 251 - 429
Target Start/End: Original strand, 36756063 - 36756242
Alignment:
Q  251 taattcataatttagtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaat-tggtcttataaatattttgtcgtttacc 349  Q
    |||| ||| |||| |||| |||||||| |||| ||||| | ||||||||| |||||||||| ||||||||| |||||  |||||| || ||||||||||     
T  36756063 taatacatcatttggtcccttaacttatttttagtttttaatttggtcccataactataaagtgtttcaatctggtcacataaatcttatgtcgtttact 36756162  T
Q  350 gttttggtcctctccattaatttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccataaaccttat 429  Q
     |||||||| ||||| ||| ||||||||||||||| ||||||||||| ||| |||||||||||| |||||||| ||||||    
T  36756163 attttggtcatctccgttagtttttaacatcaaatttctaaggtgaatcatatttaaaggtggttcaccataagccttat 36756242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 270 - 420
Target Start/End: Complemental strand, 39546775 - 39546624
Alignment:
Q  270 ttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt-ggtcttataaatattttgtcgtttaccgttttggtcctctccatta 368  Q
    |||||||| |||  ||||||| |||||| |||||||| |||| ||| |||||| ||||  ||||||||| || ||||||||||||||||| ||||| |||    
T  39546775 ttaacttattttctgttttcactttggttccctaactttaaagtgtctcaatttggtcccataaatattatgccgtttaccgttttggtcatctccgtta 39546676  T
Q  369 atttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccat 420  Q
     ||||||||||||||||| |||| ||||||||||||||||||||||||||||    
T  39546675 gtttttaacatcaaatgtttaagatgaaccatgtttaaaggtggtccaccat 39546624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 321 - 528
Target Start/End: Original strand, 36938751 - 36938956
Alignment:
Q  321 ttggtcttataaatattttgtcgtttaccgttttggtcctctccattaatttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccat 420  Q
    ||||||| |||||| || || |||||||  |||||||| ||||  ||||||||||||||||||| ||||| ||||||||| |||||||||||| ||||||    
T  36938751 ttggtctcataaatcttctgccgtttactattttggtcttctctgttaatttttaacatcaaatatctaaagtgaaccatatttaaaggtggttcaccat 36938850  T
Q  421 aaaccttataagttcatttaattttaaccattcgatannnnnnnncaaaaagagaaccgtttgatcatataagtatgttgtatcttacgatgaactatca 520  Q
    | | ||||||| ||||||||||||||||| || ||||         |||| |||||||||| ||||||||| || |||||||||||| | ||||  ||||    
T  36938851 aca-cttataaattcatttaattttaaccctttgatattttttta-aaaaggagaaccgttggatcatataggtctgttgtatcttaaggtgaatcatca 36938948  T
Q  521 acacctaa 528  Q
    ||||||||    
T  36938949 acacctaa 36938956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 351 - 452
Target Start/End: Complemental strand, 44103312 - 44103210
Alignment:
Q  351 ttttggtcctctccattaatttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccataaacctta-taagttcatttaattttaacc 449  Q
    |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||| ||| ||  |||||||||||||    
T  44103312 ttttggtcctctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccatatgccttattaattttttttaattttaacc 44103213  T
Q  450 att 452  Q
    |||    
T  44103212 att 44103210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 285 - 429
Target Start/End: Complemental strand, 13367133 - 13366988
Alignment:
Q  285 ttttcattttggtcccctaactataaaatgtttcaatt-ggtcttataaatattttgtcgtttaccgttttggtcctctccattaatttttaacatcaaa 383  Q
    |||||| ||||||||| |||||||||| ||||| |||| ||||  |||||| || || |||||||  |||||||||||||| ||| |||||||| | |||    
T  13367133 ttttcactttggtcccttaactataaagtgttttaatttggtcccataaatcttctgccgtttactattttggtcctctccgttagtttttaaccttaaa 13367034  T
Q  384 tgtctaaggtgaaccatgtttaaaggtggtccaccataaaccttat 429  Q
    ||||||||||||||||  |||| ||||||||||||||| |||||||    
T  13367033 tgtctaaggtgaaccaactttataggtggtccaccatagaccttat 13366988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 273 - 427
Target Start/End: Original strand, 44606160 - 44606315
Alignment:
Q  273 acttacttttggttttcattttggtcccctaactataaaatgtttcaatt-ggtcttataaatattttgtcgtttaccgttttggtcctctccattaatt 371  Q
    ||||| |||||||||||| |||||||||||||||||| | |||||||||| ||||  |||||| || |   |||||   ||||| |||||||||||| ||    
T  44606160 acttatttttggttttcactttggtcccctaactatatagtgtttcaatttggtcccataaatcttcttctgtttattattttgatcctctccattagtt 44606259  T
Q  372 tttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccataaacctt 427  Q
    |||||| | |||||||||||||||||||  |||| ||||||||||||||| |||||    
T  44606260 tttaaccttaaatgtctaaggtgaaccaactttataggtggtccaccatagacctt 44606315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 351 - 421
Target Start/End: Original strand, 21961923 - 21961993
Alignment:
Q  351 ttttggtcctctccattaatttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccata 421  Q
    |||||||||||||| ||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  21961923 ttttggtcctctccgttagtttttaacatcaaatgtcttaggtgaaccatgtttaaaggtggtccaccata 21961993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 265 - 457
Target Start/End: Complemental strand, 24069549 - 24069356
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaa-ttggtcttataaatattttgtcgtttaccgttttggtcctctc 363  Q
    |||| |||||||| ||||||||||||||||| |||| |||||||||| ||| |||| ||||||  |||| | || || |||||||| |||||||||| ||    
T  24069549 gtcccttaacttatttttggttttcattttgatcccttaactataaagtgtctcaatttggtcccataactcttctgccgtttaccattttggtcctttc 24069450  T
Q  364 cattaatttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccataaacctta-taagttcatttaattttaaccattcgata 457  Q
    | |   |||||||||  |||||||||||||| ||||   ||| ||||||||||||||| |||||| ||||||  |||||||||||||||| ||||    
T  24069449 cgtctgtttttaacactaaatgtctaaggtggaccaacattataggtggtccaccatagaccttactaagtt-ttttaattttaaccatttgata 24069356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 251 - 452
Target Start/End: Complemental strand, 37276360 - 37276158
Alignment:
Q  251 taattcataatttagtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt-ggtcttataaatattttgtcgtttacc 349  Q
    |||| ||| |||| |||| |||| ||| ||||| |||||| |||| |||| |||||||||| ||| |||||| ||||  |||||| ||||| ||||||      
T  37276360 taatacatcatttggtcccttaatttatttttgattttcactttgatcccttaactataaagtgtctcaatttggtcccataaatcttttgccgtttatt 37276261  T
Q  350 gttttggtcctctccattaatttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccataaaccttataagttcatttaattttaacc 449  Q
     | |||||||||||  ||| |||||||||||||| |||||||||||||||| |||||||||||| ||| ||| ||| ||| |  |  |||||||||||||    
T  37276260 atattggtcctctctgttagtttttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcactatagaccatattaaattttttaattttaacc 37276161  T
Q  450 att 452  Q
    |||    
T  37276160 att 37276158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 260 - 429
Target Start/End: Complemental strand, 37324796 - 37324626
Alignment:
Q  260 atttagtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt-ggtcttataaatattttgtcgtttaccgttttggtc 358  Q
    ||||| ||| |||||||| |||||||||| | |||||||||||||||||||||||| |||||| ||||| | |||| ||    | |||||  ||||| |     
T  37324796 atttaatcccttaacttatttttggtttttaatttggtcccctaactataaaatgtctcaatttggtctcaaaaatcttcgaccatttactattttgttt 37324697  T
Q  359 ctctccattaatttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccataaaccttat 429  Q
    |||||| ||||||||| || | |||||||||||||||||||  |||| ||||||||||||||||| |||||    
T  37324696 ctctccgttaatttttcactttaaatgtctaaggtgaaccaactttataggtggtccaccataaatcttat 37324626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 251 - 388
Target Start/End: Original strand, 37472402 - 37472540
Alignment:
Q  251 taattcataatttagtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaa-ttggtcttataaatattttgtcgtttacc 349  Q
    |||| ||| |||| ||||||||||||| |||||||||| | |||||||| ||||||||||| ||| |||| ||||||  |||| | ||||||||||||||    
T  37472402 taatacatcatttcgtcctttaacttatttttggtttttaatttggtcctctaactataaagtgtctcaatttggtcccataagtcttttgtcgtttacc 37472501  T
Q  350 gttttggtcctctccattaatttttaacatcaaatgtct 388  Q
     |||||||||| |||||| ||||||||| | ||||||||    
T  37472502 attttggtcctttccatttatttttaaccttaaatgtct 37472540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 270 - 429
Target Start/End: Complemental strand, 12281877 - 12281718
Alignment:
Q  270 ttaacttacttttggttttcattttggtcccctaactataaaatgtttcaattg-gtcttataaatattttgtcgtttaccgttttggtcctctccatta 368  Q
    |||| ||| ||||| |||||| ||||||||| |||||||||| ||| ||||||  ||||  ||||| || |  |||||||||||||| |||||||| |||    
T  12281877 ttaatttatttttgattttcactttggtcccgtaactataaattgtctcaattttgtctcgtaaattttcta-cgtttaccgttttgatcctctccgtta 12281779  T
Q  369 atttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccataaaccttat 429  Q
     ||||||||||||||| ||||| ||| |||||| || |||||||||||||||| |||||||    
T  12281778 gtttttaacatcaaatatctaatgtggaccatgattcaaggtggtccaccatataccttat 12281718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 270 - 429
Target Start/End: Original strand, 36070196 - 36070356
Alignment:
Q  270 ttaacttacttttggttttcattttggtcccctaactataaaatgtttcaattgg-tcttataaatattttgtcgtttaccgttttggtcctctccatta 368  Q
    |||| ||| |||||||||||| |||||||||||||||||||| ||| |||||| | ||  |||||| || || |||||||  ||||||||||| || |||    
T  36070196 ttaatttatttttggttttcaatttggtcccctaactataaagtgtctcaatttgatcccataaatcttctgccgtttactattttggtcctccccgtta 36070295  T
Q  369 atttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccataaaccttat 429  Q
     | ||| || | |||||||||||||||||||  |||| ||||||||||||||| |||||||    
T  36070296 gtctttgaccttaaatgtctaaggtgaaccaactttataggtggtccaccatagaccttat 36070356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 351 - 429
Target Start/End: Original strand, 10052204 - 10052282
Alignment:
Q  351 ttttggtcctctccattaatttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccataaaccttat 429  Q
    |||||||| ||||| ||| |||||||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||    
T  10052204 ttttggtcatctcctttagtttttaacattaaatgtctaagatgaaccatatttaaaggtggtccaccataaaccttat 10052282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 265 - 421
Target Start/End: Original strand, 35943920 - 35944078
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaaa-tgtttcaatt-ggtcttataaatattttgtcgtttaccgttttggtcctct 362  Q
    |||| |||||||| |||||||||||||||||||||| ||| ||||||| ||| |||||| ||||  |||||| || ||  ||||||  |||||||| |||    
T  35943920 gtcccttaacttatttttggttttcattttggtcccttaattataaaaatgtctcaatttggtcccataaatcttatgcagtttactattttggtcatct 35944019  T
Q  363 ccattaatttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccata 421  Q
    || ||| |||||||| | |||||||||||||||||||  |||| ||||| |||||||||    
T  35944020 ccgttagtttttaactttaaatgtctaaggtgaaccaactttataggtgatccaccata 35944078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 265 - 457
Target Start/End: Original strand, 39515212 - 39515405
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaa-ttggtcttataaatattttgtcgtttaccgttttggtcctctc 363  Q
    |||| |||||||| ||||||||||||||||| |||||| |||||||| ||| |||| ||||||| |||| | ||||| | |||||| |||||||| | ||    
T  39515212 gtcccttaacttatttttggttttcattttgatcccctgactataaagtgtctcaatttggtctcataactcttttgccatttacctttttggtcatttc 39515311  T
Q  364 cattaatttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccataaacctta-taagttcatttaattttaaccattcgata 457  Q
    | |  ||||||||||  |||||||||||||| ||||   ||| |||||||||| |||| |||||| ||||||  | |||||||||||||| ||||    
T  39515312 cgtctatttttaacactaaatgtctaaggtggaccaacattataggtggtccatcatagaccttactaagtt-ttataattttaaccatttgata 39515405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 351 - 452
Target Start/End: Original strand, 13513520 - 13513621
Alignment:
Q  351 ttttggtcctctccattaatttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccataaaccttataagttcatttaattttaacca 450  Q
    |||||||||||||| |||  |||||||||||||||| |||| |||||||| |||||| ||||||||||||| ||||||| | ||  ||||||||||||||    
T  13513520 ttttggtcctctccgttagcttttaacatcaaatgtataagatgaaccatatttaaaagtggtccaccatataccttattaatttttttaattttaacca 13513619  T
Q  451 tt 452  Q
    ||    
T  13513620 tt 13513621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 351 - 452
Target Start/End: Original strand, 13603053 - 13603154
Alignment:
Q  351 ttttggtcctctccattaatttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccataaaccttataagttcatttaattttaacca 450  Q
    |||||||||||||| |||  |||||||||||||||| |||| |||||||| |||||| ||||||||||||| ||||||| | ||  ||||||||||||||    
T  13603053 ttttggtcctctccgttagcttttaacatcaaatgtataagatgaaccatatttaaaagtggtccaccatataccttattaatttttttaattttaacca 13603152  T
Q  451 tt 452  Q
    ||    
T  13603153 tt 13603154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 265 - 421
Target Start/End: Original strand, 19913505 - 19913662
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt-ggtcttataaatattttgtcgtttaccgttttggtcctctc 363  Q
    |||| |||||||| |||||  ||||| |||||||| ||||||||||| |||||||||| ||||  |||| | || ||  ||||| | |||||||||||||    
T  19913505 gtcccttaacttatttttgaatttcaatttggtcctctaactataaagtgtttcaatttggtcccataagtcttctgcggtttatcattttggtcctctc 19913604  T
Q  364 cattaatttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccata 421  Q
    | ||| |||||||| | |||| ||||||||||||||  |||| || ||||||||||||    
T  19913605 cgttagtttttaaccttaaatttctaaggtgaaccaactttatagatggtccaccata 19913662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 351 - 452
Target Start/End: Original strand, 21670164 - 21670265
Alignment:
Q  351 ttttggtcctctccattaatttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccataaaccttataagttcatttaattttaacca 450  Q
    |||||||| ||||| ||| ||||||||||||||| ||||||||||||||| || ||| |||||||||||||  |||||| | ||  ||||||||||||||    
T  21670164 ttttggtcttctccgttagtttttaacatcaaatatctaaggtgaaccatattaaaaagtggtccaccatatgccttattaatttttttaattttaacca 21670263  T
Q  451 tt 452  Q
    ||    
T  21670264 tt 21670265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 251 - 374
Target Start/End: Complemental strand, 36940150 - 36940026
Alignment:
Q  251 taattcataatttagtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaa-ttggtcttataaatattttgtcgtttacc 349  Q
    |||| ||| |||| |||| |||||||| |||||||||||| |||| ||||||||||||||| |||||||| ||||| | |||||| || || |||||||     
T  36940150 taatacatcatttggtcccttaacttatttttggttttcactttgatcccctaactataaagtgtttcaatttggtatcataaatcttctgccgtttact 36940051  T
Q  350 gttttggtcctctccattaattttt 374  Q
     |||||||| ||||| |||||||||    
T  36940050 attttggtcatctccgttaattttt 36940026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 352 - 426
Target Start/End: Original strand, 21267233 - 21267307
Alignment:
Q  352 tttggtcctctccattaatttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccataaacct 426  Q
    ||||||||||||| ||| ||||||||||||||| ||||||||| |||||| || |||||||||||||||| ||||    
T  21267233 tttggtcctctccgttagtttttaacatcaaatatctaaggtggaccatgattcaaggtggtccaccatatacct 21267307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 251 - 364
Target Start/End: Original strand, 31623905 - 31624019
Alignment:
Q  251 taattcataatttagtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaa-ttggtcttataaatattttgtcgtttacc 349  Q
    |||| ||| |||| |||| |||||||| |||||||||||| |||||||||||||||||||| |||||||| ||||||  |||||| || |||||||||      
T  31623905 taatacatcatttggtcccttaacttatttttggttttcaatttggtcccctaactataaagtgtttcaatttggtcccataaatcttatgtcgtttatt 31624004  T
Q  350 gttttggtcctctcc 364  Q
     |||| |||||||||    
T  31624005 attttagtcctctcc 31624019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 351 - 420
Target Start/End: Complemental strand, 13363594 - 13363525
Alignment:
Q  351 ttttggtcctctccattaatttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccat 420  Q
    |||||||||||||| ||| ||||||||| ||||||||||| ||||||||| |||||||||||| ||||||    
T  13363594 ttttggtcctctccgttagtttttaacaccaaatgtctaaagtgaaccatatttaaaggtggtgcaccat 13363525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 265 - 364
Target Start/End: Complemental strand, 45385897 - 45385797
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaa-ttggtcttataaatattttgtcgtttaccgttttggtcctctc 363  Q
    |||| |||||||| |||||| ||||||||||||||| ||| |||||| |||||||| ||| || ||||||| || ||||||||||| |||| ||||||||    
T  45385897 gtcccttaacttatttttggatttcattttggtcccataattataaagtgtttcaatttgatcctataaatcttatgtcgtttaccattttagtcctctc 45385798  T
Q  364 c 364  Q
    |    
T  45385797 c 45385797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 257 - 399
Target Start/End: Complemental strand, 16363923 - 16363780
Alignment:
Q  257 ataatttagtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaa-ttggtcttataaatattttgtcgtttaccgttttg 355  Q
    ||||||| |||| |||||||| |||||||||||| |||||||| ||||||||||| | | |||| ||| ||  ||||||  | ||  ||||||  |||||    
T  16363923 ataatttggtcccttaacttatttttggttttcactttggtcctctaactataaagtatctcaatttgatcccataaatcgtctgctgtttactattttg 16363824  T
Q  356 gtcctctccattaatttttaacatcaaatgtctaaggtgaacca 399  Q
    ||||||||| ||| || ||||| | |||||||||||||||||||    
T  16363823 gtcctctccgttagttattaactttaaatgtctaaggtgaacca 16363780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 270 - 364
Target Start/End: Complemental strand, 31625482 - 31625387
Alignment:
Q  270 ttaacttacttttggttttcattttggtcccctaactataaaatgtttcaa-ttggtcttataaatattttgtcgtttaccgttttggtcctctcc 364  Q
    |||||||| |||||||||||| ||||||||||||| |||||| ||| |||| ||||||  |||||| ||||| |||||||  ||||||||||||||    
T  31625482 ttaacttatttttggttttcaatttggtcccctaattataaagtgtctcaatttggtcccataaatcttttgccgtttactattttggtcctctcc 31625387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 251 - 364
Target Start/End: Complemental strand, 38591124 - 38591010
Alignment:
Q  251 taattcataatttagtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaa-ttggtcttataaatattttgtcgtttacc 349  Q
    |||| ||| |||| |||| |||||||| ||||| |||||| |||||||||||||||||||| ||| |||| ||||||  |||||| || || |||||||     
T  38591124 taatacatcatttggtcccttaacttatttttgattttcaatttggtcccctaactataaagtgtctcaatttggtcccataaatcttatgccgtttact 38591025  T
Q  350 gttttggtcctctcc 364  Q
     ||||||||||||||    
T  38591024 attttggtcctctcc 38591010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 265 - 322
Target Start/End: Original strand, 24068343 - 24068400
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    |||| |||||||| ||||||||||||||||||||||||||||||||| ||| ||||||    
T  24068343 gtcccttaacttatttttggttttcattttggtcccctaactataaagtgtctcaatt 24068400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 265 - 322
Target Start/End: Complemental strand, 43386805 - 43386748
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    |||| |||||||| |||||||||||| |||||||||||||||||||||||| ||||||    
T  43386805 gtcccttaacttatttttggttttcagtttggtcccctaactataaaatgtctcaatt 43386748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 321 - 429
Target Start/End: Original strand, 20308675 - 20308783
Alignment:
Q  321 ttggtcttataaatattttgtcgtttaccgttttggtcctctccattaatttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccat 420  Q
    ||||||| |||| | || ||||||||||  |||||||| | |||||||||||||||| | |||||||||||||||||||  |||| || | |||| ||||    
T  20308675 ttggtctcataactcttctgtcgtttactattttggtcatttccattaatttttaaccttaaatgtctaaggtgaaccaactttatagatagtccgccat 20308774  T
Q  421 aaaccttat 429  Q
    | |||||||    
T  20308775 agaccttat 20308783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 321 - 429
Target Start/End: Original strand, 21095308 - 21095416
Alignment:
Q  321 ttggtcttataaatattttgtcgtttaccgttttggtcctctccattaatttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccat 420  Q
    ||||||| |||| | || ||||||||||  |||||||| | |||||||||||||||| | |||||||||||||||||||  |||| || | |||| ||||    
T  21095308 ttggtctcataactcttctgtcgtttactattttggtcatttccattaatttttaaccttaaatgtctaaggtgaaccaactttatagatagtccgccat 21095407  T
Q  421 aaaccttat 429  Q
    | |||||||    
T  21095408 agaccttat 21095416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 370 - 414
Target Start/End: Complemental strand, 39325831 - 39325787
Alignment:
Q  370 tttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtc 414  Q
    |||||||||||||||||||||||||||| ||||||||||||||||    
T  39325831 tttttaacatcaaatgtctaaggtgaactatgtttaaaggtggtc 39325787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 321 - 421
Target Start/End: Complemental strand, 41522734 - 41522634
Alignment:
Q  321 ttggtcttataaatattttgtcgtttaccgttttggtcctctccattaatttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccat 420  Q
    |||||| ||||| | || || ||||||| ||||| ||||| ||| | ||||||||||||||||| | |||| ||||||||||||||| |||||||| |||    
T  41522734 ttggtcctataagtcttctgccgtttactgttttagtcctttccgtcaatttttaacatcaaatatttaagatgaaccatgtttaaaagtggtccagcat 41522635  T
Q  421 a 421  Q
    |    
T  41522634 a 41522634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 268 - 374
Target Start/End: Original strand, 37274903 - 37275010
Alignment:
Q  268 ctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaa-ttggtcttataaatattttgtcgtttaccgttttggtcctctccat 366  Q
    |||||||||| |||||| |||||||||||||| ||||||||||| ||| |||| ||| ||  |||||| || || |||||||  |||||||||||||| |    
T  37274903 ctttaacttatttttggatttcattttggtcctctaactataaagtgtctcaatttgttcccataaatcttctgccgtttactattttggtcctctccgt 37275002  T
Q  367 taattttt 374  Q
    || |||||    
T  37275003 tagttttt 37275010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 292 - 429
Target Start/End: Original strand, 8095386 - 8095524
Alignment:
Q  292 tttggtcccctaactataaaatgtttcaatt-ggtcttataaatattttgtcgtttaccgttttggtcctctccattaatttttaacatcaaatgtctaa 390  Q
    ||||||||| ||||||| || ||| |||||| ||||  || | | |||||||||||||  |||||||||| ||| ||| |||||||  | ||||||||||    
T  8095386 tttggtcccttaactattaagtgtctcaatttggtcccattactcttttgtcgtttactattttggtcctttccgttagtttttaatcttaaatgtctaa 8095485  T
Q  391 ggtgaaccatgtttaaaggtggtccaccataaaccttat 429  Q
    |||||||||  |||| ||||| | ||||||| |||||||    
T  8095486 ggtgaaccaactttataggtgatgcaccatataccttat 8095524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 251 - 320
Target Start/End: Complemental strand, 10053861 - 10053792
Alignment:
Q  251 taattcataatttagtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaa 320  Q
    |||| ||| ||||||||| |||||||| |||||||||||| ||||||||| |||||||||| ||| ||||    
T  10053861 taatacatcatttagtcccttaacttatttttggttttcactttggtcccttaactataaagtgtctcaa 10053792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 563 - 616
Target Start/End: Original strand, 36938986 - 36939039
Alignment:
Q  563 tcatctccttcatcaacacattcatactctttagtcaattttcatataacccag 616  Q
    ||||||||||||||| ||||||||||||| ||| ||||| ||||||||||||||    
T  36938986 tcatctccttcatcatcacattcatactcattaatcaatcttcatataacccag 36939039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 251 - 322
Target Start/End: Original strand, 37323347 - 37323418
Alignment:
Q  251 taattcataatttagtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    |||| ||| |||| |||| |||| ||| |||||||||||| |||||| ||||||||||||||||| ||||||    
T  37323347 taatacatcatttggtcccttaatttatttttggttttcaatttggttccctaactataaaatgtctcaatt 37323418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 265 - 322
Target Start/End: Complemental strand, 19915009 - 19914952
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    ||||||||||||| ||| |||||||| ||||||||| |||||||||| ||| ||||||    
T  19915009 gtcctttaacttattttgggttttcaatttggtcccttaactataaagtgtctcaatt 19914952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 467 - 524
Target Start/End: Original strand, 38789254 - 38789311
Alignment:
Q  467 aaaaagagaaccgtttgatcatataagtatgttgtatcttacgatgaactatcaacac 524  Q
    ||||||||||||||| ||| ||||| || |||||||||||||| ||||| ||||||||    
T  38789254 aaaaagagaaccgttagattatataggtctgttgtatcttacggtgaaccatcaacac 38789311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 251 - 315
Target Start/End: Complemental strand, 7487504 - 7487440
Alignment:
Q  251 taattcataatttagtcctttaacttacttttggttttcattttggtcccctaactataaaatgt 315  Q
    |||| ||| |||| ||||||||| ||| |||| ||||||| |||| |||||||||||||||||||    
T  7487504 taatacatcatttggtcctttaatttatttttcgttttcactttgatcccctaactataaaatgt 7487440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 270 - 322
Target Start/End: Original strand, 21267182 - 21267234
Alignment:
Q  270 ttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    |||||||| |||||||||||| |||||||| ||||||||||| ||| ||||||    
T  21267182 ttaacttatttttggttttcactttggtcctctaactataaagtgtctcaatt 21267234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 251 - 315
Target Start/End: Complemental strand, 35945554 - 35945490
Alignment:
Q  251 taattcataatttagtcctttaacttacttttggttttcattttggtcccctaactataaaatgt 315  Q
    |||| ||| |||| |||| |||||||| |||| ||||||||||| ||||| ||||||||||||||    
T  35945554 taatacattatttggtcccttaacttattttttgttttcattttagtcccttaactataaaatgt 35945490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 356 - 408
Target Start/End: Original strand, 45541589 - 45541641
Alignment:
Q  356 gtcctctccattaatttttaacatcaaatgtctaaggtgaaccatgtttaaag 408  Q
    |||| ||||||||||||||||||||||| |||||| ||||| ||| |||||||    
T  45541589 gtcccctccattaatttttaacatcaaaagtctaaagtgaatcatatttaaag 45541641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 251 - 322
Target Start/End: Complemental strand, 39320 - 39249
Alignment:
Q  251 taattcataatttagtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    |||| |||| |||||||| |||||||| | || | ||||| ||||||||||||||| |||| ||||||||||    
T  39320 taatacatactttagtcccttaacttattattagatttcaatttggtcccctaactttaaactgtttcaatt 39249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 251 - 322
Target Start/End: Complemental strand, 41868033 - 41867962
Alignment:
Q  251 taattcataatttagtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    |||| ||| |||| |||| |||| ||| |||| ||||||| |||||||||||||||||||| ||| ||||||    
T  41868033 taatacatcatttggtcccttaatttatttttagttttcactttggtcccctaactataaagtgtctcaatt 41867962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 351 - 429
Target Start/End: Complemental strand, 2421309 - 2421231
Alignment:
Q  351 ttttggtcctctccattaatttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccataaaccttat 429  Q
