View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11247_high_15 (Length: 337)

Name: NF11247_high_15
Description: NF11247
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11247_high_15
NF11247_high_15
[»] chr8 (26 HSPs)
chr8 (1-62)||(3961550-3961613)
chr8 (251-321)||(3961185-3961255)
chr8 (133-176)||(4611554-4611597)
chr8 (133-175)||(11803279-11803321)
chr8 (133-175)||(11927083-11927125)
chr8 (116-170)||(18964180-18964234)
chr8 (133-170)||(4786340-4786377)
chr8 (106-175)||(15816126-15816195)
chr8 (129-174)||(22493510-22493555)
chr8 (133-170)||(26902177-26902214)
chr8 (134-170)||(8847277-8847313)
chr8 (141-176)||(4122245-4122280)
chr8 (133-172)||(7658483-7658522)
chr8 (133-175)||(11944685-11944727)
chr8 (140-170)||(28384996-28385026)
chr8 (133-170)||(13844598-13844635)
chr8 (133-170)||(14134719-14134756)
chr8 (133-170)||(33382021-33382058)
chr8 (133-166)||(34897105-34897138)
chr8 (86-170)||(3951538-3951627)
chr8 (142-170)||(8293854-8293882)
chr8 (135-175)||(16867202-16867242)
chr8 (106-170)||(22595987-22596051)
chr8 (131-175)||(25566859-25566903)
chr8 (133-169)||(31236580-31236616)
chr8 (106-170)||(43737813-43737877)
[»] chr2 (25 HSPs)
chr2 (106-170)||(20242729-20242793)
chr2 (106-176)||(34784978-34785048)
chr2 (106-176)||(41843434-41843504)
chr2 (106-176)||(36096371-36096441)
chr2 (93-163)||(15909641-15909712)
chr2 (106-176)||(12668419-12668489)
chr2 (98-175)||(36756341-36756419)
chr2 (134-175)||(28524447-28524488)
chr2 (134-170)||(5367213-5367249)
chr2 (106-170)||(11223865-11223929)
chr2 (106-170)||(19536399-19536464)
chr2 (141-176)||(22550248-22550283)
chr2 (133-172)||(31808097-31808136)
chr2 (141-176)||(35056896-35056931)
chr2 (141-172)||(39279703-39279734)
chr2 (140-175)||(44860347-44860382)
chr2 (98-170)||(21624250-21624324)
chr2 (139-169)||(23718052-23718082)
chr2 (139-169)||(24105724-24105754)
chr2 (133-171)||(44605140-44605178)
chr2 (133-170)||(18889593-18889630)
chr2 (141-170)||(34691807-34691836)
chr2 (141-170)||(34714219-34714248)
chr2 (133-170)||(38355889-38355926)
chr2 (133-177)||(18420429-18420473)
[»] chr5 (25 HSPs)
chr5 (106-176)||(6401491-6401561)
chr5 (106-170)||(30099040-30099104)
chr5 (113-173)||(39758272-39758332)
chr5 (106-176)||(21814254-21814324)
chr5 (131-185)||(16374328-16374383)
chr5 (106-176)||(21522743-21522813)
chr5 (106-176)||(21533309-21533379)
chr5 (131-176)||(38749559-38749604)
chr5 (133-176)||(3966523-3966566)
chr5 (111-170)||(32426871-32426930)
chr5 (133-176)||(41091253-41091296)
chr5 (134-176)||(6035503-6035545)
chr5 (133-175)||(6471886-6471928)
chr5 (110-176)||(21542027-21542093)
chr5 (131-165)||(35904663-35904697)
chr5 (133-175)||(36838563-36838605)
chr5 (86-170)||(8419999-8420084)
chr5 (133-170)||(28588676-28588713)
chr5 (133-170)||(30502390-30502427)
chr5 (133-170)||(30542733-30542770)
chr5 (106-170)||(6247615-6247679)
chr5 (133-173)||(23015988-23016028)
chr5 (106-170)||(33178018-33178082)
chr5 (132-176)||(37328840-37328884)
chr5 (106-170)||(42029745-42029809)
[»] chr1 (42 HSPs)
chr1 (106-188)||(24577170-24577252)
chr1 (86-168)||(25934589-25934671)
chr1 (88-180)||(9828019-9828111)
chr1 (86-172)||(13997855-13997942)
chr1 (110-168)||(34315709-34315767)
chr1 (106-170)||(1815250-1815314)
chr1 (133-172)||(1864880-1864919)
chr1 (133-176)||(44482250-44482293)
chr1 (98-176)||(5944265-5944346)
chr1 (133-175)||(34371733-34371775)
chr1 (131-176)||(1486705-1486750)
chr1 (106-167)||(10577740-10577801)
chr1 (133-178)||(20157344-20157389)
chr1 (133-170)||(30749860-30749897)
chr1 (133-170)||(30771311-30771348)
chr1 (86-170)||(37598804-37598888)
chr1 (133-176)||(5376496-5376539)
chr1 (131-170)||(5898268-5898307)
chr1 (133-176)||(7918207-7918250)
chr1 (133-172)||(10233273-10233312)
chr1 (133-176)||(25361906-25361949)
chr1 (133-176)||(34712379-34712422)
chr1 (133-175)||(10572586-10572628)
chr1 (131-176)||(6612167-6612212)
chr1 (133-166)||(17705592-17705625)
chr1 (131-176)||(17754329-17754374)
chr1 (131-172)||(21378596-21378637)
chr1 (133-170)||(23636051-23636088)
chr1 (131-176)||(26837738-26837783)
chr1 (131-176)||(35919272-35919317)
chr1 (133-170)||(36878481-36878518)
chr1 (133-170)||(40181891-40181928)
chr1 (131-176)||(47989515-47989560)
chr1 (141-170)||(52903277-52903306)
chr1 (134-170)||(13436479-13436515)
chr1 (106-170)||(19058858-19058922)
chr1 (106-170)||(22881618-22881682)
chr1 (132-172)||(24462676-24462716)
chr1 (131-179)||(30173755-30173803)
chr1 (140-188)||(40285638-40285686)
chr1 (86-170)||(43492496-43492580)
chr1 (131-175)||(48148034-48148078)
[»] chr6 (30 HSPs)
chr6 (100-176)||(18367823-18367899)
chr6 (86-170)||(5626698-5626781)
chr6 (106-176)||(16488586-16488656)
chr6 (133-178)||(9025488-9025533)
chr6 (131-170)||(7027260-7027299)
chr6 (106-176)||(8931598-8931668)
chr6 (133-170)||(7265595-7265632)
chr6 (131-176)||(9522909-9522954)
chr6 (106-170)||(34595127-34595191)
chr6 (133-176)||(7086815-7086858)
chr6 (139-178)||(9027204-9027243)
chr6 (133-176)||(26562709-26562752)
chr6 (133-175)||(9195751-9195793)
chr6 (133-171)||(9658899-9658937)
chr6 (106-176)||(10770670-10770740)
chr6 (106-176)||(16766690-16766760)
chr6 (98-171)||(16833292-16833366)
chr6 (133-170)||(7377999-7378036)
chr6 (86-170)||(7801158-7801243)
chr6 (133-170)||(9617454-9617491)
chr6 (133-170)||(9629403-9629440)
chr6 (133-166)||(11591876-11591909)
chr6 (133-170)||(13360374-13360411)
chr6 (133-166)||(13851756-13851789)
chr6 (133-170)||(19040372-19040409)
chr6 (141-170)||(21924937-21924966)
chr6 (131-175)||(7973672-7973716)
chr6 (106-170)||(7977832-7977896)
chr6 (108-176)||(17327651-17327719)
chr6 (140-176)||(34073343-34073379)
[»] chr3 (26 HSPs)
chr3 (90-170)||(34910294-34910374)
chr3 (106-170)||(35222931-35222995)
chr3 (98-176)||(14209098-14209176)
chr3 (89-170)||(13414441-13414526)
chr3 (131-170)||(7928468-7928507)
chr3 (86-170)||(14027976-14028064)
chr3 (131-170)||(40993337-40993376)
chr3 (131-173)||(30184105-30184147)
chr3 (98-170)||(16000018-16000091)
chr3 (129-170)||(38731234-38731275)
chr3 (133-172)||(3962793-3962832)
chr3 (141-176)||(8039831-8039866)
chr3 (111-170)||(13845527-13845586)
chr3 (133-164)||(16192758-16192789)
chr3 (141-175)||(17005616-17005650)
chr3 (106-172)||(20503458-20503524)
chr3 (133-170)||(8789552-8789589)
chr3 (133-170)||(20691339-20691376)
chr3 (133-170)||(25093522-25093559)
chr3 (131-176)||(25948883-25948928)
chr3 (131-172)||(29508462-29508503)
chr3 (133-173)||(10690261-10690301)
chr3 (106-170)||(10954945-10955009)
chr3 (131-175)||(15314873-15314917)
chr3 (106-170)||(18426942-18427006)
chr3 (132-172)||(24633401-24633441)
[»] chr7 (25 HSPs)
chr7 (111-158)||(1656674-1656721)
chr7 (133-170)||(5835267-5835304)
chr7 (133-176)||(7328687-7328730)
chr7 (133-176)||(15902842-15902885)
chr7 (133-176)||(17307913-17307956)
chr7 (108-170)||(18213035-18213098)
chr7 (133-176)||(22602706-22602749)
chr7 (120-170)||(39138451-39138501)
chr7 (129-170)||(640129-640170)
chr7 (131-176)||(18013070-18013115)
chr7 (131-188)||(18039017-18039074)
chr7 (87-170)||(9408336-9408420)
chr7 (133-168)||(27732243-27732278)
chr7 (133-171)||(17851451-17851489)
chr7 (141-175)||(23128658-23128692)
chr7 (106-176)||(24339635-24339705)
chr7 (133-178)||(5233649-5233694)
chr7 (133-170)||(9482954-9482991)
chr7 (133-166)||(12278855-12278888)
chr7 (133-170)||(20549811-20549848)
chr7 (141-181)||(3142069-3142109)
chr7 (130-170)||(9949073-9949112)
chr7 (133-165)||(22868062-22868094)
chr7 (139-178)||(23849451-23849491)
chr7 (132-172)||(41020515-41020555)
[»] chr4 (14 HSPs)
chr4 (133-181)||(46160916-46160964)
chr4 (106-176)||(5414168-5414238)
chr4 (131-176)||(22234886-22234931)
chr4 (62-159)||(32273539-32273636)
chr4 (131-170)||(40179638-40179677)
chr4 (131-170)||(54580025-54580064)
chr4 (129-171)||(1213222-1213264)
chr4 (133-167)||(40613470-40613504)
chr4 (129-170)||(5555134-5555175)
chr4 (133-170)||(5775360-5775397)
chr4 (83-123)||(24543950-24543991)
chr4 (131-172)||(29205462-29205503)
chr4 (98-176)||(12708130-12708210)
chr4 (133-169)||(16189729-16189765)
[»] scaffold0050 (1 HSPs)
scaffold0050 (131-170)||(70296-70335)
[»] scaffold0171 (1 HSPs)
scaffold0171 (131-176)||(23438-23483)
[»] scaffold0020 (1 HSPs)
scaffold0020 (133-178)||(135306-135351)
[»] scaffold0623 (1 HSPs)
scaffold0623 (106-170)||(5998-6062)
[»] scaffold0116 (1 HSPs)
scaffold0116 (106-170)||(9891-9955)
[»] scaffold0110 (1 HSPs)
scaffold0110 (140-176)||(28877-28913)
[»] scaffold0123 (1 HSPs)
scaffold0123 (133-168)||(44529-44564)
[»] scaffold0022 (1 HSPs)
scaffold0022 (133-176)||(99913-99956)
[»] scaffold0036 (1 HSPs)
scaffold0036 (133-175)||(9744-9786)
[»] scaffold1528 (1 HSPs)
scaffold1528 (131-176)||(1053-1098)
[»] scaffold0004 (1 HSPs)
scaffold0004 (124-165)||(101011-101052)
[»] scaffold0044 (1 HSPs)
scaffold0044 (133-169)||(53200-53236)
[»] scaffold0025 (1 HSPs)
scaffold0025 (131-175)||(23788-23832)


Alignment Details
Target: chr8 (Bit Score: 49; Significance: 5e-19; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 3961613 - 3961550
Alignment:
Q  1 tttttagtaaatattcaaatttctatttttt--caaaaatatattctccttaattagtcattca 62  Q
    |||||||||||||||||||| ||||||||||  |||||||||||||||||||||||||||||||    
T  3961613 tttttagtaaatattcaaatatctattttttttcaaaaatatattctccttaattagtcattca 3961550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 251 - 321
Target Start/End: Complemental strand, 3961255 - 3961185
Alignment:
Q  251 gagaggagagtgtttgattgtatttagaaaagctcggccccctagaaggttgtggatttttcttggaaact 321  Q
    ||||||||||||||||||||||||| ||||||||| || ||||  ||||| |||| |||||||||||||||    
T  3961255 gagaggagagtgtttgattgtatttggaaaagctcagctccctcaaaggtcgtggctttttcttggaaact 3961185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 133 - 176
Target Start/End: Original strand, 4611554 - 4611597
Alignment:
Q  133 aaaataacataattcagtgtaattatatgtgtcggtgttgtgtc 176  Q
    |||||||||||||||||||||||||||||| |||||| ||||||    
T  4611554 aaaataacataattcagtgtaattatatgtctcggtgctgtgtc 4611597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 133 - 175
Target Start/End: Original strand, 11803279 - 11803321
Alignment:
Q  133 aaaataacataattcagtgtaattatatgtgtcggtgttgtgt 175  Q
    ||||| |||||||||||||||||||||||||| ||||||||||    
T  11803279 aaaatcacataattcagtgtaattatatgtgttggtgttgtgt 11803321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 133 - 175
Target Start/End: Complemental strand, 11927125 - 11927083
Alignment:
Q  133 aaaataacataattcagtgtaattatatgtgtcggtgttgtgt 175  Q
    ||||| |||||||||||||||||||||||||||||||| ||||    
