View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11245_high_1 (Length: 862)

Name: NF11245_high_1
Description: NF11245
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11245_high_1
NF11245_high_1
[»] chr6 (32 HSPs)
chr6 (15-328)||(1703287-1703612)
chr6 (397-583)||(1703678-1703864)
chr6 (654-847)||(1703935-1704122)
chr6 (666-818)||(17334888-17335041)
chr6 (666-823)||(4984356-4984514)
chr6 (666-823)||(17237075-17237233)
chr6 (666-823)||(35001720-35001878)
chr6 (671-818)||(16892610-16892758)
chr6 (666-823)||(8027907-8028065)
chr6 (666-823)||(12059562-12059720)
chr6 (666-823)||(12653074-12653232)
chr6 (701-797)||(20226001-20226097)
chr6 (701-797)||(22119985-22120081)
chr6 (696-823)||(33110741-33110869)
chr6 (665-844)||(8196195-8196376)
chr6 (666-808)||(25064381-25064524)
chr6 (666-823)||(4088590-4088748)
chr6 (666-850)||(16419260-16419446)
chr6 (666-850)||(7975994-7976180)
chr6 (666-818)||(8497102-8497256)
chr6 (702-797)||(30608360-30608455)
chr6 (665-823)||(33740366-33740525)
chr6 (742-804)||(3688715-3688777)
chr6 (666-823)||(28634902-28635060)
chr6 (753-823)||(30879614-30879684)
chr6 (756-802)||(31852092-31852138)
chr6 (666-719)||(7875833-7875886)
chr6 (753-797)||(67897-67941)
chr6 (753-844)||(33053064-33053155)
chr6 (666-719)||(7880891-7880944)
chr6 (666-719)||(34489436-34489489)
chr6 (765-810)||(35086249-35086294)
[»] chr7 (39 HSPs)
chr7 (653-846)||(43369550-43369743)
chr7 (666-823)||(7640564-7640722)
chr7 (666-818)||(34773846-34773999)
chr7 (666-823)||(26583839-26583998)
chr7 (739-850)||(30756701-30756812)
chr7 (666-823)||(433480-433638)
chr7 (666-818)||(2843030-2843183)
chr7 (666-817)||(20083474-20083626)
chr7 (744-797)||(9977097-9977150)
chr7 (666-818)||(26492500-26492653)
chr7 (666-834)||(35261416-35261585)
chr7 (738-797)||(13796810-13796869)
chr7 (702-797)||(28407763-28407858)
chr7 (666-797)||(34899413-34899547)
chr7 (702-797)||(47590462-47590557)
chr7 (665-763)||(6002218-6002316)
chr7 (666-823)||(23085651-23085809)
chr7 (666-823)||(23786705-23786863)
chr7 (666-823)||(32684798-32684956)
chr7 (666-823)||(45198822-45198980)
chr7 (666-818)||(20116717-20116869)
chr7 (666-822)||(46822146-46822303)
chr7 (753-797)||(8001442-8001486)
chr7 (702-834)||(19404602-19404734)
chr7 (753-797)||(28044652-28044696)
chr7 (668-788)||(36143910-36144030)
chr7 (754-810)||(46244149-46244205)
chr7 (753-797)||(48316708-48316752)
chr7 (765-824)||(4999937-4999996)
chr7 (666-725)||(23425162-23425221)
chr7 (738-793)||(25255382-25255437)
chr7 (666-797)||(40993308-40993442)
chr7 (666-716)||(17611629-17611679)
chr7 (665-719)||(21609457-21609511)
chr7 (666-823)||(42066851-42067009)
chr7 (666-719)||(1485045-1485098)
chr7 (700-793)||(11343964-11344057)
chr7 (672-844)||(13592305-13592477)
chr7 (790-823)||(14627793-14627826)
[»] chr4 (50 HSPs)
chr4 (671-844)||(36184653-36184826)
chr4 (666-823)||(9528666-9528824)
chr4 (666-823)||(25274025-25274183)
chr4 (666-823)||(38706499-38706657)
chr4 (665-817)||(4821064-4821217)
chr4 (666-818)||(50766301-50766454)
chr4 (666-817)||(12265610-12265761)
chr4 (672-823)||(44947554-44947706)
chr4 (744-819)||(49072632-49072707)
chr4 (666-823)||(4644000-4644158)
chr4 (666-823)||(51318127-51318285)
chr4 (666-809)||(46990920-46991064)
chr4 (666-808)||(1532065-1532208)
chr4 (666-824)||(10359338-10359496)
chr4 (680-834)||(21090273-21090428)
chr4 (705-796)||(27652113-27652204)
chr4 (671-823)||(37188389-37188542)
chr4 (700-797)||(42032372-42032469)
chr4 (666-822)||(43444535-43444692)
chr4 (671-850)||(35964770-35964950)
chr4 (747-810)||(26123416-26123479)
chr4 (664-805)||(3335951-3336093)
chr4 (665-818)||(9645312-9645466)
chr4 (666-823)||(34024227-34024385)
chr4 (666-844)||(43153806-43153983)
chr4 (744-846)||(43318153-43318255)
chr4 (666-823)||(45227830-45227988)
chr4 (666-822)||(9284054-9284211)
chr4 (753-850)||(19853408-19853505)
chr4 (665-770)||(29966522-29966627)
chr4 (666-818)||(53616439-53616592)
chr4 (753-850)||(53811144-53811241)
chr4 (753-797)||(6155119-6155163)
chr4 (753-797)||(9178522-9178566)
chr4 (671-818)||(47417809-47417957)
chr4 (753-797)||(56040542-56040586)
chr4 (739-802)||(7008871-7008934)
chr4 (785-844)||(28834159-28834218)
chr4 (754-797)||(29120276-29120319)
chr4 (666-828)||(52097705-52097868)
chr4 (747-797)||(22305511-22305561)
chr4 (673-719)||(31381512-31381558)
chr4 (738-796)||(36194878-36194936)
chr4 (735-797)||(37684026-37684088)
chr4 (755-797)||(45418681-45418723)
chr4 (665-719)||(49680777-49680831)
chr4 (666-719)||(20569504-20569557)
chr4 (680-805)||(21364950-21365075)
chr4 (700-793)||(31891130-31891223)
chr4 (667-823)||(56199238-56199395)
[»] chr8 (48 HSPs)
chr8 (673-844)||(33298970-33299142)
chr8 (690-846)||(27746928-27747084)
chr8 (675-826)||(8441319-8441470)
chr8 (666-808)||(44099725-44099868)
chr8 (666-818)||(4809106-4809259)
chr8 (672-818)||(2656012-2656159)
chr8 (702-797)||(28086655-28086750)
chr8 (738-797)||(29617153-29617212)
chr8 (738-797)||(34609987-34610046)
chr8 (666-823)||(32724270-32724428)
chr8 (666-818)||(14906712-14906865)
chr8 (666-719)||(19876440-19876493)
chr8 (666-719)||(28240083-28240136)
chr8 (666-818)||(43889913-43890066)
chr8 (672-807)||(23851289-23851425)
chr8 (741-797)||(25238475-25238531)
chr8 (666-824)||(33342570-33342728)
chr8 (673-818)||(11464313-11464459)
chr8 (666-823)||(11725817-11725975)
chr8 (666-823)||(29777356-29777514)
chr8 (666-797)||(15344459-15344594)
chr8 (666-797)||(15433524-15433659)
chr8 (666-797)||(15524828-15524963)
chr8 (666-719)||(17427014-17427067)
chr8 (666-719)||(17430664-17430717)
chr8 (753-850)||(31013502-31013599)
chr8 (666-763)||(33896284-33896381)
chr8 (666-818)||(34611946-34612099)
chr8 (753-797)||(9637303-9637347)
chr8 (753-797)||(18890593-18890637)
chr8 (753-797)||(23230794-23230838)
chr8 (753-797)||(27110359-27110403)
chr8 (702-817)||(24186504-24186619)
chr8 (768-823)||(35812797-35812852)
chr8 (753-796)||(41896669-41896712)
chr8 (753-859)||(20553135-20553241)
chr8 (664-719)||(21238017-21238074)
chr8 (738-823)||(42447888-42447974)
chr8 (738-823)||(44578167-44578253)
chr8 (731-844)||(3673545-3673658)
chr8 (666-719)||(9072960-9073013)
chr8 (666-763)||(9619146-9619243)
chr8 (753-850)||(10377787-10377884)
chr8 (686-763)||(11197081-11197158)
chr8 (744-797)||(29939451-29939504)
chr8 (666-818)||(37565668-37565821)
chr8 (688-844)||(43192158-43192315)
chr8 (700-797)||(43833837-43833934)
[»] chr2 (45 HSPs)
chr2 (666-823)||(27949560-27949718)
chr2 (666-823)||(8806000-8806158)
chr2 (666-824)||(30923264-30923422)
chr2 (666-823)||(21570197-21570355)
chr2 (666-822)||(15690537-15690694)
chr2 (666-817)||(9986131-9986283)
chr2 (666-844)||(41712578-41712758)
chr2 (666-850)||(20046871-20047057)
chr2 (738-797)||(4904027-4904086)
chr2 (721-796)||(7604336-7604411)
chr2 (672-810)||(10548333-10548470)
chr2 (666-807)||(41431178-41431320)
chr2 (699-797)||(41694780-41694877)
chr2 (700-797)||(17248991-17249088)
chr2 (666-763)||(40625846-40625943)
chr2 (666-823)||(4228256-4228415)
chr2 (672-818)||(8971423-8971570)
chr2 (731-850)||(10929771-10929890)
chr2 (702-797)||(11985079-11985174)
chr2 (731-797)||(1421835-1421901)
chr2 (667-850)||(83971-84156)
chr2 (753-850)||(7646584-7646681)
chr2 (753-834)||(22538204-22538285)
chr2 (666-818)||(27248940-27249093)
chr2 (667-788)||(39284354-39284475)
chr2 (700-796)||(10237060-10237156)
chr2 (774-850)||(13141591-13141667)
chr2 (786-826)||(34124582-34124622)
chr2 (702-797)||(7677719-7677814)
chr2 (666-725)||(13718959-13719018)
chr2 (653-796)||(24461603-24461745)
chr2 (738-797)||(28533836-28533895)
chr2 (738-797)||(32448498-32448557)
chr2 (753-823)||(33229016-33229087)
chr2 (666-823)||(7015500-7015658)
chr2 (700-797)||(19597998-19598095)
chr2 (731-769)||(32190851-32190889)
chr2 (699-797)||(33760036-33760134)
chr2 (666-715)||(8308338-8308387)
chr2 (738-783)||(8809452-8809497)
chr2 (680-805)||(23903494-23903619)
chr2 (666-763)||(30420864-30420961)
chr2 (702-859)||(31788553-31788710)
chr2 (666-719)||(36234237-36234290)
chr2 (666-818)||(38575275-38575427)
[»] scaffold0136 (1 HSPs)
scaffold0136 (676-815)||(34581-34720)
[»] chr1 (42 HSPs)
chr1 (666-817)||(5856041-5856192)
chr1 (666-844)||(38520324-38520503)
chr1 (666-823)||(9686994-9687152)
chr1 (666-823)||(45425855-45426013)
chr1 (665-822)||(50271928-50272086)
chr1 (666-818)||(19715684-19715837)
chr1 (666-823)||(51871997-51872155)
chr1 (667-823)||(5324349-5324505)
chr1 (666-796)||(47133056-47133188)
chr1 (706-797)||(31919141-31919232)
chr1 (673-818)||(50148509-50148655)
chr1 (666-807)||(50165888-50166030)
chr1 (666-823)||(51868434-51868592)
chr1 (666-807)||(799641-799780)
chr1 (666-818)||(9172629-9172782)
chr1 (666-818)||(9180611-9180764)
chr1 (666-763)||(11454132-11454229)
chr1 (666-818)||(11709496-11709649)
chr1 (666-818)||(33291207-33291360)
chr1 (675-818)||(5701398-5701542)
chr1 (702-797)||(15431511-15431606)
chr1 (753-812)||(46399107-46399166)
chr1 (666-823)||(7342856-7343014)
chr1 (666-797)||(19061061-19061194)
chr1 (666-807)||(19723463-19723605)
chr1 (666-815)||(20266444-20266594)
chr1 (666-823)||(25406073-25406231)
chr1 (735-797)||(39888334-39888396)
chr1 (766-824)||(48809127-48809185)
chr1 (702-783)||(27456650-27456731)
chr1 (666-719)||(39987657-39987710)
chr1 (753-797)||(5983988-5984032)
chr1 (700-796)||(36775553-36775649)
chr1 (702-797)||(16989523-16989618)
chr1 (698-807)||(19052155-19052264)
chr1 (765-819)||(45393267-45393321)
chr1 (698-822)||(7997924-7998049)
chr1 (729-810)||(19885150-19885231)
chr1 (765-850)||(21947526-21947611)
chr1 (666-719)||(30879314-30879367)
chr1 (756-809)||(32873763-32873816)
chr1 (700-797)||(49627065-49627162)
[»] chr5 (39 HSPs)
chr5 (666-823)||(781520-781678)
chr5 (665-844)||(11192480-11192659)
chr5 (673-823)||(27266655-27266806)
chr5 (765-823)||(19100527-19100585)
chr5 (666-823)||(19259601-19259759)
chr5 (666-823)||(34881850-34882007)
chr5 (666-823)||(35475127-35475285)
chr5 (666-823)||(42580020-42580178)
chr5 (666-817)||(15571045-15571197)
chr5 (666-817)||(20257485-20257637)
chr5 (667-815)||(24549506-24549654)
chr5 (702-850)||(34945488-34945636)
chr5 (709-797)||(37985965-37986053)
chr5 (738-797)||(41630650-41630709)
chr5 (666-823)||(4954124-4954282)
chr5 (666-823)||(7247091-7247249)
chr5 (696-797)||(28097307-28097408)
chr5 (672-823)||(3271197-3271349)
chr5 (702-850)||(38597892-38598040)
chr5 (666-807)||(7241932-7242074)
chr5 (666-823)||(18677255-18677412)
chr5 (666-823)||(21060072-21060230)
chr5 (731-793)||(32691109-32691171)
chr5 (666-823)||(43148859-43149017)
chr5 (696-804)||(7612877-7612986)
chr5 (753-802)||(31078315-31078364)
chr5 (771-816)||(31802367-31802412)
chr5 (671-716)||(37483287-37483332)
chr5 (666-850)||(13007324-13007511)
chr5 (753-797)||(14082292-14082336)
chr5 (753-844)||(15571587-15571679)
chr5 (753-816)||(9762349-9762412)
chr5 (660-810)||(11768144-11768295)
chr5 (666-823)||(30298976-30299134)
chr5 (665-763)||(43008103-43008201)
chr5 (753-810)||(8514548-8514605)
chr5 (666-763)||(8771970-8772067)
chr5 (666-719)||(27752162-27752215)
chr5 (731-844)||(35920870-35920983)
[»] chr3 (37 HSPs)
chr3 (653-796)||(35175553-35175698)
chr3 (653-809)||(22803171-22803328)
chr3 (666-818)||(25162568-25162721)
chr3 (653-823)||(30648495-30648666)
chr3 (666-818)||(36906254-36906407)
chr3 (666-844)||(25631315-25631495)
chr3 (702-797)||(43017036-43017131)
chr3 (666-820)||(44907188-44907343)
chr3 (666-818)||(3848708-3848861)
chr3 (666-818)||(12116230-12116383)
chr3 (742-810)||(19862213-19862281)
chr3 (666-823)||(46934769-46934924)
chr3 (666-850)||(628730-628916)
chr3 (666-725)||(6823413-6823472)
chr3 (673-823)||(39917195-39917345)
chr3 (702-797)||(44959818-44959913)
chr3 (702-847)||(4711580-4711725)
chr3 (666-818)||(17237937-17238090)
chr3 (666-822)||(32607597-32607754)
chr3 (666-779)||(35498989-35499102)
chr3 (666-796)||(50194142-50194274)
chr3 (753-797)||(9797430-9797474)
chr3 (700-796)||(16235575-16235671)
chr3 (706-797)||(19619861-19619952)
chr3 (702-797)||(21533654-21533749)
chr3 (753-796)||(27706122-27706165)
chr3 (713-796)||(42455676-42455759)
chr3 (702-797)||(45568290-45568385)
chr3 (765-844)||(46322223-46322302)
chr3 (680-763)||(51628951-51629034)
chr3 (702-796)||(7448759-7448853)
chr3 (702-796)||(7456901-7456995)
chr3 (753-823)||(26275715-26275785)
chr3 (666-719)||(38440380-38440433)
chr3 (672-844)||(46178674-46178847)
chr3 (732-813)||(47176038-47176119)
chr3 (700-797)||(53807701-53807798)
[»] scaffold0003 (1 HSPs)
scaffold0003 (666-850)||(361588-361774)
[»] scaffold0009 (1 HSPs)
scaffold0009 (666-796)||(57895-58027)
[»] scaffold0113 (1 HSPs)
scaffold0113 (673-725)||(36486-36538)
[»] scaffold0445 (1 HSPs)
scaffold0445 (702-797)||(1493-1588)
[»] scaffold0049 (1 HSPs)
scaffold0049 (702-793)||(71145-71236)
[»] scaffold0039 (1 HSPs)
scaffold0039 (666-804)||(53207-53345)
[»] scaffold0146 (1 HSPs)
scaffold0146 (666-818)||(16109-16262)
[»] scaffold0050 (1 HSPs)
scaffold0050 (753-797)||(65938-65982)
[»] scaffold0347 (1 HSPs)
scaffold0347 (731-797)||(6179-6245)
[»] scaffold0443 (1 HSPs)
scaffold0443 (666-719)||(4440-4493)
[»] scaffold0372 (1 HSPs)
scaffold0372 (680-805)||(9474-9599)
[»] scaffold0088 (1 HSPs)
scaffold0088 (753-850)||(50872-50969)
[»] scaffold0022 (1 HSPs)
scaffold0022 (666-763)||(83226-83322)
[»] scaffold0017 (1 HSPs)
scaffold0017 (738-859)||(32628-32749)


Alignment Details
Target: chr6 (Bit Score: 250; Significance: 1e-138; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 250; E-Value: 1e-138
Query Start/End: Original strand, 15 - 328
Target Start/End: Original strand, 1703287 - 1703612
Alignment:
Q  15 aatatggatgaaaaacagagaaagaagtttacgctggtgagaaaaacaagccaaaagagatgacattgcctgcaacaacaaaaaa-tagagcaaaaatta 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  1703287 aatatggatgaaaaacagagaaagaagtttacgctggtgagaaaaacaagccaaaagagatgacattgcctgcaacaacaaaaaaatagagcaaaaatta 1703386  T
Q  114 ttact----------aataacaacattttatgtgaaatgaatcaaactatacacgttggagtattgttttaattttattataannnnnnn-caattttca 202  Q
    |||||          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||    
T  1703387 ttactctaataacataataacaacattttatgtgaaatgaatcaaactatacacgttggagtattgttttaattttattataattttttttcaattttca 1703486  T
Q  203 tgcaaaaactaatatgaaaagtatagtaaaaagacattgagatgaaagtgaaacacaaacctatggcaccaacaacgttacgagctaatttggctgtcac 302  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1703487 tgcaaaaactaatatgaaaagtatagtaaaaaaacattgagatgaaagtgaaacacaaacctatggcaccaacaacgttacgagctaatttggctgtcac 1703586  T
Q  303 aaccatgttggaaatttttgttctgc 328  Q
    ||||||||||||||||||||||||||    
T  1703587 aaccatgttggaaatttttgttctgc 1703612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 179; E-Value: 4e-96
Query Start/End: Original strand, 397 - 583
Target Start/End: Original strand, 1703678 - 1703864
Alignment:
Q  397 gaccagaatgcacaaactttgaagcagagaccttatttaatgttattaatttcgtaaatataataaatttattatttatcctgttatggtgaaatctatt 496  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  1703678 gaccagaatgcacaaactttgaagcagagaccttatttaatgttattaatttcgtaaatataataaatttattatttatccttttatggtgaaatctatt 1703777  T
Q  497 ttcaggtcaaaggtgtttatcttttttccctctttataaatatgtctaggaaatcaataaaagtaatgtacagtgcatcattatctg 583  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  1703778 ttcaggtcaaaggtgtttatcttttttccctctttataaatatgtctaggaaatcaatataagtaatgtacagtgcatcattatctg 1703864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 155; E-Value: 8e-82
Query Start/End: Original strand, 654 - 847
Target Start/End: Original strand, 1703935 - 1704122
Alignment:
Q  654 aaaattaaatcaatatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacattta 753  Q
    ||||||||| |||||||||||||||      ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1703935 aaaattaaaacaatatttattcatt------gattgattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacattta 1704028  T
Q  754 agttaatagcgtacaacgacaaaatgtctataaataatatgatacaattaaagtgactggaatattcatgcatccgtatctataacgttgatgt 847  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||    
T  1704029 agttaatagcgtacaacgacaaaatgtctataaataatatgatacaattaaagtgactggaatattcatgcatccggatctacaacgttgatgt 1704122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 666 - 818
Target Start/End: Complemental strand, 17335041 - 17334888
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgt 765  Q
    ||||| ||||||| |||| || ||||||| |||||||||| ||||||||||||| ||||| | | ||| || ||||| |||||||  ||||||||||| |    
T  17335041 atattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaatgatgaatctgcgaacaaactcacaacatccaagttaatagcat 17334942  T
Q  766 acaacgacaaaatgtctataaata-atatgatacaattaaagtgactggaatat 818  Q
    | |||| || |||| ||| ||| | |||||||  ||||||||||||||||||||    
T  17334941 ataacggcataatgcctacaaaaatatatgatgaaattaaagtgactggaatat 17334888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 666 - 823
Target Start/End: Original strand, 4984356 - 4984514
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgt 765  Q
    ||||| ||||||| |||| || ||||||| |||||||||| ||||||||||||| | ||| | | ||| || ||||||||| ||| |||||||||||| |    
T  4984356 atattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaacttacatcatctaagttaatagcat 4984455  T
Q  766 acaacgacaaaatgtctataaata-atatgatacaattaaagtgactggaatattcatg 823  Q
    | ||| ||| |||| ||| ||| | |||||||| |||||||||||  ||||||| ||||    
T  4984456 ataacaacataatgcctacaaaaatatatgataaaattaaagtgatcggaatatccatg 4984514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 666 - 823
Target Start/End: Original strand, 17237075 - 17237233
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgt 765  Q
    ||||| ||||||| |||| || ||||||| |||||||||| ||||||||||||| | ||| | | ||| || | ||| |||||||  ||||||||||| |    
T  17237075 atattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacacactcacaacatccaagttaatagcat 17237174  T
Q  766 acaacgacaaaatgtctataaata-atatgatacaattaaagtgactggaatattcatg 823  Q
    | ||||||| |||| ||| ||| | |||||||| |||||||||||| ||||||| ||||    
T  17237175 ataacgacataatgcctacaaaaatatatgataaaattaaagtgaccggaatatccatg 17237233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 666 - 823
Target Start/End: Complemental strand, 35001878 - 35001720
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgt 765  Q
    ||||| ||||||| ||||  | ||||||| |||||||||||||||||||||||| | ||| | | ||| || ||||| |||||||  ||||||||||| |    
T  35001878 atattcattcattcaaatcaaaagattacatcattcaacatcgctaaaaacgtaaaggattaatctgcgaacaaactcacaacatccaagttaatagcat 35001779  T
Q  766 acaacgacaaaatgtctataaata-atatgatacaattaaagtgactggaatattcatg 823  Q
    | |||| || |||| ||| ||| | |||||||| ||||||||| || ||||||||||||    
T  35001778 ataacggcataatgcctacaaaaatatatgataaaattaaagtcaccggaatattcatg 35001720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 671 - 818
Target Start/End: Original strand, 16892610 - 16892758
Alignment:
Q  671 tattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgtacaac 770  Q
    |||||||| |||| || ||||||| |||||||||| | ||||||||||| ||||| ||| ||| || |||||||| ||||  ||||||||||| || |||    
T  16892610 tattcattcaaatcgagagattacatcattcaacaccactaaaaacgtaaatgatgattctgcgaacaaacttacgacatccaagttaatagcatataac 16892709  T
Q  771 gacaaaatgtctataaata-atatgatacaattaaagtgactggaatat 818  Q
    | || |||| ||| ||| | |||||||  |||||||||||| |||||||    
T  16892710 ggcataatgcctacaaaaatatatgatgaaattaaagtgaccggaatat 16892758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 666 - 823
Target Start/End: Original strand, 8027907 - 8028065
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgt 765  Q
    ||||| ||||||| |||| || ||||||| | |||||||| ||||||||||||| | ||| | ||||| || ||||| ||| |||  ||||||||||| |    
T  8027907 atattcattcattcaaatcgagagattacattattcaacaccgctaaaaacgtaaaggatgaatttgcgaacaaactcacatcatcaaagttaatagcat 8028006  T
Q  766 acaacgacaaaatgtctataaata-atatgatacaattaaagtgactggaatattcatg 823  Q
    | || | || |||| ||| ||| | |||||||| |||||||||||||||||||| ||||    
T  8028007 ataatggcataatgcctacaaaaatatatgataaaattaaagtgactggaatatccatg 8028065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 666 - 823
Target Start/End: Original strand, 12059562 - 12059720
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgt 765  Q
    ||||| ||||||||||||  | ||||||  |||||||||| ||||||||||||| | ||| | | ||| || ||||| |||||||  ||||||||||| |    
T  12059562 atattcattcatttaaatcaagagattatatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaactcacaacatccaagttaatagcat 12059661  T
Q  766 acaacgacaaaatgtcta-taaataatatgatacaattaaagtgactggaatattcatg 823  Q
    | ||||||| |||  |||  ||| ||||||||| |||||||||||| ||||||| ||||    
T  12059662 ataacgacataattcctacaaaaaaatatgataaaattaaagtgaccggaatatccatg 12059720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 666 - 823
Target Start/End: Complemental strand, 12653232 - 12653074
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgt 765  Q
    ||||| |||||||||||| || ||||||| |||||||||| ||||||||||||| | ||| | | ||| || ||||| |||||||  ||||||||||| |    
T  12653232 atattcattcatttaaatcgagagattacatcattcaacaccgctaaaaacgtacaggatgaatctgcgaacaaactcacaacatccaagttaatagcat 12653133  T
Q  766 acaacgacaaaatgtctataaata-atatgatacaattaaagtgactggaatattcatg 823  Q
    | |||| || ||||  || ||| | |||||||| |||||||| ||| ||||||| ||||    
T  12653132 ataacggcataatgcgtacaaaaatatatgataaaattaaagcgaccggaatatccatg 12653074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 701 - 797
Target Start/End: Complemental strand, 20226097 - 20226001
Alignment:
Q  701 caacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgtacaacgacaaaatgtctataaataatatgata 797  Q
    |||||||||||||||| || ||||| | ||||| || ||||| |||| |   ||||||||||| ||||||||||||||| ||| |||||||||||||    
T  20226097 caacatcgctaaaaacataaatgatgaatttgcgaacaaactcacaatacccaagttaatagcatacaacgacaaaatgcctacaaataatatgata 20226001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 701 - 797
Target Start/End: Complemental strand, 22120081 - 22119985
Alignment:
Q  701 caacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgtacaacgacaaaatgtctataaataatatgata 797  Q
    |||||||||||||||| || ||||| | ||||| || ||||| |||| |   ||||||||||| ||||||||||||||| ||| |||||||||||||    
T  22120081 caacatcgctaaaaacataaatgatgaatttgcgaacaaactcacaatacccaagttaatagcatacaacgacaaaatgcctacaaataatatgata 22119985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 696 - 823
Target Start/End: Complemental strand, 33110869 - 33110741
Alignment:
Q  696 tcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgtacaacgacaaaatgtctataaata-atatg 794  Q
    ||||||||||  || ||||||||| | ||| | | |||||||||||| |||||||  ||||||||||| || ||||||| |||| ||| ||| | |||||    
T  33110869 tcattcaacactgccaaaaacgtaaaggatgaatatgcaaataaactcacaacatccaagttaatagcatataacgacataatgcctacaaaaatatatg 33110770  T
Q  795 atacaattaaagtgactggaatattcatg 823  Q
    ||| |||||||||||| ||||||| ||||    
T  33110769 ataaaattaaagtgaccggaatatccatg 33110741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 665 - 844
Target Start/End: Original strand, 8196195 - 8196376
Alignment:
Q  665 aatatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcg 764  Q
    |||||| ||||||| |||| || ||||||| |||||||||| ||||||||| ||| | ||| | ||||| || | ||| ||| |||  |||||||||||     
T  8196195 aatattcattcattcaaatcgagagattacatcattcaacaccgctaaaaatgtaaaggatgaatttgcgaacacactcacagcatccaagttaatagca 8196294  T
Q  765 tacaacgacaaaatgtctataaataatat--gatacaattaaagtgactggaatattcat-gcatccgtatctataacgttga 844  Q
    || ||||||| |||| ||| ||| |||||  |||| |||||||||||| ||||||| ||| || |||| ||||| ||||||||    
T  8196295 tataacgacataatgcctacaaa-aatatgcgataaaattaaagtgaccggaatatacatggcctccggatctacaacgttga 8196376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 666 - 808
Target Start/End: Complemental strand, 25064524 - 25064381
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgt 765  Q
    ||||| ||||||| |||| || ||||||| |||||||||| ||||||||||||| | ||| | | ||| || ||||| |||||||  ||||||||||| |    
T  25064524 atattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaactcacaacatccaagttaatagcat 25064425  T
Q  766 acaacgacaaaatgtctataaata-atatgatacaattaaagtg 808  Q
    | ||||||| |||| ||| ||| | |||||||  ||||||||||    
T  25064424 ataacgacataatgcctacaaaaatatatgatgaaattaaagtg 25064381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 666 - 823
Target Start/End: Complemental strand, 4088748 - 4088590
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgt 765  Q
    ||||| ||||||| ||||||| ||||||  |||||||||| ||||||||||||| | ||| | | ||| || ||||| ||| |||  |||||||| || |    
T  4088748 atattcattcattcaaattgagagattatttcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaactcacagcatccaagttaatggcat 4088649  T
Q  766 acaacgacaaaatgtctataaata-atatgatacaattaaagtgactggaatattcatg 823  Q
    | |||| || |||| ||| ||| | |||||||| |||||||||||| ||||||| ||||    
T  4088648 ataacggcataatgcctacaaaaatatatgataaaattaaagtgaccggaatatccatg 4088590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 666 - 850