    ||||||||||||   ||| |||||||| | |||||||||||||||||||  |||| || ||||||| |||| |||||||    
T  2421309 ttttggtcctctttgttagtttttaaccttaaatgtctaaggtgaaccaactttatagatggtccatcatagaccttat 2421231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 327 - 429
Target Start/End: Original strand, 45194559 - 45194661
Alignment:
Q  327 ttataaatattttgtcgtttaccgttttggtcctctccattaatttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccataaacct 426  Q
    |||||||| ||||| |||||||  ||||| || |||||||||||||||| | | |||||||||| || || ||   ||||| ||  ||||||||||||||    
T  45194559 ttataaatcttttgccgtttactattttgatcatctccattaatttttagccttaaatgtctaaagtaaaacaacattaaaagtaatccaccataaacct 45194658  T
Q  427 tat 429  Q
    |||    
T  45194659 tat 45194661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 265 - 322
Target Start/End: Original strand, 37998 - 38055
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    |||| |||||||| |||| ||||| ||||| |||||||||||||||| ||||| ||||    
T  37998 gtcccttaacttattttttgttttaattttagtcccctaactataaagtgtttgaatt 38055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 265 - 310
Target Start/End: Original strand, 4807379 - 4807424
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataa 310  Q
    ||||||||||||| ||||| |||| | |||||||||||||||||||    
T  4807379 gtcctttaacttatttttgatttttaatttggtcccctaactataa 4807424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 261 - 322
Target Start/End: Original strand, 7815052 - 7815113
Alignment:
Q  261 tttagtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    |||||| | |||| ||| ||||| ||||||||||||||| |||| |||||||||| ||||||    
T  7815052 tttagttccttaaattatttttgattttcattttggtcctctaattataaaatgtctcaatt 7815113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 265 - 322
Target Start/End: Original strand, 14820206 - 14820263
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    |||| |||||||| |||||| ||| | |||||||||||||||||||| ||| ||||||    
T  14820206 gtcccttaacttatttttggattttaatttggtcccctaactataaagtgtctcaatt 14820263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 270 - 358
Target Start/End: Complemental strand, 29739741 - 29739652
Alignment:
Q  270 ttaacttacttttggttttcattttggtcccctaactataaaatgtttcaa-ttggtcttataaatattttgtcgtttaccgttttggtc 358  Q
    |||| ||| |||||||||||| |||| ||||||||||||||| ||| |||| ||||||  |||||| || |  |||||||| ||||||||    
T  29739741 ttaatttatttttggttttcaatttgatcccctaactataaagtgtctcaatttggtcccataaattttcttccgtttaccattttggtc 29739652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 84; Significance: 2e-39; HSPs: 64)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 251 - 417
Target Start/End: Original strand, 38406017 - 38406184
Alignment:
Q  251 taattcataatttagtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaat-tggtcttataaatattttgtcgtttacc 349  Q
    |||| ||| |||| ||||||||| ||| ||||||||||||||||||||||||||||||||| ||| ||||  ||||   |||||| || || |||||||     
T  38406017 taatacattatttggtcctttaatttatttttggttttcattttggtcccctaactataaagtgtctcaaactggttccataaatcttctgacgtttact 38406116  T
Q  350 gttttggtcctctccattaatttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccac 417  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||||||||| ||||||||| ||||||    
T  38406117 gttttggtcctttccgttaatttttaacatcaaatgtctaaggtgaaccatatttaaaggtagtccac 38406184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 260 - 429
Target Start/End: Complemental strand, 14109177 - 14109009
Alignment:
Q  260 atttagtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaat-tggtcttataaatattttgtcgtttaccgttttggtc 358  Q
    |||| |||| |||||||| ||||  |||||| ||||||||| |||||||||||||| ||||  |||||  ||   | ||||| ||||||||||||| |||    
T  14109177 atttggtcccttaacttatttttaattttcactttggtcccttaactataaaatgtctcaaactggtcccatg--tcttttgccgtttaccgttttagtc 14109080  T
Q  359 ctctccattaatttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccataaaccttat 429  Q
    |||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  14109079 ctctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccatagaccttat 14109009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 260 - 429
Target Start/End: Complemental strand, 14419134 - 14418966
Alignment:
Q  260 atttagtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaat-tggtcttataaatattttgtcgtttaccgttttggtc 358  Q
    |||| |||| |||||||| ||||  |||||| ||||||||| |||||||||||||| ||||  |||||  ||   | ||||| ||||||||||||| |||    
T  14419134 atttggtcccttaacttatttttaattttcactttggtcccttaactataaaatgtctcaaactggtcccatg--tcttttgccgtttaccgttttagtc 14419037  T
Q  359 ctctccattaatttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccataaaccttat 429  Q
    |||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  14419036 ctctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccatagaccttat 14418966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 279 - 429
Target Start/End: Original strand, 40930445 - 40930596
Alignment:
Q  279 ttttggttttcattttggtcccctaactataaaatgtttcaatt-ggtcttataaatattttgtcgtttaccgttttggtcctctccattaatttttaac 377  Q
    |||||||||||| |||||||||||||||||||| |||||||||| ||||  |||||| |||||  |||||||||||| |||||||| |||| ||||||||    
T  40930445 ttttggttttcactttggtcccctaactataaagtgtttcaatttggtcccataaatcttttgatgtttaccgttttagtcctctctattagtttttaac 40930544  T
Q  378 atcaaatgtctaaggtgaaccatgtttaaaggtggtccaccataaaccttat 429  Q
    ||||||| ||||||||| |||||| || |||||| ||| ||||| |||||||    
T  40930545 atcaaatatctaaggtggaccatgattcaaggtgatcccccatataccttat 40930596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 260 - 447
Target Start/End: Original strand, 43930327 - 43930514
Alignment:
Q  260 atttagtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt-ggtcttataaatattttgtcgtttaccgttttggtc 358  Q
    |||| |||| |||||||| ||||| |||||| ||||||||||||||||| ||| || |||||| |||| ||||||| || ||||||||||  ||||||||    
T  43930327 atttggtcccttaacttatttttgattttcactttggtcccctaactattaaacgtctcaatttggtcctataaatcttctgtcgtttactattttggtc 43930426  T
Q  359 ctctccattaatttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccataaaccttataagttcatttaattttaa 447  Q
    |||||  |||||||||||| | |||||||||||||| || ||  ||||||||| ||||| |||  ||||| || |||||||||||||||    
T  43930427 ctctctgttaatttttaaccttaaatgtctaaggtggactat-attaaaggtgctccactataggccttacaaattcatttaattttaa 43930514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 270 - 397
Target Start/End: Original strand, 4857219 - 4857347
Alignment:
Q  270 ttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt-ggtcttataaatattttgtcgtttaccgttttggtcctctccatta 368  Q
    |||||||| |||||||||||| |||||||||||||||||||||||| || ||| ||||  | |||| || || ||||||| ||||| ||||||||| |||    
T  4857219 ttaacttatttttggttttcactttggtcccctaactataaaatgtctcgatttggtcccacaaatcttctgccgtttactgttttagtcctctccgtta 4857318  T
Q  369 atttttaacatcaaatgtctaaggtgaac 397  Q
     ||||||||||||||||||||||||||||    
T  4857319 gtttttaacatcaaatgtctaaggtgaac 4857347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 284 - 528
Target Start/End: Original strand, 26406157 - 26406400
Alignment:
Q  284 gttttcattttggtcccctaactataaaatgtttcaattgg-tcttataaatattttgtcgtttaccgttttggtcctctccattaatttttaacatcaa 382  Q
    ||||||| |||| |||| |||| ||||| ||| |||||| | ||| |||| | || || |||||| | |||||||| ||||| ||| |||||||| | ||    
T  26406157 gttttcaatttgatcccataacgataaagtgtctcaatttgatctcataactcttctgccgtttaacattttggtcatctccgttattttttaaccttaa 26406256  T
Q  383 atgtctaaggtgaaccatgtttaaaggtggtccaccataaaccttataagttcatttaattttaaccattcgatannnnnnnncaaaaagagaaccgttt 482  Q
    |||||||||||||||||  |||  ||||||||||||||| |  |||||| ||||||||||||||||| || ||||         |||||||||||||||     
T  26406257 atgtctaaggtgaaccaactttgtaggtggtccaccatagatattataaattcatttaattttaaccctttgatatttttta--aaaaagagaaccgttg 26406354  T
Q  483 gatcatataagtatgttgtatcttacgatgaactatcaacacctaa 528  Q
    ||||||||| || ||||||||| |||  ||||| ||||||||||||    
T  26406355 gatcatatatgtctgttgtatcatacagtgaacaatcaacacctaa 26406400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 251 - 374
Target Start/End: Complemental strand, 40926636 - 40926512
Alignment:
Q  251 taattcataatttagtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaa-ttggtcttataaatattttgtcgtttacc 349  Q
    |||| ||| ||||||||| |||||||| |||||||||||| |||||||||||||||||||| ||| |||| |||||| ||||||| || |  ||||||||    
T  40926636 taatacatcatttagtcccttaacttatttttggttttcactttggtcccctaactataaagtgtctcaatttggtcctataaattttctaccgtttacc 40926537  T
Q  350 gttttggtcctctccattaattttt 374  Q
    ||||||||||||||| |||| ||||    
T  40926536 gttttggtcctctccgttaactttt 40926512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 352 - 452
Target Start/End: Complemental strand, 24495066 - 24494966
Alignment:
Q  352 tttggtcctctccattaatttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccataaaccttataagttcatttaattttaaccat 451  Q
    ||||||||||||| ||| ||||||||||||||||||||| ||||||||| |||||| |||||||||||||  |||||| | ||  |||||||||||||||    
T  24495066 tttggtcctctccgttagtttttaacatcaaatgtctaaagtgaaccatatttaaaagtggtccaccatatgccttattaatttttttaattttaaccat 24494967  T
Q  452 t 452  Q
    |    
T  24494966 t 24494966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 279 - 429
Target Start/End: Complemental strand, 46458802 - 46458651
Alignment:
Q  279 ttttggttttcattttggtcccctaactataaaatgtttcaatt-ggtcttataaatattttgtcgtttaccgttttggtcctctccattaatttttaac 377  Q
    ||||| |||||| ||||||||| |||||||||| ||| |||||| ||||  |||||| || |  |||||||| |||||||||||||| ||  ||||||||    
T  46458802 ttttgattttcaatttggtcccttaactataaagtgtctcaatttggtcccataaatcttcttccgtttaccattttggtcctctccgtttgtttttaac 46458703  T
Q  378 atcaaatgtctaaggtgaaccatgtttaaaggtggtccaccataaaccttat 429  Q
     | |||||||||||||||||||  |||| |||| |||||||||| |||||||    
T  46458702 cttaaatgtctaaggtgaaccaactttataggtagtccaccatagaccttat 46458651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 339 - 421
Target Start/End: Original strand, 4167539 - 4167621
Alignment:
Q  339 tgtcgtttaccgttttggtcctctccattaatttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccata 421  Q
    |||||||||| ||||| ||| | ||  | ||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  4167539 tgtcgtttactgttttagtcatttctgtcaatttttaacatcaaatttctaaggtgaaccatgtttaaaggtggtccaccata 4167621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 265 - 360
Target Start/End: Complemental strand, 19279715 - 19279619
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaa-ttggtcttataaatattttgtcgtttaccgttttggtcct 360  Q
    |||| |||||||| |||||||||||| |||||||||||||||||||| ||| |||| ||||||  |||||| |||||||||||||  ||||||||||    
T  19279715 gtcccttaacttatttttggttttcactttggtcccctaactataaagtgtctcaatttggtcccataaattttttgtcgtttactattttggtcct 19279619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 251 - 429
Target Start/End: Complemental strand, 25155053 - 25154874
Alignment:
Q  251 taattcataatttagtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaattgg-tcttataaatattttgtcgtttacc 349  Q
    |||| ||| |||| |||| |||||||| |||||||||||| |||| |||| |||||||||| ||| ||||||   ||| |||||| || |   ||||| |    
T  25155053 taatacatcatttggtcccttaacttatttttggttttcaatttgatcccttaactataaagtgtctcaatttaatctcataaatcttcttctgtttatc 25154954  T
Q  350 gttttggtcctctccattaatttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccataaaccttat 429  Q
     |||||||| ||||| ||  |||||||| | |||||||||||||||||||  |||| | ||||||||||||||| |||||    
T  25154953 attttggtcatctccgtttgtttttaaccttaaatgtctaaggtgaaccaactttataagtggtccaccataaaacttat 25154874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 270 - 374
Target Start/End: Original strand, 14206691 - 14206796
Alignment:
Q  270 ttaacttacttttggttttcattttggtcccctaactataaaatgtttcaa-ttggtcttataaatattttgtcgtttaccgttttggtcctctccatta 368  Q
    |||| ||| |||||||||||| ||||||| ||||||||||||||||||||| |||||| ||||||| || ||||||||||  ||||| || ||||| |||    
T  14206691 ttaatttatttttggttttcactttggtcgcctaactataaaatgtttcaatttggtcctataaatcttctgtcgtttactattttgctcatctccgtta 14206790  T
Q  369 attttt 374  Q
     |||||    
T  14206791 gttttt 14206796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 270 - 374
Target Start/End: Original strand, 14215381 - 14215486
Alignment:
Q  270 ttaacttacttttggttttcattttggtcccctaactataaaatgtttcaa-ttggtcttataaatattttgtcgtttaccgttttggtcctctccatta 368  Q
    |||| ||| |||||||||||| ||||||| ||||||||||||||||||||| |||||| ||||||| || ||||||||||  ||||| || ||||| |||    
T  14215381 ttaatttatttttggttttcactttggtcgcctaactataaaatgtttcaatttggtcctataaatcttctgtcgtttactattttgctcatctccgtta 14215480  T
Q  369 attttt 374  Q
     |||||    
T  14215481 gttttt 14215486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 251 - 374
Target Start/End: Original strand, 14107831 - 14107955
Alignment:
Q  251 taattcataatttagtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttc-aattggtcttataaatattttgtcgtttacc 349  Q
    |||| ||| |||| ||| ||||||||| |||||||||||||||||||||| |||||||||| ||| || || |||||   || || || ||||||| |||    
T  14107831 taatacatcatttggtcatttaacttatttttggttttcattttggtcccttaactataaagtgtctcaaagtggtcccttatatcttctgtcgttcacc 14107930  T
Q  350 gttttggtcctctccattaattttt 374  Q
    ||||||||||||||| ||| |||||    
T  14107931 gttttggtcctctccgttagttttt 14107955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 251 - 374
Target Start/End: Original strand, 14417788 - 14417912
Alignment:
Q  251 taattcataatttagtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttc-aattggtcttataaatattttgtcgtttacc 349  Q
    |||| ||| |||| ||| ||||||||| |||||||||||||||||||||| |||||||||| ||| || || |||||   || || || ||||||| |||    
T  14417788 taatacatcatttggtcatttaacttatttttggttttcattttggtcccttaactataaagtgtctcaaagtggtcccttatatcttctgtcgttcacc 14417887  T
Q  350 gttttggtcctctccattaattttt 374  Q
    ||||||||||||||| ||| |||||    
T  14417888 gttttggtcctctccgttagttttt 14417912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 265 - 420
Target Start/End: Complemental strand, 19848937 - 19848781
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt-ggtcttataaatattttgtcgtttaccgttttggtcctctc 363  Q
    |||| |||||||| |||||| ||||||||||||||| |||||||||| ||| |||||| ||||  ||||||||     ||||||||    || |||| ||    
T  19848937 gtcccttaacttatttttggatttcattttggtcccttaactataaagtgtctcaatttggtcccataaatatacctccgtttacccaggtgatcctttc 19848838  T
Q  364 cattaatttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccat 420  Q
      ||||||||||||| ||||| ||||||||||||||| ||| |||||| ||||||||    
T  19848837 tgttaatttttaacagcaaatctctaaggtgaaccatatttcaaggtgatccaccat 19848781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 251 - 370
Target Start/End: Original strand, 22744745 - 22744865
Alignment:
Q  251 taattcataatttagtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaa-ttggtcttataaatattttgtcgtttacc 349  Q
    |||| ||| |||| |||| |||||||| ||||| |||||| ||| |||||||||||||||| |||||||| |||||| ||||||| || || |||||||     
T  22744745 taatacatcatttggtcccttaacttatttttgattttcaatttagtcccctaactataaagtgtttcaatttggtcctataaatcttatgccgtttact 22744844  T
Q  350 gttttggtcctctccattaat 370  Q
     |||||||| ||||| |||||    
T  22744845 attttggtcttctccgttaat 22744865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 265 - 450
Target Start/End: Original strand, 45719628 - 45719814
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaa-ttggtcttataaatattttgtcgtttaccgttttggtcctctc 363  Q
    ||||||||| ||| ||||| |||||| |||| ||||||||||||||| ||| | || ||||||| |||| | || ||| ||||||| |||||||  | |     
T  45719628 gtcctttaatttatttttgattttcagtttgatcccctaactataaagtgtctaaatttggtctcataactcttctgttgtttaccattttggttttttt 45719727  T
Q  364 cattaatttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccataaacctta-taagttcatttaattttaacca 450  Q
    | | | |||||||||  |||||||||||||| ||||   ||| ||||| |||||||||||||||| ||||||  ||||||||||||||    
T  45719728 cgtcagtttttaacactaaatgtctaaggtggaccaacattataggtgctccaccataaaccttactaagtt-ttttaattttaacca 45719814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 271 - 368
Target Start/End: Original strand, 7146799 - 7146896
Alignment:
Q  271 taacttacttttggttttcattttggtcccctaactataaaatgtttcaa-ttggtcttataaatattttgtcgtttaccgttttggtcctctccatta 368  Q
    ||||||| |||  ||||||| |||||||||||||||||||| |||||||| |||||| | ||||| || |||| ||||| |||||||||||||||||||    
T  7146799 taacttattttctgttttcaatttggtcccctaactataaagtgtttcaatttggtcct-taaatcttatgtcatttactgttttggtcctctccatta 7146896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 265 - 420
Target Start/End: Original strand, 18801228 - 18801384
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt-ggtcttataaatattttgtcgtttaccgttttggtcctctc 363  Q
    |||| |||||||| |||||  |||||||||||||||||||||||||| ||| |||||| ||||  ||||||||      |||||||    || |||| ||    
T  18801228 gtcccttaacttatttttgaatttcattttggtcccctaactataaagtgtctcaatttggtcccataaatatacctctgtttaccaaaatgatcctttc 18801327  T
Q  364 cattaatttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccat 420  Q
      ||||||||||||| ||||| ||||||||||||||| ||| |||||| ||||||||    
T  18801328 tgttaatttttaacagcaaatctctaaggtgaaccatatttcaaggtgatccaccat 18801384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 251 - 322
Target Start/End: Original strand, 33458309 - 33458380
Alignment:
Q  251 taattcataatttagtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    |||| ||| |||| ||||||||||||| |||||||||||||||||||||  |||||||||| ||| ||||||    
T  33458309 taatacatcatttggtcctttaacttatttttggttttcattttggtcctttaactataaagtgtctcaatt 33458380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 251 - 322
Target Start/End: Complemental strand, 33459660 - 33459589
Alignment:
Q  251 taattcataatttagtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    |||| ||| |||||||||  ||||||| ||||||||||||||||||||| ||||||||||| ||| ||||||    
T  33459660 taatacatcatttagtcccataacttatttttggttttcattttggtcctctaactataaagtgtctcaatt 33459589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 251 - 364
Target Start/End: Complemental strand, 22746437 - 22746323
Alignment:
Q  251 taattcataatttagtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaa-ttggtcttataaatattttgtcgtttacc 349  Q
    |||| ||| |||| ||||||||||||| |||| ||||||| ||| |||||||||||||||| ||| |||| ||||||  |||||| || || |||||||     
T  22746437 taatacattatttggtcctttaacttattttttgttttcaatttagtcccctaactataaagtgtctcaatttggtcccataaatcttgtgccgtttact 22746338  T
Q  350 gttttggtcctctcc 364  Q
     ||||| ||||||||    
T  22746337 attttgatcctctcc 22746323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 265 - 374
Target Start/End: Original strand, 43935198 - 43935308
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaa-ttggtcttataaatattttgtcgtttaccgttttggtcctctc 363  Q
    |||| |||||||| |||||| |||||||||||||| ||||||||||| ||| |||| ||||||| |||||| || || |||||||  ||||  ||||| |    
T  43935198 gtcccttaacttatttttggatttcattttggtcctctaactataaagtgtctcaatttggtctcataaatcttctgccgtttactattttcatcctccc 43935297  T
Q  364 cattaattttt 374  Q
    ||||| |||||    
T  43935298 cattagttttt 43935308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 265 - 374
Target Start/End: Complemental strand, 43936243 - 43936133
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaaatgt-ttcaattggtcttataaatattttgtcgtttaccgttttggtcctctc 363  Q
    |||| |||||||| |||||| |||||||||||||| ||||||||||| | | || | ||||||| |||| | || ||||||||||  |||||||||||||    
T  43936243 gtcccttaacttatttttggatttcattttggtcctctaactataaagtttcttaatttggtctcataattcttctgtcgtttactattttggtcctctc 43936144  T
Q  364 cattaattttt 374  Q
    | ||| |||||    
T  43936143 cgttagttttt 43936133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 251 - 374
Target Start/End: Complemental strand, 4858461 - 4858337
Alignment:
Q  251 taattcataatttagtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaa-ttggtcttataaatattttgtcgtttacc 349  Q
    |||| ||| |||| |||| |||||||| |||| ||||||| |||| ||||||||||||||||||| |||| ||||||  |||||| || ||| ||||||     
T  4858461 taatacatcatttggtcccttaacttatttttagttttcactttgatcccctaactataaaatgtctcaatttggtcccataaatcttctgttgtttact 4858362  T
Q  350 gttttggtcctctccattaattttt 374  Q
     ||||  ||||||| |||| |||||    
T  4858361 attttaatcctctctattagttttt 4858337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 251 - 358
Target Start/End: Original strand, 25153657 - 25153765
Alignment:
Q  251 taattcataatttagtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaa-ttggtcttataaatattttgtcgtttacc 349  Q
    |||| ||| |||| |||| |||||||| ||| | |||||| |||||||||||||||||||| ||| |||| ||||||  |||||| || |  ||||||||    
T  25153657 taatacatcatttggtcccttaacttattttcgattttcaatttggtcccctaactataaagtgtctcaatttggtcccataaatcttcttccgtttacc 25153756  T
Q  350 gttttggtc 358  Q
    |||||||||    
T  25153757 gttttggtc 25153765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 563 - 615
Target Start/End: Complemental strand, 25533160 - 25533108
Alignment:
Q  563 tcatctccttcatcaacacattcatactctttagtcaattttcatataaccca 615  Q
    ||||||||||||||| ||||||||||||  ||||||||| |||||||||||||    
T  25533160 tcatctccttcatcatcacattcatacttcttagtcaatcttcatataaccca 25533108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 270 - 322
Target Start/End: Complemental strand, 45721864 - 45721812
Alignment:
Q  270 ttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    |||||||| |||| |||||||||||||||||||||||||||| ||| ||||||    
T  45721864 ttaacttatttttagttttcattttggtcccctaactataaagtgtctcaatt 45721812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 251 - 322
Target Start/End: Complemental strand, 18802506 - 18802435
Alignment:
Q  251 taattcataatttagtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    |||| ||| |||| |||| |||||||| |||| |||||||||||| ||||||||||||||| ||| ||||||    
T  18802506 taatacatcatttggtcccttaacttattttttgttttcattttgatcccctaactataaagtgtctcaatt 18802435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 251 - 322
Target Start/End: Original strand, 43006384 - 43006455
Alignment:
Q  251 taattcataatttagtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    |||| ||| |||| |||| |||||||| |||||||||||| ||||||||||||||||| || ||| ||||||    
T  43006384 taatacatcatttggtcccttaacttatttttggttttcaatttggtcccctaactattaagtgtctcaatt 43006455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 274 - 368
Target Start/End: Original strand, 46673512 - 46673606
Alignment:
Q  274 cttacttttggttttcattttggtcccctaactataaaatgtttcaa-ttggtcttataaatattttgtcgtttaccgttttggtcctctccatta 368  Q
    |||| |||||||||||| |||||||||||||| ||||| |||||||| ||||||  |||||| || || |||||||  | ||||||||||||||||    
T  46673512 cttatttttggttttcaatttggtcccctaacaataaagtgtttcaatttggtcccataaatcttatg-cgtttactatgttggtcctctccatta 46673606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 270 - 364
Target Start/End: Complemental strand, 46675032 - 46674937
Alignment:
Q  270 ttaacttacttttggttttcattttggtcccctaactataaaatgtttc-aattggtcttataaatattttgtcgtttaccgttttggtcctctcc 364  Q
    |||||||| |||||||||||| |||| |||| |||||||||| ||| || | ||||||  |||||| ||||| |||||||  ||||||||||||||    
T  46675032 ttaacttatttttggttttcaatttgatcccttaactataaagtgtctcgatttggtcccataaatcttttgccgtttactattttggtcctctcc 46674937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 271 - 364
Target Start/End: Original strand, 48754015 - 48754109
Alignment:
Q  271 taacttacttttggttttcattttggtcccctaactataaaatgtttcaa-ttggtcttataaatattttgtcgtttaccgttttggtcctctcc 364  Q
    ||||||| |||| | ||| ||||||||||| ||| |||||| |||||||| || ||| ||||||| || ||||||||||| |||| |||||||||    
T  48754015 taacttatttttagattttattttggtcccataattataaagtgtttcaatttagtcctataaatcttatgtcgtttaccattttagtcctctcc 48754109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 265 - 322
Target Start/End: Complemental strand, 17288323 - 17288266
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    |||| |||||||| |||| ||||| |||||||||||||||||||||| ||| ||||||    
T  17288323 gtcccttaacttattttttgttttaattttggtcccctaactataaagtgtctcaatt 17288266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 265 - 322
Target Start/End: Complemental strand, 30224079 - 30224022
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    |||| |||||||| ||| || |||||||||||||||||||||||||| ||| ||||||    
T  30224079 gtcccttaacttattttcggatttcattttggtcccctaactataaattgtctcaatt 30224022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 265 - 322
Target Start/End: Complemental strand, 36673939 - 36673882
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    |||| |||||||| ||| || ||| |||||||||||||||||||||||||| ||||||    
T  36673939 gtcccttaacttattttcggattttattttggtcccctaactataaaatgtctcaatt 36673882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 265 - 322
Target Start/End: Original strand, 41616637 - 41616694
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    |||| |||||||| ||| || |||||||||||||||||||||||||| ||| ||||||    
T  41616637 gtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatt 41616694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 286 - 322
Target Start/End: Complemental strand, 2904129 - 2904093
Alignment:
Q  286 tttcattttggtcccctaactataaaatgtttcaatt 322  Q
    |||||||||||||||||||||||||||||| ||||||    
T  2904129 tttcattttggtcccctaactataaaatgtctcaatt 2904093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 265 - 364
Target Start/End: Complemental strand, 7148161 - 7148061
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaa-ttggtcttataaatattttgtcgtttaccgttttggtcctctc 363  Q
    |||| |||||||| |||  ||||||| |||||||  ||||||||||| |||||||| ||||||   ||||| || |||||||||| |||||||| |||||    
T  7148161 gtcccttaacttattttctgttttcaatttggtcatctaactataaagtgtttcaatttggtcccttaaatcttatgtcgtttactgttttggttctctc 7148062  T
Q  364 c 364  Q
    |    
T  7148061 c 7148061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 251 - 362
Target Start/End: Original strand, 19278352 - 19278464
Alignment:
Q  251 taattcataatttagtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaa-ttggtcttataaatattttgtcgtttacc 349  Q