T  11927125 aaaatcacataattcagtgtaattatatgtgtcggtgtcgtgt 11927083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 116 - 170
Target Start/End: Original strand, 18964180 - 18964234
Alignment:
Q  116 acaactaaatttgttaaaaaataacataattcagtgtaattatatgtgtcggtgt 170  Q
    |||||||| ||| ||| ||||| |||||||||| |||||||||||||||||||||    
T  18964180 acaactaatttttttagaaaatcacataattcaatgtaattatatgtgtcggtgt 18964234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 133 - 170
Target Start/End: Complemental strand, 4786377 - 4786340
Alignment:
Q  133 aaaataacataattcagtgtaattatatgtgtcggtgt 170  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  4786377 aaaatcacataattcagtgtaattatatgtgtcggtgt 4786340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 106 - 175
Target Start/End: Complemental strand, 15816195 - 15816126
Alignment:
Q  106 acacgccgacacaactaaatttgttaaaaaataacataattcagtgtaattatatgtgtcggtgttgtgt 175  Q
    ||||||||||||||||||   | | ||||||| |||||||| |||||||||||| |||||||||| ||||    
T  15816195 acacgccgacacaactaataatttgaaaaaatcacataatttagtgtaattataagtgtcggtgtcgtgt 15816126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 129 - 174
Target Start/End: Original strand, 22493510 - 22493555
Alignment:
Q  129 ttaaaaaataacataattcagtgtaattatatgtgtcggtgttgtg 174  Q
    ||||||||| ||||||||||||||||| |||| |||||||||||||    
T  22493510 ttaaaaaatcacataattcagtgtaatcatatatgtcggtgttgtg 22493555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 133 - 170
Target Start/End: Complemental strand, 26902214 - 26902177
Alignment:
Q  133 aaaataacataattcagtgtaattatatgtgtcggtgt 170  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  26902214 aaaatcacataattcagtgtaattatatgtgtcggtgt 26902177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 134 - 170
Target Start/End: Original strand, 8847277 - 8847313
Alignment:
Q  134 aaataacataattcagtgtaattatatgtgtcggtgt 170  Q
    |||| ||||||||||||||||||||||||||||||||    
T  8847277 aaatcacataattcagtgtaattatatgtgtcggtgt 8847313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 141 - 176
Target Start/End: Complemental strand, 4122280 - 4122245
Alignment:
Q  141 ataattcagtgtaattatatgtgtcggtgttgtgtc 176  Q
    |||||||| |||||||||||||||||||||||||||    
T  4122280 ataattcattgtaattatatgtgtcggtgttgtgtc 4122245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 133 - 172
Target Start/End: Original strand, 7658483 - 7658522
Alignment:
Q  133 aaaataacataattcagtgtaattatatgtgtcggtgttg 172  Q
    ||||| |||||||||||||||||||||| |||||||||||    
T  7658483 aaaattacataattcagtgtaattatatttgtcggtgttg 7658522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 133 - 175
Target Start/End: Original strand, 11944685 - 11944727
Alignment:
Q  133 aaaataacataattcagtgtaattatatgtgtcggtgttgtgt 175  Q
    ||||| |||||| ||||||||||||||||||||||||| ||||    
T  11944685 aaaatcacataactcagtgtaattatatgtgtcggtgtcgtgt 11944727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 140 - 170
Target Start/End: Complemental strand, 28385026 - 28384996
Alignment:
Q  140 cataattcagtgtaattatatgtgtcggtgt 170  Q
    |||||||||||||||||||||||||||||||    
T  28385026 cataattcagtgtaattatatgtgtcggtgt 28384996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 170
Target Start/End: Complemental strand, 13844635 - 13844598
Alignment:
Q  133 aaaataacataattcagtgtaattatatgtgtcggtgt 170  Q
    ||||| |||||||| |||||||||||||||||||||||    
T  13844635 aaaatcacataattgagtgtaattatatgtgtcggtgt 13844598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 170
Target Start/End: Original strand, 14134719 - 14134756
Alignment:
Q  133 aaaataacataattcagtgtaattatatgtgtcggtgt 170  Q
    ||||| |||||||||||||||||||||| |||||||||    
T  14134719 aaaatcacataattcagtgtaattatatatgtcggtgt 14134756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 170
Target Start/End: Complemental strand, 33382058 - 33382021
Alignment:
Q  133 aaaataacataattcagtgtaattatatgtgtcggtgt 170  Q
    ||||| ||||||||||| ||||||||||||||||||||    
T  33382058 aaaatgacataattcagagtaattatatgtgtcggtgt 33382021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 166
Target Start/End: Original strand, 34897105 - 34897138
Alignment:
Q  133 aaaataacataattcagtgtaattatatgtgtcg 166  Q
    ||||| ||||||||||||||||||||||||||||    
T  34897105 aaaatcacataattcagtgtaattatatgtgtcg 34897138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 86 - 170
Target Start/End: Complemental strand, 3951627 - 3951538
Alignment:
Q  86 ggacacggacaccagacactacacg----ccgacacaactaaatttgttaaaaaa-taacataattcagtgtaattatatgtgtcggtgt 170  Q
    |||||||||||||||| || |||||    |||||||| |||||||| | |||||| | ||| ||| ||||||| ||||||||||||||||    
T  3951627 ggacacggacaccagatacgacacggacaccgacacagctaaatttttaaaaaaaatcacaaaatgcagtgtacttatatgtgtcggtgt 3951538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 142 - 170
Target Start/End: Original strand, 8293854 - 8293882
Alignment:
Q  142 taattcagtgtaattatatgtgtcggtgt 170  Q
    |||||||||||||||||||||||||||||    
T  8293854 taattcagtgtaattatatgtgtcggtgt 8293882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 135 - 175
Target Start/End: Complemental strand, 16867242 - 16867202
Alignment:
Q  135 aataacataattcagtgtaattatatgtgtcggtgttgtgt 175  Q
    |||||||||||| |||||||||||| |||||||||| ||||    
T  16867242 aataacataatttagtgtaattataagtgtcggtgtcgtgt 16867202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 106 - 170
Target Start/End: Original strand, 22595987 - 22596051
Alignment:
Q  106 acacgccgacacaactaaatttgttaaaaaataacataattcagtgtaattatatgtgtcggtgt 170  Q
    ||||||||||||| ||||   | | ||||||||||||||||||||||||||| | |||| |||||    
T  22595987 acacgccgacacagctaataatttaaaaaaataacataattcagtgtaattacaagtgttggtgt 22596051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 131 - 175
Target Start/End: Original strand, 25566859 - 25566903
Alignment:
Q  131 aaaaaataacataattcagtgtaattatatgtgtcggtgttgtgt 175  Q
    ||||||| ||||||||||||||||||| | |||||||||| ||||    
T  25566859 aaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgt 25566903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 133 - 169
Target Start/End: Complemental strand, 31236616 - 31236580
Alignment:
Q  133 aaaataacataattcagtgtaattatatgtgtcggtg 169  Q
    ||||| |||||||||| ||||||||||||||||||||    
T  31236616 aaaatcacataattcaatgtaattatatgtgtcggtg 31236580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 106 - 170
Target Start/End: Complemental strand, 43737877 - 43737813
Alignment:
Q  106 acacgccgacacaactaaatttgttaaaaaataacataattcagtgtaattatatgtgtcggtgt 170  Q
    |||||||| |||| ||||||||  |  ||||| ||| ||| ||||||||||||||||||||||||    
T  43737877 acacgccggcacagctaaattttcttgaaaatcacaaaatacagtgtaattatatgtgtcggtgt 43737813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 49; Significance: 5e-19; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 106 - 170
Target Start/End: Complemental strand, 20242793 - 20242729
Alignment:
Q  106 acacgccgacacaactaaatttgttaaaaaataacataattcagtgtaattatatgtgtcggtgt 170  Q
    |||||||||||||||||| ||| ||| ||||| ||||||||||||||||||||||||||||||||    
T  20242793 acacgccgacacaactaatttttttagaaaatcacataattcagtgtaattatatgtgtcggtgt 20242729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 106 - 176
Target Start/End: Complemental strand, 34785048 - 34784978
Alignment:
Q  106 acacgccgacacaactaaatttgttaaaaaataacataattcagtgtaattatatgtgtcggtgttgtgtc 176  Q
    |||| ||||||||||||| ||| ||| ||||| |||||||| ||||||||||||||||||||||| |||||    
T  34785048 acacaccgacacaactaatttttttagaaaatcacataatttagtgtaattatatgtgtcggtgtcgtgtc 34784978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 106 - 176
Target Start/End: Original strand, 41843434 - 41843504
Alignment:
Q  106 acacgccgacacaactaaatttgttaaaaaataacataattcagtgtaattatatgtgtcggtgttgtgtc 176  Q
    ||||||||||| |||||||||| |||  |||| ||||||||| || |||||||||||||||||||||||||    
T  41843434 acacgccgacaaaactaaattttttaggaaatcacataattcggtataattatatgtgtcggtgttgtgtc 41843504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 106 - 176
Target Start/End: Complemental strand, 36096441 - 36096371
Alignment:
Q  106 acacgccgacacaactaaatttgttaaaaaataacataattcagtgtaattatatgtgtcggtgttgtgtc 176  Q
    ||||||||||||| |||||||| ||| ||||| ||| ||| |||||||||||||| ||||||||| |||||    
T  36096441 acacgccgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatttgtcggtgtcgtgtc 36096371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 93 - 163
Target Start/End: Complemental strand, 15909712 - 15909641
Alignment:
Q  93 gacaccagacact-acacgccgacacaactaaatttgttaaaaaataacataattcagtgtaattatatgtg 163  Q
    ||||||||||||| ||||||||| ||| ||||| || | | ||||| |||||||||||||||||||||||||    
T  15909712 gacaccagacactgacacgccgatacagctaaaattttgagaaaattacataattcagtgtaattatatgtg 15909641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 106 - 176
Target Start/End: Complemental strand, 12668489 - 12668419
Alignment:
Q  106 acacgccgacacaactaaatttgttaaaaaataacataattcagtgtaattatatgtgtcggtgttgtgtc 176  Q
    ||||||||||| ||||||   | | ||||||| ||||||||||||||||||||| |||||||||| |||||    
T  12668489 acacgccgacataactaataatttgaaaaaatgacataattcagtgtaattataagtgtcggtgtcgtgtc 12668419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 98 - 175
Target Start/End: Complemental strand, 36756419 - 36756341
Alignment:
Q  98 cagacact-acacgccgacacaactaaatttgttaaaaaataacataattcagtgtaattatatgtgtcggtgttgtgt 175  Q
    |||||||| ||||| ||||||||||||   | | || |||||||||||||||||||||||||| |||||||||| ||||    
T  36756419 cagacactgacacgtcgacacaactaataatttgaagaaataacataattcagtgtaattataagtgtcggtgtcgtgt 36756341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 134 - 175
Target Start/End: Original strand, 28524447 - 28524488
Alignment:
Q  134 aaataacataattcagtgtaattatatgtgtcggtgttgtgt 175  Q
    |||| |||||||||||||||||||||||||||| ||||||||    
T  28524447 aaatcacataattcagtgtaattatatgtgtcgttgttgtgt 28524488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 134 - 170
Target Start/End: Original strand, 5367213 - 5367249
Alignment:
Q  134 aaataacataattcagtgtaattatatgtgtcggtgt 170  Q
    |||| ||||||||||||||||||||||||||||||||    
T  5367213 aaatcacataattcagtgtaattatatgtgtcggtgt 5367249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 170
Target Start/End: Complemental strand, 11223929 - 11223865
Alignment:
Q  106 acacgccgacacaactaaatttgttaaaaaataacataattcagtgtaattatatgtgtcggtgt 170  Q
    |||||| |||||| ||||  || | ||||||||||||||||||||||||||| | ||||||||||    