Target Start/End: Complemental strand, 16419446 - 16419260
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgt 765  Q
    ||||| ||| ||| ||||||| ||||||| |||||||||| ||||||||||||| | ||| | | ||| || ||||| |||||| | ||||||||||| |    
T  16419446 atattcatttattcaaattgagagattacatcattcaacaccgctaaaaacgtaaaagatgaatctgcgaacaaactcacaacaatcaagttaatagcat 16419347  T
Q  766 acaacgacaaaatgtctataaata-atatgatacaattaaagtgactggaatattca-tgcatccgtatctataacgttgatgtcca 850  Q
    |  ||| || |||| ||| ||| | |||||||| ||||||||| || ||||||| || ||| |||| ||||  |||||||| |||||    
T  16419346 atgacggcataatgcctacaaaaatatatgataaaattaaagtcaccggaatatccattgcctccggatctgcaacgttgacgtcca 16419260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 666 - 850
Target Start/End: Original strand, 7975994 - 7976180
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcat--tcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagc 763  Q
    ||||| ||||||||||||||||||| ||| |||   ||||||| ||||||||| || | ||| | | ||| || ||||| ||||||  ||||||||||||    
T  7975994 atattcattcatttaaattgatagaatacatcagaatcaacattgctaaaaacataaaggatgaatatgcgaacaaactcacaacacctaagttaatagc 7976093  T
Q  764 gtacaacgacaaaatgtctataaataatatgatacaattaaagtgactggaatattcatgcatccgtatctataacgttgatgtcca 850  Q
     ||||||| ||||||| ||| |||   ||||||| |||| || | ||  |||||  ||||| |||| ||||| |||||||| |||||    
T  7976094 atacaacggcaaaatgcctacaaacggtatgataaaatttaaatcaccagaatacccatgcttccggatctacaacgttgacgtcca 7976180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 666 - 818
Target Start/End: Complemental strand, 8497256 - 8497102
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgt 765  Q
    ||||| ||||||| |||| || ||||||| |||||||||| ||||||||||||| | ||| | | ||| || ||||| ||| |||  ||||||||||| |    
T  8497256 atattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaactcacagcatccaagttaatagcat 8497157  T
Q  766 acaacgacaaaatgtctataaata--atatgatacaattaaagtgactggaatat 818  Q
    | |||| || |||| ||| ||| |  |||||||  |||||||||||| |||||||    
T  8497156 ataacggcataatgcctacaaaaaatatatgatgaaattaaagtgaccggaatat 8497102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 702 - 797
Target Start/End: Original strand, 30608360 - 30608455
Alignment:
Q  702 aacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgtacaacgacaaaatgtctataaataatatgata 797  Q
    ||||||| |||||||||| | ||| | |||||||| || || |||||||  ||||||||||| |||||||  |||||| ||| |||||||||||||    
T  30608360 aacatcgttaaaaacgtaaaggatgaatttgcaaacaatctcacaacatccaagttaatagcatacaacggtaaaatgcctacaaataatatgata 30608455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 665 - 823
Target Start/End: Original strand, 33740366 - 33740525
Alignment:
Q  665 aatatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcg 764  Q
    |||||| ||||||||||||  | ||||||| ||||||||||  |||||||||||| | ||| | | ||| || ||||| |||  ||  |||||||||||     
T  33740366 aatattcattcatttaaatcaagagattacatcattcaacactgctaaaaacgtaaaggatgaatctgcgaacaaactcacattatccaagttaatagca 33740465  T
Q  765 tacaacgacaaaatgtctataaata-atatgatacaattaaagtgactggaatattcatg 823  Q
    || |||| || |||| ||||||| | |||||||| |||||||||||| | ||||| ||||    
T  33740466 tataacggcataatgcctataaaaatatatgataaaattaaagtgaccgaaatatccatg 33740525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 742 - 804
Target Start/End: Original strand, 3688715 - 3688777
Alignment:
Q  742 ttacaacatttaagttaatagcgtacaacgacaaaatgtctataaataatatgatacaattaa 804  Q
    |||||||||||||| ||||||| |||||||  ||||| |||||||||||||||| | ||||||    
T  3688715 ttacaacatttaagataatagcatacaacggtaaaatatctataaataatatgacaaaattaa 3688777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 666 - 823
Target Start/End: Original strand, 28634902 - 28635060
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgt 765  Q
    ||||| ||||||| |||| ||||| |||| |||||||||||||||||||||||| | ||| | | ||  || ||||| |||||||  |||||||| || |    
T  28634902 atattcattcattcaaatcgataggttacatcattcaacatcgctaaaaacgtaaaggatgaatctgtgaacaaactcacaacatccaagttaatcgcat 28635001  T
Q  766 acaacgacaaaatgtctataaata-atatgatacaattaaagtgactggaatattcatg 823  Q
    | |||| || |||| ||| ||| | | |||||| |||||||||||| ||| ||| ||||    
T  28635002 ataacggcataatgcctacaaaaatacatgataaaattaaagtgaccggagtatccatg 28635060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 753 - 823
Target Start/End: Original strand, 30879614 - 30879684
Alignment:
Q  753 aagttaatagcgtacaacgacaaaatgtctataaataatatgatacaattaaagtgactggaatattcatg 823  Q
    ||||||||| | || |||||||||||  | ||||||||||||||| ||||||| ||||| |||||||||||    
T  30879614 aagttaataacatataacgacaaaataccaataaataatatgataaaattaaaatgacttgaatattcatg 30879684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 756 - 802
Target Start/End: Original strand, 31852092 - 31852138
Alignment:
Q  756 ttaatagcgtacaacgacaaaatgtctataaataatatgatacaatt 802  Q
    |||||||| |||||| |||||||||||||||||||||||||| ||||    
T  31852092 ttaatagcatacaacaacaaaatgtctataaataatatgataaaatt 31852138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 666 - 719
Target Start/End: Original strand, 7875833 - 7875886
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgta 719  Q
    ||||| |||||||||||| || ||||||| |||||||||| |||||||||||||    
T  7875833 atattcattcatttaaatcgagagattacatcattcaacaccgctaaaaacgta 7875886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 753 - 797
Target Start/End: Original strand, 67897 - 67941
Alignment:
Q  753 aagttaatagcgtacaacgacaaaatgtctataaataatatgata 797  Q
    ||||||||||| ||||||| ||||||| |||||||||||||||||    
T  67897 aagttaatagcatacaacggcaaaatgcctataaataatatgata 67941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 753 - 844
Target Start/End: Original strand, 33053064 - 33053155
Alignment:
Q  753 aagttaatagcgtacaacgacaaaatgtctataaataatatgatacaattaaagtgactggaatattcatgcatccgtatctataacgttga 844  Q
    ||||||||||| ||||||| ||||||| ||| ||||||||||||| || | |||| |||| ||||  ||||| |||| ||||  ||||||||    
T  33053064 aagttaatagcatacaacggcaaaatgcctacaaataatatgataaaacttaagtcactgaaatacccatgcttccggatctgcaacgttga 33053155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 666 - 719
Target Start/End: Original strand, 7880891 - 7880944
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgta 719  Q
    ||||| ||||||| |||| || ||||||| |||||||||| |||||||||||||    
T  7880891 atattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgta 7880944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 666 - 719
Target Start/End: Complemental strand, 34489489 - 34489436
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgta 719  Q
    ||||||||||||| |||| |||||||||| | |||||| | |||||||||||||    
T  34489489 atatttattcattcaaatcgatagattacattattcaaaaccgctaaaaacgta 34489436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 765 - 810
Target Start/End: Original strand, 35086249 - 35086294
Alignment:
Q  765 tacaacgacaaaatgtctataaataatatgatacaattaaagtgac 810  Q
    |||||| |||||||| ||| ||||||||||||||| ||||||||||    
T  35086249 tacaacaacaaaatgcctacaaataatatgatacacttaaagtgac 35086294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 94; Significance: 2e-45; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 653 - 846
Target Start/End: Original strand, 43369550 - 43369743
Alignment:
Q  653 caaaattaaatcaatatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacattt 752  Q
    ||||| |||| | ||||| ||||||||||||||||||||||| |||||||| |||||| |||||||| | ||||| |||| ||| ||||||||| |||      
T  43369550 caaaaataaaacgatattcattcatttaaattgatagattacatcattcaatatcgctgaaaacgtaaaggataaatttgtaaacaaacttacatcatac 43369649  T
Q  753 aagttaatagcgtacaacgacaaaatgtctataaataatatgatacaattaaagtgactggaatattcatgcatccgtatctataacgttgatg 846  Q
    ||||||||| | ||||||| ||||||| ||||||||||||||||| ||||||||||||| ||||| ||||||||||| ||||  ||||||||||    
T  43369650 aagttaatatcatacaacggcaaaatgcctataaataatatgataaaattaaagtgactagaatactcatgcatccggatctgcaacgttgatg 43369743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 666 - 823
Target Start/End: Original strand, 7640564 - 7640722
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgt 765  Q
    ||||| ||||||| |||| || ||||||| |||||||||| ||||||||||||| ||||| | | ||| || ||||| |||||||  ||||||||||| |    
T  7640564 atattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaatgatgaatctgcgaacaaactcacaacatccaagttaatagcat 7640663  T
Q  766 acaacgacaaaatgtctataaata-atatgatacaattaaagtgactggaatattcatg 823  Q
    | ||||||| |||| ||||||| | |||||||  ||||||||||||  |||||| ||||    
T  7640664 ataacgacataatgcctataaaaatatatgatgaaattaaagtgaccagaatatccatg 7640722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 666 - 818
Target Start/End: Complemental strand, 34773999 - 34773846
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgt 765  Q
    ||||| ||||||| |||| || ||||||| |||||||||| ||||||||||||| | ||||| | |||||| ||||| ||| |||  ||||||||||  |    
T  34773999 atattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggataaatctgcaaacaaactcacagcatccaagttaatagtat 34773900  T
Q  766 acaacgacaaaatgtctataaata-atatgatacaattaaagtgactggaatat 818  Q
    | ||||| | |||| ||| ||| | |||||||  ||||||||||||||||||||    
T  34773899 ataacgatataatgcctacaaaaatatatgatgaaattaaagtgactggaatat 34773846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 666 - 823
Target Start/End: Complemental strand, 26583998 - 26583839
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaa-gttaatagcg 764  Q
    ||||| ||||||| |||| |  ||||||| ||||||||||||| |||||||||| | ||| | | ||| ||||| || ||| |||| || |||||||||     
T  26583998 atattcattcattcaaatcgtgagattacatcattcaacatcgttaaaaacgtaaaggatgaatctgcgaataagctcacagcattcaaagttaatagca 26583899  T
Q  765 tacaacgacaaaatgtctataaata-atatgatacaattaaagtgactggaatattcatg 823  Q
    || ||||||| |||| ||| ||| | |||||||| |||||||||||| ||||||||||||    
T  26583898 tataacgacataatgcctacaaaaatatatgataaaattaaagtgaccggaatattcatg 26583839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 739 - 850
Target Start/End: Original strand, 30756701 - 30756812
Alignment:
Q  739 aacttacaacatttaagttaatagcgtacaacgacaaaatgtctataaataatatgatacaattaaagtgactggaatattcatgcatccgtatctataa 838  Q
    |||||||||||  |||||||| ||| || |||||||||||| ||||||||||||||||| || | |||| || | |||| |||||| |||| ||||  ||    
T  30756701 aacttacaacacctaagttaacagcataaaacgacaaaatgcctataaataatatgataaaacttaagtcaccgaaatactcatgcttccggatctgcaa 30756800  T
Q  839 cgttgatgtcca 850  Q
    ||||||||||||    
T  30756801 cgttgatgtcca 30756812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 666 - 823
Target Start/End: Original strand, 433480 - 433638
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgt 765  Q
    ||||| ||||||| |||| || ||||||| |||||||||| ||||||||||||| | ||| | | ||| || ||||| |||||||  ||||||||||| |    
T  433480 atattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaactcacaacatccaagttaatagcat 433579  T
Q  766 acaacgacaaaatgtctataaata-atatgatacaattaaagtgactggaatattcatg 823  Q
    | |||  || |||| ||| ||| | |||||||| ||||||||| || ||||||||||||    
T  433580 ataacagcataatgcctacaaaaatatatgataaaattaaagtcaccggaatattcatg 433638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 666 - 818
Target Start/End: Original strand, 2843030 - 2843183
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgt 765  Q
    ||||| ||||||| ||||||| ||||||| |||||||||| ||||||||||||| | ||| | | ||  || ||||| ||| ||| |||| ||||||| |    
T  2843030 atattcattcattcaaattgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatatgtgaacaaactcacagcatctaagctaatagcat 2843129  T
Q  766 acaacgacaaaatgtctataaata-atatgatacaattaaagtgactggaatat 818  Q
    | ||||||| |||| ||| ||| | |||||||  |||||||||||| |||||||    
T  2843130 ataacgacataatgcctacaaaaatatatgatgaaattaaagtgaccggaatat 2843183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 666 - 817
Target Start/End: Complemental strand, 20083626 - 20083474
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgt 765  Q
    ||||||||||||| |||| |||| | ||| ||||| |||||||||| ||| ||| ||||| | | ||| || ||||| | |||||  |||||||||||||    
T  20083626 atatttattcattcaaatcgatatagtacatcatttaacatcgctacaaatgtaaatgatgaatctgcgaacaaactaataacatcaaagttaatagcgt 20083527  T
Q  766 acaacgacaaaatgtctataaata-atatgatacaattaaagtgactggaata 817  Q
    | ||||||| |||| ||| ||| | |||||||| || ||||||||| ||||||    
T  20083526 ataacgacataatgcctacaaaaatatatgataaaactaaagtgaccggaata 20083474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 744 - 797
Target Start/End: Original strand, 9977097 - 9977150
Alignment:
Q  744 acaacatttaagttaatagcgtacaacgacaaaatgtctataaataatatgata 797  Q
    |||||||  ||||||||||| ||||||||||||||||||| |||||||||||||    
T  9977097 acaacatccaagttaatagcatacaacgacaaaatgtctaaaaataatatgata 9977150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 666 - 818
Target Start/End: Complemental strand, 26492653 - 26492500
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgt 765  Q
    ||||| ||||||| |||| || ||||||| |||||||||| ||||||||||||| | ||| | | ||  || ||||| ||| |||  ||||||||||| |    
T  26492653 atattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaagatgaatctgtgaacaaactcacagcatccaagttaatagcat 26492554  T
Q  766 acaacgacaaaatgtctataaata-atatgatacaattaaagtgactggaatat 818  Q
    | ||| ||| |||| ||| ||| | |||||||| |||||||||||| |||||||    
T  26492553 ataacaacataatgcctacaaaaatatatgataaaattaaagtgaccggaatat 26492500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 666 - 834
Target Start/End: Complemental strand, 35261585 - 35261416
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgt 765  Q
    ||||| ||||||| ||||||||||| ||| ||||| |||| | |||||||| || | ||| | | ||| || ||||| |||| ||  ||||||||||| |    
T  35261585 atattcattcattcaaattgatagagtacatcatttaacaccactaaaaacataaaggatgaatctgcgaacaaactcacaatatccaagttaatagcat 35261486  T
Q  766 acaacgacaaaatgtctataaata-atatgatacaattaaagtgactggaatattcatgcatccgtatct 834  Q
    |||||| || |||| ||| ||| | |||||||| |||||||||||| ||||||  ||||| |||| ||||    
T  35261485 acaacggcataatgcctacaaaaatatatgataaaattaaagtgaccggaatacacatgcctccggatct 35261416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 738 - 797
Target Start/End: Original strand, 13796810 - 13796869
Alignment:
Q  738 aaacttacaacatttaagttaatagcgtacaacgacaaaatgtctataaataatatgata 797  Q
    ||||| |||||||  ||||||||||| ||||||||||||||| ||| |||||||||||||    
T  13796810 aaactcacaacatccaagttaatagcatacaacgacaaaatgcctacaaataatatgata 13796869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 702 - 797
Target Start/End: Original strand, 28407763 - 28407858
Alignment:
Q  702 aacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgtacaacgacaaaatgtctataaataatatgata 797  Q
    ||||||||||||||| || | | ||| | ||| || ||||| ||| |||  ||||||||||| ||||||| ||||||||||| |||||||||||||    
T  28407763 aacatcgctaaaaacataaagggtaaatctgcgaacaaactcacagcatccaagttaatagcatacaacggcaaaatgtctacaaataatatgata 28407858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 666 - 797
Target Start/End: Original strand, 34899413 - 34899547
Alignment:
Q  666 atatttattcatttaaattgatagattacgtc--attc-aacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatag 762  Q
    ||||||||||||| ||||||||||| ||| ||  || | |||||||||||||||||| | | | | | ||| || ||||| |||||||  ||||||||||    
T  34899413 atatttattcattcaaattgatagagtacatcaaatacaaacatcgctaaaaacgtaaagggtgaatctgcgaacaaactcacaacatccaagttaatag 34899512  T
Q  763 cgtacaacgacaaaatgtctataaataatatgata 797  Q
    | ||||||| |||||||  || |||||||||||||    
T  34899513 catacaacggcaaaatgcatacaaataatatgata 34899547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 702 - 797
Target Start/End: Complemental strand, 47590557 - 47590462
Alignment:
Q  702 aacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgtacaacgacaaaatgtctataaataatatgata 797  Q
    ||||||||| |||||||| | | ||| | |||||| ||||| ||||||   ||||||||||| ||||||| ||||||| ||| |||||||||||||    
T  47590557 aacatcgctgaaaacgtaaagggtaaatctgcaaacaaactcacaacacccaagttaatagcttacaacggcaaaatgcctacaaataatatgata 47590462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 665 - 763
Target Start/End: Complemental strand, 6002316 - 6002218
Alignment:
Q  665 aatatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagc 763  Q
    |||||| ||||||| |||| ||||| |||| | ||||||||||| |||||||||| ||||||| | ||  |||||||| ||| |||  |||||||||||    
T  6002316 aatattcattcattcaaatcgataggttacattattcaacatcgttaaaaacgtaaatgataaatctgtgaataaactcacatcatccaagttaatagc 6002218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 666 - 823
Target Start/End: Complemental strand, 23085809 - 23085651
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgt 765  Q
    ||||| ||||||| |||| || ||||||| |||||||||| ||||||||||||| | ||| | | ||| || ||||| |||  ||  || |||||||| |    
T  23085809 atattgattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaactcacagtatccaaattaatagcat 23085710  T
Q  766 acaacgacaaaatgtctataaata-atatgatacaattaaagtgactggaatattcatg 823  Q
    | ||||||| |||| ||| ||| | |||||||| ||||||||| || ||||||| ||||    
T  23085709 ataacgacataatgcctacaaaaatatatgataaaattaaagtcaccggaatatccatg 23085651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 666 - 823
Target Start/End: Complemental strand, 23786863 - 23786705
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgt 765  Q
    ||||| ||||||| || | || ||||||| ||||||||||  |||||||||||| ||||| | | ||| || ||||| ||| ||| |||||| ||||| |    
T  23786863 atattcattcattcaattagagagattacatcattcaacacagctaaaaacgtaaatgatgaatctgcgaacaaactcacagcatctaagttgatagcat 23786764  T
Q  766 acaacgacaaaatgtctataaata-atatgatacaattaaagtgactggaatattcatg 823  Q
    | ||| ||| ||||  || ||| | |||||||| |||||||||||| ||||||| ||||    
T  23786763 ataacaacataatgcatacaaaaatatatgataaaattaaagtgacaggaatatccatg 23786705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 666 - 823
Target Start/End: Complemental strand, 32684956 - 32684798
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgt 765  Q
    ||||| ||||||| |||| || ||| ||| |||||||||| ||||||||||||| | ||| | | | | || ||||||||| |||  ||||||||||| |    
T  32684956 atattcattcattcaaatcgagagactacatcattcaacaccgctaaaaacgtaaaggatgaatctacgaacaaacttacagcatccaagttaatagcat 32684857  T
Q  766 acaacgacaaaatgtctataaata-atatgatacaattaaagtgactggaatattcatg 823  Q
    | |||| || |||| ||| ||| | |||||||| || ||||||||| ||||||| ||||    
T  32684856 ataacggcataatgcctacaaaaatatatgataaaactaaagtgaccggaatatccatg 32684798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 666 - 823
Target Start/End: Original strand, 45198822 - 45198980
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgt 765  Q
    ||||| ||||||| |||| || ||||||| |||||||||| ||||||||||||| | ||| | | ||| || | ||| |||||||  ||||||||||  |    
T  45198822 atattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacatactcacaacatccaagttaatagtat 45198921  T
Q  766 acaacgacaaaatgtctataaata-atatgatacaattaaagtgactggaatattcatg 823  Q
    | ||||||| |||  ||| ||| | |||||||| ||| |||||||| ||||||| ||||    
T  45198922 ataacgacataatacctacaaaaatatatgataaaatcaaagtgaccggaatatccatg 45198980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 666 - 818
Target Start/End: Complemental strand, 20116869 - 20116717
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgt 765  Q
    ||||| ||||||| |||| || ||||||| |||||| ||| ||||||||||||| ||||| | | ||  || ||||| |||||||  ||||||||||| |    
T  20116869 atattcattcattcaaatcgagagattacatcattccacaccgctaaaaacgtaaatgatgaatctgtgaacaaactcacaacatccaagttaatagcat 20116770  T
Q  766 acaacgacaaaatgtctataaata-atatgatacaattaaagtgactggaatat 818  Q
    |  |||||| |||| ||| ||| | || ||||| |||||||||||| |||||||    
T  20116769 a-tacgacataatgcctacaaaaatatttgataaaattaaagtgaccggaatat 20116717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 666 - 822
Target Start/End: Complemental strand, 46822303 - 46822146
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgt 765  Q
    ||||| ||||||| |||| || ||||||| |||||||||| | ||||||||||| | ||| | | ||| || ||||| ||| |||  ||||||||||| |    
T  46822303 atattaattcattcaaatcgagagattacatcattcaacaccactaaaaacgtaaaggatgaatctgcgaacaaactcacagcatccaagttaatagcat 46822204  T
Q  766 acaacgacaaaatgtctataaata-atatgatacaattaaagtgactggaatattcat 822  Q
    | |||| || |||| ||| ||| | |||||||  |||||||||||  |||||||||||    
T  46822203 ataacggcataatgcctacaaaaatatatgatgaaattaaagtgatcggaatattcat 46822146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 753 - 797
Target Start/End: Original strand, 8001442 - 8001486
Alignment:
Q  753 aagttaatagcgtacaacgacaaaatgtctataaataatatgata 797  Q
    ||||||||||| ||||||| ||||||| |||||||||||||||||    
T  8001442 aagttaatagcatacaacggcaaaatgcctataaataatatgata 8001486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 702 - 834
Target Start/End: Original strand, 19404602 - 19404734
Alignment:
Q  702 aacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgtacaacgacaaaatgtctataaataatatgatacaat 801  Q
    |||||||||||||| ||| | ||| | | ||| || ||||| ||| |||  ||||||||||||| ||||| ||||| | ||| ||||||||||||| |||    
T  19404602 aacatcgctaaaaatgtaaaggatgaatctgcgaacaaactcacagcatccaagttaatagcgtgcaacggcaaaaagcctacaaataatatgataaaat 19404701  T
Q  802 taaagtgactggaatattcatgcatccgtatct 834  Q
      |||| |||| |||| |||||| |||| ||||    
T  19404702 ctaagtcactgaaatactcatgcttccggatct 19404734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 753 - 797
Target Start/End: Original strand, 28044652 - 28044696
Alignment:
Q  753 aagttaatagcgtacaacgacaaaatgtctataaataatatgata 797  Q
    ||||||||||| ||||||| ||||||||||| |||||||||||||    
T  28044652 aagttaatagcatacaacggcaaaatgtctaaaaataatatgata 28044696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 668 - 788
Target Start/End: Complemental strand, 36144030 - 36143910
Alignment:
Q  668 atttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgtac 767  Q
    ||||||||||  ||||||||||| ||| |||||||||| |||||||||| || || || | | ||| ||| |||| ||| |||  ||||||||||  ||     
T  36144030 atttattcatccaaattgatagagtacatcattcaacaccgctaaaaacataaataatgaatctgctaattaactcacaccatccaagttaatagtatat 36143931  T
Q  768 aacgacaaaatgtctataaat 788  Q
    ||||||| |||||||| ||||    
T  36143930 aacgacataatgtctacaaat 36143910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 754 - 810
Target Start/End: Original strand, 46244149 - 46244205
Alignment:
Q  754 agttaatagcgtacaacgacaaaatgtctataaataatatgatacaattaaagtgac 810  Q
    |||||||| | ||||| ||||||||| ||| ||||||||||||| ||||||||||||    
T  46244149 agttaataacatacaatgacaaaatgcctacaaataatatgataaaattaaagtgac 46244205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 753 - 797
Target Start/End: Original strand, 48316708 - 48316752
Alignment:
Q  753 aagttaatagcgtacaacgacaaaatgtctataaataatatgata 797  Q
    ||||||||||| ||||||||||||||| ||| |||||||||||||    
T  48316708 aagttaatagcatacaacgacaaaatgcctacaaataatatgata 48316752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 765 - 824
Target Start/End: Original strand, 4999937 - 4999996
Alignment:
Q  765 tacaacgacaaaatgtctataaataatatgatacaattaaagtgactggaatattcatgc 824  Q
    |||||||| |||||||||||||||||||||||| |||| || | ||  ||||||||||||    
T  4999937 tacaacgaaaaaatgtctataaataatatgataaaatttaaatcaccagaatattcatgc 4999996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 666 - 725
Target Start/End: Original strand, 23425162 - 23425221
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgat 725  Q
    ||||| ||||||| ||||| | ||||||| | |||||||||||||||||||||| |||||    
T  23425162 atattcattcattcaaattaagagattacattattcaacatcgctaaaaacgtaaatgat 23425221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 738 - 793
Target Start/End: Complemental strand, 25255437 - 25255382
Alignment:
Q  738 aaacttacaacatttaagttaatagcgtacaacgacaaaatgtctataaataatat 793  Q
    ||||| ||||||| |||||||||||| ||||||||||||||| ||| |||| ||||    
T  25255437 aaactcacaacatctaagttaatagcatacaacgacaaaatgcctacaaatgatat 25255382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 666 - 797
Target Start/End: Complemental strand, 40993442 - 40993308
Alignment:
Q  666 atatttattcatttaaattgatagattacgtc--attc-aacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatag 762  Q
    ||||| |||||||||||| |||||| ||| ||  || | |||||||||||||||||| | | | | | ||| || ||||| ||||||   |||||||||     
T  40993442 atattcattcatttaaatcgatagagtacatcagatacaaacatcgctaaaaacgtaaagggtgaatctgcgaacaaactcacaacacccaagttaataa 40993343  T
Q  763 cgtacaacgacaaaatgtctataaataatatgata 797  Q
    | ||||||||||||||| ||| |||||||||||||    
T  40993342 catacaacgacaaaatgcctacaaataatatgata 40993308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 666 - 716
Target Start/End: Complemental strand, 17611679 - 17611629
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaac 716  Q
    ||||| ||||||| ||||||||||| ||| ||||||||||| |||||||||    
T  17611679 atattcattcattcaaattgatagagtacatcattcaacattgctaaaaac 17611629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 665 - 719
Target Start/End: Original strand, 21609457 - 21609511
Alignment:
Q  665 aatatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgta 719  Q
    ||||||||||||||||||| |||||| ||  ||||||||||||| ||||| ||||    
T  21609457 aatatttattcatttaaatagatagagtatatcattcaacatcgataaaagcgta 21609511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 666 - 823
Target Start/End: Original strand, 42066851 - 42067009
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgt 765  Q
    ||||| ||||||| |||| || ||||||| |||||||||| ||||||||||||| |  |||| | ||| || | ||| |||||||  |||||||||||      
T  42066851 atattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaagaataaatatgcgaacatactcacaacatccaagttaatagcac 42066950  T
Q  766 acaacgacaaaatgtctataaata-atatgatacaattaaagtgactggaatattcatg 823  Q
    | | || |   ||| ||| ||| | |||||||| |||||||||||| ||||||||||||    
T  42066951 atatcggcgttatgcctacaaaaatatatgataaaattaaagtgaccggaatattcatg 42067009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 666 - 719
Target Start/End: Original strand, 1485045 - 1485098
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgta 719  Q
    ||||| ||||||| |||| || ||||||| |||||||||| |||||||||||||    
T  1485045 atattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgta 1485098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 700 - 793
Target Start/End: Complemental strand, 11344057 - 11343964
Alignment:
Q  700 tcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgtacaacgacaaaatgtctataaataatat 793  Q
    |||||||||||||||||||| ||||| | | |||| | |||||||  |||  |||||||||||| ||||||  ||||||  ||| |||||||||    
T  11344057 tcaacatcgctaaaaacgtaaatgatgaatctgcatacaaacttaagacacctaagttaatagcatacaacatcaaaatacctacaaataatat 11343964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 672 - 844
Target Start/End: Original strand, 13592305 - 13592477
Alignment:
Q  672 attcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgtacaacg 771  Q
    ||||||| |||| |||||| ||| | ||||||||  |||||||| ||| | ||| | | ||| || ||||| ||| |||  ||||||||||| || ||||    
T  13592305 attcattaaaatcgatagagtacat-attcaacactgctaaaaatgtaaaggatgaatctgcgaacaaactcacagcatcgaagttaatagcatataacg 13592403  T
Q  772 acaaaatgtctataaata-atatgatacaattaaagtgactggaatattcatgcatccgtatctataacgttga 844  Q
    ||| |||| ||| ||| | |||||||| ||||||||||||  |||||  |||||||||| ||||  ||||||||    
T  13592404 acataatgcctacaaaaatatatgataaaattaaagtgaccagaatacccatgcatccggatctgcaacgttga 13592477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 790 - 823
Target Start/End: Original strand, 14627793 - 14627826
Alignment:
Q  790 atatgatacaattaaagtgactggaatattcatg 823  Q
    |||||||| |||||||||||||||||||||||||    
T  14627793 atatgataaaattaaagtgactggaatattcatg 14627826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 70; Significance: 4e-31; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 671 - 844
Target Start/End: Complemental strand, 36184826 - 36184653
Alignment:
Q  671 tattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgtacaac 770  Q
    |||||||||||||||||||| ||| ||||||||||| |||||||||||| |  ||| |||| |||| ||||| |||||||  ||||||||||| ||||||    
T  36184826 tattcatttaaattgatagagtacatcattcaacattgctaaaaacgtaaagaatagttttacaaacaaactcacaacatccaagttaatagcatacaac 36184727  T
Q  771 gacaaaatgtctataaataatatgatacaattaaagtgactggaatattcatgcatccgtatctataacgttga 844  Q
    ||||||||| ||| ||||| ||||||| ||| ||||||||   |||||| |||| |||  ||||| ||||||||    
T  36184726 gacaaaatgcctagaaatagtatgataaaatcaaagtgaccataatatttatgcctcctgatctacaacgttga 36184653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 666 - 823
Target Start/End: Original strand, 9528666 - 9528824
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgt 765  Q
    ||||| ||||||| |||| || ||||||| |||||||||| ||||||||||||| | ||| | | ||| || ||||| |||||||| ||||||||||| |    
T  9528666 atattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaactcacaacattcaagttaatagcat 9528765  T
Q  766 acaacgacaaaatgtctataaata-atatgatacaattaaagtgactggaatattcatg 823  Q
    | ||||||| |||| ||| ||| | |||||||| |||||||||||| ||||||| ||||    
T  9528766 ataacgacataatgcctacaaaaatatatgataaaattaaagtgaccggaatatccatg 9528824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 666 - 823
Target Start/End: Complemental strand, 25274183 - 25274025
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgt 765  Q
    ||||| ||||||| |||| || ||||||| |||||||||| ||||||||||||| | ||| | | ||| || ||||| ||||||| |||||||||||| |    
T  25274183 atattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaactcacaacatctaagttaatagcat 25274084  T
Q  766 acaacgacaaaatgtctataaata-atatgatacaattaaagtgactggaatattcatg 823  Q
    | |||  || |||| ||| ||| | |||||||| |||||||||||| ||||||| ||||    
T  25274083 ataacagcataatgcctacaaaaatatatgataaaattaaagtgaccggaatatccatg 25274025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 666 - 823
Target Start/End: Original strand, 38706499 - 38706657
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgt 765  Q
    ||||| ||||||| |||| || ||||||| |||||||||| ||||||||||||| | ||| | | ||| || ||||| ||| |||  ||||||||||| |    
T  38706499 atattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaagatgaatctgcgaacaaactcacatcatccaagttaatagcat 38706598  T
Q  766 acaacgacaaaatgtctataaata-atatgatacaattaaagtgactggaatattcatg 823  Q
    | ||||||| |||||||| ||| | |||||||| |||||||||||| | ||||| ||||    
T  38706599 ataacgacataatgtctacaaaaatatatgataaaattaaagtgaccgaaatatccatg 38706657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 665 - 817
Target Start/End: Complemental strand, 4821217 - 4821064
Alignment:
Q  665 aatatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaag-ttaatagc 763  Q
    ||||||||||||||||||| |||||||||| ||| |||  |||||||||||| || ||||| | | ||  |||||| | |||| || ||   |||||  |    
T  4821217 aatatttattcatttaaatggatagattacatcaatcagtatcgctaaaaacataaatgatgaatatgtgaataaaatcacaatatctattattaattac 4821118  T
Q  764 gtacaacgacaaaatgtctataaataatatgatacaattaaagtgactggaata 817  Q
     |||||||| |||||||||| ||||||||||||| |||||||||||||| ||||    
T  4821117 atacaacgataaaatgtctacaaataatatgataaaattaaagtgactgaaata 4821064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 666 - 818
Target Start/End: Original strand, 50766301 - 50766454
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgt 765  Q
    ||||| |||||||||||| || ||||||| |||||||||| ||||||||||||||||||| | | | | || ||||| ||| |||| ||||||||||| |    
T  50766301 atattcattcatttaaatcgagagattacatcattcaacaccgctaaaaacgtagatgatgaatctacgaacaaactcacagcattcaagttaatagcat 50766400  T
Q  766 acaacgacaaaatgtctataaata-atatgatacaattaaagtgactggaatat 818  Q
    | |||  || |||| ||| ||| | |||||||  |||||||||||| |||||||    
T  50766401 ataacagcataatgcctacaaaaatatatgatgaaattaaagtgaccggaatat 50766454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 666 - 817
Target Start/End: Complemental strand, 12265761 - 12265610
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgt 765  Q
    ||||| ||||||| |||| ||||| |||| |||||||||||||||||||||||| ||||| | | ||  || ||||| |||||||  ||||||||||| |    
T  12265761 atattcattcattcaaatcgataggttacatcattcaacatcgctaaaaacgta-atgatgaatctgtgaacaaactcacaacatcaaagttaatagcat 12265663  T
Q  766 acaacgacaaaatgtctataaata-atatgatacaattaaagtgactggaata 817  Q
    | |||| || |||| ||| ||| | |||||||| ||||||||||| |||||||    
T  12265662 ataacggcataatgcctaaaaaaatatatgataaaattaaagtgattggaata 12265610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 672 - 823
Target Start/End: Complemental strand, 44947706 - 44947554
Alignment:
Q  672 attcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgtacaacg 771  Q
    |||||||||||| || ||||||| |||||||||| ||||||||||||| | ||| | | ||| || ||||| |||||||  ||||||||| | || ||||    
T  44947706 attcatttaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaactcacaacatccaagttaataacatataacg 44947607  T
Q  772 acaaaatgtctataaata-atatgatacaattaaagtgactggaatattcatg 823  Q
     || |||| ||| ||| | |||||||| |||||||||||| ||||||| ||||    
T  44947606 gcacaatgcctacaaaaatatatgataaaattaaagtgaccggaatatccatg 44947554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 744 - 819
Target Start/End: Original strand, 49072632 - 49072707
Alignment:
Q  744 acaacatttaagttaatagcgtacaacgacaaaatgtctataaataatatgatacaattaaagtgactggaatatt 819  Q
    |||||||||||||||||||| |||||| | |||||||||| |||||||| |||| ||| ||||||| |||||||||    
T  49072632 acaacatttaagttaatagcatacaacaataaaatgtctacaaataatacgataaaatgaaagtgattggaatatt 49072707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 666 - 823
Target Start/End: Complemental strand, 4644158 - 4644000
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgt 765  Q
    ||||| ||||||| |||| || ||||||| |||||||||||||||||||||||| | ||| | | ||| || || || |||||||  ||||||||||| |    
T  4644158 atattcattcattcaaatcgagagattacatcattcaacatcgctaaaaacgtaaaggatgaatctgcgaacaagctcacaacatccaagttaatagcat 4644059  T
Q  766 acaacgacaaaatgtctataa-ataatatgatacaattaaagtgactggaatattcatg 823  Q
    | |||| || |||| ||| || |  |||||||| ||||||| |||| ||||||||||||    
T  4644058 ataacggcataatgcctacaataatatatgataaaattaaattgaccggaatattcatg 4644000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 666 - 823
Target Start/End: Complemental strand, 51318285 - 51318127
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgt 765  Q
    ||||| |||||||||||| || ||||||| ||||||||||  |||||||||||| | ||| | | ||  || ||||| ||| |||  ||||||||||| |    
T  51318285 atattcattcatttaaatcgagagattacatcattcaacactgctaaaaacgtaaaggatgaatctgtgaacaaactcacatcatccaagttaatagcat 51318186  T
Q  766 acaacgacaaaatgtctataaata-atatgatacaattaaagtgactggaatattcatg 823  Q
    | ||||||| |||| ||| ||| | |||||||| |||||||||||| ||||||| ||||    
T  51318185 ataacgacataatgcctacaaaaatatatgataaaattaaagtgaccggaatatccatg 51318127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 666 - 809
Target Start/End: Original strand, 46990920 - 46991064
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgt 765  Q
    ||||| ||||||| |||| |||||| ||| |||||||||  | ||||||||||| ||||| | | ||| || ||||| |||||||| ||||||| ||| |    
T  46990920 atattcattcattcaaatcgatagagtacatcattcaacgccactaaaaacgtaaatgatgaatctgcgaacaaactcacaacattcaagttaacagcat 46991019  T
Q  766 acaacgacaaaatgtctataaata-atatgatacaattaaagtga 809  Q
    | ||||||| |||| ||| ||| | |||||||| |||||||||||    
T  46991020 agaacgacataatgcctacaaaaatatatgataaaattaaagtga 46991064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 666 - 808
Target Start/End: Complemental strand, 1532208 - 1532065
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgt 765  Q
    ||||| ||||||| |||| || |||||||||||||||||| |||||||||| || | ||| | | ||| || || || |||||||  ||||||||||| |    
T  1532208 atattcattcattcaaatcgagagattacgtcattcaacaccgctaaaaacataaaggatgaatctgcgaacaagctcacaacatccaagttaatagcat 1532109  T
Q  766 acaacgacaaaatgtctataaata-atatgatacaattaaagtg 808  Q
    | |||| || |||||||| ||| | |||||||| ||||||||||    
T  1532108 ataacggcataatgtctacaaaaatatatgataaaattaaagtg 1532065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 666 - 824
Target Start/End: Original strand, 10359338 - 10359496
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgt 765  Q
    ||||| ||||||  |||| || ||||||| |||||||||| ||||||||||||| | ||| | ||||| || ||||| ||| |||  ||||||||||| |    
T  10359338 atattcattcatccaaatcgagagattacatcattcaacaccgctaaaaacgta-aagatgaatttgcgaacaaactcacatcatccaagttaatagcat 10359436  T
Q  766 acaacgacaaaatgtctataaata-atatgatacaattaaagtgactggaatattcatgc 824  Q
    | |||| || |||| ||| ||| | |||||||| || ||||||||||||||||| |||||    
T  10359437 ataacggcataatgcctacaaaaatatatgataaaaataaagtgactggaatatccatgc 10359496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 680 - 834
Target Start/End: Complemental strand, 21090428 - 21090273
Alignment:
Q  680 aaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgtacaacgacaaaatg 779  Q
    ||||||| ||||||| |||||||||| ||||||||||||| | ||| | | |||||| ||||| |||  ||  ||||||||| | || ||||||| ||||    
T  21090428 aaattgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcaaacaaactcacactatccaagttaataacatataacgacataatg 21090329  T
Q  780 tcta-taaataatatgatacaattaaagtgactggaatattcatgcatccgtatct 834  Q
     |||  |||  | |||||| |||||||||||| ||||||||||||| |||| ||||    
T  21090328 cctacaaaagtagatgataaaattaaagtgaccggaatattcatgcttccggatct 21090273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 705 - 796
Target Start/End: Complemental strand, 27652204 - 27652113
Alignment:
Q  705 atcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgtacaacgacaaaatgtctataaataatatgat 796  Q
    ||||||||||||||| | ||| | | ||| || ||||| |||||| | ||||||||||| ||||||| ||||||||||| ||||||||||||    
T  27652204 atcgctaaaaacgtataggatgaatctgcgaacaaactcacaacactcaagttaatagcatacaacggcaaaatgtctacaaataatatgat 27652113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 671 - 823
Target Start/End: Original strand, 37188389 - 37188542
Alignment:
Q  671 tattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgtacaac 770  Q
    |||||||| |||| || ||||||| |||||||||| ||||||||||| | | ||||| | ||| || | ||| ||| |||  ||||||||||| || ||     
T  37188389 tattcattcaaatcgagagattacatcattcaacaccgctaaaaacgcaaaagataaatctgcgaacacactcacagcatccaagttaatagcatataat 37188488  T
Q  771 gacaaaatgtcta-taaataatatgatacaattaaagtgactggaatattcatg 823  Q
    |||| |||| |||  |||| |||||||| |||||||||||| ||||||| ||||    
T  37188489 gacacaatgcctacaaaattatatgataaaattaaagtgacaggaatatccatg 37188542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 700 - 797
Target Start/End: Original strand, 42032372 - 42032469
Alignment:
Q  700 tcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgtacaacgacaaaatgtctataaataatatgata 797  Q
    ||||||||| ||||||| || | |  || |||||||| ||||| |||||||| ||||||||||| ||||||| ||||||| |||  ||||||||||||    
T  42032372 tcaacatcgttaaaaacataaaggtgaaatttgcaaacaaactcacaacattcaagttaatagcatacaacggcaaaatggctaccaataatatgata 42032469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 666 - 822
Target Start/End: Complemental strand, 43444692 - 43444535
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgt 765  Q
    ||||| ||||||| ||||||| ||||||| |||||||||| || ||| |||||| | ||| | | ||| || ||||| ||| |||| || |||||||| |    
T  43444692 atattcattcattcaaattgagagattacatcattcaacaccgttaagaacgtaaaggatgaatctgcgaacaaactcacagcattcaaattaatagcat 43444593  T
Q  766 acaacgacaaaatgtctataaata-atatgatacaattaaagtgactggaatattcat 822  Q
    | |||| || |||| ||| ||| | |||||||  |||||||||||| |||||||||||    
T  43444592 ataacggcataatgcctacaaaaatatatgatgaaattaaagtgaccggaatattcat 43444535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 671 - 850
Target Start/End: Original strand, 35964770 - 35964950
Alignment:
Q  671 tattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgtacaac 770  Q
    |||||||| |||| ||||||  ||  ||||||||| ||||||||||||| |  || | ||||| || || || |||||||  ||||||||||| || |||    
T  35964770 tattcattcaaatcgatagaggacaccattcaacaccgctaaaaacgtaaagaatgagtttgcgaacaatctcacaacatccaagttaatagcatataac 35964869  T
Q  771 gacaaaatgtctataaata-atatgatacaattaaagtgactggaatattcatgcatccgtatctataacgttgatgtcca 850  Q
     ||| |||  ||| ||| | |||||||| |||||||||||||| |||| |||||| |||| ||||  |||||||| |||||    
T  35964870 aacataattcctacaaaaatatatgataaaattaaagtgactgaaatactcatgcctccggatctgcaacgttgacgtcca 35964950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 747 - 810
Target Start/End: Complemental strand, 26123479 - 26123416
Alignment:
Q  747 acatttaagttaatagcgtacaacgacaaaatgtctataaataatatgatacaattaaagtgac 810  Q
    ||||| ||||||||||| |||||| |||| || |||| ||||||||||||| ||||||||||||    
T  26123479 acattcaagttaatagcatacaacaacaatatatctacaaataatatgataaaattaaagtgac 26123416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 664 - 805
Target Start/End: Original strand, 3335951 - 3336093
Alignment:
Q  664 caatatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagc 763  Q
    ||||||| ||||||| ||||  ||||| ||| |||||||||| ||||||||||||| | ||| | | |||||| ||||| | |||||| |||||| ||||    
T  3335951 caatattcattcattcaaatcaatagagtacatcattcaacaccgctaaaaacgtaaaggatgaatctgcaaacaaactcaaaacattcaagttattagc 3336050  T
Q  764 gtacaacgacaaaatgtctataaata-atatgatacaattaaa 805  Q
     || |||| |  |||| ||| ||||| |||||||| |||||||    
T  3336051 atataacggcgtaatgcctacaaatatatatgataaaattaaa 3336093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 665 - 818
Target Start/End: Original strand, 9645312 - 9645466
Alignment:
Q  665 aatatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcg 764  Q
    |||||||||||||| |||| || ||||||| |||||||||| ||| ||||||||| | ||| | | ||| || ||||| ||| |||  |||||||||||     
T  9645312 aatatttattcattcaaatcgagagattacatcattcaacaccgcaaaaaacgtaaaggatgaatctgcgaacaaactcacagcatccaagttaatagca 9645411  T
Q  765 tacaacgacaaaatgtcta-taaataatatgatacaattaaagtgactggaatat 818  Q
    || |||| || |||  |||  |||  |||||||| |||||||||||| |||||||    
T  9645412 tataacggcataatacctacaaaagtatatgataaaattaaagtgaccggaatat 9645466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 666 - 823
Target Start/End: Original strand, 34024227 - 34024385
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgt 765  Q
    ||||| ||||||| |||| || |||||||  ||||||||| ||||||||||||| | ||| | | ||| || ||||| |||||||  ||||||||||| |    
T  34024227 atattcattcattcaaatcgagagattacaccattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaactcacaacatccaagttaatagcat 34024326  T
Q  766 acaacgacaaaatgtctataaata-atatgatacaattaaagtgactggaatattcatg 823  Q
    | ||| ||| ||||  || ||| | |||||||| ||||||| |||| ||||||| ||||    
T  34024327 ataacaacataatgcttacaaaaatatatgataaaattaaaatgaccggaatatccatg 34024385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 666 - 844
Target Start/End: Original strand, 43153806 - 43153983
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgt 765  Q
    ||||||||||||| |||| || ||||| | |||||||| ||||||||||||||| | ||| | |   | || ||||| |||||||  ||||||| ||| |    
T  43153806 atatttattcattcaaatcgagagattgcatcattcaatatcgctaaaaacgtaaaggatgaat---cgaacaaactcacaacatccaagttaacagcat 43153902  T
Q  766 acaacgacaaaatgtctataaata-atatgatacaattaaagtgactggaatattcat-gcatccgtatctataacgttga 844  Q
    | |||| || |||| ||| ||| | |||||||| |||||||||||| ||||||| ||| || |||| |||| |||||||||    
T  43153903 ataacggcataatgcctacaaaaatatatgataaaattaaagtgaccggaatatccatggcctccggatctgtaacgttga 43153983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 744 - 846
Target Start/End: Original strand, 43318153 - 43318255
Alignment:
Q  744 acaacatttaagttaatagcgtacaacgacaaaatgtctataaataatatgatacaattaaagtgactggaatattcatgcatccgtatctataacgttg 843  Q
    |||||||| ||||||||||| || |  ||||||||  ||||||||||| ||||| |||||||||||| | |||||| ||||  ||  ||||||||| |||    
T  43318153 acaacattaaagttaatagcataaagtgacaaaatacctataaataatgtgataaaattaaagtgaccgaaatatttatgcccccagatctataacattg 43318252  T
Q  844 atg 846  Q
    |||    
T  43318253 atg 43318255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 666 - 823
Target Start/End: Original strand, 45227830 - 45227988
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgt 765  Q
    ||||| ||||||| |||| || ||||||| |||||||||| ||||||||||||| | ||| | | | | || ||||| |||||||  ||||||||| | |    
T  45227830 atattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctacgaacaaactcacaacatccaagttaataacat 45227929  T
Q  766 acaacgacaaaatgtctataaata-atatgatacaattaaagtgactggaatattcatg 823  Q
    | |||  || |||| | | ||| | |||||||| |||||||||||| ||||||||||||    
T  45227930 ataaccgcataatgcccacaaaaatatatgataaaattaaagtgaccggaatattcatg 45227988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 666 - 822
Target Start/End: Complemental strand, 9284211 - 9284054
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgt 765  Q
    ||||| ||||||| |||| || ||||||| |||||||||| ||||||||||||| | ||| | | | | || ||||| |||||||  | | ||||||| |    
T  9284211 atattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaagatgaatctacgaacaaactcacaacatccatgataatagcat 9284112  T
Q  766 acaacgacaaaatgtctataaata-atatgatacaattaaagtgactggaatattcat 822  Q
    | |||| || |||| ||| ||| | |||||||  |||||||||||||| |||||||||    
T  9284111 ataacggcataatgcctacaaaaatatatgatgaaattaaagtgactgaaatattcat 9284054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 753 - 850
Target Start/End: Original strand, 19853408 - 19853505
Alignment:
Q  753 aagttaatagcgtacaacgacaaaatgtctataaataatatgatacaattaaagtgactggaatattcatgcatccgtatctataacgttgatgtcca 850  Q
    ||||||||||| ||||||| ||||||| ||| ||||||||||||| || | |||| || | ||||| ||||| |||| ||||  |||||||| |||||    
T  19853408 aagttaatagcatacaacggcaaaatgcctagaaataatatgataaaacttaagtcaccgaaatatccatgcttccggatctgcaacgttgacgtcca 19853505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 665 - 770
Target Start/End: Complemental strand, 29966627 - 29966522
Alignment:
Q  665 aatatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcg 764  Q
    |||||| ||||||||||||  | | ||||| ||||||||||||| |||||||||| | ||| | | ||| || ||||| |||||||  |||||||||||     
T  29966627 aatattcattcatttaaatcaagaaattacatcattcaacatcgttaaaaacgtaaaggatgaatctgcgaacaaactcacaacatccaagttaatagca 29966528  T
Q  765 tacaac 770  Q
    ||||||    
T  29966527 tacaac 29966522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 666 - 818
Target Start/End: Original strand, 53616439 - 53616592
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgt 765  Q
    ||||| ||||||| |||| || ||||||| |||||||||| ||||||||||||| | ||| | | ||| || ||||| ||| |||  ||||||||||| |    
T  53616439 atattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaactcacatcatccaagttaatagcat 53616538  T
Q  766 acaacgacaaaatgtctataaata-atatgatacaattaaagtgactggaatat 818  Q
    | |||| || |||| ||| ||| | |||| ||  |||||||||||| |||||||    
T  53616539 ataacggcataatgcctacaaaaatatataatgaaattaaagtgaccggaatat 53616592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 753 - 850
Target Start/End: Complemental strand, 53811241 - 53811144
Alignment:
Q  753 aagttaatagcgtacaacgacaaaatgtctataaataatatgatacaattaaagtgactggaatattcatgcatccgtatctataacgttgatgtcca 850  Q
    ||||||||||| ||||||| ||||||| ||| ||||||||||||| || | |||| || | |||| |||||| |||| ||||  |||||||| |||||    
T  53811241 aagttaatagcatacaacgccaaaatgcctacaaataatatgataaaacttaagtcaccgaaatactcatgcttccggatctgcaacgttgacgtcca 53811144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 753 - 797
Target Start/End: Original strand, 6155119 - 6155163
Alignment:
Q  753 aagttaatagcgtacaacgacaaaatgtctataaataatatgata 797  Q
    ||||||||||| ||||||||||||||| ||| |||||||||||||    
T  6155119 aagttaatagcatacaacgacaaaatgcctacaaataatatgata 6155163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 753 - 797
Target Start/End: Complemental strand, 9178566 - 9178522
Alignment:
Q  753 aagttaatagcgtacaacgacaaaatgtctataaataatatgata 797  Q
    ||||||||||| ||||||||||||||| ||| |||||||||||||    
T  9178566 aagttaatagcatacaacgacaaaatgcctacaaataatatgata 9178522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 671 - 818
Target Start/End: Complemental strand, 47417957 - 47417809
Alignment:
Q  671 tattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgtacaac 770  Q
    |||||||| |||| || ||||||| |||||||||| ||||||||||||| | ||| | | ||  || ||||| ||| |||| ||||||||| | || |||    
T  47417957 tattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgtgaacaaactcacagcattcaagttaataacatataac 47417858  T
Q  771 gacaaaatgtctataaata-atatgatacaattaaagtgactggaatat 818  Q
    | || |||| ||| ||| | |||||||  ||||||||||| ||||||||    
T  47417857 ggcataatgcctacaaaaatatatgatgaaattaaagtgaatggaatat 47417809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 753 - 797
Target Start/End: Original strand, 56040542 - 56040586
Alignment:
Q  753 aagttaatagcgtacaacgacaaaatgtctataaataatatgata 797  Q
    ||||||||||| ||||||||||||||| ||| |||||||||||||    
T  56040542 aagttaatagcatacaacgacaaaatgcctacaaataatatgata 56040586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 739 - 802
Target Start/End: Original strand, 7008871 - 7008934
Alignment:
Q  739 aacttacaacatttaagttaatagcgtacaacgacaaaatgtctataaataatatgatacaatt 802  Q
    |||| ||||||  |||||||||||| ||||||| ||||||||| | ||||||||||||| ||||    
T  7008871 aactcacaacacctaagttaatagcatacaacggcaaaatgtccacaaataatatgataaaatt 7008934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 785 - 844
Target Start/End: Original strand, 28834159 - 28834218
Alignment:
Q  785 aaataatatgatacaattaaagtgactggaatattcatgcatccgtatctataacgttga 844  Q
    ||||||||||||| |||||||||||| |||||| |||||  |||| ||||| ||||||||    
T  28834159 aaataatatgataaaattaaagtgaccggaatagtcatgtctccggatctacaacgttga 28834218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 754 - 797
Target Start/End: Original strand, 29120276 - 29120319
Alignment:
Q  754 agttaatagcgtacaacgacaaaatgtctataaataatatgata 797  Q
    |||||||||| ||||||||||||||| ||| |||||||||||||    
T  29120276 agttaatagcatacaacgacaaaatgcctacaaataatatgata 29120319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 666 - 828
Target Start/End: Original strand, 52097705 - 52097868