    |||| ||| |||| |||| |||||||| |||||| ||||||||||||||| ||| |||||| ||| |||| ||||||  |||| | || || |||||||     
T  19278352 taatacatcatttggtcccttaacttatttttggatttcattttggtcccttaattataaagtgtctcaatttggtcccataattcttctgccgtttact 19278451  T
Q  350 gttttggtcctct 362  Q
     ||||||||||||    
T  19278452 attttggtcctct 19278464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 292 - 399
Target Start/End: Complemental strand, 27899290 - 27899182
Alignment:
Q  292 tttggtcccctaactataaaatgtttcaattgg-tcttataaatattttgtcgtttaccgttttggtcctctccattaatttttaacatcaaatgtctaa 390  Q
    ||||||||  |||||||||||| | |||||| | ||  |||||| |||||||||||||  |||||||| | ||| ||| |||||||| | |||| |||||    
T  27899290 tttggtcctttaactataaaatatctcaatttgatcccataaatcttttgtcgtttactattttggtcttatccgttagtttttaaccttaaatatctaa 27899191  T
Q  391 ggtgaacca 399  Q
    |||||||||    
T  27899190 ggtgaacca 27899182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 251 - 322
Target Start/End: Complemental strand, 22061912 - 22061841
Alignment:
Q  251 taattcataatttagtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    |||| ||| |||| |||| |||||||| |||  ||||||| ||||||||||||||||||||| || ||||||    
T  22061912 taatacatcattttgtcccttaacttattttgtgttttcaatttggtcccctaactataaaacgtctcaatt 22061841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 339 - 390
Target Start/End: Complemental strand, 35315250 - 35315199
Alignment:
Q  339 tgtcgtttaccgttttggtcctctccattaatttttaacatcaaatgtctaa 390  Q
    |||||||||| ||||| ||||||||  ||| |||||||||||||||||||||    
T  35315250 tgtcgtttactgttttagtcctctctgttagtttttaacatcaaatgtctaa 35315199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 367 - 429
Target Start/End: Original strand, 10256239 - 10256301
Alignment:
Q  367 taatttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccataaaccttat 429  Q
    ||||||||||| | ||| |||||||||||||||  |||| |||| |||||||||| |||||||    
T  10256239 taatttttaaccttaaaagtctaaggtgaaccaactttataggtagtccaccatagaccttat 10256301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 285 - 426
Target Start/End: Original strand, 24872024 - 24872165
Alignment:
Q  285 ttttcattttggtcccctaactataaaatgtttcaatt-ggtcttataaatattttgtcgtttaccgttttggtcctctccattaatttttaacatcaaa 383  Q
    ||||||||||||||| ||||||||||| | | || ||| ||||| |||| | ||||  |||||||| ||||| |||| ||| ||  |||||||| | |||    
T  24872024 ttttcattttggtccactaactataaa-tatctctatttggtctcataagtctttttccgtttaccattttgatcctttccgtttgtttttaaccttaaa 24872122  T
Q  384 tgtctaaggtgaaccatgtttaaaggtggtccaccataaacct 426  Q
    |||||| |||||| ||  |||| || || ||||||||||||||    
T  24872123 tgtctatggtgaatcaactttatagatgatccaccataaacct 24872165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 265 - 311
Target Start/End: Original strand, 30222659 - 30222705
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaa 311  Q
    ||||||||| ||| |||||| ||||||||||||||||||| ||||||    
T  30222659 gtcctttaatttatttttggatttcattttggtcccctaattataaa 30222705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 265 - 311
Target Start/End: Complemental strand, 34558404 - 34558358
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaa 311  Q
    |||| |||||||| ||| || ||||||||||||||||||||||||||    
T  34558404 gtcccttaacttattttcggatttcattttggtcccctaactataaa 34558358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 265 - 311
Target Start/End: Complemental strand, 41618602 - 41618556
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaa 311  Q
    |||| |||||||| |||||| ||||||||||||||||||| ||||||    
T  41618602 gtcccttaacttatttttggatttcattttggtcccctaattataaa 41618556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 260 - 322
Target Start/End: Complemental strand, 43007757 - 43007695
Alignment:
Q  260 atttagtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    |||| |||||| |||||| ||||| |||||| |||||||| ||||||||||| ||| ||||||    
T  43007757 atttggtccttcaacttatttttgattttcaatttggtcctctaactataaagtgtctcaatt 43007695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 251 - 313
Target Start/End: Complemental strand, 44114772 - 44114711
Alignment:
Q  251 taattcataatttagtcctttaacttacttttggttttcattttggtcccctaactataaaat 313  Q
    |||| ||| |||| |||| |||||||| |||| ||||||||||||||||||| ||||||||||    
T  44114772 taatacatcatttggtcccttaacttatttttagttttcattttggtcccct-actataaaat 44114711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 261 - 322
Target Start/End: Original strand, 17287083 - 17287144
Alignment:
Q  261 tttagtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    |||||||| |||||||| | || | ||||| ||||||||||||||| |||| ||||||||||    
T  17287083 tttagtcccttaacttattattagatttcaatttggtcccctaactttaaactgtttcaatt 17287144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 265 - 322
Target Start/End: Complemental strand, 21171589 - 21171532
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    |||| |||||||| |||||| ||||| ||||||||||||||| |||| ||| ||||||    
T  21171589 gtcccttaacttatttttggatttcaatttggtcccctaactttaaattgtctcaatt 21171532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 270 - 358
Target Start/End: Complemental strand, 24873695 - 24873606
Alignment:
Q  270 ttaacttacttttggttttcattttggtcccctaactataaaatgtttcaa-ttggtcttataaatattttgtcgtttaccgttttggtc 358  Q
    |||||||| |||| |||||||||||| | ||||||||||||| ||| |||| ||||||  |||| | || || |||||||| ||||||||    
T  24873695 ttaacttattttttgttttcattttgatgccctaactataaagtgtctcaatttggtcccataagtcttctgccgtttaccattttggtc 24873606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 270 - 311
Target Start/End: Original strand, 28325090 - 28325131
Alignment:
Q  270 ttaacttacttttggttttcattttggtcccctaactataaa 311  Q
    |||||||| |||||||||| ||||||||||||||||| ||||    
T  28325090 ttaacttatttttggttttaattttggtcccctaactttaaa 28325131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 265 - 322
Target Start/End: Original strand, 38001517 - 38001574
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    |||| |||||||| ||| |  |||||||||||||| ||||||||||| ||||||||||    
T  38001517 gtcccttaacttattttcgaatttcattttggtcctctaactataaagtgtttcaatt 38001574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 265 - 322
Target Start/End: Original strand, 41126252 - 41126309
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    |||| |||||||| |||  | |||||||||||||||||||||||||| ||| ||||||    
T  41126252 gtcccttaacttattttcagatttcattttggtcccctaactataaagtgtctcaatt 41126309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 270 - 311
Target Start/End: Complemental strand, 41127269 - 41127228
Alignment:
Q  270 ttaacttacttttggttttcattttggtcccctaactataaa 311  Q
    |||||||| ||| || ||||||||||||||||||||||||||    
T  41127269 ttaacttattttcggatttcattttggtcccctaactataaa 41127228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 270 - 311
Target Start/End: Complemental strand, 41516442 - 41516401
Alignment:
Q  270 ttaacttacttttggttttcattttggtcccctaactataaa 311  Q
    |||||||| |||| ||||| ||||||||||||||||||||||    
T  41516442 ttaacttattttttgttttaattttggtcccctaactataaa 41516401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 467 - 528
Target Start/End: Original strand, 43930533 - 43930594
Alignment:
Q  467 aaaaagagaaccgtttgatcatataagtatgttgtatcttacgatgaactatcaacacctaa 528  Q
    ||||||||||||||| ||| ||||| || ||||||| |||| ||||||| || |||||||||    
T  43930533 aaaaagagaaccgttggattatataggtctgttgtaccttatgatgaaccattaacacctaa 43930594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 265 - 322
Target Start/End: Original strand, 45089485 - 45089541
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    |||| |||||||| ||||||||||||||||||||| || |||||||| ||| ||||||    
T  45089485 gtcccttaacttatttttggttttcattttggtcctct-actataaagtgtctcaatt 45089541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 265 - 322
Target Start/End: Complemental strand, 48755651 - 48755594
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    |||| |||||||| |||||  ||||||||||||||  |||||||||||||| ||||||    
T  48755651 gtcccttaacttatttttgaatttcattttggtcctataactataaaatgtctcaatt 48755594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 76; Significance: 9e-35; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 251 - 429
Target Start/End: Complemental strand, 33802134 - 33801955
Alignment:
Q  251 taattcataatttagtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaattgg-tcttataaatattttgtcgtttacc 349  Q
    |||| ||| |||| |||| |||||||| |||||||||||| |||||||||||||||||||| ||| | |||| | ||  |||||| || ||| |||||||    
T  33802134 taatacatcatttggtcccttaacttatttttggttttcactttggtcccctaactataaagtgtcttaatttgatcccataaatcttctgtagtttacc 33802035  T
Q  350 gttttggtcctctccattaatttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccataaaccttat 429  Q
    || |||||||||||| ||| ||||||||||||||| ||||||||  |||||| || |||||||||||||||| |||||||    
T  33802034 gtattggtcctctccgttagtttttaacatcaaatatctaaggtagaccatgattcaaggtggtccaccatataccttat 33801955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 279 - 429
Target Start/End: Complemental strand, 293729 - 293578
Alignment:
Q  279 ttttggttttcattttggtcccctaactataaaatgtttcaatt-ggtcttataaatattttgtcgtttaccgttttggtcctctccattaatttttaac 377  Q
    |||| ||||||| |||| || ||||| |||||| |||||||||| ||||| |||| | || ||||||||||| |||||||||||||| || |||||||||    
T  293729 tttttgttttcaatttgatctcctaattataaagtgtttcaatttggtctcataagtcttctgtcgtttaccattttggtcctctccgtttatttttaac 293630  T
Q  378 atcaaatgtctaaggtgaaccatgtttaaaggtggtccaccataaaccttat 429  Q
     | |||||||||||||||||||  |||| ||||||||||||||| |||||||    
T  293629 cttaaatgtctaaggtgaaccaactttataggtggtccaccatagaccttat 293578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 251 - 421
Target Start/End: Complemental strand, 18139604 - 18139433
Alignment:
Q  251 taattcataatttagtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaa-ttggtcttataaatattttgtcgtttacc 349  Q
    |||| ||| |||| |||| |||||||| |||  ||||||| |||| ||| ||||||||||| ||| |||| ||||||   || || || || ||||||      
T  18139604 taatacatcatttggtcccttaacttattttccgttttcactttgatcctctaactataaagtgtctcaaattggtcccttatatcttctgccgtttatt 18139505  T
Q  350 gttttggtcctctccattaatttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccata 421  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||||||||    
T  18139504 gttttggtcctctccattagtttttaacatcaaatgtctaaggtgaaccatgtttaaagatgatccaccata 18139433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 265 - 421
Target Start/End: Original strand, 31738376 - 31738533
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaa-ttggtcttataaatattttgtcgtttaccgttttggtcctctc 363  Q
    |||| |||||||| |||||||||||| |||||||||||||||||||| |||||||| ||||||  |||| | || ||  ||||||| |||||||||||||    
T  31738376 gtcccttaacttatttttggttttcaatttggtcccctaactataaagtgtttcaatttggtcccataagtcttctgcggtttaccattttggtcctctc 31738475  T
Q  364 cattaatttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccata 421  Q
    | ||| |||||||| | |||||||||| ||||||||  |||| ||  |||||||||||    
T  31738476 cgttagtttttaaccttaaatgtctaatgtgaaccaactttatagacggtccaccata 31738533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 321 - 429
Target Start/End: Complemental strand, 14328820 - 14328712
Alignment:
Q  321 ttggtcttataaatattttgtcgtttaccgttttggtcctctccattaatttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccat 420  Q
    ||||||| |||| | |||||||||||||  |||||||||||||| ||| |||||||| | |||||||||||||||||||  |||| ||||||||||||||    
T  14328820 ttggtctcataattcttttgtcgtttactattttggtcctctccgttactttttaaccttaaatgtctaaggtgaaccaactttataggtggtccaccat 14328721  T
Q  421 aaaccttat 429  Q
    | |||||||    
T  14328720 agaccttat 14328712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 321 - 429
Target Start/End: Complemental strand, 14421830 - 14421722
Alignment:
Q  321 ttggtcttataaatattttgtcgtttaccgttttggtcctctccattaatttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccat 420  Q
    ||||||| |||| | |||||||||||||  |||||||||||||| ||| |||||||| | |||||||||||||||||||  |||| ||||||||||||||    
T  14421830 ttggtctcataattcttttgtcgtttactattttggtcctctccgttactttttaaccttaaatgtctaaggtgaaccaactttataggtggtccaccat 14421731  T
Q  421 aaaccttat 429  Q
    | |||||||    
T  14421730 agaccttat 14421722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 251 - 370
Target Start/End: Original strand, 8411085 - 8411205
Alignment:
Q  251 taattcataatttagtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaa-ttggtcttataaatattttgtcgtttacc 349  Q
    |||| ||| ||||||| | |||||||| |||||||||||| ||| |||||||||||||||| ||| |||| |||||||||||||| || || |||||||     
T  8411085 taatacatcatttagttccttaacttatttttggttttcaatttagtcccctaactataaagtgtctcaatttggtcttataaatcttatgccgtttact 8411184  T
Q  350 gttttggtcctctccattaat 370  Q
     |||||||||||||| |||||    
T  8411185 attttggtcctctccgttaat 8411205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 251 - 429
Target Start/End: Complemental strand, 27440292 - 27440113
Alignment:
Q  251 taattcataatttagtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt-ggtcttataaatattttgtcgtttacc 349  Q
    |||| ||| |||| |||| |||||||| |||||  |||||||||| |||| ||||| |||| ||| |||||| ||||  |||||| || |  |||||||     
T  27440292 taatacatcatttggtcccttaacttatttttgaatttcattttgatcccttaactttaaattgtctcaatttggtcccataaatcttcttccgtttact 27440193  T
Q  350 gttttggtcctctccattaatttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccataaaccttat 429  Q
     |||||||||||||| |||||||||||| | ||||||||||||||||  |  |||  |||||||| ||||||||| ||||    
T  27440192 attttggtcctctccgttaatttttaactttaaatgtctaaggtgaattaactttgtaggtggtctaccataaactttat 27440113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 251 - 360
Target Start/End: Original strand, 5311278 - 5311388
Alignment:
Q  251 taattcataatttagtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaa-ttggtcttataaatattttgtcgtttacc 349  Q
    |||| ||| |||| |||| |||||||| |||||||||||| ||| |||||||||||||||| ||| |||| |||||| ||||||| || ||||||||||     
T  5311278 taatacatcatttggtcccttaacttatttttggttttcaatttagtcccctaactataaagtgtctcaatttggtcctataaatcttatgtcgtttact 5311377  T
Q  350 gttttggtcct 360  Q
     ||||||||||    
T  5311378 attttggtcct 5311388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 270 - 374
Target Start/End: Original strand, 33807707 - 33807812
Alignment:
Q  270 ttaacttacttttggttttcattttggtcccctaactataaaatgtttcaattgg-tcttataaatattttgtcgtttaccgttttggtcctctccatta 368  Q
    |||||||| |||||||||||| ||||||||| |||||||||| ||| |||||| | |   |||||| || || ||||||||||||||||||||||| |||    
T  33807707 ttaacttatttttggttttcactttggtcccttaactataaagtgtctcaatttgatgccataaattttctgccgtttaccgttttggtcctctccgtta 33807806  T
Q  369 attttt 374  Q
    ||||||    
T  33807807 attttt 33807812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 270 - 374
Target Start/End: Complemental strand, 22300001 - 22299896
Alignment:
Q  270 ttaacttacttttggttttcattttggtcccctaactataaaatgtttcaa-ttggtcttataaatattttgtcgtttaccgttttggtcctctccatta 368  Q
    |||||||| |||||||||||| |||||||||||||||||||| ||| |||| ||||||  |||||| || || |||||||  |||||||| ||||| |||    
T  22300001 ttaacttatttttggttttcactttggtcccctaactataaagtgtctcaatttggtcccataaatcttctgccgtttactattttggtcatctccgtta 22299902  T
Q  369 attttt 374  Q
     |||||    
T  22299901 tttttt 22299896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 251 - 374
Target Start/End: Original strand, 27438789 - 27438913
Alignment:
Q  251 taattcataatttagtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaa-ttggtcttataaatattttgtcgtttacc 349  Q
    |||| ||| |||| |||| |||||||| |||||| ||||||||||||||  |||||||||| ||| |||| ||| ||  ||||||||| || |||||||     
T  27438789 taatacatcatttggtcccttaacttatttttggatttcattttggtcctttaactataaagtgtctcaatttgatcccataaatattctgccgtttact 27438888  T
Q  350 gttttggtcctctccattaattttt 374  Q
     |||||||| ||||| |||||||||    
T  27438889 cttttggtcatctccgttaattttt 27438913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 265 - 360
Target Start/End: Complemental strand, 31740375 - 31740279
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaa-ttggtcttataaatattttgtcgtttaccgttttggtcct 360  Q
    ||||||||||||| |||| ||||||| ||||||||| |||||||||| ||| |||| ||||||  |||||| || || |||||||| ||||||||||    
T  31740375 gtcctttaacttattttttgttttcaatttggtcccttaactataaagtgtctcaatttggtcccataaatcttatgccgtttaccattttggtcct 31740279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 265 - 399
Target Start/End: Original strand, 9927619 - 9927753
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt-ggtcttataaatattttgtcgtttaccgttttggtcctctc 363  Q
    |||| |||||||| |||| ||||| | |||||||||||||||||||| ||| |||||| ||||  |||||  ||   ||||||||  |||||||| ||||    
T  9927619 gtcccttaacttattttttgtttttagtttggtcccctaactataaagtgtctcaatttggtcccataaac-ttcaatcgtttactattttggtcatctc 9927717  T
Q  364 cattaatttttaacatcaaatgtctaaggtgaacca 399  Q
    | |||||||||||| | ||||||||||| |||||||    
T  9927718 cgttaatttttaaccttaaatgtctaagatgaacca 9927753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 370 - 417
Target Start/End: Complemental strand, 13507168 - 13507121
Alignment:
Q  370 tttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccac 417  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||||||    
T  13507168 tttttaacatcaaatgtttaaggtgaaccatatttaaaggtggtccac 13507121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 251 - 364
Target Start/End: Complemental strand, 8412433 - 8412319
Alignment:
Q  251 taattcataatttagtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaa-ttggtcttataaatattttgtcgtttacc 349  Q
    |||| ||| |||| |||| |||||||| |||| ||||||| ||| |||||||||||||||| ||| |||| ||||||  |||||| || || |||||||     
T  8412433 taatacattatttggtcccttaacttattttttgttttcaatttagtcccctaactataaagtgtctcaatttggtcccataaatcttgtgccgtttact 8412334  T
Q  350 gttttggtcctctcc 364  Q
     ||||||||||||||    
T  8412333 attttggtcctctcc 8412319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 261 - 322
Target Start/End: Original strand, 8447230 - 8447291
Alignment:
Q  261 tttagtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    |||||||| |||||||| ||| || |||||||||||||||||||||||||| ||| ||||||    
T  8447230 tttagtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatt 8447291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 261 - 322
Target Start/End: Original strand, 8456034 - 8456095
Alignment:
Q  261 tttagtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    |||||||| |||||||| ||| || |||||||||||||||||||||||||| ||| ||||||    
T  8456034 tttagtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatt 8456095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 265 - 429
Target Start/End: Original strand, 22298617 - 22298782
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttca-attggtcttataaatattttgtcgtttaccgttttggtcctctc 363  Q
    ||||||||||||| ||||||||||||||||||||| |||| | |||| ||| |||  ||| ||  |||| |||| || ||||||   ||||||||   ||    
T  22298617 gtcctttaacttatttttggttttcattttggtcctctaattttaaagtgtctcagtttgatcccataactattctgccgtttataattttggtctcttc 22298716  T
Q  364 cattaatttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccataaaccttat 429  Q
    | ||| |||||||| | |||||||||||||| || |  |||| |||||||| ||||||||| ||||    
T  22298717 cgttagtttttaaccttaaatgtctaaggtggacgaactttacaggtggtctaccataaactttat 22298782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 270 - 322
Target Start/End: Original strand, 18773672 - 18773724
Alignment:
Q  270 ttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    |||||||| |||||| ||||||||||||||||||| |||||||||| ||||||    
T  18773672 ttaacttatttttggatttcattttggtcccctaattataaaatgtctcaatt 18773724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 270 - 322
Target Start/End: Complemental strand, 28226516 - 28226464
Alignment:
Q  270 ttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    |||||||| ||| || |||||||||||||||||||||||||| ||| ||||||    
T  28226516 ttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatt 28226464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 351 - 421
Target Start/End: Original strand, 2130883 - 2130953
Alignment:
Q  351 ttttggtcctctccattaatttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccata 421  Q
    |||||||||||||| ||| | |||||| | |||| ||||||||||||||  |||| ||||||| |||||||    
T  2130883 ttttggtcctctcccttagtatttaaccttaaatatctaaggtgaaccacctttataggtggttcaccata 2130953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 260 - 328
Target Start/End: Complemental strand, 683648 - 683579
Alignment:
Q  260 atttagtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttc-aattggtctt 328  Q
    |||| ||||||||||||| |||  ||||||| |||||||||||| |||| ||| ||||| ||||||||||    
T  683648 atttggtcctttaacttattttctgttttcaatttggtcccctacctattaaacgtttcaaattggtctt 683579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 265 - 322
Target Start/End: Complemental strand, 2138740 - 2138683
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    |||| |||| ||| |||||| ||| |||||||||||||||||||||| ||| ||||||    
T  2138740 gtcccttaatttatttttggattttattttggtcccctaactataaagtgtctcaatt 2138683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 265 - 318
Target Start/End: Complemental strand, 7829473 - 7829420
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttc 318  Q
    |||| ||||||||||||| | ||||||||||||||| ||||||| ||| |||||    
T  7829473 gtcccttaacttactttttggtttcattttggtcccttaactattaaaagtttc 7829420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 265 - 322
Target Start/End: Original strand, 13173050 - 13173107
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    |||| |||||||| ||| || ||| |||||||||||||||||||||| ||| ||||||    
T  13173050 gtcccttaacttattttcggattttattttggtcccctaactataaagtgtctcaatt 13173107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 265 - 322
Target Start/End: Original strand, 19367730 - 19367787
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    |||| |||||||| ||| |  |||||||||||||||||||||||||| ||| ||||||    
T  19367730 gtcccttaacttattttcgaatttcattttggtcccctaactataaagtgtctcaatt 19367787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 265 - 322
Target Start/End: Complemental strand, 19368621 - 19368564
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    |||| |||||||| ||| || |||||||||||||| ||||||||||| ||| ||||||    
T  19368621 gtcccttaacttattttcggatttcattttggtcctctaactataaagtgtctcaatt 19368564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 265 - 322
Target Start/End: Complemental strand, 26584140 - 26584083
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    |||| |||||||| ||| || ||| |||||||||||||||||||||| ||| ||||||    
T  26584140 gtcccttaacttattttcggattttattttggtcccctaactataaagtgtctcaatt 26584083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 265 - 322
Target Start/End: Original strand, 28225437 - 28225494
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    |||| |||||||| ||| |  |||||||||||||||||||||||||| ||| ||||||    
T  28225437 gtcccttaacttattttcgaatttcattttggtcccctaactataaagtgtctcaatt 28225494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 74; Significance: 1e-33; HSPs: 54)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 265 - 421
Target Start/End: Original strand, 12852899 - 12853056
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaa-ttggtcttataaatattttgtcgtttaccgttttggtcctctc 363  Q
    |||| ||||||||||||||| |||||||||||||||||||||||||| ||| |||| ||||||  |||||| || | ||||||||  |||||||| ||||    
T  12852899 gtcccttaacttacttttggatttcattttggtcccctaactataaagtgtctcaatttggtcccataaatcttctatcgtttactattttggtcatctc 12852998  T
Q  364 cattaatttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccata 421  Q
    | |||  |||||||||||||  ||||||||||||||| |||||||||||| |||||||    
T  12852999 cgttagattttaacatcaaaaatctaaggtgaaccatatttaaaggtggttcaccata 12853056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 260 - 528
Target Start/End: Complemental strand, 28109977 - 28109711
Alignment:
Q  260 atttagtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt-ggtcttataaatattttgtcgtttaccgttttggtc 358  Q
    |||| |||| |||||||| |||| ||||||| ||||||| | |||| ||||| | | |||||| ||||  |||| | || ||| ||||||| ||||||||    
T  28109977 atttggtcccttaacttatttttcgttttcaatttggtctcataacgataaagtatctcaatttggtcccataacttttctgtagtttaccattttggtc 28109878  T
Q  359 ctctccattaatttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccataaaccttataagttcatttaattttaaccattcgatan 458  Q
    |||||| ||| |||||||| | |||||||||||||||||||  |||  ||||||||||||||  | ||||||| ||||||||||||||||| || ||||     
T  28109877 ctctccgttattttttaaccttaaatgtctaaggtgaaccaactttgtaggtggtccaccatggatcttataaattcatttaattttaaccctttgatat 28109778  T
Q  459 nnnnnnncaaaaagagaaccgtttgatcatataagtatgttgtatcttacgatgaactatcaacacctaa 528  Q
            ||||| | ||||||| ||||||||| || ||||||||| |||| ||||| ||||||||||||    
T  28109777 taaaa---aaaaaaaaaaccgttggatcatatatgtctgttgtatcatacggtgaacaatcaacacctaa 28109711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 265 - 429
Target Start/End: Complemental strand, 29424715 - 29424550
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt-ggtcttataaatattttgtcgtttaccgttttggtcctctc 363  Q
    |||| |||||||| |||||||||| |  ||||||||||||||||||| |||||||||| ||||   | |||||| || ||||||  ||||||||||||||    
T  29424715 gtcccttaacttatttttggtttttacattggtcccctaactataaagtgtttcaatttggtcccttgaatattctgccgtttattgttttggtcctctc 29424616  T
Q  364 cattaatttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccataaaccttat 429  Q
      ||| ||  |||||||||||||||||| |||||||||||||||||||||||| |||| |||||||    
T  29424615 tgttagttactaacatcaaatgtctaagatgaaccatgtttaaaggtggtccatcatagaccttat 29424550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 292 - 429
Target Start/End: Original strand, 14509249 - 14509387
Alignment:
Q  292 tttggtcccctaactataaaatgtttcaatt-ggtcttataaatattttgtcgtttaccgttttggtcctctccattaatttttaacatcaaatgtctaa 390  Q
    ||||||||| |||||||||| ||||| |||| ||||  |||||| || ||||||||||  |||||||||||||| |||||||||||| | ||||||||||    