T  11223929 acacgctgacacagctaatattttgaaaaaataacataattcagtgtaattacaagtgtcggtgt 11223865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 106 - 170
Target Start/End: Complemental strand, 19536464 - 19536399
Alignment:
Q  106 acacgccgacacaactaa--atttgttaaaaaataacataattcagtgtaattatatgtgtcggtgt 170  Q
    ||||||||||||||||||  |||||  ||||||| ||||||||||||||||||| | ||||||||||    
T  19536464 acacgccgacacaactaataatttga-aaaaaatcacataattcagtgtaattacaagtgtcggtgt 19536399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 141 - 176
Target Start/End: Complemental strand, 22550283 - 22550248
Alignment:
Q  141 ataattcagtgtaattatatgtgtcggtgttgtgtc 176  Q
    ||||||||||||||||||||||||| ||||||||||    
T  22550283 ataattcagtgtaattatatgtgtcagtgttgtgtc 22550248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 133 - 172
Target Start/End: Original strand, 31808097 - 31808136
Alignment:
Q  133 aaaataacataattcagtgtaattatatgtgtcggtgttg 172  Q
    ||||| ||||||||||||||||||||||||||| ||||||    
T  31808097 aaaatcacataattcagtgtaattatatgtgtcagtgttg 31808136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 141 - 176
Target Start/End: Original strand, 35056896 - 35056931
Alignment:
Q  141 ataattcagtgtaattatatgtgtcggtgttgtgtc 176  Q
    |||||||||||||||||||||||||||||| |||||    
T  35056896 ataattcagtgtaattatatgtgtcggtgtcgtgtc 35056931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 141 - 172
Target Start/End: Original strand, 39279703 - 39279734
Alignment:
Q  141 ataattcagtgtaattatatgtgtcggtgttg 172  Q
    ||||||||||||||||||||||||||||||||    
T  39279703 ataattcagtgtaattatatgtgtcggtgttg 39279734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 140 - 175
Target Start/End: Original strand, 44860347 - 44860382
Alignment:
Q  140 cataattcagtgtaattatatgtgtcggtgttgtgt 175  Q
    ||||||||||||||||||||||||||||||| ||||    
T  44860347 cataattcagtgtaattatatgtgtcggtgtcgtgt 44860382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 170
Target Start/End: Original strand, 21624250 - 21624324
Alignment:
Q  98 cagacact-acacgccgacacaactaa-atttgttaaaaaataacataattcagtgtaattatatgtgtcggtgt 170  Q
    |||||||| ||||||||||||| |||| | || | |||||||| |||||||||||||||||| | ||||||||||    
T  21624250 cagacactgacacgccgacacagctaataattttaaaaaaatagcataattcagtgtaattacaagtgtcggtgt 21624324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 139 - 169
Target Start/End: Original strand, 23718052 - 23718082
Alignment:
Q  139 acataattcagtgtaattatatgtgtcggtg 169  Q
    |||||||||||||||||||||||||||||||    
T  23718052 acataattcagtgtaattatatgtgtcggtg 23718082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 139 - 169
Target Start/End: Original strand, 24105724 - 24105754
Alignment:
Q  139 acataattcagtgtaattatatgtgtcggtg 169  Q
    |||||||||||||||||||||||||||||||    
T  24105724 acataattcagtgtaattatatgtgtcggtg 24105754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 133 - 171
Target Start/End: Complemental strand, 44605178 - 44605140
Alignment:
Q  133 aaaataacataattcagtgtaattatatgtgtcggtgtt 171  Q
    |||||||||||||||| |||||||| |||||||||||||    
T  44605178 aaaataacataattcaatgtaattacatgtgtcggtgtt 44605140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 170
Target Start/End: Complemental strand, 18889630 - 18889593
Alignment:
Q  133 aaaataacataattcagtgtaattatatgtgtcggtgt 170  Q
    ||||| ||||||||||||||||| ||||||||||||||    
T  18889630 aaaatcacataattcagtgtaatcatatgtgtcggtgt 18889593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 170
Target Start/End: Complemental strand, 34691836 - 34691807
Alignment:
Q  141 ataattcagtgtaattatatgtgtcggtgt 170  Q
    ||||||||||||||||||||||||||||||    
T  34691836 ataattcagtgtaattatatgtgtcggtgt 34691807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 170
Target Start/End: Complemental strand, 34714248 - 34714219
Alignment:
Q  141 ataattcagtgtaattatatgtgtcggtgt 170  Q
    ||||||||||||||||||||||||||||||    
T  34714248 ataattcagtgtaattatatgtgtcggtgt 34714219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 170
Target Start/End: Complemental strand, 38355926 - 38355889
Alignment:
Q  133 aaaataacataattcagtgtaattatatgtgtcggtgt 170  Q
    ||||| |||||||||||||| |||||||||||||||||    
T  38355926 aaaatcacataattcagtgtgattatatgtgtcggtgt 38355889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 133 - 177
Target Start/End: Complemental strand, 18420473 - 18420429
Alignment:
Q  133 aaaataacataattcagtgtaattatatgtgtcggtgttgtgtcc 177  Q
    ||||| |||||||||| || ||||||| |||||||||||||||||    
T  18420473 aaaatcacataattcaatgcaattataagtgtcggtgttgtgtcc 18420429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 47; Significance: 8e-18; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 106 - 176
Target Start/End: Original strand, 6401491 - 6401561
Alignment:
Q  106 acacgccgacacaactaaatttgttaaaaaataacataattcagtgtaattatatgtgtcggtgttgtgtc 176  Q
    |||||||||||||||||||||| ||| ||||| ||| ||| |||||||||||||||||||||||| |||||    
T  6401491 acacgccgacacaactaaattttttagaaaatcacaaaatacagtgtaattatatgtgtcggtgtcgtgtc 6401561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 106 - 170
Target Start/End: Complemental strand, 30099104 - 30099040
Alignment:
Q  106 acacgccgacacaactaaatttgttaaaaaataacataattcagtgtaattatatgtgtcggtgt 170  Q
    |||||||||||||||||||||| ||||| |||  |||||||| ||||||||||||||||||||||    
T  30099104 acacgccgacacaactaaattttttaaacaatcgcataattctgtgtaattatatgtgtcggtgt 30099040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 113 - 173
Target Start/End: Original strand, 39758272 - 39758332
Alignment:
Q  113 gacacaactaaatttgttaaaaaataacataattcagtgtaattatatgtgtcggtgttgt 173  Q
    |||||| |||||||| ||| ||||| |||||||||||||||||||||||||||||| ||||    
T  39758272 gacacagctaaattttttagaaaatcacataattcagtgtaattatatgtgtcggtattgt 39758332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 106 - 176
Target Start/End: Original strand, 21814254 - 21814324
Alignment:
Q  106 acacgccgacacaactaaatttgttaaaaaataacataattcagtgtaattatatgtgtcggtgttgtgtc 176  Q
    ||||||||||||| |||| ||| ||| ||||| ||| ||| |||||||||||||||||||||||| |||||    
T  21814254 acacgccgacacagctaatttttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcgtgtc 21814324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 131 - 185
Target Start/End: Complemental strand, 16374383 - 16374328
Alignment:
Q  131 aaaaaataacataattcagtgtaattatatgtgtcggtgttgtgtc-cgtgcttca 185  Q
    |||||||||||||| |||||||||||| |||||||||||| ||||| |||||||||    
T  16374383 aaaaaataacataaatcagtgtaattacatgtgtcggtgtcgtgtcacgtgcttca 16374328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 106 - 176
Target Start/End: Original strand, 21522743 - 21522813
Alignment:
Q  106 acacgccgacacaactaaatttgttaaaaaataacataattcagtgtaattatatgtgtcggtgttgtgtc 176  Q
    ||||||||||||| ||||   | ||||||||||||||||||||||||||||| |  ||||||||| |||||    
T  21522743 acacgccgacacagctaataattttaaaaaataacataattcagtgtaattacaattgtcggtgtcgtgtc 21522813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 106 - 176
Target Start/End: Original strand, 21533309 - 21533379
Alignment:
Q  106 acacgccgacacaactaaatttgttaaaaaataacataattcagtgtaattatatgtgtcggtgttgtgtc 176  Q
    ||||||||||||| ||||   | ||||||||||||||||||||||||||||| |  ||||||||| |||||    
T  21533309 acacgccgacacagctaataattttaaaaaataacataattcagtgtaattacaattgtcggtgtcgtgtc 21533379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 131 - 176
Target Start/End: Complemental strand, 38749604 - 38749559
Alignment:
Q  131 aaaaaataacataattcagtgtaattatatgtgtcggtgttgtgtc 176  Q
    ||||||| |||||||||| ||||||||||||||| |||||||||||    
T  38749604 aaaaaatgacataattcaatgtaattatatgtgttggtgttgtgtc 38749559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 133 - 176
Target Start/End: Original strand, 3966523 - 3966566
Alignment:
Q  133 aaaataacataattcagtgtaattatatgtgtcggtgttgtgtc 176  Q
    ||||| ||| |||||||||||||||||||||||||||| |||||    
T  3966523 aaaatcacacaattcagtgtaattatatgtgtcggtgtcgtgtc 3966566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 111 - 170
Target Start/End: Complemental strand, 32426930 - 32426871
Alignment:
Q  111 ccgacacaactaaatttgttaaaaaataacataattcagtgtaattatatgtgtcggtgt 170  Q
    |||||||  |||||||| ||| ||||| |||||||||| ||||||||| |||||||||||    
T  32426930 ccgacacggctaaattttttagaaaatcacataattcattgtaattatttgtgtcggtgt 32426871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 133 - 176
Target Start/End: Complemental strand, 41091296 - 41091253
Alignment:
Q  133 aaaataacataattcagtgtaattatatgtgtcggtgttgtgtc 176  Q
    ||||| |||||||||||||||||||||||||||| ||| |||||    
T  41091296 aaaatcacataattcagtgtaattatatgtgtcgatgtcgtgtc 41091253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 176
Target Start/End: Original strand, 6035503 - 6035545
Alignment:
Q  134 aaataacataattcagtgtaattatatgtgtcggtgttgtgtc 176  Q
    |||||| |||||||||||||||||||| ||||||||| |||||    
T  6035503 aaataatataattcagtgtaattatatttgtcggtgtcgtgtc 6035545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 133 - 175
Target Start/End: Complemental strand, 6471928 - 6471886
Alignment:
Q  133 aaaataacataattcagtgtaattatatgtgtcggtgttgtgt 175  Q
    ||||| |||||||||||||||||||||||||| ||||| ||||    
T  6471928 aaaatcacataattcagtgtaattatatgtgtgggtgtcgtgt 6471886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 110 - 176
Target Start/End: Original strand, 21542027 - 21542093
Alignment:
Q  110 gccgacacaactaaatttgttaaaaaataacataattcagtgtaattatatgtgtcggtgttgtgtc 176  Q
    ||||||||||||||   | | |||| |||||||||||||||||||||| | |||||||||| |||||    
T  21542027 gccgacacaactaataatttaaaaagataacataattcagtgtaattacaagtgtcggtgtcgtgtc 21542093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 131 - 165
Target Start/End: Original strand, 35904663 - 35904697
Alignment:
Q  131 aaaaaataacataattcagtgtaattatatgtgtc 165  Q
    |||||||||| ||||||||||||||||||||||||    
T  35904663 aaaaaataacttaattcagtgtaattatatgtgtc 35904697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 133 - 175
Target Start/End: Original strand, 36838563 - 36838605
Alignment:
Q  133 aaaataacataattcagtgtaattatatgtgtcggtgttgtgt 175  Q
    ||||| |||||||| ||||||||||||||||||||||| ||||    
T  36838563 aaaattacataatttagtgtaattatatgtgtcggtgtcgtgt 36838605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 170
Target Start/End: Original strand, 8419999 - 8420084
Alignment:
Q  86 ggacacggacaccagacact-acacgccgacacaactaaatttgttaaaaaataacataattcagtgtaattatatgtgtcggtgt 170  Q
    ||||||||||||| |||| | ||||||||||| | ||||   | | |||||||||||||||||| |||||||| | ||||||||||    
