View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1124_low_1 (Length: 847)

Name: NF1124_low_1
Description: NF1124
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1124_low_1
NF1124_low_1
[»] chr1 (39 HSPs)
chr1 (211-662)||(29462487-29462937)
chr1 (660-839)||(50970647-50970826)
chr1 (661-839)||(5962947-5963125)
chr1 (666-839)||(21856412-21856585)
chr1 (666-839)||(17433219-17433392)
chr1 (661-832)||(15646571-15646742)
chr1 (99-214)||(29461872-29461987)
chr1 (666-832)||(29306956-29307122)
chr1 (661-839)||(29869618-29869796)
chr1 (659-832)||(5540194-5540367)
chr1 (662-839)||(15173095-15173272)
chr1 (666-839)||(18984122-18984295)
chr1 (666-839)||(33144288-33144461)
chr1 (666-839)||(9018976-9019149)
chr1 (666-839)||(39154022-39154195)
chr1 (666-839)||(8678911-8679083)
chr1 (666-837)||(26859431-26859601)
chr1 (666-832)||(29307317-29307484)
chr1 (666-825)||(17433597-17433757)
chr1 (723-837)||(4636033-4636146)
chr1 (666-780)||(8678544-8678658)
chr1 (666-822)||(4636356-4636513)
chr1 (661-789)||(39154439-39154567)
chr1 (666-789)||(29870038-29870161)
chr1 (666-823)||(21856045-21856203)
chr1 (666-780)||(26859062-26859176)
chr1 (661-789)||(18984538-18984666)
chr1 (666-821)||(50970281-50970437)
chr1 (666-789)||(5539819-5539942)
chr1 (666-832)||(9019338-9019505)
chr1 (666-823)||(15173478-15173635)
chr1 (666-780)||(15646195-15646309)
chr1 (671-823)||(33143925-33144078)
chr1 (661-803)||(52268288-52268430)
chr1 (666-789)||(5962581-5962704)
chr1 (666-749)||(2733416-2733499)
chr1 (666-738)||(47826967-47827039)
chr1 (799-833)||(17088516-17088550)
chr1 (299-357)||(29454488-29454546)
[»] chr3 (56 HSPs)
chr3 (663-839)||(41046700-41046876)
chr3 (657-839)||(5136974-5137156)
chr3 (659-839)||(37726925-37727105)
chr3 (666-839)||(24300925-24301098)
chr3 (666-839)||(39555946-39556119)
chr3 (666-837)||(20840563-20840734)
chr3 (666-839)||(31779021-31779194)
chr3 (666-832)||(43973444-43973610)
chr3 (666-839)||(25853596-25853769)
chr3 (659-839)||(23644458-23644638)
chr3 (666-839)||(26837725-26837897)
chr3 (666-839)||(30104485-30104657)
chr3 (661-839)||(27393946-27394124)
chr3 (669-818)||(48452995-48453144)
chr3 (667-839)||(22425182-22425354)
chr3 (666-837)||(32535330-32535505)
chr3 (662-839)||(26274936-26275112)
chr3 (666-823)||(17464494-17464652)
chr3 (659-823)||(20840945-20841110)
chr3 (661-839)||(17464860-17465039)
chr3 (661-823)||(27393659-27393822)
chr3 (659-789)||(32534955-32535085)
chr3 (660-823)||(39555575-39555739)
chr3 (666-823)||(4275748-4275906)
chr3 (666-823)||(37727314-37727472)
chr3 (666-823)||(43973824-43973982)
chr3 (663-803)||(25612382-25612522)
chr3 (666-823)||(22424817-22424975)
chr3 (666-823)||(25853237-25853395)
chr3 (661-789)||(30098182-30098310)
chr3 (660-823)||(31778650-31778814)
chr3 (662-823)||(26837359-26837521)