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgt 765  Q
    ||||| ||||||| ||||  | ||| ||| |||||| | | ||||||||||||| | | | | | ||| |||||||| |||||||  ||||||||| | |    
T  52097705 atattcattcattcaaatcaacagagtacatcattcgataccgctaaaaacgtaaagggtgaatatgcgaataaactcacaacatccaagttaataccat 52097804  T
Q  766 acaacgacaaaatgtctataaata-atatgatacaattaaagtgactggaatattcatgcatcc 828  Q
    | |||| || |||| ||| ||| | |||||||| |||||||||||| ||||||| |||||||||    
T  52097805 ataacgtcataatgcctacaaagatatatgataaaattaaagtgaccggaatatccatgcatcc 52097868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 747 - 797
Target Start/End: Original strand, 22305511 - 22305561
Alignment:
Q  747 acatttaagttaatagcgtacaacgacaaaatgtctataaataatatgata 797  Q
    ||||| ||||||||||| ||||||||||||||  ||| |||||||||||||    
T  22305511 acattcaagttaatagcatacaacgacaaaatacctacaaataatatgata 22305561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 673 - 719
Target Start/End: Original strand, 31381512 - 31381558
Alignment:
Q  673 ttcatttaaattgatagattacgtcattcaacatcgctaaaaacgta 719  Q
    |||||| |||| || ||||||| ||||||||||||||||||||||||    
T  31381512 ttcattcaaatcgagagattacatcattcaacatcgctaaaaacgta 31381558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 738 - 796
Target Start/End: Complemental strand, 36194936 - 36194878
Alignment:
Q  738 aaacttacaacatttaagttaatagcgtacaacgacaaaatgtctataaataatatgat 796  Q
    ||||| |||||||  ||||||||||| ||||||| ||||||| ||| ||||||||||||    
T  36194936 aaactcacaacatccaagttaatagcatacaacggcaaaatgcctacaaataatatgat 36194878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 735 - 797
Target Start/End: Complemental strand, 37684088 - 37684026
Alignment:
Q  735 aataaacttacaacatttaagttaatagcgtacaacgacaaaatgtctataaataatatgata 797  Q
    |||||||| ||||||  || |||||||||  |||||||||||||||| | |||||||||||||    
T  37684088 aataaactcacaacacctaggttaatagcacacaacgacaaaatgtcaacaaataatatgata 37684026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 755 - 797
Target Start/End: Complemental strand, 45418723 - 45418681
Alignment:
Q  755 gttaatagcgtacaacgacaaaatgtctataaataatatgata 797  Q
    ||||||||| ||||||||||||||| ||| |||||||||||||    
T  45418723 gttaatagcatacaacgacaaaatgcctacaaataatatgata 45418681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 665 - 719
Target Start/End: Complemental strand, 49680831 - 49680777
Alignment:
Q  665 aatatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgta 719  Q
    |||||| |||||||||||| || || |||| |||||||||| |||||||||||||    
T  49680831 aatattcattcatttaaatcgagaggttacatcattcaacaccgctaaaaacgta 49680777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 666 - 719
Target Start/End: Complemental strand, 20569557 - 20569504
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgta 719  Q
    ||||| ||||||| |||| || ||||||| |||||||||| |||||||||||||    
T  20569557 atattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgta 20569504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 680 - 805
Target Start/End: Original strand, 21364950 - 21365075
Alignment:
Q  680 aaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgtacaacgacaaaatg 779  Q
    ||||||||||||||| |||||||| |||| |||||| | | | ||| | ||||| || ||||| || || |  |||||| || | |||||||||||||||    
T  21364950 aaattgatagattacatcattcaagatcgttaaaaatggaaaggatgagtttgcgaacaaactcacgacttccaagttagtatcatacaacgacaaaatg 21365049  T
Q  780 tctataaataatatgatacaattaaa 805  Q
    |  | || |||||||||| |||||||    
T  21365050 ttgacaactaatatgataaaattaaa 21365075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 700 - 793
Target Start/End: Original strand, 31891130 - 31891223
Alignment:
Q  700 tcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgtacaacgacaaaatgtctataaataatat 793  Q
    |||| ||||||||||||||| | | | | ||||| || ||||| ||||||   ||||||||||| ||||||| ||||||| ||| |||||||||    
T  31891130 tcaatatcgctaaaaacgtatagggtgaatttgcgaacaaactcacaacacccaagttaatagcatacaacggcaaaatgcctacaaataatat 31891223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 667 - 823
Target Start/End: Complemental strand, 56199395 - 56199238
Alignment:
Q  667 tatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgta 766  Q
    |||| ||||||| |||| || |||| || ||||||||||  |||||||||||| | ||| | | ||| || ||||| ||| |||  ||||||||||| |     
T  56199395 tattcattcattcaaatcgagagatcacatcattcaacactgctaaaaacgtaaaggatgaatctgcgaacaaactcacagcatccaagttaatagcatg 56199296  T
Q  767 caacgacaaaatgtctataaata-atatgatacaattaaagtgactggaatattcatg 823  Q
     |||| || |||||||| ||| | |||||||| ||||||||| |  ||||||||||||    
T  56199295 taacggcataatgtctacaaaaatatatgataaaattaaagtcatcggaatattcatg 56199238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 65; Significance: 4e-28; HSPs: 48)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 673 - 844
Target Start/End: Complemental strand, 33299142 - 33298970
Alignment:
Q  673 ttcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgtacaacga 772  Q
    |||||||||||||||||| ||| |||||||||| | ||||||  ||| ||||| | | ||| || ||||| ||||||| |||||||||||| || ||||     
T  33299142 ttcatttaaattgatagaatacatcattcaacacccctaaaattgtaaatgatgaatctgcgaacaaactcacaacatctaagttaatagcatataacgg 33299043  T
Q  773 caaaatgtctataaata-atatgatacaattaaagtgactggaatattcatgcatccgtatctataacgttga 844  Q
    || |||| ||||||| | |||||||| ||||||||||||| ||||| ||||||||||||||||  ||||||||    
T  33299042 cataatgcctataaaaatatatgataaaattaaagtgactagaatactcatgcatccgtatctgcaacgttga 33298970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 690 - 846
Target Start/End: Original strand, 27746928 - 27747084
Alignment:
Q  690 attacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgtacaacgacaaaatgtctataaata 789  Q
    ||||| |||||||| | ||||||||||||| ||||| | | |||||||||| |||||||||  ||||||||||| || ||||||| |||| ||| ||| |    
T  27746928 attacatcattcaataccgctaaaaacgtaaatgatgaatctgcaaataaatttacaacatccaagttaatagcatataacgacataatgcctacaaaaa 27747027  T
Q  790 -atatgatacaattaaagtgactggaatattcatgcatccgtatctataacgttgatg 846  Q
     |||||||| ||| |||||||| ||||||  |||||||||| ||||| ||||||||||    
T  27747028 tatatgata-aataaaagtgaccggaatacccatgcatccggatctacaacgttgatg 27747084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 675 - 826
Target Start/End: Complemental strand, 8441470 - 8441319
Alignment:
Q  675 catttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgtacaacgaca 774  Q
    |||| ||||||||| | ||| ||||| ||||| ||||| |||||| | ||| | |||||||||||||| | | ||| ||| |||||||| |||||||| |    
T  8441470 cattcaaattgataaaatacatcatttaacattgctaagaacgtaaaagatgaatttgcaaataaactcatatcatctaaattaatagcatacaacgata 8441371  T
Q  775 aaatgtctataaataatatgatacaattaaagtgactggaatattcatgcat 826  Q
    ||||  ||  ||||||||||||| ||||||||| |  |||||||||||||||    
T  8441370 aaatacctgcaaataatatgataaaattaaagttatcggaatattcatgcat 8441319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 666 - 808
Target Start/End: Original strand, 44099725 - 44099868
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgt 765  Q
    ||||||||||||| ||||||| ||||||| |||||||||| ||||||||||||| | ||| | | ||| || ||||| |||||||  ||||||||||| |    
T  44099725 atatttattcattcaaattgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgctaacaaactcacaacatccaagttaatagcat 44099824  T
Q  766 acaacgacaaaatgtctataaata-atatgatacaattaaagtg 808  Q
    | ||||||| ||||  || ||| | |||||||| ||||||||||    
T  44099825 ataacgacataatgcatacaaaaatatatgataaaattaaagtg 44099868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 666 - 818
Target Start/End: Complemental strand, 4809259 - 4809106
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgt 765  Q
    ||||| ||||||| |||| || ||||||| |||||||||| ||||||||||||| | ||| | | ||| || ||||| ||||||| |||||||||||| |    
T  4809259 atattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaactcacaacatctaagttaatagcat 4809160  T
Q  766 acaacgacaaaatgtctataaata-atatgatacaattaaagtgactggaatat 818  Q
    | |||| || |||| ||| ||| | |||||||  |||||||||||| |||||||    
T  4809159 ataacggcataatgcctacaaaaatatatgatgaaattaaagtgaccggaatat 4809106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 672 - 818
Target Start/End: Complemental strand, 2656159 - 2656012
Alignment:
Q  672 attcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgtacaacg 771  Q
    |||||||||||| || ||||||| |||||||||| ||||||||||||| ||||| | ||||| || ||||| ||| |||  ||||||||||| || |||     
T  2656159 attcatttaaatcgagagattacatcattcaacaccgctaaaaacgtaaatgatgaatttgcgaacaaactcacagcatccaagttaatagcatataaca 2656060  T
Q  772 acaaaatgtctataaata-atatgatacaattaaagtgactggaatat 818  Q
     || |||| ||| ||| | |||||||  |||||||||||| |||||||    
T  2656059 gcataatgcctacaaaaatatatgatgaaattaaagtgaccggaatat 2656012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 702 - 797
Target Start/End: Original strand, 28086655 - 28086750
Alignment:
Q  702 aacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgtacaacgacaaaatgtctataaataatatgata 797  Q
    |||||||||||||||||||||||| | | ||  || ||||| | |  | ||||||||||||| ||||||||||||||| ||| |||||||||||||    
T  28086655 aacatcgctaaaaacgtagatgatgaatatgtgaacaaactcatagtacttaagttaatagcatacaacgacaaaatgcctacaaataatatgata 28086750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 738 - 797
Target Start/End: Original strand, 29617153 - 29617212
Alignment:
Q  738 aaacttacaacatttaagttaatagcgtacaacgacaaaatgtctataaataatatgata 797  Q
    ||||| |||||||||||||||||||| |||||| |||||||| ||| |||||||||||||    
T  29617153 aaactcacaacatttaagttaatagcatacaacaacaaaatgcctacaaataatatgata 29617212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 738 - 797
Target Start/End: Complemental strand, 34610046 - 34609987
Alignment:
Q  738 aaacttacaacatttaagttaatagcgtacaacgacaaaatgtctataaataatatgata 797  Q
    |||||||||||||||||||||||||| | ||||| ||||||| |||| ||||||||||||    
T  34610046 aaacttacaacatttaagttaatagcattcaacgccaaaatgcctattaataatatgata 34609987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 666 - 823
Target Start/End: Original strand, 32724270 - 32724428
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgt 765  Q
    ||||| |||||||| ||| || ||||||| |||||||||| ||||||||||||| | ||||| | | | || ||||| |||||||  ||||||||||  |    
T  32724270 atattcattcatttgaatcgagagattacatcattcaacaccgctaaaaacgtaaaggataaatctacgaacaaactcacaacatccaagttaatagtat 32724369  T
Q  766 acaacgacaaaatgtctataaata-atatgatacaattaaagtgactggaatattcatg 823  Q
    | ||||||| |||| ||| ||| | ||| ||||  ||||||||||| ||||||| ||||    
T  32724370 ataacgacataatgcctacaaaaatataagataagattaaagtgaccggaatatccatg 32724428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 666 - 818
Target Start/End: Original strand, 14906712 - 14906865
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgt 765  Q
    ||||| ||||||| |||| || ||||||| |||||||||| ||||||||||||| | ||| | | ||| || ||||| |||  ||  ||||||||||| |    
T  14906712 atattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaactcacaggatccaagttaatagcat 14906811  T
Q  766 acaacgacaaaatgtctataaata-atatgatacaattaaagtgactggaatat 818  Q
    | ||| ||| |||| ||| ||| | |||||||| |||||||||||| |||||||    
T  14906812 ataacaacataatgcctacaaaaatatatgataaaattaaagtgaccggaatat 14906865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 666 - 719
Target Start/End: Complemental strand, 19876493 - 19876440
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgta 719  Q
    ||||||||||||| ||||||| ||||||| |||||||||| |||||||||||||    
T  19876493 atatttattcattcaaattgagagattacatcattcaacaccgctaaaaacgta 19876440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 666 - 719
Target Start/End: Complemental strand, 28240136 - 28240083
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgta 719  Q
    ||||| ||||||| |||| ||||| |||||||||||||||||||||||||||||    
T  28240136 atattcattcattcaaatcgataggttacgtcattcaacatcgctaaaaacgta 28240083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 666 - 818
Target Start/End: Original strand, 43889913 - 43890066
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgt 765  Q
    ||||| ||||||||||||||| ||||||| | ||||||||  |||||||||||| | ||| | | |||||| ||| | ||| |||  ||||||||||| |    
T  43889913 atattcattcatttaaattgagagattacattattcaacaatgctaaaaacgtaaaggatgaatctgcaaacaaaatcacagcatccaagttaatagcat 43890012  T
Q  766 acaacgacaaaatgtctataaata-atatgatacaattaaagtgactggaatat 818  Q
    | |||| || |||| ||| ||| | |||||||  |||||||||||| |||||||    
T  43890013 ataacggcataatgcctacaaaaatatatgatgaaattaaagtgaccggaatat 43890066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 672 - 807
Target Start/End: Original strand, 23851289 - 23851425
Alignment:
Q  672 attcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgtacaacg 771  Q
    ||||||| |||| || ||||||| |||||||||| | ||||||| ||| | ||||| | ||| || ||||| ||||||| |||||||||||| || ||||    
T  23851289 attcattcaaatcgagagattacatcattcaacaccactaaaaaagtaaaagataaatctgcgaacaaactcacaacatctaagttaatagcatataacg 23851388  T
Q  772 acaaaatgtctataaata-atatgatacaattaaagt 807  Q
    ||| |||| ||| ||| | |||||||  |||||||||    
T  23851389 acataatgcctacaaaaatatatgatgaaattaaagt 23851425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 741 - 797
Target Start/End: Original strand, 25238475 - 25238531
Alignment:
Q  741 cttacaacatttaagttaatagcgtacaacgacaaaatgtctataaataatatgata 797  Q
    ||||||||||| ||||| ||| | ||||||| |||||||||||||||||||||||||    
T  25238475 cttacaacattcaagtttataacatacaacggcaaaatgtctataaataatatgata 25238531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 666 - 824
Target Start/End: Complemental strand, 33342728 - 33342570
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgt 765  Q
    ||||| ||||||| ||||  ||||||||| | |||||||| ||||||||  ||| ||||| | | ||| || ||||| ||| |||| ||||||||||| |    
T  33342728 atattcattcattcaaatcaatagattacattattcaacaccgctaaaat-gtaaatgatgaatctgcgaacaaactcacagcattcaagttaatagcat 33342630  T
Q  766 acaacgacaaaatgtctataaata-atatgatacaattaaagtgactggaatattcatgc 824  Q
    | |||| || |||| ||| ||||| |||||||| ||||||||||||  ||||| ||||||    
T  33342629 ataacggcataatgcctacaaatatatatgataaaattaaagtgacctgaatactcatgc 33342570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 673 - 818
Target Start/End: Complemental strand, 11464459 - 11464313
Alignment:
Q  673 ttcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgtacaacga 772  Q
    ||||||||||| || ||||||| |||||||||| ||||||||||||| | ||| | | | | || ||||| ||| |||  ||||||||||| || ||||     
T  11464459 ttcatttaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctacgaacaaactcacatcatccaagttaatagcatataacgg 11464360  T
Q  773 caaaatgtctataaata-atatgatacaattaaagtgactggaatat 818  Q
    || |||| ||| ||| | |||||||  |||||||||||| |||||||    
T  11464359 cataatgcctacaaaaatatatgatgaaattaaagtgaccggaatat 11464313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 666 - 823
Target Start/End: Complemental strand, 11725975 - 11725817
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgt 765  Q
    ||||| ||||||| ||||||| ||||||| |||||||||| ||||||||||||| | ||| | | ||  || ||||| ||| |||  ||||||||||| |    
T  11725975 atattcattcattcaaattgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgtgaacaaactcacatcatccaagttaatagcat 11725876  T
Q  766 acaacgacaaaatgtctataaata-atatgatacaattaaagtgactggaatattcatg 823  Q
    | |||| || |||| ||| ||| | |||||||| || ||||||||| ||| ||| ||||    
T  11725875 ataacggcataatgcctacaaaaatatatgataaaactaaagtgaccggagtatccatg 11725817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 666 - 823
Target Start/End: Complemental strand, 29777514 - 29777356
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgt 765  Q
    ||||| ||||||| |||| || ||||||| |||||||||| ||||||||||||| | ||| | | ||| || ||||| ||| |||  ||||||||||| |    
T  29777514 atattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaactcacagcatccaagttaatagcat 29777415  T
Q  766 acaacgacaaaatgtctataaata-atatgatacaattaaagtgactggaatattcatg 823  Q
    | ||||||| |||| ||  ||| | ||||||||  |||||||| || ||||||| ||||    
T  29777414 ataacgacataatgcctccaaaaatatatgataatattaaagtcaccggaatatccatg 29777356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 666 - 797
Target Start/End: Complemental strand, 15344594 - 15344459
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcat--tcaaca--tcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaata 761  Q
    ||||||||||||| ||||||||||| ||| |||   |||| |  |||||||||||||| | ||| | | ||| || ||||| ||| ||   |||||||||    
T  15344594 atatttattcattcaaattgatagaatacatcagaatcaaaagatcgctaaaaacgtaaaggatgaatctgcgaacaaactcacagcacccaagttaata 15344495  T
Q  762 gcgtacaacgacaaaatgtctataaataatatgata 797  Q
    || ||||||||||||||| ||| |||||||||||||    
T  15344494 gcatacaacgacaaaatgcctacaaataatatgata 15344459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 666 - 797
Target Start/End: Complemental strand, 15433659 - 15433524
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcat--tcaaca--tcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaata 761  Q
    ||||||||||||| ||||||||||| ||| |||   |||| |  |||||||||||||| | ||| | | ||| || ||||| ||| ||   |||||||||    
T  15433659 atatttattcattcaaattgatagaatacatcagaatcaaaagatcgctaaaaacgtaaaggatgaatctgcgaacaaactcacagcacccaagttaata 15433560  T
Q  762 gcgtacaacgacaaaatgtctataaataatatgata 797  Q
    || ||||||||||||||| ||| |||||||||||||    
T  15433559 gcatacaacgacaaaatgcctacaaataatatgata 15433524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 666 - 797
Target Start/End: Complemental strand, 15524963 - 15524828
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcat--tcaaca--tcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaata 761  Q
    ||||||||||||| ||||||||||| ||| |||   |||| |  |||||||||||||| | ||| | | ||| || ||||| ||| ||   |||||||||    
T  15524963 atatttattcattcaaattgatagaatacatcagaatcaaaagatcgctaaaaacgtaaaggatgaatctgcgaacaaactcacagcacccaagttaata 15524864  T
Q  762 gcgtacaacgacaaaatgtctataaataatatgata 797  Q
    || ||||||||||||||| ||| |||||||||||||    
T  15524863 gcatacaacgacaaaatgcctacaaataatatgata 15524828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 666 - 719
Target Start/End: Original strand, 17427014 - 17427067
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgta 719  Q
    ||||| |||||||| ||||||||||||||   ||||||||||||||||||||||    
T  17427014 atattcattcatttgaattgatagattacaatattcaacatcgctaaaaacgta 17427067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 666 - 719
Target Start/End: Original strand, 17430664 - 17430717
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgta 719  Q
    ||||| ||| |||| |||||||||||||  ||||||||||||||||||||||||    
T  17430664 atattcattgatttgaattgatagattatatcattcaacatcgctaaaaacgta 17430717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 753 - 850
Target Start/End: Original strand, 31013502 - 31013599
Alignment:
Q  753 aagttaatagcgtacaacgacaaaatgtctataaataatatgatacaattaaagtgactggaatattcatgcatccgtatctataacgttgatgtcca 850  Q
    ||||||||||| ||||||| ||||||| ||| ||||||||||||| || | |||| |||| ||||  ||||| |||| ||||  |||||||| |||||    
T  31013502 aagttaatagcatacaacggcaaaatgcctacaaataatatgataaaacttaagtcactgaaatacacatgcttccgaatctgcaacgttgacgtcca 31013599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 666 - 763
Target Start/End: Complemental strand, 33896381 - 33896284
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagc 763  Q
    ||||||||||||| |||| || ||||||| |||||||||| ||||||||| ||| | ||| | | ||| || ||||| |||||||  |||||||||||    
T  33896381 atatttattcattcaaatcgagagattacatcattcaacaccgctaaaaatgtaaaggatgaatctgcgaaaaaactcacaacatccaagttaatagc 33896284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 666 - 818
Target Start/End: Complemental strand, 34612099 - 34611946
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgt 765  Q
    ||||| ||||||| |||| || ||||||| ||||| |||||| ||||||||||| |  || | | ||| || ||||| |||||||  ||||||||||| |    
T  34612099 atattcattcattaaaatcgagagattacatcattgaacatcactaaaaacgtaaagaatgaatctgcgaacaaactcacaacatccaagttaatagcat 34612000  T
Q  766 acaacgacaaaatgtctataaata-atatgatacaattaaagtgactggaatat 818  Q
    | ||| | | |||| ||| ||| | |||||||| |||||||||||| |||||||    
T  34611999 ataacaagataatgcctacaaaaatatatgataaaattaaagtgaccggaatat 34611946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 753 - 797
Target Start/End: Original strand, 9637303 - 9637347
Alignment:
Q  753 aagttaatagcgtacaacgacaaaatgtctataaataatatgata 797  Q
    ||||||||||| ||||||||||||||| ||| |||||||||||||    
T  9637303 aagttaatagcatacaacgacaaaatgcctaaaaataatatgata 9637347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 753 - 797
Target Start/End: Original strand, 18890593 - 18890637
Alignment:
Q  753 aagttaatagcgtacaacgacaaaatgtctataaataatatgata 797  Q
    ||||||||||| ||||||||||||||| ||| |||||||||||||    
T  18890593 aagttaatagcatacaacgacaaaatgcctacaaataatatgata 18890637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 753 - 797
Target Start/End: Complemental strand, 23230838 - 23230794
Alignment:
Q  753 aagttaatagcgtacaacgacaaaatgtctataaataatatgata 797  Q
    ||||||||||| ||||||||||||||| ||| |||||||||||||    
T  23230838 aagttaatagcatacaacgacaaaatgcctacaaataatatgata 23230794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 753 - 797
Target Start/End: Original strand, 27110359 - 27110403
Alignment:
Q  753 aagttaatagcgtacaacgacaaaatgtctataaataatatgata 797  Q
    ||||||||||| |||||||| |||||||||| |||||||||||||    
T  27110359 aagttaatagcatacaacgataaaatgtctacaaataatatgata 27110403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 702 - 817
Target Start/End: Original strand, 24186504 - 24186619
Alignment:
Q  702 aacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgtacaacgacaaaatgtctataaataatatgatacaat 801  Q
    ||||||| |||||||||| | ||| | | ||| || ||||| | ||||  |||||||||||  ||| ||| ||||||| ||||||||||||||||| |||    
T  24186504 aacatcgataaaaacgtaaaagatgaatctgctaacaaactcataacacctaagttaatagtatacgacggcaaaatgcctataaataatatgataaaat 24186603  T
Q  802 taaagtgactggaata 817  Q
    | |||| |||| ||||    
T  24186604 ttaagtcactgaaata 24186619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 768 - 823
Target Start/End: Complemental strand, 35812852 - 35812797
Alignment:
Q  768 aacgacaaaatgtctataaataatatgatacaattaaagtgactggaatattcatg 823  Q
    ||||||||||| |||| ||||||||||||| ||||||||| |||| |||| |||||    
T  35812852 aacgacaaaatatctacaaataatatgataaaattaaagtcactgaaatactcatg 35812797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 753 - 796
Target Start/End: Complemental strand, 41896712 - 41896669
Alignment:
Q  753 aagttaatagcgtacaacgacaaaatgtctataaataatatgat 796  Q
    ||||||||||| ||||||||||||||| ||| ||||||||||||    
T  41896712 aagttaatagcatacaacgacaaaatgcctacaaataatatgat 41896669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 753 - 859
Target Start/End: Original strand, 20553135 - 20553241
Alignment:
Q  753 aagttaatagcgtacaacgacaaaatgtctataaataatatgatacaattaaagtgactggaatattcatgcatccgtatctataacgttgatgtccatc 852  Q
    ||||||||||| ||||||| ||||||| ||| ||||||||||||| ||   |||| || | |||| |||||| |||| ||||  |||||||| |||||      
T  20553135 aagttaatagcatacaacggcaaaatgcctacaaataatatgataaaacctaagtcaccgaaatactcatgcttccggatctgcaacgttgacgtccaaa 20553234  T
Q  853 tcattgc 859  Q
    |||||||    
T  20553235 tcattgc 20553241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 664 - 719
Target Start/End: Complemental strand, 21238074 - 21238017
Alignment:
Q  664 caatatttattcatttaaattgatagattacgtcat--tcaacatcgctaaaaacgta 719  Q
    ||||||| ||||||| ||||||||||| ||| ||||  ||||||||||||||||||||    
T  21238074 caatattcattcattcaaattgatagaatacatcataatcaacatcgctaaaaacgta 21238017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 738 - 823
Target Start/End: Original strand, 42447888 - 42447974
Alignment:
Q  738 aaacttacaacatttaagttaatagcgtacaacgacaaaatgtctataaata-atatgatacaattaaagtgactggaatattcatg 823  Q
    ||||| |||||||  ||||||||||| || |||| || |||| ||| ||| | |||||||| |||||||||| ||||||||||||||    
T  42447888 aaactcacaacatccaagttaatagcatataacggcataatgcctacaaaaatatatgataaaattaaagtgtctggaatattcatg 42447974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 738 - 823
Target Start/End: Complemental strand, 44578253 - 44578167
Alignment:
Q  738 aaacttacaacatttaagttaatagcgtacaacgacaaaatgtctataaata-atatgatacaattaaagtgactggaatattcatg 823  Q
    ||||||||| |||  ||||||||||| || ||||||| |||| ||| ||| | |||||||| |||||||||||| ||||||| ||||    
T  44578253 aaacttacatcatccaagttaatagcatataacgacataatgcctacaaaaatatatgataaaattaaagtgaccggaatatccatg 44578167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 731 - 844
Target Start/End: Complemental strand, 3673658 - 3673545
Alignment:
Q  731 tgcaaataaacttacaacatttaagttaatagcgtacaacgacaaaatgtctataaataatatgatacaattaaagtgactggaatattcatgcatccgt 830  Q
    |||||| ||||| ||| |||  ||||||||||  ||||||| ||||||| ||| ||||||||||||  || | |||| |||| |||| |||||| ||||     
