View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11247_high_22 (Length: 259)
Name: NF11247_high_22
Description: NF11247
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11247_high_22 |
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Alignment Details
Target: chr5 (Bit Score: 225; Significance: 1e-124; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 1 - 249
Target Start/End: Complemental strand, 24700461 - 24700214
Alignment:
| Q |
1 |
atttgataaaggtattacttcttggaacaattcatgaattaaatacaccgtgaaatcagttttgatttggcaattagagtaacatacggatggcatattt |
100 |
Q |
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| T |
24700461 |
atttgataaaggtattatttcttggaacaattcatgaattaaatacaccgtgaaatcagttttgatttggcaattagagtaacaaacggatggcatactt |
24700362 |
T |
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| Q |
101 |
tgttttgatttcagtttaaatagccacgaatatagtgaacacttttgaatatgattcaaattttatctcctgtaagcatgagttgttcacggttctgtat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
24700361 |
tgttttgatttcagtttaaatagccacgaatatagtgaacacttttgaatatgattcaaattttatctcctgtaagcatgagttgttcacggttctgtat |
24700262 |
T |
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| Q |
201 |
aacataagatgtatacatgatttatttgtcccgatctgttttggttcat |
249 |
Q |
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| T |
24700261 |
-acataagatgtatacatgatttatttgtctcgatctgttttggttcat |
24700214 |
T |
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