T  8419999 ggacacggacaccggacaatgacacgccgacatagctaataatttgaaaaaataacataattcaatgtaattacaagtgtcggtgt 8420084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 170
Target Start/End: Complemental strand, 28588713 - 28588676
Alignment:
Q  133 aaaataacataattcagtgtaattatatgtgtcggtgt 170  Q
    ||||| ||||||||||||||||||||| ||||||||||    
T  28588713 aaaatcacataattcagtgtaattataggtgtcggtgt 28588676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 170
Target Start/End: Complemental strand, 30502427 - 30502390
Alignment:
Q  133 aaaataacataattcagtgtaattatatgtgtcggtgt 170  Q
    ||||| || |||||||||||||||||||||||||||||    
T  30502427 aaaatcacttaattcagtgtaattatatgtgtcggtgt 30502390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 170
Target Start/End: Complemental strand, 30542770 - 30542733
Alignment:
Q  133 aaaataacataattcagtgtaattatatgtgtcggtgt 170  Q
    ||||| || |||||||||||||||||||||||||||||    
T  30542770 aaaatcacttaattcagtgtaattatatgtgtcggtgt 30542733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 106 - 170
Target Start/End: Original strand, 6247615 - 6247679
Alignment:
Q  106 acacgccgacacaactaaatttgttaaaaaataacataattcagtgtaattatatgtgtcggtgt 170  Q
    ||||||||||||| ||||   | | ||||||| ||||||||||||||||||| | ||||||||||    
T  6247615 acacgccgacacatctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgt 6247679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 133 - 173
Target Start/End: Complemental strand, 23016028 - 23015988
Alignment:
Q  133 aaaataacataattcagtgtaattatatgtgtcggtgttgt 173  Q
    ||||| ||||||||||||||||||||| |||||| ||||||    
T  23016028 aaaatcacataattcagtgtaattataggtgtcgatgttgt 23015988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 106 - 170
Target Start/End: Original strand, 33178018 - 33178082
Alignment:
Q  106 acacgccgacacaactaaatttgttaaaaaataacataattcagtgtaattatatgtgtcggtgt 170  Q
    ||||||||||||||||||   | | ||||||| |||||||| |||||||||| | ||||||||||    
T  33178018 acacgccgacacaactaataatttaaaaaaatcacataatttagtgtaattacaagtgtcggtgt 33178082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 132 - 176
Target Start/End: Complemental strand, 37328884 - 37328840
Alignment:
Q  132 aaaaataacataattcagtgtaattatatgtgtcggtgttgtgtc 176  Q
    |||||| ||| ||||||||||||||| |||||||||||| |||||    
T  37328884 aaaaatcacaaaattcagtgtaattacatgtgtcggtgtcgtgtc 37328840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 106 - 170
Target Start/End: Original strand, 42029745 - 42029809
Alignment:
Q  106 acacgccgacacaactaaatttgttaaaaaataacataattcagtgtaattatatgtgtcggtgt 170  Q
    |||||||||||||| ||||    ||| ||||| |||||||||| ||||||||||||| |||||||    
T  42029745 acacgccgacacaattaaaaaatttagaaaatcacataattcaatgtaattatatgtatcggtgt 42029809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 106 - 188
Target Start/End: Complemental strand, 24577252 - 24577170
Alignment:
Q  106 acacgccgacacaactaaatttgttaaaaaataacataattcagtgtaattatatgtgtcggtgttgtgtccgtgcttcatag 188  Q
    |||||| |||||||||||   | | ||||||| ||||||||||||||||||| | |||||||||| |||||||||||||||||    
T  24577252 acacgctgacacaactaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtccgtgcttcatag 24577170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 86 - 168
Target Start/End: Original strand, 25934589 - 25934671
Alignment:
Q  86 ggacacggacaccagacactacacgccgacacaactaaatttgttaaaaaataacataattcagtgtaattatatgtgtcggt 168  Q
    ||||||||||||| ||||  ||||||||||||| ||||||||  || ||||| ||| ||| ||||||||||||||||||||||    
T  25934589 ggacacggacaccggacatgacacgccgacacagctaaattttctagaaaatcacaaaatacagtgtaattatatgtgtcggt 25934671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 88 - 180
Target Start/End: Original strand, 9828019 - 9828111
Alignment:
Q  88 acacggacaccagacactacacgccgacacaactaaatttgttaaaaaataacataattcagtgtaattatatgtgtcggtgttgtgtccgtg 180  Q
    |||| |||||| ||||| |||||||||||| |||||   | | | ||||| |||||||||||||||||| ||||||||||||| |||||||||    
T  9828019 acacagacaccggacacgacacgccgacaccactaataatttgataaaatcacataattcagtgtaattttatgtgtcggtgtcgtgtccgtg 9828111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 86 - 172
Target Start/End: Original strand, 13997855 - 13997942
Alignment:
Q  86 ggacacggacaccagacact-acacgccgacacaactaaatttgttaaaaaataacataattcagtgtaattatatgtgtcggtgttg 172  Q
    ||||| ||| |||||||||| ||||||||||||   ||| | | | ||||||| ||||||||||||||||||||||||||||||||||    
T  13997855 ggacatggataccagacactgacacgccgacaccgttaattatttaaaaaaatcacataattcagtgtaattatatgtgtcggtgttg 13997942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 110 - 168
Target Start/End: Original strand, 34315709 - 34315767
Alignment:
Q  110 gccgacacaactaaatttgttaaaaaataacataattcagtgtaattatatgtgtcggt 168  Q
    ||||||||| |||||||| ||||||||  ||||||||| ||||||||||||||||||||    
T  34315709 gccgacacagctaaattttttaaaaaactacataattcggtgtaattatatgtgtcggt 34315767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 106 - 170
Target Start/End: Original strand, 1815250 - 1815314
Alignment:
Q  106 acacgccgacacaactaaatttgttaaaaaataacataattcagtgtaattatatgtgtcggtgt 170  Q
    |||||||||||||| ||| | | ||||||||| ||||||||||||||||||| | ||||||||||    
T  1815250 acacgccgacacaaataattattttaaaaaatcacataattcagtgtaattacaagtgtcggtgt 1815314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 133 - 172
Target Start/End: Complemental strand, 1864919 - 1864880
Alignment:
Q  133 aaaataacataattcagtgtaattatatgtgtcggtgttg 172  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  1864919 aaaatcacataattcagtgtaattatatgtgtcggtgttg 1864880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 133 - 176
Target Start/End: Original strand, 44482250 - 44482293
Alignment:
Q  133 aaaataacataattcagtgtaattatatgtgtcggtgttgtgtc 176  Q
    ||||| |||||||||||||||||||||||||||||||| |||||    
T  44482250 aaaatcacataattcagtgtaattatatgtgtcggtgtcgtgtc 44482293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 98 - 176
Target Start/End: Original strand, 5944265 - 5944346
Alignment:
Q  98 cagacact-acacgccgacacaactaa--atttgttaaaaaataacataattcagtgtaattatatgtgtcggtgttgtgtc 176  Q
    |||||||| |||||||| |||| ||||  |||||  ||||||| ||||||||||||||||||||| |||||||||| |||||    
T  5944265 cagacactgacacgccgccacagctaataatttgaaaaaaaatcacataattcagtgtaattataagtgtcggtgtcgtgtc 5944346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 133 - 175
Target Start/End: Original strand, 34371733 - 34371775
Alignment:
Q  133 aaaataacataattcagtgtaattatatgtgtcggtgttgtgt 175  Q
    ||||| |||||||||||||||||||||||||||||||| ||||    
T  34371733 aaaatcacataattcagtgtaattatatgtgtcggtgtcgtgt 34371775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 131 - 176
Target Start/End: Complemental strand, 1486750 - 1486705
Alignment:
Q  131 aaaaaataacataattcagtgtaattatatgtgtcggtgttgtgtc 176  Q
    ||||||| ||||||||||||||||||||| |||||||||| |||||    
T  1486750 aaaaaatcacataattcagtgtaattataagtgtcggtgtcgtgtc 1486705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 106 - 167
Target Start/End: Complemental strand, 10577801 - 10577740
Alignment:
Q  106 acacgccgacacaactaaatttgttaaaaaataacataattcagtgtaattatatgtgtcgg 167  Q
    ||||||||||||| |||| ||| ||| ||||| ||| ||| |||||||||||||||||||||    
T  10577801 acacgccgacacagctaatttttttagaaaatcacaaaatgcagtgtaattatatgtgtcgg 10577740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 133 - 178
Target Start/End: Complemental strand, 20157389 - 20157344
Alignment:
Q  133 aaaataacataattcagtgtaattatatgtgtcggtgttgtgtccg 178  Q
    ||||| ||||||||||||||||| |||||||||||||| |||||||    
T  20157389 aaaatcacataattcagtgtaatcatatgtgtcggtgtcgtgtccg 20157344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 133 - 170
Target Start/End: Original strand, 30749860 - 30749897
Alignment:
Q  133 aaaataacataattcagtgtaattatatgtgtcggtgt 170  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  30749860 aaaatcacataattcagtgtaattatatgtgtcggtgt 30749897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 133 - 170
Target Start/End: Original strand, 30771311 - 30771348
Alignment:
Q  133 aaaataacataattcagtgtaattatatgtgtcggtgt 170  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  30771311 aaaatcacataattcagtgtaattatatgtgtcggtgt 30771348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 86 - 170
Target Start/End: Original strand, 37598804 - 37598888
Alignment:
Q  86 ggacacggacaccagacact-acacgccgacacaactaaatttgttaaaaaataacataattcagtgtaattatatgtgtcggtgt 170  Q
    |||||| |||||| |||||| ||||||||||||||||||   | | ||||||| ||| ||||||||||||||||| ||||||||||    
T  37598804 ggacacagacaccggacactgacacgccgacacaactaataatttgaaaaaatcaca-aattcagtgtaattataagtgtcggtgt 37598888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 133 - 176
Target Start/End: Complemental strand, 5376539 - 5376496
Alignment:
Q  133 aaaataacataattcagtgtaattatatgtgtcggtgttgtgtc 176  Q
    ||||||||||||||||||||||||| | |||||||||| |||||    
T  5376539 aaaataacataattcagtgtaattaaaagtgtcggtgtcgtgtc 5376496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 131 - 170
Target Start/End: Complemental strand, 5898307 - 5898268
Alignment:
Q  131 aaaaaataacataattcagtgtaattatatgtgtcggtgt 170  Q
    ||||||| ||||||||||||||||||||||| ||||||||    
T  5898307 aaaaaatcacataattcagtgtaattatatgcgtcggtgt 5898268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 133 - 176
Target Start/End: Complemental strand, 7918250 - 7918207
Alignment:
Q  133 aaaataacataattcagtgtaattatatgtgtcggtgttgtgtc 176  Q
    ||||| ||||||||||||||||||||||||||| |||| |||||    
T  7918250 aaaatcacataattcagtgtaattatatgtgtcagtgtcgtgtc 7918207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 133 - 172
Target Start/End: Original strand, 10233273 - 10233312
Alignment:
Q  133 aaaataacataattcagtgtaattatatgtgtcggtgttg 172  Q
    ||||| ||||||||||||||||||||||||||| ||||||    
T  10233273 aaaatcacataattcagtgtaattatatgtgtctgtgttg 10233312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 133 - 176
Target Start/End: Original strand, 25361906 - 25361949
Alignment:
Q  133 aaaataacataattcagtgtaattatatgtgtcggtgttgtgtc 176  Q
    ||||| ||||||||||||||||||||||||||| |||| |||||    
T  25361906 aaaatcacataattcagtgtaattatatgtgtcagtgtcgtgtc 25361949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 133 - 176
Target Start/End: Complemental strand, 34712422 - 34712379
Alignment:
Q  133 aaaataacataattcagtgtaattatatgtgtcggtgttgtgtc 176  Q
    |||||||||||||| |||||||||||||||||| |||| |||||    