T  14509249 tttggtcccttaactataaagtgttttaattcggtcccataaatcttctgtcgtttactattttggtcctctccgttaatttttaaccttaaatgtctaa 14509348  T
Q  391 ggtgaaccatgtttaaaggtggtccaccataaaccttat 429  Q
    ||| |||||  |||| ||||||||||||||| |||||||    
T  14509349 ggtaaaccaactttataggtggtccaccatagaccttat 14509387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 251 - 418
Target Start/End: Original strand, 23177672 - 23177841
Alignment:
Q  251 taattcataatttagtcctttaacttacttttggttttcattttggtcccc-taactataaaatgtttcaatt-ggtcttataaatattttgtcgtttac 348  Q
    |||| ||| |||| |||| |||| ||| ||||||||||||||||||||||| |||||||||| ||| |||||| ||||  |||||| || || |||||||    
T  23177672 taatacatcatttggtcccttaatttatttttggttttcattttggtccccctaactataaagtgtctcaatttggtcccataaatcttctgccgtttac 23177771  T
Q  349 cgttttggtcctctccattaatttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccacc 418  Q
    | |||||||||||||| ||| |||||||||| |||  |||||| |||||||| ||||||| |||| ||||    
T  23177772 cattttggtcctctccgttagtttttaacataaaaaatctaagatgaaccatatttaaagatggttcacc 23177841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 251 - 418
Target Start/End: Original strand, 23588929 - 23589098
Alignment:
Q  251 taattcataatttagtcctttaacttacttttggttttcattttggtcccc-taactataaaatgtttcaatt-ggtcttataaatattttgtcgtttac 348  Q
    |||| ||| |||| |||| |||| ||| ||||||||||||||||||||||| |||||||||| ||| |||||| ||||  |||||| || || |||||||    
T  23588929 taatacatcatttggtcccttaatttatttttggttttcattttggtccccctaactataaagtgtctcaatttggtcccataaatcttctgccgtttac 23589028  T
Q  349 cgttttggtcctctccattaatttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccacc 418  Q
    | |||||||||||||| ||| |||||||||| |||  |||||| |||||||| ||||||| |||| ||||    
T  23589029 cattttggtcctctccgttagtttttaacataaaaaatctaagatgaaccatatttaaagatggttcacc 23589098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 351 - 421
Target Start/End: Original strand, 14714592 - 14714662
Alignment:
Q  351 ttttggtcctctccattaatttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccata 421  Q
    |||||||||||||| ||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  14714592 ttttggtcctctccgttagtttttaacatcaaatgtctaaggtgaaccatatttaaaggtggtccaccata 14714662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 265 - 429
Target Start/End: Complemental strand, 37869143 - 37868978
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaattg-gtcttataaatattttgtcgtttaccgttttggtcctctc 363  Q
    |||| |||||||| ||||| |||||| ||||||||| |||||||||| ||| ||||||  |||| |||| | || ||||||||||| |||||||| ||||    
T  37869143 gtcccttaacttatttttgattttcaatttggtcccttaactataaagtgtctcaatttagtctcataagtcttctgtcgtttacctttttggtcttctc 37869044  T
Q  364 cattaatttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccataaaccttat 429  Q
    | ||  |||||||| | ||||||||||||||| |||  |||| ||||||||||| ||| |||||||    
T  37869043 cgtttgtttttaaccttaaatgtctaaggtgagccaactttataggtggtccacaatagaccttat 37868978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 251 - 429
Target Start/End: Original strand, 7036965 - 7037144
Alignment:
Q  251 taattcataatttagtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaa-ttggtcttataaatattttgtcgtttacc 349  Q
    |||| ||| |||| ||||||||||||| |||||| ||||| ||| ||||| |||||||||| |||||||| ||||||  |||| | || || ||||||||    
T  7036965 taatacatcatttggtcctttaacttatttttggatttcactttagtcccttaactataaagtgtttcaatttggtcccataagtcttctgccgtttacc 7037064  T
Q  350 gttttggtcctctccattaatttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccataaaccttat 429  Q
     |||||||| | ||| || ||||||||| | |||| ||||||||||| ||  |||| ||||| |||||| ||||||||||    
T  7037065 attttggtcatttccgtttatttttaaccttaaatatctaaggtgaatcaactttataggtgatccaccgtaaaccttat 7037144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 342 - 421
Target Start/End: Complemental strand, 7983720 - 7983641
Alignment:
Q  342 cgtttaccgttttggtcctctccattaatttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccata 421  Q
    ||||||| ||||| ||||| | | | ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7983720 cgtttactgttttagtccttttcgtcaatttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccata 7983641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 270 - 431
Target Start/End: Original strand, 4829483 - 4829645
Alignment:
Q  270 ttaacttacttttggttttcattttggtcccctaactataaaatgtttcaattgg-tcttataaatattttgtcgtttaccgttttggtcctctccatta 368  Q
    |||||||| |||| ||||||| ||| ||||| |||||||||||||| |||||| | ||| |||||| || ||||||||||  |||||||||||||  |||    
T  4829483 ttaacttatttttcgttttcactttagtcccttaactataaaatgtctcaatttgatctcataaatcttatgtcgtttactattttggtcctctctgtta 4829582  T
Q  369 atttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccataaaccttataa 431  Q
     | |||||| | |||| |||||||| |||||  |||| ||||||||||||||| |||| ||||    
T  4829583 gtgtttaaccttaaatatctaaggtaaaccaactttataggtggtccaccatagacctcataa 4829645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 351 - 452
Target Start/End: Original strand, 4512206 - 4512307
Alignment:
Q  351 ttttggtcctctccattaatttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccataaaccttataagttcatttaattttaacca 450  Q
    |||||||||||||||||| ||||||||||||||| ||||||||||||||| || ||| |||||||||||||  |||||| | ||  ||||||||| ||||    
T  4512206 ttttggtcctctccattagtttttaacatcaaatatctaaggtgaaccatattaaaaagtggtccaccatatgccttattaatttttttaattttgacca 4512305  T
Q  451 tt 452  Q
    ||    
T  4512306 tt 4512307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 352 - 452
Target Start/End: Original strand, 26205114 - 26205214
Alignment:
Q  352 tttggtcctctccattaatttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccataaaccttataagttcatttaattttaaccat 451  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||||  ||||| |||||||||||||  |||||| | ||  || ||||||||||||    
T  26205114 tttggtcctctccgttagtttttaacatcaaatgtctaaggtgaaccatacttaaaagtggtccaccatatgccttattaattttttaaattttaaccat 26205213  T
Q  452 t 452  Q
    |    
T  26205214 t 26205214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 270 - 421
Target Start/End: Original strand, 35799530 - 35799682
Alignment:
Q  270 ttaacttacttttggttttcattttggtcccctaactataaaatgtttcaa-ttggtcttataaatattttgtcgtttaccgttttggtcctctccatta 368  Q
    |||||||| |||||||||||| ||| |||||||||||||||| ||| |||| ||||||| |||| | || |  ||||||||  ||||||||||||| |||    
T  35799530 ttaacttatttttggttttcaatttagtcccctaactataaagtgtctcaatttggtctcataacttttcttccgtttacctctttggtcctctccgtta 35799629  T
Q  369 atttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccata 421  Q
      ||||||| | |||||||||||||||| ||  |||| | |||||| ||||||    
T  35799630 gcttttaaccttaaatgtctaaggtgaatcaactttataagtggtctaccata 35799682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 260 - 450
Target Start/End: Complemental strand, 3528373 - 3528182
Alignment:
Q  260 atttagtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaa-ttggtcttataaatattttgtcgtttaccgttttggtc 358  Q
    |||| ||||||||| ||| ||||| |||| | ||||||| |  ||||||||| ||||| || ||||||| |||||| ||||||||||     || |||||    
T  3528373 atttggtcctttaatttatttttgatttttaatttggtcgctcaactataaagtgttttaagttggtctcataaatcttttgtcgttacttcttctggtc 3528274  T
Q  359 ctctccattaatttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccataaaccttataagttcatttaattttaacca 450  Q
     |||| |||| ||||||| | |||| |||||||||||||||| |||||||||||| ||||||| ||| ||| |  |  ||||||||||||||    
T  3528273 ttctctattagtttttaatagcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaattttaacca 3528182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 251 - 322
Target Start/End: Complemental strand, 11575572 - 11575501
Alignment:
Q  251 taattcataatttagtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    |||| ||| |||| |||| |||||||| |||||||||| |||||||||||||||||||||||||||||||||    
T  11575572 taatacatcatttggtccattaacttatttttggttttaattttggtcccctaactataaaatgtttcaatt 11575501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 366 - 420
Target Start/End: Original strand, 45047457 - 45047511
Alignment:
Q  366 ttaatttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccat 420  Q
    ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||    
T  45047457 ttaatttttaatatcaaatgtctaaggtgaaccatatttaaaggtggtccaccat 45047511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 270 - 429
Target Start/End: Original strand, 10367257 - 10367417
Alignment:
Q  270 ttaacttacttttggttttcattttggtcccctaactataaaatgtttcaattg-gtcttataaatattttgtcgtttaccgttttggtcctctccatta 368  Q
    |||||||| ||||| |||||| ||||||  | |||||||||| ||| ||||||  |||| |||| | || || |||||||| |||| ||| ||||| ||     
T  10367257 ttaacttatttttgattttcaatttggtttcttaactataaagtgtctcaatttagtctcataagtcttctgccgtttacctttttagtcgtctccgttt 10367356  T
Q  369 atttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccataaaccttat 429  Q
     |||||||| | |||||||||||||||||||  |||| ||||||||||| ||| |||||||    
T  10367357 gtttttaaccttaaatgtctaaggtgaaccaactttataggtggtccacaatagaccttat 10367417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 270 - 429
Target Start/End: Complemental strand, 12959803 - 12959643
Alignment:
Q  270 ttaacttacttttggttttcattttggtcccctaactataaaatgtttcaattg-gtcttataaatattttgtcgtttaccgttttggtcctctccatta 368  Q
    |||||||| ||||| |||| | ||||||||| |||| ||||| ||| ||||||  |||  |||||| || || |||||||| ||||| |||||||| ||     
T  12959803 ttaacttatttttgatttttaatttggtcccttaacaataaagtgtctcaatttagtccgataaatcttctgccgtttacctttttgatcctctccgttt 12959704  T
Q  369 atttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccataaaccttat 429  Q
     | |||||| | |||||||||||||||||||  |||| ||||||||||| ||| |||||||    
T  12959703 gtctttaaccttaaatgtctaaggtgaaccaactttataggtggtccacaatagaccttat 12959643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 351 - 429
Target Start/End: Complemental strand, 21010514 - 21010436
Alignment:
Q  351 ttttggtcctctccattaatttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccataaaccttat 429  Q
    |||||||||||||  ||| || |||||||||||||||||| ||||||| | ||||||||||||| | ||||||||||||    
T  21010514 ttttggtcctctctgttagttgttaacatcaaatgtctaatgtgaaccgtatttaaaggtggtctatcataaaccttat 21010436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 336 - 421
Target Start/End: Original strand, 3532279 - 3532364
Alignment:
Q  336 ttttgtcgtttaccgttttggtcctctccattaatttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccata 421  Q
    ||||||| |||||  |||| ||| ||||  || ||||||||||| |||||| ||||||||||||| ||||||||||||||||||||    
T  3532279 ttttgtcatttactattttagtcatctctgttgatttttaacattaaatgtttaaggtgaaccatatttaaaggtggtccaccata 3532364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 251 - 322
Target Start/End: Complemental strand, 41796069 - 41795998
Alignment:
Q  251 taattcataatttagtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    |||| ||| ||||||||| |||||||| ||||| ||||||||||| ||||||||||||||| ||| ||||||    
T  41796069 taatacatcatttagtcccttaacttatttttgattttcattttgatcccctaactataaagtgtctcaatt 41795998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 265 - 322
Target Start/End: Complemental strand, 3255981 - 3255924
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    |||| |||||||| ||| || |||||||||||||||||||||||||| ||||||||||    
T  3255981 gtcccttaacttattttcggatttcattttggtcccctaactataaagtgtttcaatt 3255924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 265 - 322
Target Start/End: Original strand, 3665237 - 3665294
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    |||| |||||||| ||| || |||||||||||||| ||||||||||||||||||||||    
T  3665237 gtcccttaacttattttcggatttcattttggtcctctaactataaaatgtttcaatt 3665294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 265 - 322
Target Start/End: Original strand, 6706939 - 6706996
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    |||| |||||||| |||||| |||||||||||||||||||||||||| ||| ||||||    
T  6706939 gtcccttaacttatttttggatttcattttggtcccctaactataaagtgtctcaatt 6706996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 351 - 420
Target Start/End: Complemental strand, 41296470 - 41296401
Alignment:
Q  351 ttttggtcctctccattaatttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccat 420  Q
    |||||||||||||| ||| ||||||||| ||||||||||| ||||| ||| || ||||||||| ||||||    
T  41296470 ttttggtcctctccgttagtttttaacaccaaatgtctaaagtgaatcatattaaaaggtggtgcaccat 41296401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 251 - 374
Target Start/End: Complemental strand, 23178999 - 23178875
Alignment:
Q  251 taattcataatttagtcctttaacttacttttggttttcattttggtcccctaactataaaatg-tttcaattggtcttataaatattttgtcgtttacc 349  Q
    |||| ||| |||| |||| |||||||| |||| ||||||| |||||||||||||||||||| || ||| ||||||||  |||||| ||  ||||||||      
T  23178999 taatccatcatttggtcccttaacttatttttagttttcactttggtcccctaactataaactgttttaaattggtcccataaatcttcagtcgtttatt 23178900  T
Q  350 gttttggtcctctccattaattttt 374  Q
     |||||||| ||||| ||| |||||    
T  23178899 attttggtcatctccgttagttttt 23178875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 251 - 374
Target Start/End: Complemental strand, 23590256 - 23590132
Alignment:
Q  251 taattcataatttagtcctttaacttacttttggttttcattttggtcccctaactataaaatg-tttcaattggtcttataaatattttgtcgtttacc 349  Q
    |||| ||| |||| |||| |||||||| |||| ||||||| |||||||||||||||||||| || ||| ||||||||  |||||| ||  ||||||||      
T  23590256 taatccatcatttggtcccttaacttatttttagttttcactttggtcccctaactataaactgttttaaattggtcccataaatcttcagtcgtttatt 23590157  T
Q  350 gttttggtcctctccattaattttt 374  Q
     |||||||| ||||| ||| |||||    
T  23590156 attttggtcatctccgttagttttt 23590132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 251 - 322
Target Start/End: Complemental strand, 7038449 - 7038378
Alignment:
Q  251 taattcataatttagtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    |||| ||| |||| |||| |||||||| |||||| ||||||||||||||| |||||||||| ||| ||||||    
T  7038449 taatacatcatttggtcccttaacttatttttggatttcattttggtcccttaactataaagtgtctcaatt 7038378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 251 - 322
Target Start/End: Original strand, 37867755 - 37867826
Alignment:
Q  251 taattcataatttagtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    |||| ||| |||| |||| |||||||| |||||||||||| |||| ||||||||||||||| ||| ||||||    
T  37867755 taatacatcatttggtcccttaacttatttttggttttcaatttgatcccctaactataaagtgtctcaatt 37867826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 260 - 322
Target Start/End: Original strand, 2581811 - 2581873
Alignment:
Q  260 atttagtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    |||| ||||| ||||||| |||||||||||| |||| ||||||||||||||| ||| ||||||    
T  2581811 atttggtcctctaacttatttttggttttcaatttgatcccctaactataaagtgtctcaatt 2581873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 351 - 429
Target Start/End: Complemental strand, 11575502 - 11575424
Alignment:
Q  351 ttttggtcctctccattaatttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccataaaccttat 429  Q
    |||||||||| ||| ||  |||||||| | |||||||||||||||| ||  |||| ||||| |||||||||||||||||    
T  11575502 ttttggtcctttccgtttgtttttaaccttaaatgtctaaggtgaatcaactttataggtgatccaccataaaccttat 11575424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 351 - 429
Target Start/End: Complemental strand, 25570886 - 25570808
Alignment:
Q  351 ttttggtcctctccattaatttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccataaaccttat 429  Q
    |||| ||||| ||| ||| |||||||  | |||||||||||||||||||  |||| ||||||||||||||| |||||||    
T  25570886 ttttagtcctttccgttagtttttaaacttaaatgtctaaggtgaaccaactttataggtggtccaccatagaccttat 25570808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 257 - 322
Target Start/End: Complemental strand, 3666379 - 3666314
Alignment:
Q  257 ataatttagtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    ||||||| |||| |||||||| ||| || ||||||||||||||| |||||||||| ||| ||||||    
T  3666379 ataatttggtcccttaacttattttcggatttcattttggtcccataactataaagtgtctcaatt 3666314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 265 - 318
Target Start/End: Original strand, 7182428 - 7182481
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttc 318  Q
    |||||||||||||||||| | ||||||||||||||| ||||||| ||| |||||    
T  7182428 gtcctttaacttactttttggtttcattttggtcccttaactattaaaagtttc 7182481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 265 - 322
Target Start/End: Original strand, 42027206 - 42027263
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    |||| |||||||| ||||| ||||||||||||||| ||||||| ||||||| ||||||    
T  42027206 gtcccttaacttatttttgattttcattttggtcctctaactacaaaatgtctcaatt 42027263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 265 - 322
Target Start/End: Original strand, 42246604 - 42246661
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    |||| |||||||  ||||||||||||||||| |||||||| |||||| ||||||||||    
T  42246604 gtcccttaacttgtttttggttttcattttgatcccctaattataaagtgtttcaatt 42246661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 270 - 311
Target Start/End: Complemental strand, 42368406 - 42368365
Alignment:
Q  270 ttaacttacttttggttttcattttggtcccctaactataaa 311  Q
    |||||||| |||||| ||||||||||||||||||||||||||    
T  42368406 ttaacttatttttggatttcattttggtcccctaactataaa 42368365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 270 - 322
Target Start/End: Original strand, 2305558 - 2305610
Alignment:
Q  270 ttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    |||||||| |||||| |||||||||| ||||||||||||||| ||| ||||||    
T  2305558 ttaacttatttttggatttcattttgatcccctaactataaagtgtctcaatt 2305610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 292 - 427
Target Start/End: Complemental strand, 7490271 - 7490135
Alignment:
Q  292 tttggtcccctaactataaaatgtttcaatt-ggtcttataaatattttgtcgtttaccgttttggtcctctccattaatttttaacatcaaatgtctaa 390  Q
    ||||||||  ||| |||||||||| |||||| ||||  |||||| |||| | ||||||  |||||||| | ||| ||| |||||||| | ||||||||||    
T  7490271 tttggtcctttaattataaaatgtctcaatttggtcccataaatcttttattgtttactattttggtcttatccgttagtttttaaccttaaatgtctaa 7490172  T
Q  391 ggtgaaccatgtttaaaggtggtccaccataaacctt 427  Q
    ||||||| |  |||| | |||  ||||||||||||||    
T  7490171 ggtgaacaaactttataagtgacccaccataaacctt 7490135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 274 - 322
Target Start/End: Complemental strand, 21012174 - 21012126
Alignment:
Q  274 cttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    |||| |||| |||||||||||| ||||||||||||||| ||||||||||    
T  21012174 cttattttttgttttcattttgatcccctaactataaagtgtttcaatt 21012126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 270 - 322
Target Start/End: Original strand, 33836787 - 33836839
Alignment:
Q  270 ttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    |||||||| ||| || |||||||||||||||||||||||||| ||| ||||||    
T  33836787 ttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatt 33836839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 378 - 425
Target Start/End: Complemental strand, 6708968 - 6708921
Alignment:
Q  378 atcaaatgtctaaggtgaaccatgtttaaaggtggtccaccataaacc 425  Q
    |||||| |||| ||||||||||| |||||||||||| |||||||||||    
T  6708968 atcaaaagtctgaggtgaaccatatttaaaggtggttcaccataaacc 6708921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 267 - 322
Target Start/End: Original strand, 11386639 - 11386694
Alignment:
Q  267 cctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    ||||||||||| |||| ||||| | ||||||||| |||||||||| ||||||||||    
T  11386639 cctttaacttatttttagtttttaatttggtcccttaactataaagtgtttcaatt 11386694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 265 - 334
Target Start/End: Complemental strand, 2583649 - 2583579
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaa-ttggtcttataaat 334  Q
    ||||| ||||||| |||||||||| | ||| |||||||||||||||| ||| |||| ||||||| ||||||    
T  2583649 gtcctctaacttatttttggtttttaattttgtcccctaactataaagtgtctcaatttggtctcataaat 2583579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 265 - 311
Target Start/End: Complemental strand, 14573911 - 14573865
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaa 311  Q
    |||| ||||| || |||||| ||||||||||||||||||||||||||    
T  14573911 gtcccttaacatatttttggatttcattttggtcccctaactataaa 14573865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 265 - 322
Target Start/End: Complemental strand, 2306763 - 2306707
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    |||| |||||||| |||||| ||||||||||||||||||||| |||| ||| ||||||    
T  2306763 gtcccttaactta-ttttggatttcattttggtcccctaactgtaaagtgtctcaatt 2306707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 265 - 322
Target Start/End: Complemental strand, 4630187 - 4630130
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    |||| |||||||| |||  | |||||||||||||||||||||||||| ||| ||||||    
T  4630187 gtcccttaacttattttcagatttcattttggtcccctaactataaagtgtctcaatt 4630130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 266 - 311
Target Start/End: Complemental strand, 6209166 - 6209121
Alignment:
Q  266 tcctttaacttacttttggttttcattttggtcccctaactataaa 311  Q
    |||||||||||| |||||| |||||||||||||  |||||||||||    
T  6209166 tcctttaacttatttttggatttcattttggtcatctaactataaa 6209121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 265 - 322
Target Start/End: Complemental strand, 12854207 - 12854150
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    |||| |||||||| |||| | ||||||||||||||| |||||||||| ||| ||||||    
T  12854207 gtcccttaacttatttttagatttcattttggtcccttaactataaagtgtctcaatt 12854150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 265 - 318
Target Start/End: Original strand, 18904708 - 18904761
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttc 318  Q
    |||| ||||||||||||| | |||| |||||||||||||||||| ||| |||||    
T  18904708 gtcccttaacttactttttggtttcgttttggtcccctaactattaaaagtttc 18904761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 265 - 322
Target Start/End: Complemental strand, 30202986 - 30202929
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    |||| |||||||| |||||| ||||| ||||||||||||||| |||| ||| ||||||    
T  30202986 gtcccttaacttatttttggatttcaatttggtcccctaactttaaactgtctcaatt 30202929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 265 - 310
Target Start/End: Complemental strand, 42249891 - 42249846
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataa 310  Q
    ||||||||||||| |||| |||||||||||| |||||||| |||||    
T  42249891 gtcctttaacttattttttgttttcattttgatcccctaattataa 42249846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 265 - 318
Target Start/End: Original strand, 45001131 - 45001184
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttc 318  Q
    |||| ||||||||||||| | |||| |||||||||||||||||| ||| |||||    
T  45001131 gtcccttaacttactttttggtttcgttttggtcccctaactattaaaagtttc 45001184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 65; Significance: 3e-28; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 270 - 421
Target Start/End: Complemental strand, 13302 - 13150
Alignment:
Q  270 ttaacttacttttggttttcattttggtcccctaactataaaatgtttcaattg-gtcttataaatattttgtcgtttaccgttttggtcctctccatta 368  Q
    |||||||| |||||||||||| |||||||||||||||||||||||| ||||||  |||  |||| | || |  ||||  |  |||||||||| |||||||    
T  13302 ttaacttatttttggttttcagtttggtcccctaactataaaatgtctcaatttcgtcccataactcttcttccgttacctcttttggtcctatccatta 13203  T
Q  369 atttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccata 421  Q
      |||||||||||||||||||||||||||||| ||||||| ||||||||||||    
T  13202 ggttttaacatcaaatgtctaaggtgaaccatatttaaagatggtccaccata 13150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 64; Significance: 1e-27; HSPs: 52)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 251 - 429
Target Start/End: Original strand, 5382941 - 5383120
Alignment:
Q  251 taattcataatttagtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt-ggtcttataaatattttgtcgtttacc 349  Q
    |||| ||| |||| |||| |||||||| |||||||||||  ||||||| ||||| |||||| ||| |||||| ||||  |||||| ||| |||||||||     
T  5382941 taatacatcatttggtcccttaacttatttttggttttctatttggtctcctaattataaagtgtctcaatttggtcccataaatctttggtcgtttact 5383040  T
Q  350 gttttggtcctctccattaatttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccataaaccttat 429  Q
     ||||| |||||||| ||| |||||||| | |||||||||||||||| ||  |||| ||||||||||||||| |||||||    
T  5383041 attttgatcctctccgttagtttttaaccttaaatgtctaaggtgaatcaactttataggtggtccaccatagaccttat 5383120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 270 - 429
Target Start/End: Original strand, 40058036 - 40058196
Alignment:
Q  270 ttaacttacttttggttttcattttggtcccctaactataaaatgtttcaa-ttggtcttataaatattttgtcgtttaccgttttggtcctctccatta 368  Q
    |||||||| ||||||||||||||||| |||| ||||||| || |||||||| ||||||| |||| | || || |||||||| |||||||| ||||| |||    
T  40058036 ttaacttatttttggttttcattttgatcccttaactattaagtgtttcaaattggtctcataactcttctgccgtttaccattttggtcatctccgtta 40058135  T
Q  369 atttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccataaaccttat 429  Q
     |||||||  | |||||||||||||||||||  |||| | || |||||||||| |||||||    
T  40058136 gtttttaatcttaaatgtctaaggtgaaccaactttataagtagtccaccatagaccttat 40058196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 251 - 429
Target Start/End: Complemental strand, 19525405 - 19525226
Alignment:
Q  251 taattcataatttagtcctttaacttacttttggttttcattttggtcccctaactataaaatgt-ttcaattggtcttataaatattttgtcgtttacc 349  Q
    |||| ||| |||| |||| |||||||| |||||||||||| |||||||||||||||||||| ||| | || ||||||  |||| | || || ||||||||    
T  19525405 taatacatcatttggtcccttaacttatttttggttttcaatttggtcccctaactataaagtgtctccatttggtcacataagtcttctgccgtttacc 19525306  T
Q  350 gttttggtcctctccattaatttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccataaaccttat 429  Q
     |||||||||||||| ||  |||||||| | |||| |||| |||||||||  |||| | ||||||||||||| |||||||    
T  19525305 attttggtcctctccgtttgtttttaaccttaaatttctatggtgaaccaactttatatgtggtccaccatagaccttat 19525226  T