T  3673658 tgcaaacaaactcacagcatccaagttaataggatacaacggcaaaatgcctacaaataatatgattaaacttaagtcactgaaatactcatgcttccgg 3673559  T
Q  831 atctataacgttga 844  Q
    ||||  ||||||||    
T  3673558 atctgcaacgttga 3673545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 666 - 719
Target Start/End: Complemental strand, 9073013 - 9072960
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgta 719  Q
    ||||| ||||||| |||| || ||||||| |||||||||| |||||||||||||    
T  9073013 atattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgta 9072960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 666 - 763
Target Start/End: Original strand, 9619146 - 9619243
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagc 763  Q
    ||||| ||||||| ||||||| | ||||| |||||||||| ||||||||||||| | ||| | | ||| || ||||| ||| |||  |||||||||||    
T  9619146 atattcattcattcaaattgagatattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaactcacagcatccaagttaatagc 9619243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 753 - 850
Target Start/End: Complemental strand, 10377884 - 10377787
Alignment:
Q  753 aagttaatagcgtacaacgacaaaatgtctataaataatatgatacaattaaagtgactggaatattcatgcatccgtatctataacgttgatgtcca 850  Q
    ||||||||||| ||||||| ||||||| ||| ||||||||||||| || | ||||  | | ||||  ||||| |||| ||||  ||||||||||||||    
T  10377884 aagttaatagcatacaacggcaaaatgcctacaaataatatgataaaacttaagtcgccgaaatacccatgcttccggatctgcaacgttgatgtcca 10377787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 686 - 763
Target Start/End: Complemental strand, 11197158 - 11197081
Alignment:
Q  686 atagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagc 763  Q
    ||||||||| ||||||||||| | |||||||||| ||||||| | || ||| ||||| ||| |||  |||||||||||    
T  11197158 atagattacatcattcaacattgttaaaaacgtaaatgataaatctgtaaacaaactcacagcatccaagttaatagc 11197081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 744 - 797
Target Start/End: Complemental strand, 29939504 - 29939451
Alignment:
Q  744 acaacatttaagttaatagcgtacaacgacaaaatgtctataaataatatgata 797  Q
    ||||||| |||||||||| | ||||||| ||||||| ||| |||||||||||||    
T  29939504 acaacatctaagttaatatcatacaacggcaaaatgactacaaataatatgata 29939451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 666 - 818
Target Start/End: Original strand, 37565668 - 37565821
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgt 765  Q
    ||||| ||||||  |||| || ||||||| |||||||||| | ||||||||||| | ||| | ||||| || ||||| ||| |||  ||||||||||| |    
T  37565668 atattcattcatgcaaatcgagagattacatcattcaacaccactaaaaacgtaaaggatgaatttgcgaacaaactcacagcatccaagttaatagcat 37565767  T
Q  766 acaacgacaaaatgtctataaata-atatgatacaattaaagtgactggaatat 818  Q
    | |||  || |||| ||| ||| | |||||||| ||| |||||||| |||||||    
T  37565768 ataacagcataatgcctacaaaaatatatgataaaatcaaagtgaccggaatat 37565821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 688 - 844
Target Start/End: Original strand, 43192158 - 43192315
Alignment:
Q  688 agattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgtacaacgacaaaatgtctataaa 787  Q
    ||||||| |||||||||| |||||||||| || | ||| | | ||| || ||||| | |||||  ||||||||||| || |||| || ||||  || |||    
T  43192158 agattacatcattcaacaccgctaaaaacataaaggatgaatctgcgaacaaactcagaacatccaagttaatagcatataacggcataatggatacaaa 43192257  T
Q  788 ta-atatgatacaattaaagtgactggaatattcatgcatccgtatctataacgttga 844  Q
     | |||||||| |||||||||||  ||||||||||||  |||| ||||  ||||||||    
T  43192258 aatatatgataaaattaaagtgatcggaatattcatgtctccggatctgcaacgttga 43192315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 700 - 797
Target Start/End: Original strand, 43833837 - 43833934
Alignment:
Q  700 tcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgtacaacgacaaaatgtctataaataatatgata 797  Q
    |||| ||||||||||| ||| ||| | | | |||||| ||||| ||| ||   ||||||||||| ||||||| ||||||| ||| |||||||||||||    
T  43833837 tcaatatcgctaaaaaagtaaatggtgaatctgcaaacaaactcacagcacccaagttaatagcatacaacggcaaaatgcctacaaataatatgata 43833934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 59; Significance: 2e-24; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 666 - 823
Target Start/End: Complemental strand, 27949718 - 27949560
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgt 765  Q
    ||||| |||||||||||| || | ||||  |||||||||| ||||||||||||| ||||| | | | | || ||||| |||||||  ||||||||||| |    
T  27949718 atattcattcatttaaatcgagatattatatcattcaacaccgctaaaaacgtaaatgatgaatctccgaacaaactcacaacatccaagttaatagcat 27949619  T
Q  766 acaacgacaaaatgtctataaata-atatgatacaattaaagtgactggaatattcatg 823  Q
    |||||| || |||||||||||| | |||||||| |||||||||||||||||||| ||||    
T  27949618 acaacgtcataatgtctataaaaatatatgataaaattaaagtgactggaatatccatg 27949560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 666 - 823
Target Start/End: Complemental strand, 8806158 - 8806000
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgt 765  Q
    ||||| ||||||| |||| || ||||||| |||||||||||||||||||||||| | ||| | | ||| || || || |||||||  ||||||||||| |    
T  8806158 atattcattcattcaaatcgagagattacatcattcaacatcgctaaaaacgtaaaggatgaatctgcgaacaatctcacaacatccaagttaatagcat 8806059  T
Q  766 acaacgacaaaatgtctataaata-atatgatacaattaaagtgactggaatattcatg 823  Q
    | |||| ||||||| ||| ||| | |||||||| |||||||||||| ||||||| ||||    
T  8806058 ataacggcaaaatgcctacaaaaatatatgataaaattaaagtgaccggaatatccatg 8806000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 666 - 824
Target Start/End: Original strand, 30923264 - 30923422
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgt 765  Q
    ||||| ||||||| ||||||||||| ||| ||||| ||||| ||||||| |||| || || | | ||| || |||||||||||||| ||||||||| | |    
T  30923264 atattcattcattcaaattgatagagtacatcatttaacattgctaaaatcgtaaataatgaatctgcgaacaaacttacaacattcaagttaatatcat 30923363  T
Q  766 acaacgacaaaatgtctataaataatatgatacaattaaagtgactggaatattcatgc 824  Q
    |||||   |||||| ||||||||||||||||| |  |||| |||||| |||| ||||||    
T  30923364 acaacataaaaatgactataaataatatgataaatataaaatgactgaaatactcatgc 30923422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 666 - 823
Target Start/End: Original strand, 21570197 - 21570355
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgt 765  Q
    ||||| ||||||| |||| || ||||||| |||||||||| |||||||||| || | | | | | ||| || ||||||||| |||| ||||||||||| |    
T  21570197 atattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacataaaggctgaatctgcgaacaaacttacagcattcaagttaatagcat 21570296  T
Q  766 acaacgacaaaatgtctataaata-atatgatacaattaaagtgactggaatattcatg 823  Q
    |||||| || |||| ||| ||| | |||||||| |||||||||||  ||||||||||||    
T  21570297 acaacggcataatgcctacaaaaatatatgataaaattaaagtgaacggaatattcatg 21570355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 666 - 822
Target Start/End: Complemental strand, 15690694 - 15690537
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtaga-tgataattttgcaaataaacttacaacatttaagttaatagcg 764  Q
    ||||| |||||||||||||||||  |||| ||||||||||||||||||||| || | |||||| | | | || ||||| |||||||| || |||| | |     
T  15690694 atattcattcatttaaattgatatgttacatcattcaacatcgctaaaaacataaattgataaatctaccaacaaactcacaacattcaaattaacaaca 15690595  T
Q  765 tacaacgacaaaatgtctataaataatatgatacaattaaagtgactggaatattcat 822  Q
    ||||||  |||||| | || |||||||||||||  ||||||||||||  |||||||||    
T  15690594 tacaacaccaaaatatttacaaataatatgataagattaaagtgacttaaatattcat 15690537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 666 - 817
Target Start/End: Original strand, 9986131 - 9986283
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgt 765  Q
    ||||| ||||||  |||| || ||||||| |||||||||| ||||||||||||| | ||| | | ||| || ||||| |||||||  ||||||||||| |    
T  9986131 atattcattcatccaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaactcacaacatccaagttaatagcat 9986230  T
Q  766 acaacgacaaaatgtctataaata-atatgatacaattaaagtgactggaata 817  Q
    | ||||||| |||| ||| ||| | |||||||| |||||||||||| ||||||    
T  9986231 ataacgacataatgcctacaaaaatatatgataaaattaaagtgaccggaata 9986283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 666 - 844
Target Start/End: Original strand, 41712578 - 41712758
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgt 765  Q
    ||||| ||||||||||||||| | ||||| |||||||||||| ||||||| ||| ||||||| | ||| || ||||| |||| || |||||||||| | |    
T  41712578 atattcattcatttaaattgaaaaattacatcattcaacatcactaaaaatgtaaatgataaatctgcgaacaaactcacaatatataagttaataacat 41712677  T
Q  766 acaacgacaaaatgtctataaata-atatgatacaattaaagtgactggaatattcat-gcatccgtatctataacgttga 844  Q
    | |||  || |||  ||| ||| | |||||||| ||||||| |||| ||||||||||| || |||||||||  ||||||||    
T  41712678 ataactgcataatacctacaaaaatatatgataaaattaaaatgaccggaatattcatggcctccgtatctgcaacgttga 41712758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 666 - 850
Target Start/End: Original strand, 20046871 - 20047057
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgt 765  Q
    ||||| |||||||||||| || ||||||| |||||||||| ||||||||||||| | ||| | | ||| || ||| | ||| |||  |||||||||   |    
T  20046871 atattcattcatttaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaaatcacagcatccaagttaataagat 20046970  T
Q  766 acaacgacaaaatgtctataaata-atatgatacaattaaagtgactggaatattcat-gcatccgtatctataacgttgatgtcca 850  Q
    | ||||||| |||| ||| ||| | |||||||| ||||||||| || ||||||||||| || |||| ||||  ||||||||||||||    
T  20046971 ataacgacataatgcctacaaaaatatatgataaaattaaagtcaccggaatattcatggcctccggatctgcaacgttgatgtcca 20047057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 738 - 797
Target Start/End: Original strand, 4904027 - 4904086
Alignment:
Q  738 aaacttacaacatttaagttaatagcgtacaacgacaaaatgtctataaataatatgata 797  Q
    ||||| |||||||  ||||||||||| ||||||||||||||||||| |||||||||||||    
T  4904027 aaactcacaacatccaagttaatagcatacaacgacaaaatgtctacaaataatatgata 4904086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 721 - 796
Target Start/End: Complemental strand, 7604411 - 7604336
Alignment:
Q  721 atgataattttgcaaataaacttacaacatttaagttaatagcgtacaacgacaaaatgtctataaataatatgat 796  Q
    ||||||| |||||||| ||| |||||||||  ||||||||||| ||||| || ||||||||||| |||||||||||    
T  7604411 atgataagtttgcaaacaaatttacaacatccaagttaatagcatacaatgataaaatgtctatgaataatatgat 7604336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 672 - 810
Target Start/End: Complemental strand, 10548470 - 10548333
Alignment:
Q  672 attcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgtacaacg 771  Q
    ||||||||| ||||||||  ||  ||||||||||| ||||||| | || ||| | | |||| ||| ||||| |||||||  ||||||||| | ||||||     
T  10548470 attcatttatattgatagggtatatcattcaacattgctaaaa-cataaatggtcaatttgtaaacaaactcacaacatccaagttaataacatacaaca 10548372  T
Q  772 acaaaatgtctataaataatatgatacaattaaagtgac 810  Q
    |||||||| ||||||||||| ||| | ||||||||||||    
T  10548371 acaaaatgcctataaataatttgagaaaattaaagtgac 10548333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 666 - 807
Target Start/End: Complemental strand, 41431320 - 41431178
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgt 765  Q
    ||||| ||||||| |||| || ||||||| | |||||||| ||||||||||||| | ||||| | ||| |||||||| |||||||  ||||||||||  |    
T  41431320 atattcattcattcaaatcgagagattacattattcaacaccgctaaaaacgtaaaggataaatctgcgaataaactcacaacatccaagttaatagtat 41431221  T
Q  766 acaacgacaaaatgtctataaata-atatgatacaattaaagt 807  Q
    | |||| || |||| ||| ||| | |||||||| |||||||||    
T  41431220 ataacggcataatgcctacaaaaatatatgataaaattaaagt 41431178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 699 - 797
Target Start/End: Complemental strand, 41694877 - 41694780
Alignment:
Q  699 ttcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgtacaacgacaaaatgtctataaataatatgata 797  Q
    ||||||||||||||||||||| ||||| | ||||  || ||||||| ||||   ||||||||| | || |||||||||||| |||||||||||||||||    
T  41694877 ttcaacatcgctaaaaacgtaaatgatgaatttgtgaacaaactta-aacaccaaagttaataacatataacgacaaaatgcctataaataatatgata 41694780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 700 - 797
Target Start/End: Original strand, 17248991 - 17249088
Alignment:
Q  700 tcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgtacaacgacaaaatgtctataaataatatgata 797  Q
    |||| ||||||||||||||| ||||| | | ||| || ||||| ||| ||   ||||||||||| ||||||| ||||||||||| |||||||||||||    
T  17248991 tcaagatcgctaaaaacgtaaatgatgaatctgcgaacaaactcacagcacccaagttaatagcatacaacggcaaaatgtctacaaataatatgata 17249088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 666 - 763
Target Start/End: Original strand, 40625846 - 40625943
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagc 763  Q
    ||||| || |||| |||| || ||||||| |||||||||||||||||||||||| ||||| | | ||| || ||||| | |||||| |||||||||||    
T  40625846 atattcatccattcaaatcgagagattacatcattcaacatcgctaaaaacgtaaatgatgaatctgcgaacaaactcataacattcaagttaatagc 40625943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 666 - 823
Target Start/End: Complemental strand, 4228415 - 4228256
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgt 765  Q
    ||||| ||||||| |||| || ||||||| |||||||||| ||||||||| ||| | ||| | | ||| || ||||| |||||||  ||||||||||| |    
T  4228415 atattcattcattcaaatcgagagattacatcattcaacaccgctaaaaatgtaaaggatgaatctgcgaacaaactcacaacatccaagttaatagcat 4228316  T
Q  766 acaacgacaaaatgtctataaata-atatgat-acaattaaagtgactggaatattcatg 823  Q
    | ||||||| |||| ||| ||| | ||||||| | |||||||||||  ||||||| ||||    
T  4228315 ataacgacataatgcctacaaaaatatatgataaaaattaaagtgatcggaatatccatg 4228256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 672 - 818
Target Start/End: Original strand, 8971423 - 8971570
Alignment:
Q  672 attcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgtacaacg 771  Q
    ||||||| |||| || ||||||| |||||||||| |||||| || ||| | ||| | | ||| || ||||| ||| |||  ||||||||||| || ||||    
T  8971423 attcattcaaatcgagagattacatcattcaacaccgctaagaatgtaaaggatgaatatgcgaacaaactcacagcatccaagttaatagcatataacg 8971522  T
Q  772 acaaaatgtctataaata-atatgatacaattaaagtgactggaatat 818  Q
     || |||||||| ||| | |||||||| |||||||||||| |||||||    
T  8971523 gcataatgtctacaaaaatatatgataaaattaaagtgaccggaatat 8971570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 731 - 850
Target Start/End: Complemental strand, 10929890 - 10929771
Alignment:
Q  731 tgcaaataaacttacaacatttaagttaatagcgtacaacgacaaaatgtctataaataatatgatacaattaaagtgactggaatattcatgcatccgt 830  Q
    |||||| ||||| ||| |||  ||||||||||| | |||| |||||||| ||||||||||||||||| |||| || | ||  |||||  ||||| ||||     
T  10929890 tgcaaacaaactcacagcatccaagttaatagcattcaacaacaaaatgcctataaataatatgataaaatttaaatcaccagaatacacatgcttccgg 10929791  T
Q  831 atctataacgttgatgtcca 850  Q
    ||||  ||||||||||||||    
T  10929790 atctgcaacgttgatgtcca 10929771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 702 - 797
Target Start/End: Original strand, 11985079 - 11985174
Alignment:
Q  702 aacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgtacaacgacaaaatgtctataaataatatgata 797  Q
    |||||||||||||||||| ||||| | ||||| || ||| | |||||||  ||||||||||  ||||||  ||||||| ||| |||||||||||||    
T  11985079 aacatcgctaaaaacgtaaatgatgaatttgcgaacaaattcacaacatccaagttaataggatacaacagcaaaatgcctacaaataatatgata 11985174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 731 - 797
Target Start/End: Complemental strand, 1421901 - 1421835
Alignment:
Q  731 tgcaaataaacttacaacatttaagttaatagcgtacaacgacaaaatgtctataaataatatgata 797  Q
    |||||| ||||| ||||||   ||||||||||| ||||||||||||||| ||| |||||||||||||    
T  1421901 tgcaaacaaactcacaacacccaagttaatagcatacaacgacaaaatgcctacaaataatatgata 1421835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 667 - 850
Target Start/End: Original strand, 83971 - 84156
Alignment:
Q  667 tatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgta 766  Q
    |||| ||||||| |||| || | ||||| |||||||||| ||||||||||||| | ||| | | ||| || ||||| ||| |||  ||||||||||| ||    
T  83971 tattcattcattcaaatcgagatattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaactcacagcatccaagttaatagcata 84070  T
Q  767 caacgacaaaatgtcta-taaataatatgatacaattaaagtgactggaatattcatg-catccgtatctataacgttgatgtcca 850  Q
     |||| || |||| |||  |||  |||||||| |||||||||| | ||||||| |||| |||||| ||||  |||||||| |||||    
T  84071 taacggcataatgcctacgaaaatatatgataaaattaaagtggccggaatatccatgacatccggatctgcaacgttgacgtcca 84156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 753 - 850
Target Start/End: Complemental strand, 7646681 - 7646584
Alignment:
Q  753 aagttaatagcgtacaacgacaaaatgtctataaataatatgatacaattaaagtgactggaatattcatgcatccgtatctataacgttgatgtcca 850  Q
    ||||||||||| ||||||| ||||||| ||| ||||||||||||| || | |||| || | |||| |||||| |||| ||||  |||||||| |||||    
T  7646681 aagttaatagcatacaacggcaaaatgcctacaaataatatgataaaacttaagtcaccgaaatactcatgcttccggatctgcaacgttgacgtcca 7646584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 753 - 834
Target Start/End: Original strand, 22538204 - 22538285
Alignment:
Q  753 aagttaatagcgtacaacgacaaaatgtctataaataatatgatacaattaaagtgactggaatattcatgcatccgtatct 834  Q
    ||||||||||| | |||||||||||| | || ||||||||||||| |||| |||| || | ||||||||||| ||| |||||    
T  22538204 aagttaatagcatgcaacgacaaaatatttacaaataatatgataaaatttaagtcacagaaatattcatgcttccatatct 22538285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 666 - 818
Target Start/End: Original strand, 27248940 - 27249093
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgt 765  Q
    ||||| ||||||| |||| || ||||||  |||||||||| ||||||||||||| | ||| | | ||| || ||||| |||||||  ||||||||||| |    
T  27248940 atattcattcattcaaatcgagagattatatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaactcacaacatccaagttaatagcat 27249039  T
Q  766 acaacgacaaaatgtctataaata-atatgatacaattaaagtgactggaatat 818  Q
    | |||| || ||||  || ||| | |||||||  |||||||||||| |||||||    
T  27249040 ataacggcataatgcgtacaaaaatatatgatgaaattaaagtgaccggaatat 27249093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 667 - 788
Target Start/End: Original strand, 39284354 - 39284475
Alignment:
Q  667 tatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgta 766  Q
    |||||||||||| ||||||||| ||||| |||||||| |||| ||||||  || || || | ||||| || ||||| | || ||| ||||||| | | ||    
T  39284354 tatttattcattcaaattgatatattacatcattcaatatcgttaaaaatataaataatgaatttgcgaacaaactcataatattcaagttaacaacata 39284453  T
Q  767 caacgacaaaatgtctataaat 788  Q
    |||||| |||||||||| ||||    
T  39284454 caacgataaaatgtctacaaat 39284475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 700 - 796
Target Start/End: Original strand, 10237060 - 10237156
Alignment:
Q  700 tcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgtacaacgacaaaatgtctataaataatatgat 796  Q
    |||| ||||||||||||||| | | | | | ||| || ||||| ||||||   ||||||||||| ||||||||||||||| ||| ||||||||||||    
T  10237060 tcaatatcgctaaaaacgtatagggtgaatctgcgaacaaactcacaacacccaagttaatagcatacaacgacaaaatgcctacaaataatatgat 10237156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 774 - 850
Target Start/End: Complemental strand, 13141667 - 13141591
Alignment:
Q  774 aaaatgtctataaataatatgatacaattaaagtgactggaatattcatgcatccgtatctataacgttgatgtcca 850  Q
    ||||| |||| ||||||||||||| | | |||||| ||||||||||||||| || | ||||| |||||||| |||||    
T  13141667 aaaatatctacaaataatatgataaactaaaagtggctggaatattcatgcttcagaatctacaacgttgacgtcca 13141591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 786 - 826
Target Start/End: Complemental strand, 34124622 - 34124582
Alignment:
Q  786 aataatatgatacaattaaagtgactggaatattcatgcat 826  Q
    |||||||||||| ||||||||||| ||||||||||||||||    
T  34124622 aataatatgataaaattaaagtgattggaatattcatgcat 34124582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 702 - 797
Target Start/End: Original strand, 7677719 - 7677814
Alignment:
Q  702 aacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgtacaacgacaaaatgtctataaataatatgata 797  Q
    |||||||||||||||||| | | | |  ||||||| ||||| ||| ||   ||||||||||| ||||||| ||||||| ||| |||||||||||||    
T  7677719 aacatcgctaaaaacgtaaaaggtgaacttgcaaacaaactcacagcacccaagttaatagcatacaacggcaaaatgcctaaaaataatatgata 7677814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 666 - 725
Target Start/End: Original strand, 13718959 - 13719018
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgat 725  Q
    ||||| ||||||| ||| ||||||| | | |||||||||||||||||||||||| |||||    
T  13718959 atattcattcattcaaaatgatagagtgcatcattcaacatcgctaaaaacgtaaatgat 13719018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 653 - 796
Target Start/End: Complemental strand, 24461745 - 24461603
Alignment:
Q  653 caaaattaaatcaatatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacattt 752  Q
    ||||| |||| | ||||| ||||||| ||||||||||| ||| | || ||||||||||||||||||| | ||| |   ||| || ||||| ||||||       
T  24461745 caaaaataaaacgatattcattcattcaaattgatagaatacataat-caacatcgctaaaaacgtaaaggatgaacctgcgaacaaactcacaacacca 24461647  T
Q  753 aagttaatagcgtacaacgacaaaatgtctataaataatatgat 796  Q
    ||||||||||| || |||||||||||  ||| ||| ||||||||    
T  24461646 aagttaatagcatataacgacaaaatacctacaaaaaatatgat 24461603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 738 - 797
Target Start/End: Original strand, 28533836 - 28533895
Alignment:
Q  738 aaacttacaacatttaagttaatagcgtacaacgacaaaatgtctataaataatatgata 797  Q
    ||||| |||||| | ||||||||||| ||||||||||||||  ||| |||||||||||||    
T  28533836 aaactcacaacactcaagttaatagcatacaacgacaaaatacctacaaataatatgata 28533895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 738 - 797
Target Start/End: Original strand, 32448498 - 32448557
Alignment:
Q  738 aaacttacaacatttaagttaatagcgtacaacgacaaaatgtctataaataatatgata 797  Q
    ||||| |||||||  ||||||||||| ||||||| ||||||| ||| |||||||||||||    
T  32448498 aaactcacaacatccaagttaatagcatacaacggcaaaatgcctacaaataatatgata 32448557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 753 - 823
Target Start/End: Original strand, 33229016 - 33229087
Alignment:
Q  753 aagttaatagcgtacaacgacaaaatgtctataaata-atatgatacaattaaagtgactggaatattcatg 823  Q
    ||||||||||| || ||||||| |||| ||| ||| | |||||||| |||||||||||||||||||| ||||    
T  33229016 aagttaatagcatataacgacataatgcctacaaaaatatatgataaaattaaagtgactggaatatccatg 33229087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 666 - 823
Target Start/End: Original strand, 7015500 - 7015658
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgt 765  Q
    ||||||||||||| |||| || ||||||| ||||||||||  ||||||||||||    || | | ||| || ||||| ||| |||  ||||||||||| |    
T  7015500 atatttattcattcaaatcgagagattacatcattcaacacagctaaaaacgtaacgaatgaatctgcgaacaaactcacagcatccaagttaatagcat 7015599  T
Q  766 acaacgacaaaatgtctataaata-atatgatacaattaaagtgactggaatattcatg 823  Q
    | |||| || |||| ||| ||| | |||||||| |||||||| ||| ||||||| ||||    
T  7015600 ataacggcataatgcctacaaaaatatatgataaaattaaagcgacgggaatatccatg 7015658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 700 - 797
Target Start/End: Complemental strand, 19598095 - 19597998
Alignment:
Q  700 tcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgtacaacgacaaaatgtctataaataatatgata 797  Q
    ||||||| || ||||||||| ||||  | | ||| || ||| | |||||| | ||||||||||| |||||||  |||||||||| |||||||||||||    
T  19598095 tcaacattgcaaaaaacgtaaatgaanaatatgcgaacaaattcacaacactcaagttaatagcatacaacggtaaaatgtctacaaataatatgata 19597998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 731 - 769
Target Start/End: Complemental strand, 32190889 - 32190851
Alignment:
Q  731 tgcaaataaacttacaacatttaagttaatagcgtacaa 769  Q
    |||||||||||| |||||||||||||||||||| |||||    
T  32190889 tgcaaataaactcacaacatttaagttaatagcatacaa 32190851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 699 - 797
Target Start/End: Original strand, 33760036 - 33760134
Alignment:
Q  699 ttcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgtacaacgacaaaatgtctataaataatatgata 797  Q
    ||||||||||||||||||||| | ||| | | || ||| ||||| ||| ||   ||||||||||| ||||||  ||||||| ||| |||||||||||||    
T  33760036 ttcaacatcgctaaaaacgtaaaggatgagtctgtaaacaaactaacagcacacaagttaatagcttacaacagcaaaatgcctacaaataatatgata 33760134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 666 - 715
Target Start/End: Complemental strand, 8308387 - 8308338
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaa 715  Q
    ||||| ||||||| |||| |||||||||| || |||||||||||||||||    
T  8308387 atattcattcattcaaatcgatagattacatcgttcaacatcgctaaaaa 8308338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 738 - 783
Target Start/End: Complemental strand, 8809497 - 8809452
Alignment:
Q  738 aaacttacaacatttaagttaatagcgtacaacgacaaaatgtcta 783  Q
    ||||| |||||||  ||||||||||| |||||||||||||||||||    
T  8809497 aaactcacaacatccaagttaatagcatacaacgacaaaatgtcta 8809452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 680 - 805
Target Start/End: Complemental strand, 23903619 - 23903494
Alignment:
Q  680 aaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgtacaacgacaaaatg 779  Q