T  34712422 aaaataacataatttagtgtaattatatgtgtcagtgtcgtgtc 34712379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 133 - 175
Target Start/End: Complemental strand, 10572628 - 10572586
Alignment:
Q  133 aaaataacataattcagtgtaattatatgtgtcggtgttgtgt 175  Q
    ||||| ||||||||| ||||||||| |||||||||||||||||    
T  10572628 aaaatcacataattcggtgtaattaaatgtgtcggtgttgtgt 10572586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 176
Target Start/End: Complemental strand, 6612212 - 6612167
Alignment:
Q  131 aaaaaataacataattcagtgtaattatatgtgtcggtgttgtgtc 176  Q
    ||||||| ||||||||||||||||||| | |||||||||| |||||    
T  6612212 aaaaaattacataattcagtgtaattacaagtgtcggtgtcgtgtc 6612167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 166
Target Start/End: Complemental strand, 17705625 - 17705592
Alignment:
Q  133 aaaataacataattcagtgtaattatatgtgtcg 166  Q
    ||||| ||||||||||||||||||||||||||||    
T  17705625 aaaatcacataattcagtgtaattatatgtgtcg 17705592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 176
Target Start/End: Original strand, 17754329 - 17754374
Alignment:
Q  131 aaaaaataacataattcagtgtaattatatgtgtcggtgttgtgtc 176  Q
    ||||||| |||||||||||||||| |||||||||| |||| |||||    
T  17754329 aaaaaattacataattcagtgtaactatatgtgtcagtgtggtgtc 17754374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 21378596 - 21378637
Alignment:
Q  131 aaaaaataacataattcagtgtaattatatgtgtcggtgttg 172  Q
    ||||||| ||||||||||||||||||| | ||||||||||||    
T  21378596 aaaaaattacataattcagtgtaattacaagtgtcggtgttg 21378637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 170
Target Start/End: Complemental strand, 23636088 - 23636051
Alignment:
Q  133 aaaataacataattcagtgtaattatatgtgtcggtgt 170  Q
    ||||| |||||||||||||||||| |||||||||||||    
T  23636088 aaaattacataattcagtgtaattgtatgtgtcggtgt 23636051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 176
Target Start/End: Complemental strand, 26837783 - 26837738
Alignment:
Q  131 aaaaaataacataattcagtgtaattatatgtgtcggtgttgtgtc 176  Q
    ||||||||| |||||| |||||||||||||| ||| ||||||||||    
T  26837783 aaaaaataatataatttagtgtaattatatgagtcagtgttgtgtc 26837738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 176
Target Start/End: Complemental strand, 35919317 - 35919272
Alignment:
Q  131 aaaaaataacataattcagtgtaattatatgtgtcggtgttgtgtc 176  Q
    ||||||| ||||||||||||||||||||| ||||| |||| |||||    
T  35919317 aaaaaatcacataattcagtgtaattataagtgtccgtgtcgtgtc 35919272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 170
Target Start/End: Original strand, 36878481 - 36878518
Alignment:
Q  133 aaaataacataattcagtgtaattatatgtgtcggtgt 170  Q
    ||||| ||||||||||||||||||||| ||||||||||    
T  36878481 aaaatcacataattcagtgtaattataggtgtcggtgt 36878518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 170
Target Start/End: Original strand, 40181891 - 40181928
Alignment:
Q  133 aaaataacataattcagtgtaattatatgtgtcggtgt 170  Q
    ||||| |||||||||||||||||||||||| |||||||    
T  40181891 aaaatcacataattcagtgtaattatatgtatcggtgt 40181928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 176
Target Start/End: Original strand, 47989515 - 47989560
Alignment:
Q  131 aaaaaataacataattcagtgtaattatatgtgtcggtgttgtgtc 176  Q
    ||||||| ||||||||||||||||||| | |||||||||| |||||    
T  47989515 aaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtc 47989560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 170
Target Start/End: Original strand, 52903277 - 52903306
Alignment:
Q  141 ataattcagtgtaattatatgtgtcggtgt 170  Q
    ||||||||||||||||||||||||||||||    
T  52903277 ataattcagtgtaattatatgtgtcggtgt 52903306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 134 - 170
Target Start/End: Original strand, 13436479 - 13436515
Alignment:
Q  134 aaataacataattcagtgtaattatatgtgtcggtgt 170  Q
    |||| |||||||||||||||||||||||||| |||||    
T  13436479 aaatcacataattcagtgtaattatatgtgttggtgt 13436515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 106 - 170
Target Start/End: Complemental strand, 19058922 - 19058858
Alignment:
Q  106 acacgccgacacaactaaatttgttaaaaaataacataattcagtgtaattatatgtgtcggtgt 170  Q
    ||||||||||||| ||||   | | |||| |||||||||||||||||||||| | ||||||||||    
T  19058922 acacgccgacacagctaataatttaaaaagataacataattcagtgtaattacaagtgtcggtgt 19058858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 106 - 170
Target Start/End: Complemental strand, 22881682 - 22881618
Alignment:
Q  106 acacgccgacacaactaaatttgttaaaaaataacataattcagtgtaattatatgtgtcggtgt 170  Q
    ||||||||||||||||||   | | ||||||| |||||||| |||||||||| | ||||||||||    
T  22881682 acacgccgacacaactaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgt 22881618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 132 - 172
Target Start/End: Complemental strand, 24462716 - 24462676
Alignment:
Q  132 aaaaataacataattcagtgtaattatatgtgtcggtgttg 172  Q
    |||||| | |||||||||||||||||||| |||||||||||    
T  24462716 aaaaattatataattcagtgtaattatatctgtcggtgttg 24462676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 131 - 179
Target Start/End: Complemental strand, 30173803 - 30173755
Alignment:
Q  131 aaaaaataacataattcagtgtaattatatgtgtcggtgttgtgtccgt 179  Q
    ||||||| |||||| |||||||||||| | |||||||||| ||||||||    
T  30173803 aaaaaattacataactcagtgtaattacaagtgtcggtgtcgtgtccgt 30173755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 140 - 188
Target Start/End: Complemental strand, 40285686 - 40285638
Alignment:
Q  140 cataattcagtgtaattatatgtgtcggtgttgtgtccgtgcttcatag 188  Q
    |||||||||||||| | |||||||||| ||| ||||| |||||||||||    
T  40285686 cataattcagtgtagtcatatgtgtcgatgtcgtgtcggtgcttcatag 40285638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 86 - 170
Target Start/End: Complemental strand, 43492580 - 43492496
Alignment:
Q  86 ggacacggacaccagacactacacgccgacacaacta--aatttgttaaaaaataacataattcagtgtaattatatgtgtcggtgt 170  Q
    |||||| |||||| ||||| |||||||||||| ||||  ||||||  | ||||| || |||||| |||||||||| |||||||||||    
T  43492580 ggacacagacaccggacacgacacgccgacaccactagtaatttg--agaaaatcacgtaattcggtgtaattatgtgtgtcggtgt 43492496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 131 - 175
Target Start/End: Complemental strand, 48148078 - 48148034
Alignment:
Q  131 aaaaaataacataattcagtgtaattatatgtgtcggtgttgtgt 175  Q
    ||||||| | |||||||||||||||||||| ||||||||| ||||    
T  48148078 aaaaaatcatataattcagtgtaattatatatgtcggtgtcgtgt 48148034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 100 - 176
Target Start/End: Original strand, 18367823 - 18367899
Alignment:
Q  100 gacactacacgccgacacaactaaatttgttaaaaaataacataattcagtgtaattatatgtgtcggtgttgtgtc 176  Q
    ||||| ||||||||||||| |||| ||| ||| ||||| ||| ||| |||||||||||||||||||||||| |||||    
T  18367823 gacacgacacgccgacacagctaatttttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcgtgtc 18367899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 86 - 170
Target Start/End: Complemental strand, 5626781 - 5626698
Alignment:
Q  86 ggacacggacaccagacact-acacgccgacacaactaaatttgttaaaaaataacataattcagtgtaattatatgtgtcggtgt 170  Q
    ||||||||||||  |||||| |||||||||||||||||| ||| ||| ||||| || || |||||||||| |||||||||||||||    
T  5626781 ggacacggacac--gacactgacacgccgacacaactaatttttttagaaaatcacttagttcagtgtaaatatatgtgtcggtgt 5626698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 106 - 176
Target Start/End: Complemental strand, 16488656 - 16488586
Alignment:
Q  106 acacgccgacacaactaaatttgttaaaaaataacataattcagtgtaattatatgtgtcggtgttgtgtc 176  Q
    ||||||||||||| |||| ||| ||| ||||| ||| ||| |||||||||||||||||||||||| |||||    
T  16488656 acacgccgacacagctaatttttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcgtgtc 16488586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 133 - 178
Target Start/End: Complemental strand, 9025533 - 9025488
Alignment:
Q  133 aaaataacataattcagtgtaattatatgtgtcggtgttgtgtccg 178  Q
    ||||| |||||||||||||||||||||||||||||||| |||||||    
T  9025533 aaaatcacataattcagtgtaattatatgtgtcggtgtcgtgtccg 9025488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 131 - 170
Target Start/End: Original strand, 7027260 - 7027299
Alignment:
Q  131 aaaaaataacataattcagtgtaattatatgtgtcggtgt 170  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  7027260 aaaaaatcacataattcagtgtaattatatgtgtcggtgt 7027299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 106 - 176
Target Start/End: Complemental strand, 8931668 - 8931598
Alignment:
Q  106 acacgccgacacaactaaatttgttaaaaaataacataattcagtgtaattatatgtgtcggtgttgtgtc 176  Q
    ||||||||||||| |||||  | | | |||||||||||||||||| ||||||||||||||| ||| |||||    
T  8931668 acacgccgacacagctaaaaatttgagaaaataacataattcagtataattatatgtgtcgatgtcgtgtc 8931598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 133 - 170
Target Start/End: Complemental strand, 7265632 - 7265595
Alignment:
Q  133 aaaataacataattcagtgtaattatatgtgtcggtgt 170  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  7265632 aaaatcacataattcagtgtaattatatgtgtcggtgt 7265595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 131 - 176
Target Start/End: Original strand, 9522909 - 9522954
Alignment:
Q  131 aaaaaataacataattcagtgtaattatatgtgtcggtgttgtgtc 176  Q
    ||||||| ||||||||||||||||||| | ||||||||||||||||    
T  9522909 aaaaaatcacataattcagtgtaattacaagtgtcggtgttgtgtc 9522954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 170
Target Start/End: Original strand, 34595127 - 34595191
Alignment:
Q  106 acacgccgacacaactaaatttgttaaaaaataacataattcagtgtaattatatgtgtcggtgt 170  Q
    ||||||||||||||||||   | | ||||||| ||||||||||||||||||| | ||||||||||    
T  34595127 acacgccgacacaactaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgt 34595191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 133 - 176
Target Start/End: Original strand, 7086815 - 7086858
Alignment:
Q  133 aaaataacataattcagtgtaattatatgtgtcggtgttgtgtc 176  Q
    ||||| |||||||| ||||||||||||||||||||||| |||||    
T  7086815 aaaatcacataatttagtgtaattatatgtgtcggtgtagtgtc 7086858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 139 - 178
Target Start/End: Original strand, 9027204 - 9027243
Alignment:
Q  139 acataattcagtgtaattatatgtgtcggtgttgtgtccg 178  Q
    ||||||||| |||||||||||||||||||||| |||||||    
T  9027204 acataattccgtgtaattatatgtgtcggtgtcgtgtccg 9027243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 133 - 176
Target Start/End: Original strand, 26562709 - 26562752
Alignment:
Q  133 aaaataacataattcagtgtaattatatgtgtcggtgttgtgtc 176  Q
    ||||| |||||||||||||||||||||||||||| ||| |||||    