chr3 (666-784)||(29801359-29801477)
chr3 (666-802)||(23228414-23228549)
chr3 (666-825)||(29801798-29801958)
chr3 (666-789)||(51474753-51474876)
chr3 (659-823)||(24300553-24300717)
chr3 (658-789)||(26274562-26274693)
chr3 (666-823)||(5137365-5137523)
chr3 (666-803)||(50116814-50116951)
chr3 (666-789)||(23644884-23645007)
chr3 (666-804)||(32697105-32697242)
chr3 (666-791)||(25420558-25420683)
chr3 (666-803)||(37220560-37220697)
chr3 (666-789)||(45965941-45966064)
chr3 (660-823)||(41047083-41047245)
chr3 (666-777)||(51473431-51473542)
chr3 (666-749)||(37222030-37222113)
chr3 (664-790)||(32695704-32695830)
chr3 (794-840)||(49407926-49407972)
chr3 (794-839)||(55192248-55192293)
chr3 (721-791)||(18010162-18010232)
chr3 (794-839)||(37075819-37075864)
chr3 (779-839)||(29801532-29801592)
chr3 (756-803)||(23227349-23227396)
chr3 (794-839)||(27200062-27200107)
[»] chr7 (29 HSPs)
chr7 (660-839)||(37786764-37786943)
chr7 (662-839)||(19830419-19830596)
chr7 (666-839)||(19590528-19590701)
chr7 (666-837)||(34534162-34534333)
chr7 (659-839)||(29100220-29100400)
chr7 (666-837)||(2659211-2659382)
chr7 (666-837)||(32004985-32005156)
chr7 (661-839)||(4641438-4641616)
chr7 (660-839)||(38858640-38858819)
chr7 (666-837)||(35289272-35289443)
chr7 (669-832)||(23953105-23953268)
chr7 (662-832)||(4478076-4478246)
chr7 (666-823)||(19590909-19591067)
chr7 (666-822)||(32004617-32004774)
chr7 (676-823)||(29099863-29100011)
chr7 (666-823)||(38859025-38859183)
chr7 (666-780)||(23952733-23952848)
chr7 (666-823)||(2658842-2659000)
chr7 (666-823)||(34533794-34533952)
chr7 (666-803)||(28584327-28584464)
chr7 (666-803)||(38160954-38161091)
chr7 (660-823)||(19830804-19830967)
chr7 (666-821)||(37787153-37787309)
chr7 (666-801)||(28583442-28583577)
chr7 (666-779)||(35288906-35289019)
chr7 (666-823)||(4641828-4641983)
chr7 (797-832)||(32427397-32427432)
chr7 (797-839)||(35579256-35579298)
chr7 (794-839)||(35579029-35579074)
[»] chr8 (30 HSPs)
chr8 (661-839)||(33328156-33328334)
chr8 (666-839)||(31133223-31133396)
chr8 (666-839)||(19176659-19176832)
chr8 (660-839)||(9930026-9930205)
chr8 (666-839)||(12571866-12572040)
chr8 (666-836)||(41681137-41681306)
chr8 (666-839)||(9178005-9178177)
chr8 (666-837)||(11656458-11656630)
chr8 (667-839)||(13224645-13224816)
chr8 (666-839)||(44831614-44831787)
chr8 (716-837)||(33743290-33743411)
chr8 (660-823)||(13225023-13225187)
chr8 (664-839)||(4630161-4630330)
chr8 (666-789)||(31133639-31133762)
chr8 (666-789)||(34540967-34541090)
chr8 (666-780)||(9928912-9929026)
chr8 (663-789)||(12572270-12572396)
chr8 (666-823)||(19176293-19176451)
chr8 (666-823)||(33328524-33328682)
chr8 (666-780)||(41681562-41681676)
chr8 (661-823)||(44831245-44831408)
chr8 (666-823)||(33742925-33743082)
chr8 (660-789)||(11656876-11657005)
