View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11248_high_11 (Length: 250)
Name: NF11248_high_11
Description: NF11248
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11248_high_11 |
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Alignment Details
Target: chr2 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 10971355 - 10971584
Alignment:
| Q |
1 |
gtcattcgacgtggtgtggctgtcgtcgtcggcggcggagaaaacggcggcggtgtggcgcggagatttgccgggaaaaacgaaaggggaaaattgaaga |
100 |
Q |
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| T |
10971355 |
gtcattcgacgtgatgtggctgtcgtcgtcatcggcggagaaaacggcggcggtgtggcgcggagatttgccgggaaaaacgaaagggggaaattgaaga |
10971454 |
T |
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| Q |
101 |
gaaacggttacgtttggaaagaagcgcgtgttattgttaaagttgaatgtgcgttgaatacgaatgcgttggatagttgaacatgaagttgctagtgact |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10971455 |
gaaacggttacgtttggaaagaagcgcgtgttattgttaaagttgaatgtgcgttgaatacgaatgcgttggatagttgaacatgaagttgctagtgact |
10971554 |
T |
|
| Q |
201 |
gtgttattgttgccattggtaactaactca |
230 |
Q |
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| T |
10971555 |
gggttattgttgccattggtaactaactca |
10971584 |
T |
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