T  26562709 aaaatcacataattcagtgtaattatatgtgtcgatgtcgtgtc 26562752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 133 - 175
Target Start/End: Complemental strand, 9195793 - 9195751
Alignment:
Q  133 aaaataacataattcagtgtaattatatgtgtcggtgttgtgt 175  Q
    ||||| |||||||| ||||||||||||||||||||||| ||||    
T  9195793 aaaatgacataatttagtgtaattatatgtgtcggtgtcgtgt 9195751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 133 - 171
Target Start/End: Original strand, 9658899 - 9658937
Alignment:
Q  133 aaaataacataattcagtgtaattatatgtgtcggtgtt 171  Q
    ||||| |||||||||||||||||||||| ||||||||||    
T  9658899 aaaatcacataattcagtgtaattatatttgtcggtgtt 9658937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 106 - 176
Target Start/End: Complemental strand, 10770740 - 10770670
Alignment:
Q  106 acacgccgacacaactaaatttgttaaaaaataacataattcagtgtaattatatgtgtcggtgttgtgtc 176  Q
    ||||||| ||||||||||   | | ||||||| ||||||||||||||||||| | |||||||||| |||||    
T  10770740 acacgccaacacaactaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtc 10770670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 106 - 176
Target Start/End: Original strand, 16766690 - 16766760
Alignment:
Q  106 acacgccgacacaactaaatttgttaaaaaataacataattcagtgtaattatatgtgtcggtgttgtgtc 176  Q
    ||||||||||||| ||||   | | ||||||| ||||||||||||||||||| | |||||||||| |||||    
T  16766690 acacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtc 16766760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 171
Target Start/End: Original strand, 16833292 - 16833366
Alignment:
Q  98 cagacact-acacgccgacacaactaaatttgttaaaaaataacataattcagtgtaattatatgtgtcggtgtt 171  Q
    |||||||| ||||||||||||||||||   | | ||||||| ||||| ||||||||||||| | |||||||||||    
T  16833292 cagacactgacacgccgacacaactaataatttgaaaaaatcacatacttcagtgtaattacaagtgtcggtgtt 16833366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 170
Target Start/End: Original strand, 7377999 - 7378036
Alignment:
Q  133 aaaataacataattcagtgtaattatatgtgtcggtgt 170  Q
    ||||| |||||||||| |||||||||||||||||||||    
T  7377999 aaaatcacataattcaatgtaattatatgtgtcggtgt 7378036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 170
Target Start/End: Complemental strand, 7801243 - 7801158
Alignment:
Q  86 ggacacggacaccagacacta-cacgccgacacaactaaatttgttaaaaaataacataattcagtgtaattatatgtgtcggtgt 170  Q
    ||||||||| |||  |||||| |||||||||||||||||   | | ||||||| ||||||||||| ||||||| | ||||||||||    
T  7801243 ggacacggataccgaacactaacacgccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgt 7801158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 170
Target Start/End: Original strand, 9617454 - 9617491
Alignment:
Q  133 aaaataacataattcagtgtaattatatgtgtcggtgt 170  Q
    ||||| |||||||||| |||||||||||||||||||||    
T  9617454 aaaatcacataattcaatgtaattatatgtgtcggtgt 9617491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 170
Target Start/End: Original strand, 9629403 - 9629440
Alignment:
Q  133 aaaataacataattcagtgtaattatatgtgtcggtgt 170  Q
    ||||| |||||||||| |||||||||||||||||||||    
T  9629403 aaaatcacataattcaatgtaattatatgtgtcggtgt 9629440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 166
Target Start/End: Complemental strand, 11591909 - 11591876
Alignment:
Q  133 aaaataacataattcagtgtaattatatgtgtcg 166  Q
    ||||| ||||||||||||||||||||||||||||    
T  11591909 aaaatcacataattcagtgtaattatatgtgtcg 11591876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 170
Target Start/End: Complemental strand, 13360411 - 13360374
Alignment:
Q  133 aaaataacataattcagtgtaattatatgtgtcggtgt 170  Q
    ||||| |||||||||||||||||||||||| |||||||    
T  13360411 aaaatcacataattcagtgtaattatatgtttcggtgt 13360374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 166
Target Start/End: Original strand, 13851756 - 13851789
Alignment:
Q  133 aaaataacataattcagtgtaattatatgtgtcg 166  Q
    |||||||| |||||||||||||||||||||||||    
T  13851756 aaaataacgtaattcagtgtaattatatgtgtcg 13851789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 170
Target Start/End: Original strand, 19040372 - 19040409
Alignment:
Q  133 aaaataacataattcagtgtaattatatgtgtcggtgt 170  Q
    ||||| ||||||||||||||||||||||||||| ||||    
T  19040372 aaaatcacataattcagtgtaattatatgtgtctgtgt 19040409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 170
Target Start/End: Complemental strand, 21924966 - 21924937
Alignment:
Q  141 ataattcagtgtaattatatgtgtcggtgt 170  Q
    ||||||||||||||||||||||||||||||    
T  21924966 ataattcagtgtaattatatgtgtcggtgt 21924937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 131 - 175
Target Start/End: Original strand, 7973672 - 7973716
Alignment:
Q  131 aaaaaataacataattcagtgtaattatatgtgtcggtgttgtgt 175  Q
    ||||||| |||||||| |||||||||||| |||||||||| ||||    
T  7973672 aaaaaattacataattaagtgtaattataagtgtcggtgtcgtgt 7973716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 106 - 170
Target Start/End: Complemental strand, 7977896 - 7977832
Alignment:
Q  106 acacgccgacacaactaaatttgttaaaaaataacataattcagtgtaattatatgtgtcggtgt 170  Q
    ||||||||||||| ||||   | | ||||||| ||||||||||||||||||| | ||||||||||    
T  7977896 acacgccgacacagctaataatttgaaaaaattacataattcagtgtaattacaagtgtcggtgt 7977832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 108 - 176
Target Start/End: Complemental strand, 17327719 - 17327651
Alignment:
Q  108 acgccgacacaactaaatttgttaaaaaataacataattcagtgtaattatatgtgtcggtgttgtgtc 176  Q
    ||||||||||||||||  || | | ||||| |||||||| ||||||| |||||||||| |||| |||||    
T  17327719 acgccgacacaactaagattttgagaaaatcacataatttagtgtaactatatgtgtcagtgtcgtgtc 17327651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 140 - 176
Target Start/End: Complemental strand, 34073379 - 34073343
Alignment:
Q  140 cataattcagtgtaattatatgtgtcggtgttgtgtc 176  Q
    |||||||||||||||||||||| |||||||| |||||    
T  34073379 cataattcagtgtaattatatgggtcggtgtcgtgtc 34073343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 90 - 170
Target Start/End: Original strand, 34910294 - 34910374
Alignment:
Q  90 acggacaccagacactacacgccgacacaactaaatttgttaaaaaataacataattcagtgtaattatatgtgtcggtgt 170  Q
    ||||||||||||||| ||||||||||||||||||   | | ||||||| ||||||||||||||||||| | | ||||||||    
T  34910294 acggacaccagacacgacacgccgacacaactaataatttgaaaaaatcacataattcagtgtaattacaagagtcggtgt 34910374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 106 - 170
Target Start/End: Original strand, 35222931 - 35222995
Alignment:
Q  106 acacgccgacacaactaaatttgttaaaaaataacataattcagtgtaattatatgtgtcggtgt 170  Q
    ||||||||||||||||||  || ||| ||||| |||||||||| |||||||||||||||||||||    
T  35222931 acacgccgacacaactaacatttttagaaaatcacataattcaatgtaattatatgtgtcggtgt 35222995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 98 - 176
Target Start/End: Original strand, 14209098 - 14209176
Alignment:
Q  98 cagacactacacgccgacacaactaaatttgttaaaaaataacataattcagtgtaattatatgtgtcggtgttgtgtc 176  Q
    ||||||| ||||||||||||||||||   | ||||||||| ||||||||||||||||||| | ||||| |||| |||||    
T  14209098 cagacacgacacgccgacacaactaataattttaaaaaatcacataattcagtgtaattacaagtgtcagtgtcgtgtc 14209176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 89 - 170
Target Start/End: Original strand, 13414441 - 13414526
Alignment:
Q  89 cacggacaccagacactacacg----ccgacacaactaaatttgttaaaaaataacataattcagtgtaattatatgtgtcggtgt 170  Q
    |||||||||||||||| |||||    |||||||||| |||| | ||| ||||| | |||||||| |||||||||||||||||||||    
T  13414441 cacggacaccagacacgacacggacaccgacacaaccaaatgttttagaaaatcaaataattcaatgtaattatatgtgtcggtgt 13414526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 131 - 170
Target Start/End: Original strand, 7928468 - 7928507
Alignment:
Q  131 aaaaaataacataattcagtgtaattatatgtgtcggtgt 170  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  7928468 aaaaaatcacataattcagtgtaattatatgtgtcggtgt 7928507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 86 - 170
Target Start/End: Original strand, 14027976 - 14028064
Alignment:
Q  86 ggacacggacaccagacactacacg----ccgacacaactaaatttgttaaaaaataacataattcagtgtaattatatgtgtcggtgt 170  Q
    ||||||||||||| ||||| |||||    |||||||| |||| ||| ||| ||||| ||| ||| ||||||||||||||||||||||||    
T  14027976 ggacacggacaccggacacgacacggacaccgacacagctaatttttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgt 14028064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 131 - 170
Target Start/End: Complemental strand, 40993376 - 40993337
Alignment:
Q  131 aaaaaataacataattcagtgtaattatatgtgtcggtgt 170  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  40993376 aaaaaatcacataattcagtgtaattatatgtgtcggtgt 40993337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 131 - 173
Target Start/End: Complemental strand, 30184147 - 30184105
Alignment:
Q  131 aaaaaataacataattcagtgtaattatatgtgtcggtgttgt 173  Q
    ||||||| ||||||||||||||||||| |||||||||||||||    
T  30184147 aaaaaatgacataattcagtgtaattacatgtgtcggtgttgt 30184105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 98 - 170
Target Start/End: Complemental strand, 16000091 - 16000018
Alignment:
Q  98 cagacact-acacgccgacacaactaaatttgttaaaaaataacataattcagtgtaattatatgtgtcggtgt 170  Q
    |||||||| ||||||||||||||||||   | | |||||||||||||||||||||||| || | ||||||||||    
T  16000091 cagacactgacacgccgacacaactaataatttaaaaaaataacataattcagtgtaactacaagtgtcggtgt 16000018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 129 - 170
Target Start/End: Original strand, 38731234 - 38731275
Alignment:
Q  129 ttaaaaaataacataattcagtgtaattatatgtgtcggtgt 170  Q
    ||||||||| ||||||||||||||| ||||||||||||||||    
T  38731234 ttaaaaaatcacataattcagtgtagttatatgtgtcggtgt 38731275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 133 - 172
Target Start/End: Complemental strand, 3962832 - 3962793
Alignment:
Q  133 aaaataacataattcagtgtaattatatgtgtcggtgttg 172  Q
    |||||||||||| ||||||| |||||||||||||||||||    
T  3962832 aaaataacataactcagtgttattatatgtgtcggtgttg 3962793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 141 - 176
Target Start/End: Complemental strand, 8039866 - 8039831
Alignment:
Q  141 ataattcagtgtaattatatgtgtcggtgttgtgtc 176  Q
    |||||||||||||||||||||||||||||| |||||    
T  8039866 ataattcagtgtaattatatgtgtcggtgtcgtgtc 8039831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 111 - 170
Target Start/End: Complemental strand, 13845586 - 13845527
Alignment:
Q  111 ccgacacaactaaatttgttaaaaaataacataattcagtgtaattatatgtgtcggtgt 170  Q
    ||||||||  ||||||| ||| ||||| ||| ||| ||||||||||||||||||||||||    