    ||||||||||||||| |||||||| |||| |||||| | | | ||| | ||||| || ||||| || || |  |||||| || | |||||||||||||||    
T  23903619 aaattgatagattacatcattcaagatcgttaaaaatggaaaggatgagtttgcgaacaaactcacgacttccaagttagtatcatacaacgacaaaatg 23903520  T
Q  780 tctataaataatatgatacaattaaa 805  Q
    |  | || |||||||||| |||||||    
T  23903519 ttgacaactaatatgataaaattaaa 23903494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 666 - 763
Target Start/End: Complemental strand, 30420961 - 30420864
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagc 763  Q
    ||||| ||||||| |||| || ||||||| |||||||||| ||||||||| ||| | ||| | | ||| || ||||| |||||||  |||||||||||    
T  30420961 atattcattcattcaaatcgagagattacatcattcaacaccgctaaaaatgtaaaggatgaatctgcgaacaaactcacaacatccaagttaatagc 30420864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 702 - 859
Target Start/End: Complemental strand, 31788710 - 31788553
Alignment:
Q  702 aacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgtacaacgacaaaatgtctataaataatatgatacaat 801  Q
    |||||||||||||||||| | | | | | ||| || ||||| ||| |||  ||||||||||| ||||||| ||||||| ||| |||||||||| || ||     
T  31788710 aacatcgctaaaaacgtaaagggtgaatctgcgaacaaactcacagcatccaagttaatagcatacaacggcaaaatgcctacaaataatatgttaaaac 31788611  T
Q  802 taaagtgactggaatattcatgcatccgtatctataacgttgatgtccatctcattgc 859  Q
      |||| |||| |||| |||||| | || ||||  |||||||| |||||  |||||||    
T  31788610 ctaagtcactgaaatactcatgctttcggatctgcaacgttgacgtccaaatcattgc 31788553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 666 - 719
Target Start/End: Complemental strand, 36234290 - 36234237
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgta 719  Q
    ||||| ||||||| |||| || ||||||| |||||||||| |||||||||||||    
T  36234290 atattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgta 36234237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 666 - 818
Target Start/End: Original strand, 38575275 - 38575427
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgt 765  Q
    ||||| ||||||| |||| || ||||||| |||||||||| |||||||| | || | ||| | | ||| || ||||| |||||||  ||| ||||||| |    
T  38575275 atattcattcattcaaatcgagagattacatcattcaacaccgctaaaa-cataaaggatgaatctgcgaacaaactcacaacatccaagataatagcat 38575373  T
Q  766 acaacgacaaaatgtctataaata-atatgatacaattaaagtgactggaatat 818  Q
    | ||||||| |||| ||| ||| | |||||||  |||||||||||| |||||||    
T  38575374 ataacgacataatgcctacaaaaatatatgatgaaattaaagtgaccggaatat 38575427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 52; Significance: 2e-20; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 676 - 815
Target Start/End: Original strand, 34581 - 34720
Alignment:
Q  676 atttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgtacaacgacaa 775  Q
    ||||||||||||| | ||  ||||||||||||  ||||||  |||| ||| | | ||| || ||||||||||||| ||||||||  || |||||| ||||    
T  34581 atttaaattgatataatagatcattcaacatcaataaaaatatagaggatgaatctgcgaacaaacttacaacatctaagttaaaggcatacaacaacaa 34680  T
Q  776 aatgtctataaataatatgatacaattaaagtgactggaa 815  Q
    |||| ||| ||||||||||||| |||||||||||||||||    
T  34681 aatgcctacaaataatatgataaaattaaagtgactggaa 34720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 52; Significance: 2e-20; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 666 - 817
Target Start/End: Complemental strand, 5856192 - 5856041
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgt 765  Q
    ||||| ||||||| ||||||||||| ||| || ||||| || | |||||| ||| ||||| | ||||  || ||| || ||||||| ||||||||||| |    
T  5856192 atattcattcattcaaattgatagagtacatcgttcaatattgttaaaaaagtaaatgatgaatttgtgaacaaatttgcaacattcaagttaatagcat 5856093  T
Q  766 acaacgacaaaatgtctataaataatatgatacaattaaagtgactggaata 817  Q
    |||||| |||||| |||| |||||||||| || ||||||||||| |||||||    
T  5856092 acaacggcaaaatttctacaaataatatggtaaaattaaagtgattggaata 5856041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 666 - 844
Target Start/End: Original strand, 38520324 - 38520503
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgt 765  Q
    ||||| ||||||||||||||| | ||||| |||||||||||| ||||||||||| | ||| | ||||  || ||||| |||||||  ||||||||||| |    
T  38520324 atattcattcatttaaattgagaaattacatcattcaacatcactaaaaacgtaaaggatgaatttgtgaacaaactcacaacatccaagttaatagcat 38520423  T
Q  766 acaacgacaaaatgtctataaata-atatgatacaattaaagtgactggaatattcatgcatccgtatctataacgttga 844  Q
    | ||||  | |||| ||| ||| | ||| |||| |||||||||||||||||||| ||||| |||| ||||  ||||||||    
T  38520424 ataacggtataatgcctacaaaaatatacgataaaattaaagtgactggaatatccatgcctccgaatctgcaacgttga 38520503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 666 - 823
Target Start/End: Original strand, 9686994 - 9687152
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgt 765  Q
    ||||| ||||||| |||| || | ||||| |||||||||| ||||||||||||| | ||| | | ||| || ||||| ||| |||  ||||||||||| |    
T  9686994 atattcattcattcaaatcgagatattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaactcacatcatccaagttaatagcat 9687093  T
Q  766 acaacgacaaaatgtctataaata-atatgatacaattaaagtgactggaatattcatg 823  Q
    | ||||||| |||| ||| ||| | |||||||| |||||||||||| ||||||||||||    
T  9687094 ataacgacataatgcctacaaaaatatatgataaaattaaagtgaccggaatattcatg 9687152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 666 - 823
Target Start/End: Original strand, 45425855 - 45426013
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgt 765  Q
    ||||| ||||||| ||||||| ||||||| ||||| || ||||||||||||||| ||||| | | ||| |||||||| ||| |||  ||||||||||| |    
T  45425855 atattcattcattcaaattgagagattacatcatttaatatcgctaaaaacgtaaatgatgaatctgcgaataaactcacagcatccaagttaatagcat 45425954  T
Q  766 acaacgacaaaatgtctataaata-atatgatacaattaaagtgactggaatattcatg 823  Q
    | ||||  | |||| ||| ||| | |||||||| |||||||||||| | ||||||||||    
T  45425955 ataacggtataatgcctacaaaaatatatgataaaattaaagtgaccgaaatattcatg 45426013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 665 - 822
Target Start/End: Original strand, 50271928 - 50272086
Alignment:
Q  665 aatatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcg 764  Q
    |||||||||||||| |||| || | ||||| |||||||||| ||||||||| |||   ||| | | ||| || ||||| ||||||| ||||||||||||     
T  50271928 aatatttattcattcaaatcgagatattacatcattcaacaccgctaaaaaggtaacggatgaatctgcgaacaaactcacaacatctaagttaatagca 50272027  T
Q  765 tacaacgacaaaatgtctataaata-atatgatacaattaaagtgactggaatattcat 822  Q
    || |||| || |||| ||| ||| | |||||| | ||||||||||||||||||||||||    
T  50272028 tataacggcataatgcctacaaaaatatatgacaaaattaaagtgactggaatattcat 50272086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 666 - 818
Target Start/End: Original strand, 19715684 - 19715837
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgt 765  Q
    ||||| ||||||||||||||| ||||||| |||||||||| ||||||||||||| | ||| | | ||| |||||||| ||| |||  ||||||||||| |    
T  19715684 atattcattcatttaaattgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaataaactcacagcatccaagttaatagcat 19715783  T
Q  766 acaacgacaaaatgtctataaata-atatgatacaattaaagtgactggaatat 818  Q
    | |||  || |||| ||| ||| | |||||||  |||||||||||| |||||||    
T  19715784 ataacagcataatgcctacaaaaatatatgatgaaattaaagtgaccggaatat 19715837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 666 - 823
Target Start/End: Complemental strand, 51872155 - 51871997
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgt 765  Q
    ||||| ||||||| ||||||| ||||||| || ||||||| ||||||||||||| | ||| | | ||| || ||||| ||| |||  ||||||||||| |    
T  51872155 atattcattcattcaaattgagagattacatccttcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaactcacagcatccaagttaatagcat 51872056  T
Q  766 acaacgacaaaatgtctataaata-atatgatacaattaaagtgactggaatattcatg 823  Q
    | ||||||| |||| ||| ||| | |||||||| ||||||||| || ||||||| ||||    
T  51872055 ataacgacataatgcctacaaaaatatatgataaaattaaagtcaccggaatatccatg 51871997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 667 - 823
Target Start/End: Original strand, 5324349 - 5324505
Alignment:
Q  667 tatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgta 766  Q
    |||| |||||||||||| || ||||||| |||||||||||||||||||||||| |  || | | ||| ||  |||| |||||||  ||||||||||| ||    
T  5324349 tattcattcatttaaatcgagagattacatcattcaacatcgctaaaaacgtaaagcatgaatctgcgaa-caactcacaacatccaagttaatagcata 5324447  T
Q  767 caacgacaaaatgtctataaata-atatgatacaattaaagtgactggaatattcatg 823  Q
     ||||||| |||| ||| ||| | |||||||| |||||||||||| | ||||| ||||    
T  5324448 taacgacataatgcctacaaaaatatatgataaaattaaagtgaccgaaatatccatg 5324505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 666 - 796
Target Start/End: Complemental strand, 47133188 - 47133056
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcat--tcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagc 763  Q
    ||||| ||||||| ||||||||||| ||| |||   |||||||||||||||||||| | ||||| | ||| || ||||| |||||||  |||||||||||    
T  47133188 atattcattcattcaaattgatagaatacatcagaatcaacatcgctaaaaacgtaaaggataaatctgcgaacaaactcacaacatccaagttaatagc 47133089  T
Q  764 gtacaacgacaaaatgtctataaataatatgat 796  Q
     || |||| ||||||| ||| ||| ||||||||    
T  47133088 atataacggcaaaatgcctacaaaaaatatgat 47133056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 706 - 797
Target Start/End: Complemental strand, 31919232 - 31919141
Alignment:
Q  706 tcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgtacaacgacaaaatgtctataaataatatgata 797  Q
    |||||||||||||| | ||| | | ||| || |||||  ||||||  ||||||||||| ||||||||||||||||||| |||||||||||||    
T  31919232 tcgctaaaaacgtaaaggatgaatctgcgaacaaactcgcaacatccaagttaatagcatacaacgacaaaatgtctacaaataatatgata 31919141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 673 - 818
Target Start/End: Complemental strand, 50148655 - 50148509
Alignment:
Q  673 ttcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgtacaacga 772  Q
    |||||| |||| || ||||||| |||||||||||||||||||| ||| | ||| | | ||| ||  |||| |||||||  ||||||||||| || |||||    
T  50148655 ttcattcaaatcgagagattacatcattcaacatcgctaaaaatgtaaaggatgaatctgcgaaacaactcacaacatccaagttaatagcatataacga 50148556  T
Q  773 caaaatgtctataaata-atatgatacaattaaagtgactggaatat 818  Q
    || |||| ||| ||| | |||||||  |||||||||||| |||||||    
T  50148555 cataatgcctacaaaaatatatgatgaaattaaagtgaccggaatat 50148509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 666 - 807
Target Start/End: Original strand, 50165888 - 50166030
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgt 765  Q
    ||||| |||||||||||| || ||||||| |||||||||| ||||||||||||| | ||| | | ||  || ||||| |||||||  ||||||||||| |    
T  50165888 atattcattcatttaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgtgaacaaactcacaacatccaagttaatagcat 50165987  T
Q  766 acaacgacaaaatgtctataaata-atatgatacaattaaagt 807  Q
    | |||| || |||| ||| ||| | |||||||| |||||||||    
T  50165988 ataacggcataatgcctacaaaaatatatgataaaattaaagt 50166030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 666 - 823
Target Start/End: Original strand, 51868434 - 51868592
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgt 765  Q
    ||||| ||||||| |||| || ||||||| |||||||||| ||||||||||||| | ||| | ||||| || ||||| ||| |||  ||||||||| | |    
T  51868434 atattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatttgcgaacaaactcacagcatccaagttaataacat 51868533  T
Q  766 acaacgacaaaatgtctataaata-atatgatacaattaaagtgactggaatattcatg 823  Q
    | |||| || |||| ||| ||| | |||||||| ||||||||| |  ||||||||||||    
T  51868534 ataacggcataatgcctacaaaaatatatgataaaattaaagtcatcggaatattcatg 51868592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 666 - 807
Target Start/End: Original strand, 799641 - 799780
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgt 765  Q
    ||||||||| ||||||||||||| | ||| ||||||||||||  |||||||||| ||||| | | ||  || |||||  |||||| | |||||||||| |    
T  799641 atatttattgatttaaattgataaagtacatcattcaacatcattaaaaacgtaaatgatgaatatgtgaacaaactcgcaacatct-agttaatagcat 799739  T
Q  766 acaacgacaaaatgtctataaataatatgatacaattaaagt 807  Q
    |||| || ||||| |||| ||||||||||||| |||| ||||    
T  799740 acaatga-aaaatatctacaaataatatgataaaattgaagt 799780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 666 - 818
Target Start/End: Complemental strand, 9172782 - 9172629
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgt 765  Q
    ||||| ||||||| ||||||| ||||||| |||||||||| ||||||||||||| | ||| | | ||| || ||||| ||| |||  |||||||||||      
T  9172782 atattcattcattcaaattgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaactcacatcatccaagttaatagcaa 9172683  T
Q  766 acaacgacaaaatgtctataaata-atatgatacaattaaagtgactggaatat 818  Q
    | | || || |||| ||||||| | |||||||| ||||||||| || |||||||    
T  9172682 atagcggcataatgcctataaaaatatatgataaaattaaagtcaccggaatat 9172629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 666 - 818
Target Start/End: Complemental strand, 9180764 - 9180611
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgt 765  Q
    ||||| ||||||| ||||||| ||||||| |||||||||| ||||||||||||| | ||| | | ||| || ||||| ||| |||  |||||||||||      
T  9180764 atattcattcattcaaattgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaactcacatcatccaagttaatagcaa 9180665  T
Q  766 acaacgacaaaatgtctataaata-atatgatacaattaaagtgactggaatat 818  Q
    | | || || |||| ||||||| | |||||||| ||||||||| || |||||||    
T  9180664 atagcggcataatgcctataaaaatatatgataaaattaaagtcaccggaatat 9180611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 666 - 763
Target Start/End: Complemental strand, 11454229 - 11454132
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagc 763  Q
    ||||||||||||| |||| || ||||||| |||||||||| ||||||||||||| | ||| | | ||| || ||||| |||||||  |||||||||||    
T  11454229 atatttattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaactcacaacatccaagttaatagc 11454132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 666 - 818
Target Start/End: Original strand, 11709496 - 11709649
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgt 765  Q
    ||||| ||||||| |||| || ||||||| |||||||||| | ||||||||||| | ||| | | ||| || ||||| ||||||| ||| |||||||| |    
T  11709496 atattcattcattcaaatcgagagattacatcattcaacaccactaaaaacgtaaaggatgaatctgcgaacaaactcacaacatctaaattaatagcat 11709595  T
Q  766 acaacgacaaaatgtctataaata-atatgatacaattaaagtgactggaatat 818  Q
    |  ||| || |||| ||| ||| | |||||||| |||||||||||| |||||||    
T  11709596 atcacggcataatgcctacaaaaatatatgataaaattaaagtgaccggaatat 11709649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 666 - 818
Target Start/End: Original strand, 33291207 - 33291360
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgt 765  Q
    ||||| |||||||||||| || ||||||| |||||||||| |  |||||||||| ||||| | | ||| || ||||| ||| |||  ||||||| ||| |    
T  33291207 atattcattcatttaaatcgagagattacatcattcaacaccaataaaaacgtaaatgatgaatctgctaacaaactcacagcatccaagttaacagcat 33291306  T
Q  766 acaacgacaaaatgtctataaata-atatgatacaattaaagtgactggaatat 818  Q
    | ||| ||| |||| ||| ||| | |||||||| |||||||||||| |||||||    
T  33291307 ataacaacataatgcctacaaaaatatatgataaaattaaagtgaccggaatat 33291360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 675 - 818
Target Start/End: Complemental strand, 5701542 - 5701398
Alignment:
Q  675 catttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgtacaacgaca 774  Q
    |||| ||||||| ||||||| |||||||||| ||||||||||||| | ||| | | ||| || ||||| |||||||  ||||||||||| || |||| ||    
T  5701542 cattcaaattgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaactcacaacatccaagttaatagcatataacggca 5701443  T
Q  775 aaatgtctata-aataatatgatacaattaaagtgactggaatat 818  Q
     |||| ||| | ||  |||||||  |||||||||||| |||||||    
T  5701442 taatgcctacacaaatatatgatgaaattaaagtgaccggaatat 5701398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 702 - 797
Target Start/End: Original strand, 15431511 - 15431606
Alignment:
Q  702 aacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgtacaacgacaaaatgtctataaataatatgata 797  Q
    ||||| |||||||||||| | ||| | | ||| || ||||| |||||||  |||| |||||| |||||||| |||||||||| |||||||||||||    
T  15431511 aacattgctaaaaacgtaaaggatgaatctgcgaacaaactcacaacatccaagtgaatagcatacaacgataaaatgtctacaaataatatgata 15431606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 753 - 812
Target Start/End: Complemental strand, 46399166 - 46399107
Alignment:
Q  753 aagttaatagcgtacaacgacaaaatgtctataaataatatgatacaattaaagtgactg 812  Q
    ||||||||| | |||||| ||||||||| |||||||||||||||| ||||||||| ||||    
T  46399166 aagttaataacatacaacaacaaaatgtttataaataatatgatataattaaagtaactg 46399107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 666 - 823
Target Start/End: Complemental strand, 7343014 - 7342856
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgt 765  Q
    ||||| ||||||| |||| || ||||||| ||| |||||| ||||||||||||| | ||| | | ||| || ||||| ||| |||  ||||||||||| |    
T  7343014 atattcattcattcaaatcgagagattacatcactcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaactcacagcatccaagttaatagcat 7342915  T
Q  766 acaacgacaaaatgtctataaata-atatgatacaattaaagtgactggaatattcatg 823  Q
    | |||  || |||| ||||||| | |||||||| ||||||||| || ||||||| ||||    
T  7342914 ataacatcataatgcctataaaaatatatgataaaattaaagtcaccggaatatccatg 7342856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 666 - 797
Target Start/End: Complemental strand, 19061194 - 19061061
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcat--tcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagc 763  Q
    ||||| ||||||| ||||||||| | ||| |||   |||| |||||||||||| || | ||| | | ||| || ||||| |||||||  |||||||||||    
T  19061194 atattcattcattcaaattgatataatacatcagaatcaagatcgctaaaaacataaaagatgaatgtgcgaacaaactcacaacatccaagttaatagc 19061095  T
Q  764 gtacaacgacaaaatgtctataaataatatgata 797  Q
     ||||||| ||||||| ||| |||||||||||||    
T  19061094 atacaacggcaaaatgcctacaaataatatgata 19061061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 666 - 807
Target Start/End: Complemental strand, 19723605 - 19723463
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgt 765  Q
    ||||| ||||||| |||| || ||||||| |||||||||| | ||||||||||| | ||| | | ||| |||||||| ||| |||  ||||||||| | |    
T  19723605 atattcattcattcaaatcgagagattacatcattcaacaccactaaaaacgtaaaggatgaatctgcgaataaactcacagcatccaagttaataacat 19723506  T
Q  766 acaacgacaaaatgtctataaata-atatgatacaattaaagt 807  Q
    | ||||||| |||| ||| ||| | |||||||| |||||||||    
T  19723505 ataacgacataatgcctacaaaaatatatgataaaattaaagt 19723463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 666 - 815
Target Start/End: Complemental strand, 20266594 - 20266444
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgt 765  Q
    ||||| ||||||| |||| || ||||||| | |||||||| | ||||||||||| | ||| | | ||| |||||||| |||||||  |||||||| || |    
T  20266594 atattcattcattcaaatcgagagattacattattcaacaccactaaaaacgtaaaggatgaatctgcgaataaactcacaacatccaagttaattgcat 20266495  T
Q  766 acaacgacaaaatgtcta-taaataatatgatacaattaaagtgactggaa 815  Q
    | |||| || ||||||||  |||  |||||||  |||||||||||||||||    
T  20266494 ataacggcataatgtctacaaaagtatatgatgaaattaaagtgactggaa 20266444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 666 - 823
Target Start/End: Original strand, 25406073 - 25406231
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgt 765  Q
    ||||| ||||||| |||| || | ||||| |||||||||| ||||||||||||| | ||| | | ||| || ||||| ||| |||  ||||||||||| |    
T  25406073 atattcattcattcaaatcgagatattacatcattcaacaccgctaaaaacgtaaaagatgaatctgcgaacaaactcacagcatccaagttaatagcat 25406172  T
Q  766 acaacgacaaaatgtctataaata-atatgatacaattaaagtgactggaatattcatg 823  Q
    | |||| || |||| ||| ||| | |||||||| ||||||||| || ||||||| ||||    
T  25406173 ataacggcataatgcctacaaaaatatatgataaaattaaagtcaccggaatatccatg 25406231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 735 - 797
Target Start/End: Complemental strand, 39888396 - 39888334
Alignment:
Q  735 aataaacttacaacatttaagttaatagcgtacaacgacaaaatgtctataaataatatgata 797  Q
    |||||||| ||||||| |||||||||||| |||||||| ||||||  |||||| |||||||||    
T  39888396 aataaactcacaacatctaagttaatagcatacaacgataaaatgcatataaagaatatgata 39888334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 766 - 824
Target Start/End: Original strand, 48809127 - 48809185
Alignment:
Q  766 acaacgacaaaatgtctataaataatatgatacaattaaagtgactggaatattcatgc 824  Q
    |||| ||||||||  ||||||||||||||||| |||||||||||||| |||| ||||||    
T  48809127 acaatgacaaaatacctataaataatatgataaaattaaagtgactgaaatactcatgc 48809185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 702 - 783
Target Start/End: Complemental strand, 27456731 - 27456650
Alignment:
Q  702 aacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgtacaacgacaaaatgtcta 783  Q
    ||||||| |||||||||| | ||| | ||||| || ||||| ||||||   ||||||||||| |||||||||||||||||||    
T  27456731 aacatcgttaaaaacgtaaaagatgaatttgcgaacaaactcacaacacccaagttaatagcatacaacgacaaaatgtcta 27456650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 666 - 719
Target Start/End: Complemental strand, 39987710 - 39987657
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgta 719  Q
    ||||| ||||||| ||||||||| ||||| |||||||||| |||||||||||||    
T  39987710 atattcattcattcaaattgataaattacatcattcaacaccgctaaaaacgta 39987657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 753 - 797
Target Start/End: Complemental strand, 5984032 - 5983988
Alignment:
Q  753 aagttaatagcgtacaacgacaaaatgtctataaataatatgata 797  Q
    ||||||||||| ||||||||||||||| ||| |||||||||||||    
T  5984032 aagttaatagcatacaacgacaaaatgcctacaaataatatgata 5983988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 700 - 796
Target Start/End: Original strand, 36775553 - 36775649
Alignment:
Q  700 tcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgtacaacgacaaaatgtctataaataatatgat 796  Q
    |||| ||||||||||||||| | | | | | ||| || ||||| |||||||  ||||||||||| ||||||| ||||||| ||| ||||||||||||    
T  36775553 tcaatatcgctaaaaacgtatagggtgaatctgcgaacaaactcacaacatccaagttaatagcatacaacggcaaaatgcctacaaataatatgat 36775649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 702 - 797
Target Start/End: Complemental strand, 16989618 - 16989523
Alignment:
Q  702 aacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgtacaacgacaaaatgtctataaataatatgata 797  Q
    |||||| ||||||||||| ||| ||| | |||||| ||||| ||| ||   ||||||||||| || |||| ||||||| ||| |||||||||||||    
T  16989618 aacatcactaaaaacgtaaatggtaaatctgcaaacaaactcacagcacccaagttaatagcataaaacggcaaaatgcctacaaataatatgata 16989523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 698 - 807
Target Start/End: Original strand, 19052155 - 19052264
Alignment:
Q  698 attcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgtacaacgac-aaaatgtctataaataatatgat 796  Q
    ||||||||||||||||||  || ||||||| ||| | |||||||| ||||| || || |||||||  ||||||| | ||||||  || ||||||||||||    
T  19052155 attcaacatcgctaaaaatataaatgataaatttacgaataaactcacaaccttcaaattaatag-atacaacggcaaaaatgcatacaaataatatgat 19052253  T
Q  797 acaattaaagt 807  Q
    | |||||||||    
T  19052254 aaaattaaagt 19052264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 765 - 819
Target Start/End: Complemental strand, 45393321 - 45393267
Alignment:
Q  765 tacaacgacaaaatgtctataaataatatgatacaattaaagtgactggaatatt 819  Q
    ||||| || |||||| ||||||||||||||||| ||||||| ||||| |||||||    
T  45393321 tacaatgataaaatgactataaataatatgataaaattaaaatgactagaatatt 45393267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 698 - 822
Target Start/End: Complemental strand, 7998049 - 7997924
Alignment:
Q  698 attcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgtacaacgacaaaatgtctataaata-atatgat 796  Q
    |||||||| ||||||||||||| | ||| | | |||||| ||||| ||| |||  ||||||||| | || |||| || |||| ||| ||| | |||||||    
T  7998049 attcaacaccgctaaaaacgtaaaggatgaatctgcaaacaaactcacatcatccaagttaataacatataacggcataatgcctacaaaaatatatgat 7997950  T
Q  797 acaattaaagtgactggaatattcat 822  Q
      |||||||||||| |||||||||||    
T  7997949 gaaattaaagtgaccggaatattcat 7997924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 729 - 810
Target Start/End: Original strand, 19885150 - 19885231
Alignment:
Q  729 tttgcaaataaacttacaacatttaagttaatagcgtacaacgacaaaatgtctataaataatatgatacaattaaagtgac 810  Q
    |||||||| ||||||||||||   |||||| |||  || || || ||||||||| |||||||||||||| ||| ||||||||    
T  19885150 tttgcaaacaaacttacaacacccaagttagtagtatataatgataaaatgtctctaaataatatgataaaatcaaagtgac 19885231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 765 - 850
Target Start/End: Original strand, 21947526 - 21947611
Alignment:
Q  765 tacaacgacaaaatgtctataaataatatgatacaattaaagtgactggaatattcatgcatccgtatctataacgttgatgtcca 850  Q
    ||||||| ||||||| ||| ||||||||||||| || | |||| || | ||||||||||| |||| ||||  |||||||| |||||    
T  21947526 tacaacggcaaaatgcctacaaataatatgataaaacttaagtcaccgaaatattcatgcttccggatctgcaacgttgacgtcca 21947611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 666 - 719
Target Start/End: Complemental strand, 30879367 - 30879314