chr8 (666-789)||(4629800-4629923)
chr8 (662-801)||(10918125-10918264)
chr8 (661-803)||(8073957-8074098)
chr8 (666-771)||(11336959-11337064)
chr8 (742-803)||(43958264-43958325)
chr8 (532-650)||(26159175-26159294)
chr8 (805-838)||(18805304-18805337)
[»] chr2 (40 HSPs)
chr2 (655-837)||(11090513-11090695)
chr2 (662-839)||(40815714-40815891)
chr2 (661-839)||(40027138-40027316)
chr2 (663-836)||(14432142-14432315)
chr2 (666-839)||(18451200-18451373)
chr2 (666-839)||(43058336-43058509)
chr2 (666-839)||(239356-239528)
chr2 (666-839)||(22374323-22374496)
chr2 (662-839)||(3025465-3025641)
chr2 (666-837)||(28616616-28616788)
chr2 (666-839)||(1978111-1978284)
chr2 (661-839)||(26538095-26538273)
chr2 (665-832)||(8425736-8425903)
chr2 (666-832)||(26538454-26538621)
chr2 (666-823)||(40815348-40815506)
chr2 (660-803)||(20444746-20444889)
chr2 (666-823)||(7446730-7446888)
chr2 (666-803)||(35781068-35781205)
chr2 (660-789)||(40027559-40027688)
chr2 (661-837)||(7446340-7446519)
chr2 (661-823)||(18450828-18450991)
chr2 (666-789)||(22374744-22374867)
chr2 (666-803)||(35779711-35779848)
chr2 (666-778)||(11090950-11091062)
chr2 (666-803)||(15551502-15551639)
chr2 (666-788)||(20440451-20440573)
chr2 (666-780)||(28847123-28847237)
chr2 (661-789)||(28617033-28617161)
chr2 (666-789)||(1978528-1978651)
chr2 (670-823)||(239736-239890)
chr2 (665-822)||(8425357-8425514)
chr2 (666-823)||(43058717-43058874)
chr2 (666-803)||(8972240-8972377)
chr2 (666-823)||(14432525-14432683)
chr2 (666-822)||(3025848-3026003)
chr2 (387-473)||(9363209-9363293)
chr2 (211-305)||(9363367-9363454)
chr2 (666-789)||(15552473-15552595)
chr2 (794-839)||(28143400-28143445)
chr2 (158-204)||(9295291-9295337)
[»] scaffold0295 (2 HSPs)
scaffold0295 (666-839)||(4796-4969)
scaffold0295 (666-777)||(5222-5333)
[»] chr6 (34 HSPs)
chr6 (666-839)||(10900299-10900472)
chr6 (661-839)||(15828010-15828188)
chr6 (666-839)||(20741103-20741276)
chr6 (666-839)||(11276951-11277124)
chr6 (666-839)||(18257140-18257313)
chr6 (666-837)||(12935528-12935699)
chr6 (666-839)||(18505288-18505461)
chr6 (666-837)||(1149802-1149974)
chr6 (666-823)||(2319675-2319832)
chr6 (666-839)||(28472640-28472812)
chr6 (666-839)||(29859829-29860001)
chr6 (666-839)||(31470685-31470858)
chr6 (664-839)||(2322588-2322762)
chr6 (666-839)||(11444990-11445163)
chr6 (665-832)||(10899941-10900109)
chr6 (666-823)||(11445371-11445529)
chr6 (666-823)||(12935160-12935318)
chr6 (666-823)||(23075512-23075670)
chr6 (664-823)||(18504920-18505080)
chr6 (661-839)||(23073997-23074164)
chr6 (666-823)||(22219737-22219895)
chr6 (666-826)||(4811375-4811535)
chr6 (660-823)||(20741485-20741652)
chr6 (666-789)||(4811675-4811798)
chr6 (658-832)||(11276585-11276760)
chr6 (661-823)||(31470313-31470476)
chr6 (661-791)||(3835143-3835273)