T  13845586 ccgacacagttaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgt 13845527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 133 - 164
Target Start/End: Complemental strand, 16192789 - 16192758
Alignment:
Q  133 aaaataacataattcagtgtaattatatgtgt 164  Q
    ||||||||||||||||||||||||||||||||    
T  16192789 aaaataacataattcagtgtaattatatgtgt 16192758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 175
Target Start/End: Complemental strand, 17005650 - 17005616
Alignment:
Q  141 ataattcagtgtaattatatgtgtcggtgttgtgt 175  Q
    ||||||||||||||||||| |||||||||||||||    
T  17005650 ataattcagtgtaattataagtgtcggtgttgtgt 17005616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 106 - 172
Target Start/End: Original strand, 20503458 - 20503524
Alignment:
Q  106 acacgccgacacaactaaatttgttaaaaaataacataattcagtgtaattatatgtgtcggtgttg 172  Q
    ||||||||||||||| ||   | | ||||||| ||||||||||||||||||| | ||||||||||||    
T  20503458 acacgccgacacaacaaataatttgaaaaaatgacataattcagtgtaattacaagtgtcggtgttg 20503524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 170
Target Start/End: Complemental strand, 8789589 - 8789552
Alignment:
Q  133 aaaataacataattcagtgtaattatatgtgtcggtgt 170  Q
    ||||| ||||||||| ||||||||||||||||||||||    
T  8789589 aaaatcacataattccgtgtaattatatgtgtcggtgt 8789552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 170
Target Start/End: Original strand, 20691339 - 20691376
Alignment:
Q  133 aaaataacataattcagtgtaattatatgtgtcggtgt 170  Q
    ||||| ||||||||||||||||| ||||||||||||||    
T  20691339 aaaatgacataattcagtgtaatcatatgtgtcggtgt 20691376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 170
Target Start/End: Original strand, 25093522 - 25093559
Alignment:
Q  133 aaaataacataattcagtgtaattatatgtgtcggtgt 170  Q
    ||||| ||| ||||||||||||||||||||||||||||    
T  25093522 aaaatcacacaattcagtgtaattatatgtgtcggtgt 25093559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 176
Target Start/End: Complemental strand, 25948928 - 25948883
Alignment:
Q  131 aaaaaataacataattcagtgtaattatatgtgtcggtgttgtgtc 176  Q
    ||||||| ||||||||||||||||||||| |||| ||||| |||||    
T  25948928 aaaaaatcacataattcagtgtaattataagtgttggtgtcgtgtc 25948883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 29508462 - 29508503
Alignment:
Q  131 aaaaaataacataattcagtgtaattatatgtgtcggtgttg 172  Q
    ||||||| | |||||||||||||||||||||||||| |||||    
T  29508462 aaaaaatcatataattcagtgtaattatatgtgtcgatgttg 29508503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 133 - 173
Target Start/End: Complemental strand, 10690301 - 10690261
Alignment:
Q  133 aaaataacataattcagtgtaattatatgtgtcggtgttgt 173  Q
    ||||| |||||||||||||||||||||| ||||||| ||||    
T  10690301 aaaatcacataattcagtgtaattatatttgtcggtattgt 10690261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 106 - 170
Target Start/End: Original strand, 10954945 - 10955009
Alignment:
Q  106 acacgccgacacaactaaatttgttaaaaaataacataattcagtgtaattatatgtgtcggtgt 170  Q
    ||||||||||||||||||   | | ||||||| ||||||||||||||||| | | ||||||||||    
T  10954945 acacgccgacacaactaataatttgaaaaaatcacataattcagtgtaatcacaagtgtcggtgt 10955009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 131 - 175
Target Start/End: Complemental strand, 15314917 - 15314873
Alignment:
Q  131 aaaaaataacataattcagtgtaattatatgtgtcggtgttgtgt 175  Q
    ||||||| |||||||| ||||||||||||||||| ||||| ||||    
T  15314917 aaaaaatcacataatttagtgtaattatatgtgttggtgtcgtgt 15314873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 106 - 170
Target Start/End: Original strand, 18426942 - 18427006
Alignment:
Q  106 acacgccgacacaactaaatttgttaaaaaataacataattcagtgtaattatatgtgtcggtgt 170  Q
    |||||||||||| |||||   | | ||||||| ||||||||| |||||||||||| |||||||||    
T  18426942 acacgccgacaccactaataatttcaaaaaatcacataattcggtgtaattatatatgtcggtgt 18427006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 132 - 172
Target Start/End: Complemental strand, 24633441 - 24633401
Alignment:
Q  132 aaaaataacataattcagtgtaattatatgtgtcggtgttg 172  Q
    |||||| || ||||||| |||||||||||||||||||||||    
T  24633441 aaaaatcacgtaattcaatgtaattatatgtgtcggtgttg 24633401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 111 - 158
Target Start/End: Original strand, 1656674 - 1656721
Alignment:
Q  111 ccgacacaactaaatttgttaaaaaataacataattcagtgtaattat 158  Q
    ||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  1656674 ccgacacaactaaattttttaaaaaatcacataattcagtgtaattat 1656721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 133 - 170
Target Start/End: Original strand, 5835267 - 5835304
Alignment:
Q  133 aaaataacataattcagtgtaattatatgtgtcggtgt 170  Q
    ||||||||||||||||||||||||||||||||||||||    
T  5835267 aaaataacataattcagtgtaattatatgtgtcggtgt 5835304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 133 - 176
Target Start/End: Complemental strand, 7328730 - 7328687
Alignment:
Q  133 aaaataacataattcagtgtaattatatgtgtcggtgttgtgtc 176  Q
    |||||||||||||| ||||||||||||||||||||||| |||||    
T  7328730 aaaataacataatttagtgtaattatatgtgtcggtgtcgtgtc 7328687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 133 - 176
Target Start/End: Original strand, 15902842 - 15902885
Alignment:
Q  133 aaaataacataattcagtgtaattatatgtgtcggtgttgtgtc 176  Q
    ||||| |||||||| |||||||||||||||||||||||||||||    
T  15902842 aaaatcacataatttagtgtaattatatgtgtcggtgttgtgtc 15902885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 133 - 176
Target Start/End: Original strand, 17307913 - 17307956
Alignment:
Q  133 aaaataacataattcagtgtaattatatgtgtcggtgttgtgtc 176  Q
    |||||||||||||||||||||||||||||||| ||||| |||||    
T  17307913 aaaataacataattcagtgtaattatatgtgttggtgtcgtgtc 17307956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 108 - 170
Target Start/End: Complemental strand, 18213098 - 18213035
Alignment:
Q  108 acgccgacacaactaaatttgttaa-aaaataacataattcagtgtaattatatgtgtcggtgt 170  Q
    |||||||||||||||| ||| || | ||||| |||||||| |||||||||||||||||||||||    
T  18213098 acgccgacacaactaattttttttagaaaatcacataatttagtgtaattatatgtgtcggtgt 18213035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 133 - 176
Target Start/End: Complemental strand, 22602749 - 22602706
Alignment:
Q  133 aaaataacataattcagtgtaattatatgtgtcggtgttgtgtc 176  Q
    ||||| |||||||||||||||||||||||||||||||| |||||    
T  22602749 aaaatcacataattcagtgtaattatatgtgtcggtgtcgtgtc 22602706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 120 - 170
Target Start/End: Original strand, 39138451 - 39138501
Alignment:
Q  120 ctaaatttgttaaaaaataacataattcagtgtaattatatgtgtcggtgt 170  Q
    |||||||| ||| ||||| |||||||||||||||||||||| |||||||||    
T  39138451 ctaaattttttagaaaatcacataattcagtgtaattatatatgtcggtgt 39138501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 129 - 170
Target Start/End: Original strand, 640129 - 640170
Alignment:
Q  129 ttaaaaaataacataattcagtgtaattatatgtgtcggtgt 170  Q
    |||| |||| ||||||||||||||||||||||||||||||||    
T  640129 ttaacaaatcacataattcagtgtaattatatgtgtcggtgt 640170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 131 - 176
Target Start/End: Complemental strand, 18013115 - 18013070
Alignment:
Q  131 aaaaaataacataattcagtgtaattatatgtgtcggtgttgtgtc 176  Q
    ||||||| ||||||||||||||||||||||||||| |||| |||||    
T  18013115 aaaaaattacataattcagtgtaattatatgtgtcagtgtcgtgtc 18013070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 131 - 188
Target Start/End: Original strand, 18039017 - 18039074
Alignment:
Q  131 aaaaaataacataattcagtgtaattatatgtgtcggtgttgtgtccgtgcttcatag 188  Q
    ||||||| ||||||||||||||||||| | |||||||||| ||||| ||| |||||||    
T  18039017 aaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtttcatag 18039074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 170
Target Start/End: Complemental strand, 9408420 - 9408336
Alignment:
Q  87 gacacggacaccagacact-acacgccgacacaactaaatttgttaaaaaataacataattcagtgtaattatatgtgtcggtgt 170  Q
    ||||||||||||||||||| |||| ||||||||| |||   | | ||||||| |||||||| |||||||||| | ||||||||||    
T  9408420 gacacggacaccagacactgacacaccgacacaattaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgt 9408336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 133 - 168
Target Start/End: Complemental strand, 27732278 - 27732243
Alignment:
Q  133 aaaataacataattcagtgtaattatatgtgtcggt 168  Q
    ||||| ||||||||||||||||||||||||||||||    
T  27732278 aaaattacataattcagtgtaattatatgtgtcggt 27732243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 133 - 171
Target Start/End: Original strand, 17851451 - 17851489
Alignment:
Q  133 aaaataacataattcagtgtaattatatgtgtcggtgtt 171  Q
    ||||| ||||||||||||||||||||||||||| |||||    
T  17851451 aaaatcacataattcagtgtaattatatgtgtctgtgtt 17851489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 175
Target Start/End: Complemental strand, 23128692 - 23128658
Alignment:
Q  141 ataattcagtgtaattatatgtgtcggtgttgtgt 175  Q
    ||||||||||||||| |||||||||||||||||||    
T  23128692 ataattcagtgtaatcatatgtgtcggtgttgtgt 23128658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 106 - 176
Target Start/End: Original strand, 24339635 - 24339705
Alignment:
Q  106 acacgccgacacaactaaatttgttaaaaaataacataattcagtgtaattatatgtgtcggtgttgtgtc 176  Q
    ||||||||||||| ||||   | | ||||||| ||||||||||||||||||| | |||||||||| |||||    
T  24339635 acacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtc 24339705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 178
Target Start/End: Original strand, 5233649 - 5233694
Alignment:
Q  133 aaaataacataattcagtgtaattatatgtgtcggtgttgtgtccg 178  Q
    ||||| |||||||  ||||||||||||||||| |||||||||||||    
T  5233649 aaaatcacataatctagtgtaattatatgtgttggtgttgtgtccg 5233694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 170
Target Start/End: Original strand, 9482954 - 9482991
Alignment:
Q  133 aaaataacataattcagtgtaattatatgtgtcggtgt 170  Q
    ||||| ||| ||||||||||||||||||||||||||||    
T  9482954 aaaatcacacaattcagtgtaattatatgtgtcggtgt 9482991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 166
Target Start/End: Original strand, 12278855 - 12278888
Alignment:
Q  133 aaaataacataattcagtgtaattatatgtgtcg 166  Q
    ||||| ||||||||||||||||||||||||||||    
T  12278855 aaaatgacataattcagtgtaattatatgtgtcg 12278888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 170
Target Start/End: Original strand, 20549811 - 20549848
Alignment:
Q  133 aaaataacataattcagtgtaattatatgtgtcggtgt 170  Q
    ||||| || |||||||||||||||||||||||||||||    