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Target: chr5; HSP #4
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 260 - 429
Target Start/End: Original strand, 12933759 - 12933929
Alignment:
Q  260 atttagtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaa-ttggtcttataaatattttgtcgtttaccgttttggtc 358  Q
    ||||||||| |||||||| ||||||||||||||||| ||||||||||||||| ||| |||| ||| ||| |||| | || || |||||||| ||| ||||    
T  12933759 atttagtcccttaacttatttttggttttcattttgatcccctaactataaagtgtctcaatttgatctcataagtcttctgccgtttaccatttcggtc 12933858  T
Q  359 ctctccattaatttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccataaaccttat 429  Q
    || ||| || ||||||||| | |||| |||| | |||| ||  |||| ||||| |||||||||||||||||    
T  12933859 ctttccgtttatttttaaccttaaatatctatgatgaatcaactttataggtgatccaccataaaccttat 12933929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 260 - 429
Target Start/End: Original strand, 12947920 - 12948090
Alignment:
Q  260 atttagtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaa-ttggtcttataaatattttgtcgtttaccgttttggtc 358  Q
    ||||||||| |||||||| ||||| ||||||||||| ||||||||||||||| ||| |||| ||| ||| |||| | || ||||||||||| ||| ||||    
T  12947920 atttagtcccttaacttatttttgattttcattttgatcccctaactataaagtgtctcaatttgatctcataagtcttatgtcgtttaccatttcggtc 12948019  T
Q  359 ctctccattaatttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccataaaccttat 429  Q
    || ||| || ||||||||| | |||| |||| | |||| ||  |||| ||||| |||||||||||||||||    
T  12948020 ctttccgtttatttttaaccttaaatatctatgatgaatcaactttataggtgatccaccataaaccttat 12948090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 265 - 421
Target Start/End: Original strand, 18693711 - 18693868
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaat-tggtcttataaatattttgtcgtttaccgttttggtcctctc 363  Q
    |||| |||||||| |||||  ||| ||||||||||| |||||||||||||| ||||| |||||  |||||| || |||||||  |  |||||||||||||    
T  18693711 gtcccttaacttatttttgaattttattttggtcccttaactataaaatgtctcaatctggtcccataaatcttctgtcgttacctcttttggtcctctc 18693810  T
Q  364 cattaatttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccata 421  Q
      ||| ||||||||||||||  ||||||||||||||| | |||||||||| |||||||    
T  18693811 tgttagtttttaacatcaaaactctaaggtgaaccatatataaaggtggttcaccata 18693868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 265 - 421
Target Start/End: Original strand, 21387650 - 21387807
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaa-ttggtcttataaatattttgtcgtttaccgttttggtcctctc 363  Q
    |||| |||||||| |||||  |||||||||||||||||||||||||||||| |||| ||||||  |||||| || || ||||  |  |||||||||| ||    
T  21387650 gtcccttaacttatttttgaatttcattttggtcccctaactataaaatgtctcaatttggtcccataaatcttctgccgttacctcttttggtcctgtc 21387749  T
Q  364 cattaatttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccata 421  Q
      ||| ||||||||||||||  ||||||||||| ||| |||||||||||| |||||||    
T  21387750 tgttagtttttaacatcaaaactctaaggtgaaacatatttaaaggtggttcaccata 21387807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 270 - 407
Target Start/End: Complemental strand, 7345488 - 7345350
Alignment:
Q  270 ttaacttacttttggttttcattttggtcccctaactataaaatgtttcaa-ttggtcttataaatattttgtcgtttaccgttttggtcctctccatta 368  Q
    |||||||| |||||  |||||||||||||| ||||||||||| ||| |||| ||||||  |||||||||||||||||  |  ||||||||||||    ||    
T  7345488 ttaacttatttttgaatttcattttggtcctctaactataaagtgtctcaatttggtcccataaatattttgtcgttatctcttttggtcctctatgata 7345389  T
Q  369 atttttaacatcaaatgtctaaggtgaaccatgtttaaa 407  Q
     ||||||||||||||  ||||||||||||||| ||||||    
T  7345388 gtttttaacatcaaaactctaaggtgaaccatatttaaa 7345350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 368 - 429
Target Start/End: Original strand, 7426758 - 7426819
Alignment:
Q  368 aatttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccataaaccttat 429  Q
    ||||||||||||||||||||||||||||| ||| |||||||||||||||||||| |||||||    
T  7426758 aatttttaacatcaaatgtctaaggtgaatcatatttaaaggtggtccaccatagaccttat 7426819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 251 - 358
Target Start/End: Original strand, 18677975 - 18678083
Alignment:
Q  251 taattcataatttagtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaa-ttggtcttataaatattttgtcgtttacc 349  Q
    |||| ||| |||| |||| |||||||| |||||||||||| |||| ||||||||||||||| ||| |||| ||||||  |||||| || |||||||||||    
T  18677975 taatacatcatttggtcccttaacttatttttggttttcactttgatcccctaactataaagtgtctcaatttggtcccataaatcttctgtcgtttacc 18678074  T
Q  350 gttttggtc 358  Q
    |||||||||    
T  18678075 gttttggtc 18678083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 266 - 421
Target Start/End: Original strand, 38471303 - 38471459
Alignment:
Q  266 tcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt-ggtcttataaatattttgtcgtttaccgttttggtcctctcc 364  Q
    |||||||||||| |||||  ||||||||||||||| ||||| |||| |||||||||| |||   |||||| || |  |||||||  ||||||| |||||     
T  38471303 tcctttaacttatttttgaatttcattttggtcccttaactttaaattgtttcaatttggttccataaatcttcttccgtttactattttggttctctct 38471402  T
Q  365 attaatttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccata 421  Q
     |||||||||||| | |||||| ||||||||||||  |||| |||||||| ||||||    
T  38471403 gttaatttttaaccttaaatgtttaaggtgaaccaactttataggtggtctaccata 38471459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 251 - 322
Target Start/End: Complemental strand, 12936219 - 12936148
Alignment:
Q  251 taattcataatttagtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    |||| ||| ||||||||| |||||||| ||||||||||||||||||||||||||||||||| ||| ||||||    
T  12936219 taatacatcatttagtcccttaacttatttttggttttcattttggtcccctaactataaagtgtctcaatt 12936148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 251 - 315
Target Start/End: Original strand, 41905174 - 41905238
Alignment:
Q  251 taattcataatttagtcctttaacttacttttggttttcattttggtcccctaactataaaatgt 315  Q
    |||| ||| |||| |||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  41905174 taatacatcatttggtcccttaacttatttttggttttcattttggtcccctaactataaaatgt 41905238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 251 - 322
Target Start/End: Complemental strand, 12950377 - 12950306
Alignment:
Q  251 taattcataatttagtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    |||| ||| ||||||||| |||||||| || |||||||||||||||||||||||||||||| ||| ||||||    
T  12950377 taatacatcatttagtcccttaacttatttatggttttcattttggtcccctaactataaagtgtctcaatt 12950306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 260 - 358
Target Start/End: Original strand, 19523991 - 19524089
Alignment:
Q  260 atttagtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaa-ttggtcttataaatattttgtcgtttaccgttttggtc 358  Q
    |||| |||| |||||||| |||||||||||| ||||||||| |||||||||| ||| |||| |||||| ||||||| || ||||||||||| ||||||||    
T  19523991 atttggtcccttaacttatttttggttttcaatttggtcccttaactataaagtgtctcaatttggtc-tataaattttctgtcgtttaccattttggtc 19524089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 263 - 363
Target Start/End: Original strand, 26403318 - 26403419
Alignment:
Q  263 tagtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaa-ttggtcttataaatattttgtcgtttaccgttttggtcctc 361  Q
    ||||||||||||||| ||||| |||||| ||||||||| |||||||||| ||| |||| ||| ||| |||||| || ||||||||||  |||||||| ||    
T  26403318 tagtcctttaacttatttttgattttcaatttggtcccttaactataaagtgtctcaatttgatctcataaattttatgtcgtttactattttggtcttc 26403417  T
Q  362 tc 363  Q
    ||    
T  26403418 tc 26403419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 270 - 357
Target Start/End: Complemental strand, 27894121 - 27894033
Alignment:
Q  270 ttaacttacttttggttttcattttggtcccctaactataaaatgtttcaa-ttggtcttataaatattttgtcgtttaccgttttggt 357  Q
    |||||||| |||| ||||||| |||||||||||||||||||| |||||||| ||||||| |||||| ||  |||||||||  |||||||    
T  27894121 ttaacttattttttgttttcactttggtcccctaactataaagtgtttcaatttggtctcataaattttccgtcgtttactattttggt 27894033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 257 - 374
Target Start/End: Complemental strand, 40059439 - 40059321
Alignment:
Q  257 ataatttagtcctttaacttacttttggttttcattttggtcccctaactataaaatg-tttcaattggtcttataaatattttgtcgtttaccgttttg 355  Q
    ||||||| |||| |||||||| ||||||||||||||||| |||||||||||| || || ||| ||||||||  |||| | || || |||||| | |||||    
T  40059439 ataatttggtcccttaacttatttttggttttcattttgatcccctaactattaagtgttttaaattggtccaataactcttctgccgtttatcattttg 40059340  T
Q  356 gtcctctccattaattttt 374  Q
    ||  ||||| |||||||||    
T  40059339 gtgatctccgttaattttt 40059321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 285 - 394
Target Start/End: Original strand, 42510147 - 42510257
Alignment:
Q  285 ttttcattttggtcccctaactataaaatgtttcaatt-ggtcttataaatattttgtcgtttaccgttttggtcctctccattaatttttaacatcaaa 383  Q
    |||||| ||||||||| |||||||||| ||| |||||| ||||  |||||| || || |||||||  ||||||| |||||| ||| |||||||| |||||    
T  42510147 ttttcagtttggtcccttaactataaagtgtctcaatttggtcccataaatcttctgccgtttactattttggttctctccgttagtttttaacctcaaa 42510246  T
Q  384 tgtctaaggtg 394  Q
    |||||| ||||    
T  42510247 tgtctatggtg 42510257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 270 - 374
Target Start/End: Original strand, 15613523 - 15613628
Alignment:
Q  270 ttaacttacttttggttttcattttggtcccctaactataaaatgtttcaa-ttggtcttataaatattttgtcgtttaccgttttggtcctctccatta 368  Q
    |||||||| |||||| |||||||||||||  ||||||||||| ||| |||| ||||||  |||||| || |  |||||||  |||||||||||||| |||    
T  15613523 ttaacttatttttggatttcattttggtcttctaactataaagtgtctcaatttggtcccataaatcttcttccgtttactattttggtcctctccgtta 15613622  T
Q  369 attttt 374  Q
    ||||||    
T  15613623 attttt 15613628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 251 - 374
Target Start/End: Original strand, 1273088 - 1273212
Alignment:
Q  251 taattcataatttagtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaa-ttggtcttataaatattttgtcgtttacc 349  Q
    |||| ||| |||| |||| |||| ||| |||||||||||||||||||||  |||||||||||||| |||| ||||||  |||||| || ||  ||||||     
T  1273088 taatacatcatttggtcccttaatttatttttggttttcattttggtcctttaactataaaatgtctcaatttggtcccataaatcttctgcagtttaca 1273187  T
Q  350 gttttggtcctctccattaattttt 374  Q
     ||||||||| |||| ||| |||||    
T  1273188 attttggtcccctccgttagttttt 1273212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 279 - 374
Target Start/End: Original strand, 42979475 - 42979571
Alignment:
Q  279 ttttggttttcattttggtcccctaactataaaatgtttcaa-ttggtcttataaatattttgtcgtttaccgttttggtcctctccattaattttt 374  Q
    |||||| |||||||||||||| ||||||||||| |||||||| ||||||  |||| | || || |||||||  |||||||||||||| || ||||||    
T  42979475 ttttggatttcattttggtcctctaactataaagtgtttcaatttggtccaataattcttctgccgtttactattttggtcctctccgttgattttt 42979571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 265 - 370
Target Start/End: Complemental strand, 8762503 - 8762397
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaa-ttggtcttataaatattttgtcgtttaccgttttggtcctctc 363  Q
    |||| |||||||| ||||  |||||| ||||||||| | |||||||||||| |||| ||||||  |||||| || ||||||||||  |||| ||||||||    
T  8762503 gtcccttaacttatttttaattttcaatttggtcccatgactataaaatgtctcaatttggtcacataaattttatgtcgtttactattttagtcctctc 8762404  T
Q  364 cattaat 370  Q
    | |||||    
T  8762403 cgttaat 8762397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 563 - 613
Target Start/End: Original strand, 32734437 - 32734487
Alignment:
Q  563 tcatctccttcatcaacacattcatactctttagtcaattttcatataacc 613  Q
    ||||||||||||||| ||||||||||||| ||| ||||| |||||||||||    
T  32734437 tcatctccttcatcatcacattcatactccttaatcaatcttcatataacc 32734487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 265 - 322
Target Start/End: Complemental strand, 224693 - 224636
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    |||| |||||||| |||  |||||||||||||||||||||||||||| ||| ||||||    
T  224693 gtcccttaacttattttatgttttcattttggtcccctaactataaagtgtctcaatt 224636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 265 - 322
Target Start/End: Complemental strand, 1273443 - 1273386
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    |||| |||||||| |||||||||||||||||||||| ||| |||||| ||| ||||||    
T  1273443 gtcccttaacttatttttggttttcattttggtcccttaattataaagtgtctcaatt 1273386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 265 - 322
Target Start/End: Complemental strand, 4568077 - 4568020
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    |||| |||||||| ||| || |||||||||||||||||||||||||| ||| ||||||    
T  4568077 gtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatt 4568020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 251 - 320
Target Start/End: Original strand, 6629730 - 6629799
Alignment:
Q  251 taattcataatttagtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaa 320  Q
    |||| ||| |||| |||| |||||||| || ||||||||| |||||||||||||||||||| ||| ||||    
T  6629730 taatacatcatttggtcccttaacttatttgtggttttcactttggtcccctaactataaagtgtctcaa 6629799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 351 - 428
Target Start/End: Complemental strand, 12830954 - 12830877
Alignment:
Q  351 ttttggtcctctccattaatttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccataaacctta 428  Q
    |||||||||||||| ||||||||||||   |||| ||| ||||||||||   ||| ||||||||||||||| ||||||    
T  12830954 ttttggtcctctccgttaatttttaaccctaaatatcttaggtgaaccaacattataggtggtccaccatagacctta 12830877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 351 - 428
Target Start/End: Complemental strand, 12862934 - 12862857
Alignment:
Q  351 ttttggtcctctccattaatttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccataaacctta 428  Q
    |||||||||||||| ||||||||||||   |||| ||| ||||||||||   ||| ||||||||||||||| ||||||    
T  12862934 ttttggtcctctccgttaatttttaaccctaaatatcttaggtgaaccaacattataggtggtccaccatagacctta 12862857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 269 - 322
Target Start/End: Complemental strand, 22650727 - 22650674
Alignment:
Q  269 tttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    ||||||||| ||| || |||||||||||||||||||||||||| ||| ||||||    
T  22650727 tttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatt 22650674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 251 - 358
Target Start/End: Complemental strand, 19827257 - 19827149
Alignment:
Q  251 taattcataatttagtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaa-ttggtcttataaatattttgtcgtttacc 349  Q
    |||| ||| ||||||||  |||||||| |||||||||||| ||||||||| ||| |||||| ||| |||| ||||||  |||||| || |  ||||||||    
T  19827257 taatacatcatttagtctcttaacttatttttggttttcaatttggtcccataattataaagtgtctcaatttggtcccataaatcttcttccgtttacc 19827158  T
Q  350 gttttggtc 358  Q
     ||||||||    
T  19827157 attttggtc 19827149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 270 - 322
Target Start/End: Complemental strand, 20991747 - 20991695
Alignment:
Q  270 ttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    |||||||| ||| || ||||||||||| |||||||||||||||||| ||||||    
T  20991747 ttaacttattttcggatttcattttggccccctaactataaaatgtctcaatt 20991695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 370 - 429
Target Start/End: Complemental strand, 2167512 - 2167453
Alignment:
Q  370 tttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccataaaccttat 429  Q
    |||||||| | |||||||||||||||||||  |||| || |||||||||||| |||||||    
T  2167512 tttttaaccttaaatgtctaaggtgaaccaactttatagatggtccaccatagaccttat 2167453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 251 - 322
Target Start/End: Original strand, 5975755 - 5975826
Alignment:
Q  251 taattcataatttagtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    |||| ||| |||| ||||||||||||| ||||  |||| ||||||||||||||| |||||| ||| ||||||    
T  5975755 taatacatcatttggtcctttaacttattttttattttaattttggtcccctaattataaagtgtctcaatt 5975826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 265 - 363
Target Start/End: Complemental strand, 15615063 - 15614964
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaa-ttggtcttataaatattttgtcgtttaccgttttggtcctctc 363  Q
    |||| ||| |||| |||||| |||||||||||||| ||||||||||| ||| |||| |||||   |||||| || || |||||||  |||||||||||||    
T  15615063 gtcccttatcttatttttggatttcattttggtccgctaactataaagtgtctcaatttggttccataaattttctgccgtttactattttggtcctctc 15614964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 292 - 374
Target Start/End: Complemental strand, 15857694 - 15857611
Alignment:
Q  292 tttggtcccctaactataaaatgtttcaattggt-cttataaatattttgtcgtttaccgttttggtcctctccattaattttt 374  Q
    ||||||||| |||||||||| |||||||||| || |  |||||| || ||||||||||| |||||||| ||||| ||| |||||    
T  15857694 tttggtcccttaactataaagtgtttcaatttgttcccataaatcttatgtcgtttaccattttggtcatctccgttagttttt 15857611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 269 - 374
Target Start/End: Complemental strand, 42980808 - 42980702
Alignment:
Q  269 tttaacttacttttggttttcattttggtcccctaactataaaatgtttcaa-ttggtcttataaatattttgtcgtttaccgttttggtcctctccatt 367  Q
    ||||| ||| |||| | ||||||||||||||  |||||||||| ||| |||| ||||||| ||| || || || | |||||| |||||||||| ||| ||    
T  42980808 tttaatttatttttagatttcattttggtcctataactataaagtgtctcaatttggtctcatatatcttctgccatttaccattttggtcctttccgtt 42980709  T
Q  368 aattttt 374  Q
    |||||||    
T  42980708 aattttt 42980702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 265 - 322
Target Start/End: Original strand, 326357 - 326414
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    ||||||||||||| |||||||||||| |||| ||||  ||||||||| ||| ||||||    
T  326357 gtcctttaacttatttttggttttcaatttgatccctcaactataaagtgtctcaatt 326414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 265 - 322
Target Start/End: Original strand, 5061041 - 5061098
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    |||| |||||||| |||||| |||||||||||||||||||  ||||| ||| ||||||    
T  5061041 gtcccttaacttatttttggatttcattttggtcccctaatgataaagtgtctcaatt 5061098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 265 - 318
Target Start/End: Original strand, 6131942 - 6131995
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttc 318  Q
    |||| ||||||||||||| | ||||||||||||||| ||||||| ||| |||||    
T  6131942 gtcccttaacttactttttggtttcattttggtcccttaactattaaaagtttc 6131995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 265 - 306
Target Start/End: Original strand, 6132002 - 6132043
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaact 306  Q
    |||||||||||||||||| | ||||||||||||||| |||||    
T  6132002 gtcctttaacttactttttggtttcattttggtcccttaact 6132043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 321 - 370
Target Start/End: Original strand, 10084668 - 10084717
Alignment:
Q  321 ttggtcttataaatattttgtcgtttaccgttttggtcctctccattaat 370  Q
    ||||||| |||||| |||||||||||||  |||||||||||||| |||||    
T  10084668 ttggtctcataaatcttttgtcgtttactattttggtcctctccgttaat 10084717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 265 - 306
Target Start/End: Complemental strand, 14858495 - 14858454
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaact 306  Q
    |||||||||||||||||| | ||||||||||||||| |||||    
T  14858495 gtcctttaacttactttttggtttcattttggtcccttaact 14858454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 265 - 322
Target Start/End: Original strand, 15509208 - 15509265
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    |||| |||||||| ||| || ||| |||||||||||||||||||||| ||| ||||||    
T  15509208 gtcccttaacttattttcggattttattttggtcccctaactataaagtgtctcaatt 15509265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 265 - 322
Target Start/End: Complemental strand, 15510366 - 15510309
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    |||| |||||||| ||| || |||||||||| ||||||||||||||| ||| ||||||    
T  15510366 gtcccttaacttattttcggatttcattttgatcccctaactataaagtgtctcaatt 15510309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 265 - 322
Target Start/End: Original strand, 19050762 - 19050819
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    |||| |||||||| |||||| ||||| ||||||||||||||| |||| ||| ||||||    
T  19050762 gtcccttaacttatttttggatttcaatttggtcccctaactttaaactgtctcaatt 19050819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 251 - 312
Target Start/End: Original strand, 19825873 - 19825934
Alignment:
Q  251 taattcataatttagtcctttaacttacttttggttttcattttggtcccctaactataaaa 312  Q
    |||| ||| |||| |||| |||||||| |||||||||||| |||| ||||||||||| ||||    
T  19825873 taatacatcatttggtcccttaacttatttttggttttcaatttgatcccctaactaaaaaa 19825934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 265 - 322
Target Start/End: Original strand, 20988703 - 20988760
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    |||| |||||||| ||| |  |||||||||||||||||||||||||| ||| ||||||    
T  20988703 gtcccttaacttattttcgaatttcattttggtcccctaactataaagtgtctcaatt 20988760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 265 - 306
Target Start/End: Complemental strand, 22803510 - 22803469
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaact 306  Q
    |||||||||||||||||| | ||||||||||||||| |||||    
T  22803510 gtcctttaacttactttttggtttcattttggtcccttaact 22803469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 265 - 318
Target Start/End: Complemental strand, 22803570 - 22803517
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttc 318  Q
    |||| ||||||||||||| | ||||||||||||||| ||||||| ||| |||||    
T  22803570 gtcccttaacttactttttggtttcattttggtcccttaactattaaaagtttc 22803517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 265 - 318
Target Start/End: Original strand, 37812309 - 37812362
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttc 318  Q
    |||| ||||||||||||| | ||||||||||||||| ||||||| ||| |||||    
T  37812309 gtcccttaacttactttttggtttcattttggtcccttaactattaaaagtttc 37812362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 63; Significance: 5e-27; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 260 - 429
Target Start/End: Complemental strand, 56808 - 56638
Alignment:
Q  260 atttagtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt-ggtcttataaatattttgtcgtttaccgttttggtc 358  Q
    |||| |||| |||||||| |||| | ||||| ||||||||||||| |||||| ||| |||||| |||| ||||||| || || ||||||| |||| | ||    
T  56808 atttggtcccttaacttattttttgatttcactttggtcccctaattataaagtgtctcaatttggtcctataaatcttctgccgtttactgtttagatc 56709  T
Q  359 ctctccattaatttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccataaaccttat 429  Q
    ||||| |||| ||||||||||||||| |||||||  ||| |||||||||| |||||||||| | |||||||    
T  56708 ctctctattagtttttaacatcaaatatctaagggaaactatgtttaaagatggtccaccaaagaccttat 56638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 59; Significance: 1e-24; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 351 - 421
Target Start/End: Complemental strand, 207814 - 207744
Alignment:
Q  351 ttttggtcctctccattaatttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccata 421  Q
    |||||||||||||| ||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  207814 ttttggtcctctccgttagtttttaacatcaaatgtcttaggtgaaccatgtttaaaggtggtccaccata 207744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1974 (Bit Score: 57; Significance: 2e-23; HSPs: 1)
Name: scaffold1974
Description:

Target: scaffold1974; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 251 - 418
Target Start/End: Complemental strand, 745 - 577
Alignment:
Q  251 taattcataatttagtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaattg-gtcttataaatattttgtcgtttacc 349  Q
    |||| ||| |||| |||| |||||||| |||| ||| ||| |||||||||||||||||||| ||| ||||||  |||  |||||| || || ||||||||    
T  745 taatacatcatttggtcccttaacttattttttgttatcactttggtcccctaactataaagtgtctcaatttagtcccataaatcttctgccgtttacc 646  T
Q  350 gttttggtcctctccattaatttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccacc 418  Q
     |||||||| ||||| ||| |||||||||| |||  ||||||||||||||| ||||||| |||| ||||    
T  645 attttggtcatctccgttagtttttaacataaaaaatctaaggtgaaccatatttaaagatggttcacc 577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1878 (Bit Score: 57; Significance: 2e-23; HSPs: 1)
Name: scaffold1878
Description:

Target: scaffold1878; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 251 - 418
Target Start/End: Original strand, 529 - 697
Alignment:
Q  251 taattcataatttagtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaattg-gtcttataaatattttgtcgtttacc 349  Q
    |||| ||| |||| |||| |||||||| |||| ||| ||| |||||||||||||||||||| ||| ||||||  |||  |||||| || || ||||||||    
T  529 taatacatcatttggtcccttaacttattttttgttatcactttggtcccctaactataaagtgtctcaatttagtcccataaatcttctgccgtttacc 628  T
Q  350 gttttggtcctctccattaatttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccacc 418  Q
     |||||||| ||||| ||| |||||||||| |||  ||||||||||||||| ||||||| |||| ||||    
T  629 attttggtcatctccgttagtttttaacataaaaaatctaaggtgaaccatatttaaagatggttcacc 697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290 (Bit Score: 57; Significance: 2e-23; HSPs: 2)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 251 - 418
Target Start/End: Complemental strand, 9595 - 9427
Alignment:
Q  251 taattcataatttagtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaattg-gtcttataaatattttgtcgtttacc 349  Q
    |||| ||| |||| |||| |||||||| |||| ||| ||| |||||||||||||||||||| ||| ||||||  |||  |||||| || || ||||||||    
T  9595 taatacatcatttggtcccttaacttattttttgttatcactttggtcccctaactataaagtgtctcaatttagtcccataaatcttctgccgtttacc 9496  T
Q  350 gttttggtcctctccattaatttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccacc 418  Q
     |||||||| ||||| ||| |||||||||| |||  ||||||||||||||| ||||||| |||| ||||    
T  9495 attttggtcatctccgttagtttttaacataaaaaatctaaggtgaaccatatttaaagatggttcacc 9427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 251 - 320
Target Start/End: Original strand, 8378 - 8447
Alignment:
Q  251 taattcataatttagtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaa 320  Q
    |||| ||| |||| |||| |||||||| |||||||||||| |||| ||||||||||||||| ||| ||||    
T  8378 taatccatcatttggtcccttaacttatttttggttttcactttgctcccctaactataaactgtctcaa 8447  T