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgta 719  Q
    ||||| ||||||| |||| || ||||||| |||||||||| |||||||||||||    
T  30879367 atattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgta 30879314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 756 - 809
Target Start/End: Original strand, 32873763 - 32873816
Alignment:
Q  756 ttaatagcgtacaacgacaaaatgtctataaataatatgatacaattaaagtga 809  Q
    |||||||| ||||| ||||| ||||||| ||||||||||||| ||| |||||||    
T  32873763 ttaatagcatacaatgacaatatgtctacaaataatatgataaaatcaaagtga 32873816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 700 - 797
Target Start/End: Complemental strand, 49627162 - 49627065
Alignment:
Q  700 tcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgtacaacgacaaaatgtctataaataatatgata 797  Q
    |||| ||||||||||||||| | ||| | | ||| || ||||| ||||||   || |||||||| ||||||| ||||||||||| |||||| ||||||    
T  49627162 tcaagatcgctaaaaacgtaaaggatgaatctgcgaacaaactcacaacacccaaattaatagcatacaacggcaaaatgtctacaaataagatgata 49627065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 47; Significance: 2e-17; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 666 - 823
Target Start/End: Complemental strand, 781678 - 781520
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgt 765  Q
    ||||| ||||||| |||| || ||||||| |||||||||| ||||||||||||  | ||| | | ||| |||| ||| |||||||  ||||||||||| |    
T  781678 atattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtgaaggatgaatctgcgaatatactcacaacatccaagttaatagcat 781579  T
Q  766 acaacgacaaaatgtctataaata-atatgatacaattaaagtgactggaatattcatg 823  Q
    | |||| || |||||||| ||| | |||||||| |||||||||||| ||||||| ||||    
T  781578 ataacggcataatgtctacaaaaatatatgataaaattaaagtgaccggaatatccatg 781520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 665 - 844
Target Start/End: Complemental strand, 11192659 - 11192480
Alignment:
Q  665 aatatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcg 764  Q
    |||||| ||||||| |||||||||||  |  ||||| || |||| |||||||||| |||||||   ||| || ||| |||||||||  ||||||||| |     
T  11192659 aatattcattcattcaaattgatagaaaatatcatttaatatcgttaaaaacgtaaatgataaacctgccaacaaatttacaacatcaaagttaataaca 11192560  T
Q  765 tacaacgacaaaatgtctataaataatatgatacaattaaagtgactggaatattcatgcatccgtatctataacgttga 844  Q
    |||||||||||||||  || |||||||| |||| | |||||||||  | |||| |||||  |||| ||||| ||||||||    
T  11192559 tacaacgacaaaatgcttacaaataatacgataaatttaaagtgatcgaaatactcatgtttccggatctacaacgttga 11192480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 673 - 823
Target Start/End: Original strand, 27266655 - 27266806
Alignment:
Q  673 ttcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgtacaacga 772  Q
    |||||| |||| || ||||||| |||||||||| ||||||||||||| ||||| | | ||| || ||||| ||| |||  ||||||||||| || ||| |    
T  27266655 ttcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaatgatgaatctgcgaacaaactcacagcatccaagttaatagcatataacaa 27266754  T
Q  773 caaaatgtctataaata-atatgatacaattaaagtgactggaatattcatg 823  Q
    || |||| ||| ||| | |||||||| |||||||||||| ||||||| ||||    
T  27266755 cataatgcctacaaaaatatatgataaaattaaagtgaccggaatatccatg 27266806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 765 - 823
Target Start/End: Original strand, 19100527 - 19100585
Alignment:
Q  765 tacaacgacaaaatgtctataaataatatgatacaattaaagtgactggaatattcatg 823  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||||||| |||||    
T  19100527 tacaatgacaaaatgtctacaaataatatgataaaattaaagtgactggaatactcatg 19100585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 666 - 823
Target Start/End: Original strand, 19259601 - 19259759
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgt 765  Q
    |||||||| |||| |||| || ||||||| || ||||||||||||||||||||| |  |||| | ||| || ||||| ||| |||  ||||||||||| |    
T  19259601 atatttatccattcaaatcgagagattacatcgttcaacatcgctaaaaacgtaaagaataaatctgcgaacaaactcacagcatccaagttaatagcat 19259700  T
Q  766 acaacgacaaaatgtctataaata-atatgatacaattaaagtgactggaatattcatg 823  Q
    | |||| || |||| ||| ||| | |||||||| |||||||||||| ||||||| ||||    
T  19259701 ataacggcataatgcctacaaaaatatatgataaaattaaagtgaccggaatatccatg 19259759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 666 - 823
Target Start/End: Complemental strand, 34882007 - 34881850
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgt 765  Q
    ||||| ||||||| |||| || ||||||| |||||||||| |||||||||| || | ||| | | |||||| ||||| |||||||  ||||||||||| |    
T  34882007 atattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacataaaggatgaatctgcaaacaaactcacaacatccaagttaatagcat 34881908  T
Q  766 acaacgacaaaatgtctataaata-atatgatacaattaaagtgactggaatattcatg 823  Q
    | |||| || |||| ||| ||| | |||||||| |||||||||||| ||||||| ||||    
T  34881907 ataacggcataatgcctacaaaaatatatgatataattaaagtgac-ggaatatccatg 34881850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 666 - 823
Target Start/End: Original strand, 35475127 - 35475285
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgt 765  Q
    ||||| ||||||| ||||||| ||||||| |||||||||| ||||||||||||| | ||| | | | | || | ||| |||||||  ||||||||||| |    
T  35475127 atattcattcattcaaattgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatatacgaacatactcacaacatccaagttaatagcat 35475226  T
Q  766 acaacgacaaaatgtctataaata-atatgatacaattaaagtgactggaatattcatg 823  Q
    | ||||||   ||| ||| ||| | |||||||| |||||||||||||||||||| ||||    
T  35475227 ataacgacgttatgcctacaaaaatatatgataaaattaaagtgactggaatatccatg 35475285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 666 - 823
Target Start/End: Complemental strand, 42580178 - 42580020
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgt 765  Q
    ||||| ||||||| |||| || ||||||| |||||||||| ||||||||||||| | ||| | | |  ||| ||||| ||| |||| ||||||||||| |    
T  42580178 atattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctataaacaaactcacagcattcaagttaatagcat 42580079  T
Q  766 acaacgacaaaatgtctataaata-atatgatacaattaaagtgactggaatattcatg 823  Q
    | |||| || ||| |||  ||| | |||||||| |||||||||||| ||||||||||||    
T  42580078 ataacggcataatatctgcaaaaatatatgataaaattaaagtgaccggaatattcatg 42580020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 666 - 817
Target Start/End: Complemental strand, 15571197 - 15571045
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgt 765  Q
    ||||| ||||||| ||||  ||||||||| |||||||||| | |||||||| ||   ||| | | ||| || ||||| |||||||  ||||||||||| |    
T  15571197 atattcattcattcaaatccatagattacatcattcaacaccactaaaaacataatggatgaatctgcgaacaaactcacaacatccaagttaatagcat 15571098  T
Q  766 acaacgacaaaatgtctataaata-atatgatacaattaaagtgactggaata 817  Q
    | ||||||| |||| ||| ||| | |||||||| |||||||||||||||||||    
T  15571097 ataacgacataatgcctacaaaaatatatgataaaattaaagtgactggaata 15571045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 666 - 817
Target Start/End: Original strand, 20257485 - 20257637
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgt 765  Q
    ||||| ||| ||| |||| |||||||||  |||||||||||||||||||||||| ||||| | | ||  || ||||| ||| |||  ||||||||| | |    
T  20257485 atattcattaattcaaatcgatagattatatcattcaacatcgctaaaaacgtaaatgatgaatctgtgaacaaactcacatcatccaagttaataacat 20257584  T
Q  766 acaacgacaaaatgtctataaata-atatgatacaattaaagtgactggaata 817  Q
    | ||||||| |||| ||| ||| | |||||||| |||||||||||| ||||||    
T  20257585 ataacgacataatgcctacaaaaatatatgataaaattaaagtgaccggaata 20257637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 667 - 815
Target Start/End: Complemental strand, 24549654 - 24549506
Alignment:
Q  667 tatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgta 766  Q
    |||| ||| ||||||||| ||||| ||  |||||||||||  ||||||||||| ||||| | ||| |||| ||| ||||| ||| |||||||| ||  ||    
T  24549654 tattcatttatttaaattaatagaatatttcattcaacataactaaaaacgtaaatgatgaatttacaaacaaatttacagcatctaagttaacagtata 24549555  T
Q  767 caacgacaaaatgtctataaataatatgatacaattaaagtgactggaa 815  Q
    ||| || |||||| ||| | ||||||||||| |||||| ||| ||||||    
T  24549554 caaagataaaatgcctacatataatatgataaaattaacgtggctggaa 24549506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 702 - 850
Target Start/End: Complemental strand, 34945636 - 34945488
Alignment:
Q  702 aacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgtacaacgacaaaatgtctataaataatatgatacaat 801  Q
    |||||||||||||||||| | | | | | ||| || ||||| ||||||   ||||||||||| ||||||||||||||| ||||||||||||||||| ||     
T  34945636 aacatcgctaaaaacgtaaagggtgaatctgcgaacaaactcacaacacccaagttaatagcatacaacgacaaaatgcctataaataatatgataaaac 34945537  T
Q  802 taaagtgactggaatattcatgcatccgtatctataacgttgatgtcca 850  Q
    | |||| || | ||||  ||||| |||| ||||  |||||||| |||||    
T  34945536 ttaagtcaccgaaatacccatgcttccggatctgcaacgttgacgtcca 34945488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 709 - 797
Target Start/End: Original strand, 37985965 - 37986053
Alignment:
Q  709 ctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgtacaacgacaaaatgtctataaataatatgata 797  Q
    ||||||||||| | ||| | | |||||| ||||| ||| |||| ||||||||||| ||||||||||||||||||| ||||||| |||||    
T  37985965 ctaaaaacgtaaaagatgaatctgcaaacaaactcacatcattcaagttaatagcatacaacgacaaaatgtctacaaataatgtgata 37986053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 738 - 797
Target Start/End: Complemental strand, 41630709 - 41630650
Alignment:
Q  738 aaacttacaacatttaagttaatagcgtacaacgacaaaatgtctataaataatatgata 797  Q
    ||||| ||||||  |||||||||||| ||||||||||||||||||| |||||||||||||    
T  41630709 aaactcacaacacctaagttaatagcatacaacgacaaaatgtctacaaataatatgata 41630650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 666 - 823
Target Start/End: Complemental strand, 4954282 - 4954124
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgt 765  Q
    ||||||||||||| |||| || ||||||| || ||||||| ||||||||| ||| | ||| | | ||  || ||||| |||||||  ||||||||||| |    
T  4954282 atatttattcattcaaatcgagagattacatcgttcaacaccgctaaaaatgtaaaggatgaatatgtgaacaaactcacaacatcaaagttaatagcat 4954183  T
Q  766 acaacgacaaaatgtctataaata-atatgatacaattaaagtgactggaatattcatg 823  Q
    | |||| || |||| ||| ||| | |||||||| ||||||||| || ||||||||||||    
T  4954182 ataacggcataatgcctacaaaaatatatgataaaattaaagtcaccggaatattcatg 4954124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 666 - 823
Target Start/End: Complemental strand, 7247249 - 7247091
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgt 765  Q
    ||||| ||||||| |||| || ||||||| |||||||||| ||||||||||||| | ||| | | ||| || ||||| ||| |||  ||||||||||| |    
T  7247249 atattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaactcacagcatccaagttaatagcat 7247150  T
Q  766 acaacgacaaaatgtctataaata-atatgatacaattaaagtgactggaatattcatg 823  Q
    | |||| || |||| ||| ||| | |||||||| ||||||||| || ||||||| ||||    
T  7247149 ataacggcataatgcctacaaaaatatatgataaaattaaagtcaccggaatatccatg 7247091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 696 - 797
Target Start/End: Complemental strand, 28097408 - 28097307
Alignment:
Q  696 tcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgtacaacgacaaaatgtctataaataatatga 795  Q
    ||||||||||||| |||||||||| |  |||| |||| ||| || ||||||||||| ||||||||||| ||||||   |||||  ||| |||||||||||    
T  28097408 tcattcaacatcgttaaaaacgtaaaatataaatttgtaaacaagcttacaacattaaagttaatagcatacaacagtaaaataactacaaataatatga 28097309  T
Q  796 ta 797  Q
    ||    
T  28097308 ta 28097307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 672 - 823
Target Start/End: Original strand, 3271197 - 3271349
Alignment:
Q  672 attcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgtacaacg 771  Q
    ||||||| |||| || ||||||| |||||||||| ||||||||||||| | ||| | | ||| || ||||| | |||||  ||||||||||| || ||||    
T  3271197 attcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaactcataacatccaagttaatagcatataacg 3271296  T
Q  772 acaaaatgtctataaata-atatgatacaattaaagtgactggaatattcatg 823  Q
    ||| ||||  || ||| | |||||||| |||||||||||  ||||||| ||||    
T  3271297 acataatgcttacaaaaatatatgataaaattaaagtgatcggaatatccatg 3271349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 702 - 850
Target Start/End: Complemental strand, 38598040 - 38597892
Alignment:
Q  702 aacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgtacaacgacaaaatgtctataaataatatgatacaat 801  Q
    |||||||||||||||||| | | | | ||||| || ||||| ||||||   ||||||||||| ||||||| ||||||| ||| ||||||||||||| ||     
T  38598040 aacatcgctaaaaacgtaaagggtgaatttgcgaacaaactcacaacacccaagttaatagcatacaacggcaaaatgcctacaaataatatgataaaac 38597941  T
Q  802 taaagtgactggaatattcatgcatccgtatctataacgttgatgtcca 850  Q
      |||| |||| ||||  ||||| |||| ||||  |||||||| |||||    
T  38597940 ctaagtcactgaaatacccatgcttccggatctgcaacgttgacgtcca 38597892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 666 - 807
Target Start/End: Complemental strand, 7242074 - 7241932
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgt 765  Q
    ||||| ||||||| |||| || ||||||| |||||||||| ||||||||||||| | ||| | | ||| || ||||| ||| |||  ||||||||||| |    
T  7242074 atattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaactcacagcatccaagttaatagcat 7241975  T
Q  766 acaacgacaaaatgtctataaata-atatgatacaattaaagt 807  Q
    | |||| || |||| ||| ||| | |||||||| |||||||||    
T  7241974 ataacggcataatgcctacaaaaatatatgataaaattaaagt 7241932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 666 - 823
Target Start/End: Original strand, 18677255 - 18677412
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgt 765  Q
    ||||| ||||||| |||| || ||||||| |||||||||| ||||||||||||| | ||| | | ||| || ||||  |||||||  ||||||||||| |    
T  18677255 atattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgta-aggatgaatctgcgaacaaacacacaacatccaagttaatagcat 18677353  T
Q  766 acaacgacaaaatgtctataaata-atatgatacaattaaagtgactggaatattcatg 823  Q
    | |||| || ||||  || ||| | |||||||| |||||||||||| ||||||| ||||    
T  18677354 ataacggcataatgcttacaaaaatatatgataaaattaaagtgaccggaatatccatg 18677412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 666 - 823
Target Start/End: Original strand, 21060072 - 21060230
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgt 765  Q
    ||||| ||||||| |||| || ||||||| |||||||||| ||||||||||||| | ||| | | | | || | ||| |||||||  ||||| ||||  |    
T  21060072 atattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctacgaacatactcacaacatccaagttgatagaat 21060171  T
Q  766 acaacgacaaaatgtctataaata-atatgatacaattaaagtgactggaatattcatg 823  Q
    | ||||||| |||| ||| ||| | |||||||| |||||||||||| ||||||| ||||    
T  21060172 ataacgacataatgcctacaaaaatatatgataaaattaaagtgaccggaatatccatg 21060230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 731 - 793
Target Start/End: Complemental strand, 32691171 - 32691109
Alignment:
Q  731 tgcaaataaacttacaacatttaagttaatagcgtacaacgacaaaatgtctataaataatat 793  Q
    |||||| ||||| |||||| |||| |||||||  ||||||| |||||||||||||||||||||    
T  32691171 tgcaaacaaactcacaacacttaacttaatagtatacaacggcaaaatgtctataaataatat 32691109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 666 - 823
Target Start/End: Complemental strand, 43149017 - 43148859
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgt 765  Q
    ||||| ||||||| |||| || ||||||  |||||||||| ||||||||| ||| | ||| | | ||| || ||||| |||||||  ||||||||||| |    
T  43149017 atattcattcattcaaatcgagagattatatcattcaacaccgctaaaaatgtaaaggatgaatctgcgaacaaactcacaacatccaagttaatagcat 43148918  T
Q  766 acaacgacaaaatgtctataaata-atatgatacaattaaagtgactggaatattcatg 823  Q
    | |||| || |||| ||| ||| | |||||||| ||||||||| || ||||||| ||||    
T  43148917 ataacggcataatgcctacaaaaatatatgataaaattaaagtcaccggaatatccatg 43148859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 696 - 804
Target Start/End: Original strand, 7612877 - 7612986
Alignment:
Q  696 tcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgtacaacgacaaaatgtctataaata-atatg 794  Q
    |||||||||| ||||||||||||| | ||| | ||||| || ||||| |||||||| || |||||||| || ||||||| |||| ||| ||| | |||||    
T  7612877 tcattcaacaccgctaaaaacgtaaaagatgaatttgcgaacaaactcacaacattcaatttaatagcatagaacgacataatgcctacaaaaatatatg 7612976  T
Q  795 atacaattaa 804  Q
    ||| ||||||    
T  7612977 ataaaattaa 7612986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 753 - 802
Target Start/End: Original strand, 31078315 - 31078364
Alignment:
Q  753 aagttaatagcgtacaacgacaaaatgtctataaataatatgatacaatt 802  Q
    ||||||||||| ||||| ||||||||||||||||||||||| ||| ||||    
T  31078315 aagttaatagcatacaatgacaaaatgtctataaataatattataaaatt 31078364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 771 - 816
Target Start/End: Original strand, 31802367 - 31802412
Alignment:
Q  771 gacaaaatgtctataaataatatgatacaattaaagtgactggaat 816  Q
    |||||||| |||||||||||||||||| ||||||||||| ||||||    
T  31802367 gacaaaatatctataaataatatgataaaattaaagtgattggaat 31802412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 671 - 716
Target Start/End: Complemental strand, 37483332 - 37483287
Alignment:
Q  671 tattcatttaaattgatagattacgtcattcaacatcgctaaaaac 716  Q
    |||||||| |||| |||||||||| |||||||||||||||||||||    
T  37483332 tattcattcaaatcgatagattacatcattcaacatcgctaaaaac 37483287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 666 - 850
Target Start/End: Complemental strand, 13007511 - 13007324
Alignment:
Q  666 atatttattcatttaaattgatagattacgtc--attc-aacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatag 762  Q
    ||||| ||||||| ||||||||||| ||| ||  || | |||||||||||||||||| | | | | | |||||| ||||| ||| ||   ||||||||||    
T  13007511 atattcattcattcaaattgatagagtacatcaaatacaaacatcgctaaaaacgtaaagggtgaatctgcaaacaaactcacagcacccaagttaatag 13007412  T
Q  763 cgtacaacgacaaaatgtctataaataatatgatacaattaaagtgactggaatattcatgcatccgtatctataacgttgatgtcca 850  Q
    | ||||||| ||||||| ||| ||||||||||||| || | |||| || | ||||  ||||| |||| ||||  |||||||| |||||    
T  13007411 catacaacggcaaaatgcctacaaataatatgataaaacttaagtcaccgaaatacccatgcttccggatctgcaacgttgacgtcca 13007324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 753 - 797
Target Start/End: Original strand, 14082292 - 14082336
Alignment:
Q  753 aagttaatagcgtacaacgacaaaatgtctataaataatatgata 797  Q
    ||||||||||| ||||||||||||||| ||| |||||||||||||    
T  14082292 aagttaatagcatacaacgacaaaatgcctacaaataatatgata 14082336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 753 - 844
Target Start/End: Complemental strand, 15571679 - 15571587
Alignment:
Q  753 aagttaatagcgtacaac-gacaaaatgtctataaataatatgatacaattaaagtgactggaatattcatgcatccgtatctataacgttga 844  Q
    ||||||||||| |||||| |  |||||||||||||||||||||||| |||| |||| |||| | || |||||| |||| ||||  ||||||||    
T  15571679 aagttaatagcatacaactggaaaaatgtctataaataatatgataaaatttaagtcactgaactactcatgcttccggatctgcaacgttga 15571587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 753 - 816
Target Start/End: Original strand, 9762349 - 9762412
Alignment:
Q  753 aagttaatagcgtacaacgacaaaatgtctataaataatatgatacaattaaagtgactggaat 816  Q
    |||||||||||  ||||||||||| |||||| ||||||||| ||| ||| |||||||| |||||    
T  9762349 aagttaatagctaacaacgacaaagtgtctacaaataatataataaaatcaaagtgacaggaat 9762412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 660 - 810
Target Start/End: Complemental strand, 11768295 - 11768144
Alignment:
Q  660 aaatcaatatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaa 759  Q
    ||||| ||||| ||||||| |||| ||||  |||| | |||||||||||||||||||||| | ||| | | ||| || ||||| ||| |||  ||| |||    
T  11768295 aaatcgatattcattcattaaaatcgatatgttacattattcaacatcgctaaaaacgtataggatgaatctgcgaacaaactcacatcatccaagataa 11768196  T
Q  760 tagcgtacaacgacaaaatgtctataaata-atatgatacaattaaagtgac 810  Q
    |||| || |||| || |||| ||| ||| | |||||||| ||||||||||||    
T  11768195 tagcatataacggcataatggctacaaaaatatatgataaaattaaagtgac 11768144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 666 - 823
Target Start/End: Complemental strand, 30299134 - 30298976
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgt 765  Q
    ||||| |||||||||||| || | ||||  |||||||||| ||||||||||||| | ||| | | ||| || | ||| | |||||  ||||||||||| |    
T  30299134 atattcattcatttaaatcgagatattaaatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacatactcagaacatccaagttaatagcat 30299035  T
Q  766 acaacgacaaaatgtctataaata-atatgatacaattaaagtgactggaatattcatg 823  Q
    | |||| || |||| ||| ||| | |||||||| ||||||||||||  |||||| ||||    
T  30299034 ataacggcataatgcctacaaaaatatatgataaaattaaagtgaccagaatatccatg 30298976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 665 - 763
Target Start/End: Original strand, 43008103 - 43008201
Alignment:
Q  665 aatatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagc 763  Q
    |||||| ||||||| |||| || ||||||| |||||||||| | ||||||||||| | ||||| ||||  || ||||| | |||||  |||||||||||    
T  43008103 aatattcattcattcaaatcgagagattacatcattcaacaccactaaaaacgtaaaggataaatttgagaacaaactcataacatccaagttaatagc 43008201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 753 - 810
Target Start/End: Original strand, 8514548 - 8514605
Alignment:
Q  753 aagttaatagcgtacaacgacaaaatgtctataaataatatgatacaattaaagtgac 810  Q
    ||||||||| | |||||||||||||| | || ||||||||||||| ||| ||||||||    
T  8514548 aagttaataacatacaacgacaaaatatttacaaataatatgataaaataaaagtgac 8514605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 666 - 763
Target Start/End: Original strand, 8771970 - 8772067
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagc 763  Q
    ||||| ||||||| |||| || ||||||| |||||||||| | ||||||||||| | ||| | |||||||| ||||| | | |||  |||||||||||    
T  8771970 atattcattcattcaaatcgagagattacatcattcaacaccactaaaaacgtaaaggatgaatttgcaaacaaactcatagcatccaagttaatagc 8772067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 666 - 719
Target Start/End: Complemental strand, 27752215 - 27752162
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgta 719  Q
    ||||| ||||||| |||| || ||||||| |||||||||| |||||||||||||    
T  27752215 atattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgta 27752162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 731 - 844
Target Start/End: Original strand, 35920870 - 35920983
Alignment:
Q  731 tgcaaataaacttacaacatttaagttaatagcgtacaacgacaaaatgtctataaataatatgatacaattaaagtgactggaatattcatgcatccgt 830  Q
    |||||| ||| ||||||||   || |||||||| ||||| ||||||||| ||| ||||||||||||| ||| ||| | ||| ||||||  |||| ||||     
T  35920870 tgcaaacaaatttacaacaccaaatttaatagcatacaatgacaaaatgcctacaaataatatgataaaatcaaaatcactagaatatcgatgcttccgg 35920969  T
Q  831 atctataacgttga 844  Q
    ||||  ||||||||    
T  35920970 atctgcaacgttga 35920983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 47; Significance: 2e-17; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 653 - 796
Target Start/End: Complemental strand, 35175698 - 35175553
Alignment:
Q  653 caaaattaaatcaatatttattcatttaaattgatagattacgtcat--tcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacat 750  Q
    ||||| |||| | ||||| ||||||| ||||||||||| ||| ||||  |||||||||||||||||||| | ||| | | ||| || ||||| ||||||     
T  35175698 caaaaataaaacgatattcattcattcaaattgatagaatacatcataatcaacatcgctaaaaacgtaaaagatgaatctgcgaacaaactcacaacac 35175599  T
Q  751 ttaagttaatagcgtacaacgacaaaatgtctataaataatatgat 796  Q
    | ||||||||||| ||||| ||||||||| ||| ||| ||||||||    
T  35175598 tcaagttaatagcatacaatgacaaaatgcctacaaacaatatgat 35175553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 653 - 809
Target Start/End: Complemental strand, 22803328 - 22803171
Alignment:
Q  653 caaaattaaatcaatatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacattt 752  Q
    ||||| |||||  ||||| |||||||||||| ||||| |||| |||||||||||||||||||||||| | ||||| ||||  || ||||| ||| |||      
T  22803328 caaaaataaattgatattcattcatttaaatcgataggttacatcattcaacatcgctaaaaacgtaaaggataaatttgtgaacaaactcacagcatcc 22803229  T
Q  753 aagttaatagcgtacaacgacaaaatgtctataaata-atatgatacaattaaagtga 809  Q
    ||||||||||| || |||| || |||| ||| ||| | | |||||| |||||||||||    
T  22803228 aagttaatagcatataacggcataatgcctacaaaaatacatgataaaattaaagtga 22803171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 666 - 818
Target Start/End: Complemental strand, 25162721 - 25162568
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgt 765  Q
    ||||| ||||||| |||| || ||||||| |||||||||| ||||||||||||| | ||| | |  || || ||||| |||||||  ||||||||||| |    
T  25162721 atattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatccgcgaacaaactcacaacatccaagttaatagcat 25162622  T
Q  766 acaacgacaaaatgtctataaata-atatgatacaattaaagtgactggaatat 818  Q
    | ||||||| |||| ||| ||| | |||||||| |||||||||||| |||||||    
T  25162621 ataacgacataatgcctacaaaaatatatgataaaattaaagtgaccggaatat 25162568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 653 - 823
Target Start/End: Original strand, 30648495 - 30648666
Alignment:
Q  653 caaaattaaatcaatatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacattt 752  Q
    ||||||||||  |||||| ||||||| |||| || ||||||| | |||||||| |||||||||| || | ||| | | ||| || ||||| |||||||      