T  20549811 aaaatcacgtaattcagtgtaattatatgtgtcggtgt 20549848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 141 - 181
Target Start/End: Complemental strand, 3142109 - 3142069
Alignment:
Q  141 ataattcagtgtaattatatgtgtcggtgttgtgtccgtgc 181  Q
    |||||||| |||||| |||||||||||||||||||| ||||    
T  3142109 ataattcaatgtaatcatatgtgtcggtgttgtgtcggtgc 3142069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 130 - 170
Target Start/End: Complemental strand, 9949112 - 9949073
Alignment:
Q  130 taaaaaataacataattcagtgtaattatatgtgtcggtgt 170  Q
    |||||||||| | ||||||||||||||||||||||||||||    
T  9949112 taaaaaataaaa-aattcagtgtaattatatgtgtcggtgt 9949073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 133 - 165
Target Start/End: Original strand, 22868062 - 22868094
Alignment:
Q  133 aaaataacataattcagtgtaattatatgtgtc 165  Q
    ||||| |||||||||||||||||||||||||||    
T  22868062 aaaatcacataattcagtgtaattatatgtgtc 22868094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 139 - 178
Target Start/End: Complemental strand, 23849491 - 23849451
Alignment:
Q  139 acataattcagtgtaattatatgtgtcggtgt-tgtgtccg 178  Q
    |||||||||||| ||||||||||||||||||| ||||||||    
T  23849491 acataattcagtataattatatgtgtcggtgtatgtgtccg 23849451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 132 - 172
Target Start/End: Original strand, 41020515 - 41020555
Alignment:
Q  132 aaaaataacataattcagtgtaattatatgtgtcggtgttg 172  Q
    |||||| |||||||| |||||||||||||| ||||||||||    
T  41020515 aaaaatcacataatttagtgtaattatatgcgtcggtgttg 41020555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 37; Significance: 0.000000000008; HSPs: 14)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 133 - 181
Target Start/End: Original strand, 46160916 - 46160964
Alignment:
Q  133 aaaataacataattcagtgtaattatatgtgtcggtgttgtgtccgtgc 181  Q
    |||||||||||||||||||| ||||||||||||||||| ||||| ||||    
T  46160916 aaaataacataattcagtgttattatatgtgtcggtgtcgtgtcggtgc 46160964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 106 - 176
Target Start/End: Complemental strand, 5414238 - 5414168
Alignment:
Q  106 acacgccgacacaactaaatttgttaaaaaataacataattcagtgtaattatatgtgtcggtgttgtgtc 176  Q
    ||||||||||||| |||| ||| ||| ||||| ||| ||| |||||||||||||||| ||||||| |||||    
T  5414238 acacgccgacacagctaatttttttagaaaatcacaaaatgcagtgtaattatatgtatcggtgtcgtgtc 5414168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 131 - 176
Target Start/End: Complemental strand, 22234931 - 22234886
Alignment:
Q  131 aaaaaataacataattcagtgtaattatatgtgtcggtgttgtgtc 176  Q
    ||||||| |||||||||||||||||| ||||||||||||| |||||    
T  22234931 aaaaaatcacataattcagtgtaattctatgtgtcggtgtcgtgtc 22234886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 62 - 159
Target Start/End: Complemental strand, 32273636 - 32273539
Alignment:
Q  62 actatgaagcacgagtactcacatggacacggacaccagacactacacgccgacacaactaaatttgttaaaaaataacataattcagtgtaattata 159  Q
    |||||||||||||| |||  | |||||||| |||||| ||||  ||||||| ||||||||||   | | |||||||||||||||||||  ||||||||    
T  32273636 actatgaagcacgaatacggatatggacacagacaccggacatgacacgccaacacaactaataatttgaaaaaataacataattcagaataattata 32273539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 131 - 170
Target Start/End: Complemental strand, 40179677 - 40179638
Alignment:
Q  131 aaaaaataacataattcagtgtaattatatgtgtcggtgt 170  Q
    ||||||| ||||||||||||||||||||||| ||||||||    
T  40179677 aaaaaatcacataattcagtgtaattatatgcgtcggtgt 40179638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 131 - 170
Target Start/End: Complemental strand, 54580064 - 54580025
Alignment:
Q  131 aaaaaataacataattcagtgtaattatatgtgtcggtgt 170  Q
    ||||||| ||||||||||||||||||||| ||||||||||    
T  54580064 aaaaaatcacataattcagtgtaattataagtgtcggtgt 54580025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 129 - 171
Target Start/End: Complemental strand, 1213264 - 1213222
Alignment:
Q  129 ttaaaaaataacataattcagtgtaattatatgtgtcggtgtt 171  Q
    ||||||||| | |||||||||||||||||||||||||| ||||    
T  1213264 ttaaaaaattatataattcagtgtaattatatgtgtcgatgtt 1213222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 133 - 167
Target Start/End: Original strand, 40613470 - 40613504
Alignment:
Q  133 aaaataacataattcagtgtaattatatgtgtcgg 167  Q
    ||||| |||||||||||||||||||||||||||||    
T  40613470 aaaatcacataattcagtgtaattatatgtgtcgg 40613504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 170
Target Start/End: Complemental strand, 5555175 - 5555134
Alignment:
Q  129 ttaaaaaataacataattcagtgtaattatatgtgtcggtgt 170  Q
    ||||||||||| |||||| | |||||||||||||||||||||    
T  5555175 ttaaaaaataagataatttaatgtaattatatgtgtcggtgt 5555134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 170
Target Start/End: Complemental strand, 5775397 - 5775360
Alignment:
Q  133 aaaataacataattcagtgtaattatatgtgtcggtgt 170  Q
    ||||| |||||||| |||||||||||||||||||||||    
T  5775397 aaaatcacataattaagtgtaattatatgtgtcggtgt 5775360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 123
Target Start/End: Original strand, 24543950 - 24543991
Alignment:
Q  83 catggacacggacaccagacact-acacgccgacacaactaa 123  Q
    |||||| |||||||||||||||| ||||||||||||||||||    
T  24543950 catggatacggacaccagacactgacacgccgacacaactaa 24543991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 29205462 - 29205503
Alignment:
Q  131 aaaaaataacataattcagtgtaattatatgtgtcggtgttg 172  Q
    ||||||| ||||||||||||||||||| | ||||||||||||    
T  29205462 aaaaaatcacataattcagtgtaattacaagtgtcggtgttg 29205503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 176
Target Start/End: Original strand, 12708130 - 12708210
Alignment:
Q  98 cagacact-acacgccgacacaactaa-atttgttaaaaaataacataattcagtgtaattatatgtgtcggtgttgtgtc 176  Q
    |||||||| |||||| ||||||||||| | || ||||||||| | ||||||||||||||||| | |||||| ||| |||||    
T  12708130 cagacactgacacgcagacacaactaataatttttaaaaaatgaaataattcagtgtaattacaagtgtcgatgtcgtgtc 12708210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 133 - 169
Target Start/End: Original strand, 16189729 - 16189765
Alignment:
Q  133 aaaataacataattcagtgtaattatatgtgtcggtg 169  Q
    ||||| |||||||||||||||||||| ||||||||||    
T  16189729 aaaatcacataattcagtgtaattatgtgtgtcggtg 16189765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 131 - 170
Target Start/End: Original strand, 70296 - 70335
Alignment:
Q  131 aaaaaataacataattcagtgtaattatatgtgtcggtgt 170  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  70296 aaaaaataacataattcagtgtaattataagtgtcggtgt 70335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 131 - 176
Target Start/End: Original strand, 23438 - 23483
Alignment:
Q  131 aaaaaataacataattcagtgtaattatatgtgtcggtgttgtgtc 176  Q
    ||||||| ||||||||||||||||||||| |||||||||| |||||    
T  23438 aaaaaatcacataattcagtgtaattataagtgtcggtgtcgtgtc 23483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 133 - 178
Target Start/End: Complemental strand, 135351 - 135306
Alignment:
Q  133 aaaataacataattcagtgtaattatatgtgtcggtgttgtgtccg 178  Q
    ||||| ||||||||| |||||||||||||||||||||| |||||||    
T  135351 aaaatcacataattctgtgtaattatatgtgtcggtgtcgtgtccg 135306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0623 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 170
Target Start/End: Complemental strand, 6062 - 5998
Alignment:
Q  106 acacgccgacacaactaaatttgttaaaaaataacataattcagtgtaattatatgtgtcggtgt 170  Q
    ||||||||| ||| |||| ||| ||| ||||| ||| ||| ||||||||||||||||||||||||    
T  6062 acacgccgatacatctaatttttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgt 5998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 170
Target Start/End: Original strand, 9891 - 9955
Alignment:
Q  106 acacgccgacacaactaaatttgttaaaaaataacataattcagtgtaattatatgtgtcggtgt 170  Q
    ||||||||||||| |||| ||| ||| ||||| | | ||| ||||||||||||||||||||||||    
T  9891 acacgccgacacagctaatttttttagaaaatcataaaatgcagtgtaattatatgtgtcggtgt 9955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 140 - 176
Target Start/End: Original strand, 28877 - 28913
Alignment:
Q  140 cataattcagtgtaattatatgtgtcggtgttgtgtc 176  Q
    ||||||||| |||||||||||||||||||||||||||    
T  28877 cataattcaatgtaattatatgtgtcggtgttgtgtc 28913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 133 - 168
Target Start/End: Complemental strand, 44564 - 44529
Alignment:
Q  133 aaaataacataattcagtgtaattatatgtgtcggt 168  Q
    ||||| ||||||||||||||||||||||||||||||    
T  44564 aaaatcacataattcagtgtaattatatgtgtcggt 44529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 133 - 176
Target Start/End: Original strand, 99913 - 99956
Alignment:
Q  133 aaaataacataattcagtgtaattatatgtgtcggtgttgtgtc 176  Q
    |||||||||||||||| ||||||||||||||| ||||| |||||    
T  99913 aaaataacataattcaatgtaattatatgtgttggtgtcgtgtc 99956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 133 - 175
Target Start/End: Complemental strand, 9786 - 9744
Alignment:
Q  133 aaaataacataattcagtgtaattatatgtgtcggtgttgtgt 175  Q
    ||||| || ||||||||||||||||||||||||||||| ||||    
T  9786 aaaatcacttaattcagtgtaattatatgtgtcggtgtcgtgt 9744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1528 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1528
Description:

Target: scaffold1528; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 176
Target Start/End: Original strand, 1053 - 1098
Alignment:
Q  131 aaaaaataacataattcagtgtaattatatgtgtcggtgttgtgtc 176  Q
    ||||||| |||||||||||||||| |||||||||| |||| |||||    
T  1053 aaaaaattacataattcagtgtaactatatgtgtcagtgtggtgtc 1098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 165
Target Start/End: Original strand, 101011 - 101052
Alignment:
Q  124 atttgttaaaaaataacataattcagtgtaattatatgtgtc 165  Q
    |||| ||||||||| |||||||||| ||||||||||||||||    
T  101011 attttttaaaaaatgacataattcaatgtaattatatgtgtc 101052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 133 - 169
Target Start/End: Original strand, 53200 - 53236
Alignment:
Q  133 aaaataacataattcagtgtaattatatgtgtcggtg 169  Q
    ||||| ||||||||||||||||||||| |||||||||    
T  53200 aaaatcacataattcagtgtaattataagtgtcggtg 53236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 131 - 175
Target Start/End: Original strand, 23788 - 23832
Alignment:
Q  131 aaaaaataacataattcagtgtaattatatgtgtcggtgttgtgt 175  Q
    ||||||| ||||||||||||||||||| | |||||||||| ||||    
T  23788 aaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgt 23832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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