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Target: scaffold0098 (Bit Score: 57; Significance: 2e-23; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 321 - 421
Target Start/End: Original strand, 40978 - 41078
Alignment:
Q  321 ttggtcttataaatattttgtcgtttaccgttttggtcctctccattaatttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccat 420  Q
    ||||||| |||| | || |||||||||| ||||| || |||||  ||| ||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  40978 ttggtctcataagtcttctgtcgtttactgttttagttctctctgttagtttttaacatcaaatgtctaaggtgaaccatatttaaaggtggtccaccat 41077  T
Q  421 a 421  Q
    |    
T  41078 a 41078  T

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Target: scaffold0003 (Bit Score: 48; Significance: 5e-18; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 251 - 429
Target Start/End: Original strand, 47069 - 47248
Alignment:
Q  251 taattcataatttagtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt-ggtcttataaatattttgtcgtttacc 349  Q
    |||| ||| |||| |||| |||||||| |||||  |||||||||| |||| ||||| |||| ||| |||||| ||||  |||||| || |  |||||||     
T  47069 taatacatcatttggtcccttaacttatttttgaatttcattttgatcccttaactttaaattgtctcaatttggtcccataaatcttcttccgtttact 47168  T
Q  350 gttttggtcctctccattaatttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccataaaccttat 429  Q
     |||||||||||||| |||||||||||| | ||||||||||||||||  |  |||  |||||||| ||||||||| ||||    
T  47169 attttggtcctctccgttaatttttaactttaaatgtctaaggtgaattaactttgtaggtggtctaccataaactttat 47248  T