T  30648495 caaaattaaactaatattcattcattcaaatcgagagattacataattcaacaccgctaaaaacataaaggatgaatctgcgaacaaactcacaacatcc 30648594  T
Q  753 aagttaatagcgtacaacgacaaaatgtctataaata-atatgatacaattaaagtgactggaatattcatg 823  Q
    ||||||||||| || ||||||| | || ||||||| | |||||||| ||||||||| || | ||||||||||    
T  30648595 aagttaatagcatataacgacatattgcctataaaaatatatgataaaattaaagttaccgaaatattcatg 30648666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 666 - 818
Target Start/End: Complemental strand, 36906407 - 36906254
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgt 765  Q
    ||||| ||||||| |||| || ||||||| |||||||||| ||||||||||||| | ||| | | ||| || ||||| ||| |||  ||||||||||| |    
T  36906407 atattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaactcacatcatccaagttaatagcat 36906308  T
Q  766 acaacgacaaaatgtctataaata-atatgatacaattaaagtgactggaatat 818  Q
    | |||| || |||| ||| ||| | |||||||  ||||||||||||||||||||    
T  36906307 ataacggcataatgcctacaaaaatatatgatgaaattaaagtgactggaatat 36906254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 666 - 844
Target Start/End: Original strand, 25631315 - 25631495
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgt 765  Q
    ||||| ||||||| |||| || ||||||| |||||||||| ||||||||| ||| | ||| | | ||| || ||||| ||| |||  ||||||||| | |    
T  25631315 atattcattcattcaaatcgagagattacatcattcaacaccgctaaaaatgtaaaggatgaatctgcgaacaaactcacatcatccaagttaataacat 25631414  T
Q  766 acaacgacaaaatgtctataaata-atatgatacaattaaagtgactggaatattcat-gcatccgtatctataacgttga 844  Q
    | |||| || |||| ||| ||| | |||||||| |||||||||||| ||||||| ||| ||||||| ||||| ||||||||    
T  25631415 ataacggcataatgcctacaaaaatatatgataaaattaaagtgaccggaatatccatggcatccggatctacaacgttga 25631495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 702 - 797
Target Start/End: Complemental strand, 43017131 - 43017036
Alignment:
Q  702 aacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgtacaacgacaaaatgtctataaataatatgata 797  Q
    |||||||||||||||||| | ||| | | ||  |||||||| ||||||  |||||||||||| ||||||| ||||||| ||| |||||||||||||    
T  43017131 aacatcgctaaaaacgtaaaggatgaatatgtgaataaactcacaacacctaagttaatagcatacaacggcaaaatgcctacaaataatatgata 43017036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 666 - 820
Target Start/End: Original strand, 44907188 - 44907343
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgt 765  Q
    ||||| ||||||| |||| || | ||||| |||||||||| ||||||||||||| | ||| | | ||| || ||||| |||||||  || |||||||| |    
T  44907188 atattcattcattcaaatcgagatattacatcattcaacaacgctaaaaacgtaaaggatgaatctgcgaacaaactcacaacatccaaattaatagcat 44907287  T
Q  766 acaacgacaaaatgtctataaata-atatgatacaattaaagtgactggaatattc 820  Q
    | ||||||| |||| ||| ||| | |||||||  |||||||||||| |||||||||    
T  44907288 ataacgacataatgcctacaaaaatatatgatgaaattaaagtgaccggaatattc 44907343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 666 - 818
Target Start/End: Original strand, 3848708 - 3848861
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgt 765  Q
    ||||| ||||||| |||| || ||||||| |||||||||| ||||||||||||| | ||| | | ||| || ||||| ||| |||  ||||||||||| |    
T  3848708 atattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaactcacagcatccaagttaatagcat 3848807  T
Q  766 acaacgacaaaatgtctataaata-atatgatacaattaaagtgactggaatat 818  Q
    | | || || |||| ||| ||||| |||||||| ||||||||| || |||||||    
T  3848808 atagcggcataatgcctacaaatatatatgataaaattaaagtcaccggaatat 3848861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 666 - 818
Target Start/End: Complemental strand, 12116383 - 12116230
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgt 765  Q
    ||||| ||||||| |||| || ||||||| |||||||||||||||||||||||| | ||| | | |   || ||||| |||||||  ||||||||||| |    
T  12116383 atattcattcattcaaatcgagagattacatcattcaacatcgctaaaaacgtaaaggatgaatctaagaacaaactcacaacatccaagttaatagcat 12116284  T
Q  766 acaacgacaaaatgtctataaata-atatgatacaattaaagtgactggaatat 818  Q
    | |||| || |||| ||| ||| | |||||||  ||||||||||||| ||||||    
T  12116283 ataacggcataatgcctacaaaaatatatgatgaaattaaagtgactagaatat 12116230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 742 - 810
Target Start/End: Original strand, 19862213 - 19862281
Alignment:
Q  742 ttacaacatttaagttaatagcgtacaacgacaaaatgtctataaataatatgatacaattaaagtgac 810  Q
    |||||| ||| || |||||||| || ||||||||||||||| |||||||||||||| ||||| ||||||    
T  19862213 ttacaaaattcaaattaatagcatataacgacaaaatgtctctaaataatatgataaaattagagtgac 19862281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 666 - 823
Target Start/End: Complemental strand, 46934924 - 46934769
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgt 765  Q
    ||||| ||||||| |||| || ||||| | |||||||||||||||||||||||| | ||| | | | | || ||||| |||||||  ||||||||||| |    
T  46934924 atattcattcattcaaatcgagagattgcatcattcaacatcgctaaaaacgtaaaggatgaatctacgaacaaactcacaacatccaagttaatagcat 46934825  T
Q  766 acaacgacaaaatgtctataaata-atatgatacaattaaagtgactggaatattcatg 823  Q
    | ||||||   ||| ||| ||| | |||||||| |||||||||||| ||||||| ||||    
T  46934824 ataacgac---atgcctacaaaaatatatgataaaattaaagtgaccggaatatccatg 46934769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 666 - 850
Target Start/End: Original strand, 628730 - 628916
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcat--tcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagc 763  Q
    ||||| ||||||| ||||||||||| ||| |||   |||| ||||||||||||||| | ||| | | ||| || ||||| ||||||   ||||||||||     
T  628730 atattcattcattcaaattgatagaatacatcaaaatcaagatcgctaaaaacgtaaaggatgaatctgcgaacaaactcacaacacccaagttaataga 628829  T
Q  764 gtacaacgacaaaatgtctataaataatatgatacaattaaagtgactggaatattcatgcatccgtatctataacgttgatgtcca 850  Q
     ||||||| ||||||| ||| ||||||||||||| |||  || | ||  ||||| || ||| || | ||||| ||||||||||||||    
T  628830 atacaacggcaaaatgcctacaaataatatgatataatctaaatcaccagaatactcttgcttctggatctacaacgttgatgtcca 628916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 666 - 725
Target Start/End: Original strand, 6823413 - 6823472
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgat 725  Q
    ||||| ||||||||||||||||||||||| | ||| ||||||||||||||| || |||||    
T  6823413 atattcattcatttaaattgatagattacattattaaacatcgctaaaaacctaaatgat 6823472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 673 - 823
Target Start/End: Original strand, 39917195 - 39917345
Alignment:
Q  673 ttcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgtacaacga 772  Q
    |||||| ||||||| ||||||  |||||||||| | ||||||||||| | ||| | | ||  |||||||| |||||||  ||||||||||| || || |     
T  39917195 ttcattaaaattgagagattaa-tcattcaacacctctaaaaacgtaaaggatgaatctgtgaataaactcacaacatccaagttaatagcatataaagg 39917293  T
Q  773 caaaatgtctataaata-atatgatacaattaaagtgactggaatattcatg 823  Q
    || |||| ||| ||| | |||||||| |||||||||||||||||||| ||||    
T  39917294 cataatgcctacaaaaatatatgataaaattaaagtgactggaatatccatg 39917345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 702 - 797
Target Start/End: Original strand, 44959818 - 44959913
Alignment:
Q  702 aacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgtacaacgacaaaatgtctataaataatatgata 797  Q
    |||||||||||||||||| | | | | | |||||||||||| ||| |||  ||||||||||| ||||| | ||||||| ||| |||||||||||||    
T  44959818 aacatcgctaaaaacgtaaagggtgaatctgcaaataaactcacagcatccaagttaatagcatacaatggcaaaatgcctacaaataatatgata 44959913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 702 - 847
Target Start/End: Complemental strand, 4711725 - 4711580
Alignment:
Q  702 aacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgtacaacgacaaaatgtctataaataatatgatacaat 801  Q
    |||||| |||||||| || | ||| | | |||||| ||||| ||||||   ||||||||||| ||||||| ||||||| ||| ||||||||||||| ||     
T  4711725 aacatcactaaaaacataaaggatgaatctgcaaacaaactcacaacacccaagttaatagcatacaacggcaaaatgcctacaaataatatgataaaac 4711626  T
Q  802 taaagtgactggaatattcatgcatccgtatctataacgttgatgt 847  Q
    | |||| || | ||||  ||||| |||| ||||  |||||||||||    
T  4711625 ttaagtcaccgaaatacccatgcttccggatctgcaacgttgatgt 4711580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 666 - 818
Target Start/End: Complemental strand, 17238090 - 17237937
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgt 765  Q
    ||||| ||||||| ||||||| | ||||| |||||||||| ||||||||||||| | ||  | |  || || ||||| ||| |||  ||||||||||| |    
T  17238090 atattcattcattcaaattgagatattacatcattcaacaccgctaaaaacgtaaaggaagaatcagcgaacaaactcacatcatccaagttaatagcat 17237991  T
Q  766 acaacgacaaaatgtctataaata-atatgatacaattaaagtgactggaatat 818  Q
    | ||||||| |||| ||| ||| | |||| ||| |||||||||||| |||||||    
T  17237990 ataacgacataatgcctacaaaaatatataataaaattaaagtgaccggaatat 17237937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 666 - 822
Target Start/End: Complemental strand, 32607754 - 32607597
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgt 765  Q
    ||||| ||||||| |||| || ||||||| |||||||||| ||||||||||||| | ||| | | ||| || ||||| |||||||  | ||||||||| |    
T  32607754 atattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaactcacaacatccaggttaatagcat 32607655  T
Q  766 acaacgacaaaatgtctataaata-atatgatacaattaaagtgactggaatattcat 822  Q
    | || | || |||| ||| ||| | |||||||  |||||||||||  |||||||||||    
T  32607654 ataatggcataatgcctacaaaaatatatgatgaaattaaagtgatcggaatattcat 32607597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 666 - 779
Target Start/End: Original strand, 35498989 - 35499102
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgt 765  Q
    ||||| ||||||| |||| ||  |||||| |||||||||| ||||||||||||| | ||| | | ||| || |||||||||||||  || |||||||| |    
T  35498989 atattcattcattcaaatcgagggattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaaaaaacttacaacatccaaattaatagcat 35499088  T
Q  766 acaacgacaaaatg 779  Q
    | ||||||| ||||    
T  35499089 ataacgacataatg 35499102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 666 - 796
Target Start/End: Original strand, 50194142 - 50194274
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcat--tcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagc 763  Q
    ||||| ||||||| ||||||||| | ||| |||   |||||||||||||||||||| | ||| | | ||| || ||||| |||||||  |||||||||||    
T  50194142 atattcattcattcaaattgatataatacatcagaatcaacatcgctaaaaacgtaaaggatgaatctgcgaacaaactcacaacatccaagttaatagc 50194241  T
Q  764 gtacaacgacaaaatgtctataaataatatgat 796  Q
     || |||| ||||||| ||| ||| ||||||||    
T  50194242 atataacggcaaaatgcctacaaaaaatatgat 50194274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 753 - 797
Target Start/End: Original strand, 9797430 - 9797474
Alignment:
Q  753 aagttaatagcgtacaacgacaaaatgtctataaataatatgata 797  Q
    ||||||||||| ||||||||||||||| ||| |||||||||||||    
T  9797430 aagttaatagcatacaacgacaaaatgcctacaaataatatgata 9797474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 700 - 796
Target Start/End: Complemental strand, 16235671 - 16235575
Alignment:
Q  700 tcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgtacaacgacaaaatgtctataaataatatgat 796  Q
    |||| ||||||||||||||| | | ||| | ||| || ||||| ||| |||  ||||||||||| ||||||||||||||| ||| || |||||||||    
T  16235671 tcaatatcgctaaaaacgtatagggtaaatctgcgaacaaactcacaccatccaagttaatagcatacaacgacaaaatgcctacaagtaatatgat 16235575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 706 - 797
Target Start/End: Complemental strand, 19619952 - 19619861
Alignment:
Q  706 tcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgtacaacgacaaaatgtctataaataatatgata 797  Q
    |||||||||||||| ||||| | | ||| |  ||||| | ||||| | |||||||||| ||||||| ||||||| ||| |||||||||||||    
T  19619952 tcgctaaaaacgtaaatgatgaatctgcgatcaaactcaaaacatcttagttaatagcatacaacggcaaaatgcctacaaataatatgata 19619861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 702 - 797
Target Start/End: Original strand, 21533654 - 21533749
Alignment:
Q  702 aacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgtacaacgacaaaatgtctataaataatatgata 797  Q
    |||||||||||||||||| | | ||| | ||| || ||||| ||| ||   ||||||||||| ||||||| ||||||| ||| |||||||||||||    
T  21533654 aacatcgctaaaaacgtaaaaggtaaatctgcgaacaaactcacagcacccaagttaatagcatacaacggcaaaatgcctacaaataatatgata 21533749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 753 - 796
Target Start/End: Original strand, 27706122 - 27706165
Alignment:
Q  753 aagttaatagcgtacaacgacaaaatgtctataaataatatgat 796  Q
    ||||||||||| ||||||||||||||| ||| ||||||||||||    
T  27706122 aagttaatagcatacaacgacaaaatgcctacaaataatatgat 27706165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 713 - 796
Target Start/End: Original strand, 42455676 - 42455759
Alignment:
Q  713 aaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgtacaacgacaaaatgtctataaataatatgat 796  Q
    ||||||| ||| ||| | ||| || ||||| |||||||  ||||||||||| ||||||||||||||| ||| || |||||||||    
T  42455676 aaacgtaaatggtaaatctgcgaacaaactcacaacatcgaagttaatagcatacaacgacaaaatgactacaactaatatgat 42455759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 702 - 797
Target Start/End: Original strand, 45568290 - 45568385
Alignment:
Q  702 aacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgtacaacgacaaaatgtctataaataatatgata 797  Q
    |||||||||||||||||| | | | | | ||| |||||||| ||| ||   ||||||||||| ||||||| ||||||| ||| |||||||||||||    
T  45568290 aacatcgctaaaaacgtaaagggtgaatctgcgaataaactcacatcacccaagttaatagcatacaacggcaaaatgcctacaaataatatgata 45568385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 765 - 844
Target Start/End: Original strand, 46322223 - 46322302
Alignment:
Q  765 tacaacgacaaaatgtctataaataatatgatacaattaaagtgactggaatattcatgcatccgtatctataacgttga 844  Q
    ||||| |||||||||  | |||||||||||||| || |||||| ||  ||||||| |||| |||||||||| ||||||||    
T  46322223 tacaatgacaaaatgcttttaaataatatgataaaagtaaagtcacaagaatattgatgcctccgtatctacaacgttga 46322302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 680 - 763
Target Start/End: Original strand, 51628951 - 51629034
Alignment:
Q  680 aaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagc 763  Q
    ||||||||||| ||  | ||||||||||||| |||| ||| | ||| | |||||||||||| | ||| ||||||||||||||||    
T  51628951 aaattgatagagtaaataattcaacatcgctgaaaaagtaaaagatgaatttgcaaataaattcacatcatttaagttaatagc 51629034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 702 - 796
Target Start/End: Original strand, 7448759 - 7448853
Alignment:
Q  702 aacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgtacaacgacaaaatgtctataaataatatgat 796  Q
    ||||||| |||||||||| ||| | | | ||| || ||||| ||| ||  |||||||||||| |||| || ||||||||||| ||||||||||||    
T  7448759 aacatcgataaaaacgtaaatggtgaatctgcgaacaaactcacatcacctaagttaatagcatacagcggcaaaatgtctacaaataatatgat 7448853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 702 - 796
Target Start/End: Original strand, 7456901 - 7456995
Alignment:
Q  702 aacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgtacaacgacaaaatgtctataaataatatgat 796  Q
    ||||||| |||||||||| ||| | | | ||| || ||||| ||| ||  |||||||||||| |||| || ||||||||||| ||||||||||||    
T  7456901 aacatcgataaaaacgtaaatggtgaatctgcgaacaaactcacatcacctaagttaatagcatacagcggcaaaatgtctacaaataatatgat 7456995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 753 - 823
Target Start/End: Original strand, 26275715 - 26275785
Alignment:
Q  753 aagttaatagcgtacaacgacaaaatgtctataaataatatgatacaattaaagtgactggaatattcatg 823  Q
    ||||||||||| ||||| ||||||||| ||| ||||||||||||| |||  |||| |||| |||| |||||    
T  26275715 aagttaatagcatacaatgacaaaatgcctacaaataatatgataaaatataagtcactgaaatactcatg 26275785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 666 - 719
Target Start/End: Original strand, 38440380 - 38440433
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgta 719  Q
    ||||| ||||||| |||| || ||||||| |||||||||| |||||||||||||    
T  38440380 atattcattcattcaaatcgaaagattacatcattcaacaccgctaaaaacgta 38440433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 672 - 844
Target Start/End: Complemental strand, 46178847 - 46178674
Alignment:
Q  672 attcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgtacaacg 771  Q
    ||||||| |||| |||| ||||  |||||||||| || |||||||||| | |||||   ||| || ||||| ||| |||  ||||||||||| || ||||    
T  46178847 attcattcaaatcgatatattatatcattcaacaccgttaaaaacgtaaaagataaaactgcgaacaaactcacatcatccaagttaatagcatataacg 46178748  T
Q  772 acaaaatgtctataaata-atatgatacaattaaagtgactggaatattcatgcatccgtatctataacgttga 844  Q
    ||| ||||  || ||| | |||||||| ||| |||||||| ||||||  ||||| |||| ||||  ||||||||    
T  46178747 acataatgcttacaaaaatatatgataaaataaaagtgaccggaatacccatgcctccggatctgcaacgttga 46178674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 732 - 813
Target Start/End: Original strand, 47176038 - 47176119
Alignment:
Q  732 gcaaataaacttacaacatttaagttaatagcgtacaacgacaaaatgtctataaataatatgatacaattaaagtgactgg 813  Q
    ||||| ||||| |||||||| ||||||||||| | ||||||| || |  ||| ||||||||||||| ||| ||| |||||||    
T  47176038 gcaaacaaactcacaacattcaagttaatagcattcaacgactaattacctacaaataatatgataaaatcaaattgactgg 47176119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 700 - 797
Target Start/End: Original strand, 53807701 - 53807798
Alignment:
Q  700 tcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgtacaacgacaaaatgtctataaataatatgata 797  Q
    |||| ||||||||||||||| | ||| | | ||| || ||||| ||| ||   ||||||||||| ||||||| ||||||| ||| |||||||||||||    
T  53807701 tcaagatcgctaaaaacgtaaaggatgaatctgcgaacaaactcacaccacccaagttaatagcatacaacggcaaaatgcctacaaataatatgata 53807798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 666 - 850
Target Start/End: Original strand, 361588 - 361774
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgt 765  Q
    ||||| ||||||| | ||||| ||||||| |||||||||| ||||||||||||| | ||||| | ||| || | ||| |||||||  ||||||| | | |    
T  361588 atattcattcattcatattgagagattacatcattcaacaccgctaaaaacgtaaaggataaatctgcgaacacactcacaacatccaagttaacaacat 361687  T
Q  766 acaacgacaaaatgtctataaata-atatgatacaattaaagtgactggaatattcat-gcatccgtatctataacgttgatgtcca 850  Q
    | |||| || |||| ||| ||| | |||||| | |||||||||||||||| ||| ||| || |||| ||||| |||||||| |||||    
T  361688 ataacggcataatgcctacaaaaatatatgagaaaattaaagtgactggagtatccatggcctccggatctacaacgttgacgtcca 361774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 38; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 666 - 796
Target Start/End: Original strand, 57895 - 58027
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcat--tcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagc 763  Q
    ||||| ||||||||||||||||||| ||| |||   | |||||||||||||||||| | ||||| | ||| || ||||| ||| |||  |||||||||||    
T  57895 atattcattcatttaaattgatagaatacatcagaattaacatcgctaaaaacgtaaaggataaatctgcgaacaaactcacagcatccaagttaatagc 57994  T
Q  764 gtacaacgacaaaatgtctataaataatatgat 796  Q
     || |||| ||||||| ||| ||| ||||||||    
T  57995 atataacggcaaaatgcctacaaaaaatatgat 58027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 673 - 725
Target Start/End: Original strand, 36486 - 36538
Alignment:
Q  673 ttcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgat 725  Q
    |||||| ||||||||||| ||| |||||||||||||||||||||||| |||||    
T  36486 ttcattcaaattgatagagtacttcattcaacatcgctaaaaacgtaaatgat 36538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0445 (Bit Score: 36; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 702 - 797
Target Start/End: Complemental strand, 1588 - 1493
Alignment:
Q  702 aacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgtacaacgacaaaatgtctataaataatatgata 797  Q
    |||||||||||||||||| | | | | | |||||| ||||| |||||||  ||||||||||| || |||| ||||||| ||| |||||||||||||    
T  1588 aacatcgctaaaaacgtaaagggtgaatctgcaaacaaactcacaacatccaagttaatagcataaaacggcaaaatgcctacaaataatatgata 1493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 36; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 702 - 793
Target Start/End: Original strand, 71145 - 71236
Alignment:
Q  702 aacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgtacaacgacaaaatgtctataaataatat 793  Q
    |||||||||||||||||| | ||| | | | |||| ||||||||||||   ||||||||||| |||||| |||||||| ||| |||||||||    
T  71145 aacatcgctaaaaacgtaaaggattaatctacaaacaaacttacaacacccaagttaatagcatacaacaacaaaatgcctacaaataatat 71236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 666 - 804
Target Start/End: Original strand, 53207 - 53345
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgt 765  Q
    ||||| ||||||| ||||||||| | ||| |||||||||||| |||||||| || | ||||| | | | || ||||| ||||| |  || |||||||| |    
T  53207 atattcattcattcaaattgatatagtacatcattcaacatcactaaaaacataaaagataaatctacgaacaaactaacaacctccaatttaatagcat 53306  T
Q  766 acaacgacaaaatgtctataaataatatgatacaattaa 804  Q
    |||  ||||||||||||  | ||||||||||| ||||||    
T  53307 acagtgacaaaatgtctgcatataatatgataaaattaa 53345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 666 - 818
Target Start/End: Original strand, 16109 - 16262
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgt 765  Q
    ||||| ||||||| ||||||| | ||||| |||||||||| ||||||||||||| | ||  | |  || || ||||| ||| |||  ||||||||||| |    
T  16109 atattcattcattcaaattgagatattacatcattcaacaccgctaaaaacgtaaaggaagaatcagcgaacaaactcacatcatccaagttaatagcat 16208  T
Q  766 acaacgacaaaatgtctataaata-atatgatacaattaaagtgactggaatat 818  Q
    | ||||||| |||| ||| ||| | |||| ||| |||||||||||| |||||||    
T  16209 ataacgacataatgcctacaaaaatatataataaaattaaagtgaccggaatat 16262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 753 - 797
Target Start/End: Original strand, 65938 - 65982
Alignment:
Q  753 aagttaatagcgtacaacgacaaaatgtctataaataatatgata 797  Q
    ||||||||||| ||||||||||||||| ||| |||||||||||||    
T  65938 aagttaatagcatacaacgacaaaatgcctacaaataatatgata 65982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 731 - 797
Target Start/End: Complemental strand, 6245 - 6179
Alignment:
Q  731 tgcaaataaacttacaacatttaagttaatagcgtacaacgacaaaatgtctataaataatatgata 797  Q
    |||||| ||||| |||||||  ||||||||||| |  ||| |||||||||||| |||||||||||||    
T  6245 tgcaaacaaactcacaacatccaagttaatagcttgtaacaacaaaatgtctacaaataatatgata 6179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0443 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0443
Description:

Target: scaffold0443; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 666 - 719
Target Start/End: Complemental strand, 4493 - 4440
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgta 719  Q
    ||||| ||||||||||||  | ||||||| |||||||||| |||||||||||||    
T  4493 atattcattcatttaaatcaagagattacatcattcaacaccgctaaaaacgta 4440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0372 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0372
Description:

Target: scaffold0372; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 680 - 805
Target Start/End: Original strand, 9474 - 9599
Alignment:
Q  680 aaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagcgtacaacgacaaaatg 779  Q
    ||||||||||||||| |||||||| |||| |||||| | | | ||| | ||||| || ||||| || || |  |||||| || | |||||||||||||||    
T  9474 aaattgatagattacatcattcaagatcgttaaaaatggaaaggatgagtttgcgaacaaactcacgacttccaagttagtatcatacaacgacaaaatg 9573  T
Q  780 tctataaataatatgatacaattaaa 805  Q
    |  | || |||||||||| |||||||    
T  9574 ttgacaactaatatgataaaattaaa 9599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 753 - 850
Target Start/End: Complemental strand, 50969 - 50872
Alignment:
Q  753 aagttaatagcgtacaacgacaaaatgtctataaataatatgatacaattaaagtgactggaatattcatgcatccgtatctataacgttgatgtcca 850  Q
    ||||||||||| ||||| | ||||||| ||| ||||||||||||| || | |||| || | ||||| ||||| |||| ||||  |||||||| |||||    
T  50969 aagttaatagcatacaatggcaaaatgcctacaaataatatgataaaacttaagtcaccgaaatatccatgcttccggatctgcaacgttgacgtcca 50872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 666 - 763
Target Start/End: Original strand, 83226 - 83322
Alignment:
Q  666 atatttattcatttaaattgatagattacgtcattcaacatcgctaaaaacgtagatgataattttgcaaataaacttacaacatttaagttaatagc 763  Q
    ||||| ||||||| ||||  | ||||||| |||||||| ||||||||||||||| ||||| | | ||| || ||||| |||||||  |||||||||||    
T  83226 atattcattcattcaaatcaagagattacatcattcaa-atcgctaaaaacgtaaatgatgaatctgcgaacaaactcacaacatccaagttaatagc 83322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 738 - 859
Target Start/End: Original strand, 32628 - 32749
Alignment:
Q  738 aaacttacaacatttaagttaatagcgtacaacgacaaaatgtctataaataatatgatacaattaaagtgactggaatattcatgcatccgtatctata 837  Q
    ||||| |||||| | ||||||||||  |||| |||||||||| ||| ||||||||||||| |||  |||| || | |||| |||||| |||  ||||  |    
T  32628 aaactcacaacactcaagttaatagtatacagcgacaaaatgcctacaaataatatgataaaatctaagtcaccgaaatactcatgcttccagatctgca 32727  T
Q  838 acgttgatgtccatctcattgc 859  Q
    ||||||| |||||  |||||||    
T  32728 acgttgacgtccaaatcattgc 32749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University