chr6 (666-780)||(18257565-18257679)
chr6 (666-789)||(15827641-15827766)
chr6 (666-789)||(29033437-29033560)
chr6 (666-803)||(18296148-18296284)
chr6 (666-803)||(29035042-29035179)
chr6 (666-749)||(1149468-1149551)
chr6 (756-838)||(35163557-35163639)
[»] chr5 (45 HSPs)
chr5 (666-839)||(2865124-2865297)
chr5 (666-835)||(14215616-14215785)
chr5 (666-839)||(8647441-8647614)
chr5 (666-839)||(18183338-18183511)
chr5 (666-839)||(5819298-5819471)
chr5 (662-839)||(15372242-15372419)
chr5 (666-839)||(19359139-19359312)
chr5 (666-839)||(24362205-24362378)
chr5 (666-839)||(15708974-15709146)
chr5 (661-839)||(29455111-29455289)
chr5 (666-839)||(8460933-8461106)
chr5 (706-839)||(164560-164693)
chr5 (660-839)||(16018586-16018763)
chr5 (669-823)||(24361843-24361997)
chr5 (666-823)||(2864757-2864915)
chr5 (662-823)||(18182969-18183131)
chr5 (669-823)||(24325218-24325372)
chr5 (651-823)||(5818917-5819090)
chr5 (666-839)||(24331929-24332106)
chr5 (666-823)||(8647822-8647980)
chr5 (666-828)||(14463901-14464062)
chr5 (666-823)||(19359520-19359678)
chr5 (685-839)||(25000112-25000266)
chr5 (661-823)||(8461315-8461478)
chr5 (666-823)||(14215244-14215402)
chr5 (666-823)||(24331562-24331722)
chr5 (659-825)||(25000471-25000638)
chr5 (666-822)||(164194-164350)
chr5 (666-801)||(4219666-4219800)
chr5 (661-823)||(29454738-29454901)
chr5 (666-803)||(7349422-7349559)
chr5 (662-825)||(16018969-16019133)
chr5 (684-791)||(4624642-4624749)
chr5 (666-783)||(4222147-4222264)
chr5 (666-804)||(4623151-4623287)
chr5 (666-801)||(7348562-7348697)
chr5 (666-823)||(15709353-15709510)
chr5 (666-781)||(6018317-6018431)
chr5 (703-801)||(6019177-6019276)
chr5 (666-776)||(15371874-15371983)
chr5 (505-554)||(37511204-37511253)
chr5 (745-803)||(13814133-13814190)
chr5 (625-663)||(15079021-15079059)
chr5 (794-823)||(14340793-14340822)
chr5 (794-839)||(16752712-16752757)
[»] scaffold0007 (3 HSPs)
scaffold0007 (661-839)||(64300-64478)
scaffold0007 (660-778)||(64735-64853)
scaffold0007 (794-839)||(205738-205783)
[»] chr4 (58 HSPs)
chr4 (666-839)||(46193774-46193947)
chr4 (659-839)||(22170306-22170485)
chr4 (661-839)||(15523603-15523781)
chr4 (666-839)||(11153516-11153689)
chr4 (666-839)||(12234332-12234505)
chr4 (666-839)||(33109687-33109860)
chr4 (662-839)||(54995437-54995613)
chr4 (666-832)||(38962195-38962361)
chr4 (666-839)||(4219560-4219733)
chr4 (662-839)||(22434547-22434722)
chr4 (666-839)||(51020800-51020973)
chr4 (666-833)||(25447611-25447778)
chr4 (666-839)||(25937673-25937846)
chr4 (666-839)||(48526199-48526371)
chr4 (666-839)||(23494446-23494619)
chr4 (660-839)||(2118665-2118843)
chr4 (732-839)||(12503805-12503912)
chr4 (662-839)||(45082431-45082606)
chr4 (657-789)||(12234748-12234880)
chr4 (666-823)||(20470895-20471053)
chr4 (666-823)||(45082808-45082966)