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Target: scaffold0003; HSP #2
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 251 - 374
Target Start/End: Complemental strand, 48573 - 48449
Alignment:
Q  251 taattcataatttagtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaa-ttggtcttataaatattttgtcgtttacc 349  Q
    |||| ||| |||| |||| |||||||| |||||| ||||||||||||||  |||||||||| ||| |||| ||| ||  ||||||||| || |||||||     
T  48573 taatacatcatttggtcccttaacttatttttggatttcattttggtcctttaactataaagtgtctcaatttgatcccataaatattctgccgtttact 48474  T
Q  350 gttttggtcctctccattaattttt 374  Q
     |||||||| ||||| |||||||||    
T  48473 cttttggtcatctccgttaattttt 48449  T

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Target: scaffold0051 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 270 - 420
Target Start/End: Complemental strand, 39999 - 39848
Alignment:
Q  270 ttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt-ggtcttataaatattttgtcgtttaccgttttggtcctctccatta 368  Q
    |||||||| |||||| ||||| ||||||||||||| |||||| ||| |||||| ||||  |||||| ||    | ||  |  |||||||||||||  |||    
T  39999 ttaacttatttttggatttcactttggtcccctaagtataaagtgtctcaatttggtcccataaatcttcccacattacctcttttggtcctctctgtta 39900  T
Q  369 atttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccat 420  Q
     |||||||||||||| |||||||||||| ||| |||||||||||| ||||||    
T  39899 gtttttaacatcaaaagtctaaggtgaatcatatttaaaggtggttcaccat 39848  T

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Target: scaffold0178 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 265 - 322
Target Start/End: Complemental strand, 2368 - 2311
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    |||| |||||||| |||||||||||||||||||||||||| |||||| ||||||||||    
T  2368 gtcccttaacttatttttggttttcattttggtcccctaattataaagtgtttcaatt 2311  T

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Target: scaffold0046 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 265 - 322
Target Start/End: Original strand, 23419 - 23476
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    |||| |||||||| |||||||||||| |||||||||||||||||||||||| ||||||    
T  23419 gtcccttaacttatttttggttttcagtttggtcccctaactataaaatgtctcaatt 23476  T

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Target: scaffold0046; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 265 - 322
Target Start/End: Complemental strand, 24918 - 24861
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    |||| |||| ||| |||||||||||| ||||||||||||| |||||| ||||||||||    
T  24918 gtcccttaatttatttttggttttcagtttggtcccctaattataaagtgtttcaatt 24861  T

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Target: scaffold2127 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold2127
Description:

Target: scaffold2127; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 270 - 364
Target Start/End: Complemental strand, 613 - 518
Alignment:
Q  270 ttaacttacttttggttttcattttggtcccctaactataaaatgtttcaa-ttggtcttataaatattttgtcgtttaccgttttggtcctctcc 364  Q
    |||||||| |||||||||||| || ||||||||||||||||| ||| |||| ||||| | |||||| || || |||||||  ||||||||||||||    
T  613 ttaacttatttttggttttcaattaggtcccctaactataaagtgtctcaatttggtgtcataaatcttatgccgtttactattttggtcctctcc 518  T

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Target: scaffold0024 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 251 - 311
Target Start/End: Complemental strand, 73103 - 73043
Alignment:
Q  251 taattcataatttagtcctttaacttacttttggttttcattttggtcccctaactataaa 311  Q
    |||| ||| ||||||||| |||||||| |||||||||||| |||||||||||||| |||||    
T  73103 taatacatcatttagtcccttaacttatttttggttttcactttggtcccctaacaataaa 73043  T

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Target: scaffold0369 (Bit Score: 36; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 270 - 368
Target Start/End: Original strand, 12928 - 13027
Alignment:
Q  270 ttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt-ggtcttataaatattttgtcgtttaccgttttggtcctctccatta 368  Q
    |||||||| ||||| |||| | ||||||||| ||| |||||| ||| |||||| ||||| |||||||||||||||||||   |||||||  |||||||||    
T  12928 ttaacttatttttgatttttactttggtcccataattataaagtgtctcaatttggtctcataaatattttgtcgtttagtattttggtaatctccatta 13027  T

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Target: scaffold0122 (Bit Score: 36; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 342 - 429
Target Start/End: Original strand, 16036 - 16123
Alignment:
Q  342 cgtttaccgttttggtcctctccattaatttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccataaaccttat 429  Q
    |||||||  |||| ||||||||| ||| |||||||| | ||||||||||| |||||||  |||| || |||||||||||| |||||||    
T  16036 cgtttactattttagtcctctccgttagtttttaaccttaaatgtctaagatgaaccaactttatagatggtccaccatagaccttat 16123  T

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Target: scaffold0038 (Bit Score: 33; Significance: 0.000000004; HSPs: 2)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 270 - 322
Target Start/End: Complemental strand, 27014 - 26962
Alignment:
Q  270 ttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    |||||||| ||| || |||||||||||||||||||||||||| ||| ||||||    
T  27014 ttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatt 26962  T

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Target: scaffold0038; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 265 - 322
Target Start/End: Original strand, 25935 - 25992
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    |||| |||||||| ||| |  |||||||||||||||||||||||||| ||| ||||||    
T  25935 gtcccttaacttattttcgaatttcattttggtcccctaactataaagtgtctcaatt 25992  T

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Target: scaffold0013 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 251 - 322
Target Start/End: Original strand, 96159 - 96230
Alignment:
Q  251 taattcataatttagtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    |||| ||| |||| |||| |||||||| ||| | |||||| |||||||||||||||||||| ||| ||||||    
T  96159 taatacatcatttggtccattaacttattttcgattttcaatttggtcccctaactataaagtgtctcaatt 96230  T

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Target: scaffold0687 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0687
Description:

Target: scaffold0687; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 261 - 322
Target Start/End: Complemental strand, 6671 - 6610
Alignment:
Q  261 tttagtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    |||||| | |||| ||| ||||| ||||||||||||||| |||| |||||||||| ||||||    
T  6671 tttagttccttaaattatttttgattttcattttggtcctctaattataaaatgtctcaatt 6610  T

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Target: scaffold0630 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0630
Description:

Target: scaffold0630; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 265 - 322
Target Start/End: Complemental strand, 3155 - 3098
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    ||||||||||||| |||||  ||||||||||||||| ||||| |||| ||| ||||||    
T  3155 gtcctttaacttatttttgaatttcattttggtcccttaactttaaactgtctcaatt 3098  T

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Target: scaffold0177 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 265 - 322
Target Start/End: Original strand, 1768 - 1825
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    |||| |||||||| ||| || ||||||||||||||||||| |||||| ||| ||||||    
T  1768 gtcccttaacttattttcggatttcattttggtcccctaattataaagtgtctcaatt 1825  T

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Target: scaffold0155 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 265 - 322
Target Start/End: Original strand, 5182 - 5239
Alignment:
Q  265 gtcctttaacttacttttggttttcattttggtcccctaactataaaatgtttcaatt 322  Q
    |||| |||||||| |||||| |||  ||||||||||||||||||||| ||| ||||||    
T  5182 gtcccttaacttatttttggattttcttttggtcccctaactataaagtgtctcaatt 5239  T

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Target: scaffold0007 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 270 - 370
Target Start/End: Complemental strand, 145967 - 145866
Alignment:
Q  270 ttaacttacttttggttttcattttggtcccctaactataaaatgt-ttcaattggtcttataaatattttgtcgtttaccgttttggtcctctccatta 368  Q
    |||| ||| |||||||||||| |||  ||||||||||||||||||| || | ||||||  |||||| || || |||||||  |||||||| ||||| |||    
T  145967 ttaatttatttttggttttcaatttaatcccctaactataaaatgtcttaatttggtccaataaatcttatgccgtttactattttggtcatctccgtta 145868  T
Q  369 at 370  Q
    ||    
T  145867 at 145866  T

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