View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11248_high_7 (Length: 296)
Name: NF11248_high_7
Description: NF11248
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11248_high_7 |
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Alignment Details
Target: chr1 (Bit Score: 265; Significance: 1e-148; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 19 - 287
Target Start/End: Complemental strand, 44992563 - 44992295
Alignment:
| Q |
19 |
gaacatggtatgaacttttcaaactagaggcatccgaatcatcgtcacatttgtttagaccccactttgacattttcacaatgtcaatgaaaaaggaaaa |
118 |
Q |
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| T |
44992563 |
gaacatggtatgaacttttcaaactagaggcatccgaatcatcgtcacatttgtttagaccccactttgacattttcacaatgtcaatgaaaaaggcaaa |
44992464 |
T |
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| Q |
119 |
tgaatttggcatttttaaaggaccaaagaaaacctctcaagttcctccaatccacgacagcctccaacctccacatgattccactttgcacattttcttt |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44992463 |
tgaatttggcatttttaaaggaccaaagaaaacctctcaagttcctccaatccacgacagcctccaacctccacatgattccactttgcacattttcttt |
44992364 |
T |
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| Q |
219 |
ctactataaaaatcattatttacccaactcatgcactcaaccatccttcttgcttcatcctcttcattt |
287 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44992363 |
ctactataaaaatcattatttacccaactcatgcactcaaccatccttcttgcttcatcctcttcattt |
44992295 |
T |
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