View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11247_high_16 (Length: 336)
Name: NF11247_high_16
Description: NF11247
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11247_high_16 |
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Alignment Details
Target: chr7 (Bit Score: 262; Significance: 1e-146; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 9 - 320
Target Start/End: Complemental strand, 2409795 - 2409489
Alignment:
| Q |
9 |
ttacttataagtagggacagatggattaaaacttaacaagaaaaacgtttattttccactttaggtaagtgtacatattatcgccaacatgtacatttga |
108 |
Q |
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| T |
2409795 |
ttacttataattagggacagatggattaaaacttaacaagaaaaacgtttattttccactttaggtaagtgtacatattatcgccaacatgtacatttga |
2409696 |
T |
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| Q |
109 |
aatgtctaaccatttctataaacttttaacgtccacatgaaatcctttgccatatgtgggcacaaacttcattcgatatagttatcttcacccgnnnnnn |
208 |
Q |
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| T |
2409695 |
aatgtctaaccatttctataaacttttaacgtccacatgaaatcctttgcc--atgtgggcacaaacttcattcgatatagttatcttcacccg---ttt |
2409601 |
T |
|
| Q |
209 |
nnnncattgtcaacagtgttagattcatttgtcttttatcaacgacaacaagcatttgtcttttttcttactattgccaagttgtccgtgaatttaaatt |
308 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2409600 |
ttttcattgtcaacagtgttagattcatttgtcttttatcaacgacaacaagcatttgtcttttttcttactattgccaagttgtccgtgaatttaaatt |
2409501 |
T |
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| Q |
309 |
taaactaacatg |
320 |
Q |
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|||||||||||| |
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| T |
2409500 |
taaactaacatg |
2409489 |
T |
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