chr4 (666-825)||(46193408-46193568)
chr4 (662-823)||(4219943-4220105)
chr4 (666-823)||(22434182-22434340)
chr4 (666-823)||(25447250-25447408)
chr4 (662-823)||(54995068-54995230)
chr4 (666-779)||(23494872-23494985)
chr4 (661-789)||(18751597-18751725)
chr4 (660-823)||(48526565-48526729)
chr4 (666-822)||(15523238-15523395)
chr4 (666-777)||(18763951-18764062)
chr4 (666-789)||(33109883-33110006)
chr4 (659-823)||(11153142-11153307)
chr4 (666-789)||(2118296-2118419)
chr4 (660-789)||(25938090-25938219)
chr4 (666-803)||(44892553-44892690)
chr4 (666-803)||(48293597-48293734)
chr4 (662-803)||(48713751-48713892)
chr4 (660-791)||(16690933-16691064)
chr4 (657-791)||(44890511-44890645)
chr4 (666-803)||(48294947-48295085)
chr4 (666-789)||(51021215-51021337)
chr4 (684-823)||(12503457-12503597)
chr4 (684-803)||(43243686-43243804)
chr4 (684-791)||(43281208-43281314)
chr4 (666-803)||(20958266-20958401)
chr4 (718-803)||(43242325-43242410)
chr4 (666-791)||(48708298-48708423)
chr4 (772-839)||(18751971-18752038)
chr4 (666-780)||(35363028-35363143)
chr4 (670-801)||(20957196-20957327)
chr4 (666-791)||(16691489-16691613)
chr4 (794-839)||(17504104-17504149)
chr4 (661-730)||(16318254-16318323)
chr4 (799-839)||(17504329-17504369)
chr4 (799-839)||(35193443-35193483)
chr4 (806-839)||(40160236-40160269)
chr4 (661-789)||(10258306-10258434)
[»] scaffold0019 (1 HSPs)
scaffold0019 (666-839)||(134042-134215)
[»] scaffold0951 (2 HSPs)
scaffold0951 (666-837)||(1670-1841)
scaffold0951 (666-823)||(2051-2209)
[»] scaffold0273 (2 HSPs)
scaffold0273 (666-839)||(4576-4749)
scaffold0273 (703-823)||(4243-4364)
[»] scaffold1223 (2 HSPs)
scaffold1223 (666-839)||(756-928)
scaffold1223 (666-789)||(1160-1283)
[»] scaffold0417 (2 HSPs)
scaffold0417 (684-839)||(10642-10797)
scaffold0417 (666-789)||(11042-11165)
[»] scaffold0027 (2 HSPs)
scaffold0027 (666-839)||(42528-42700)
scaffold0027 (661-832)||(42167-42339)
[»] scaffold0432 (2 HSPs)
scaffold0432 (666-839)||(10242-10414)
scaffold0432 (659-770)||(9928-10039)
[»] scaffold0157 (2 HSPs)
scaffold0157 (732-839)||(16565-16672)
scaffold0157 (684-823)||(16880-17020)
[»] scaffold0176 (2 HSPs)
scaffold0176 (660-830)||(18832-19001)
scaffold0176 (666-760)||(19069-19163)
[»] scaffold0113 (1 HSPs)
scaffold0113 (658-789)||(28662-28793)
[»] scaffold1585 (1 HSPs)
scaffold1585 (666-803)||(570-707)
[»] scaffold0076 (1 HSPs)
scaffold0076 (656-766)||(8451-8561)
[»] scaffold0168 (1 HSPs)
scaffold0168 (721-803)||(7693-7775)
[»] scaffold0057 (1 HSPs)
scaffold0057 (664-803)||(61863-62002)
[»] scaffold1696 (1 HSPs)
scaffold1696 (667-779)||(454-565)


Alignment Details
Target: chr1 (Bit Score: 329; Significance: 0; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 329; E-Value: 0
Query Start/End: Original strand, 211 - 662
Target Start/End: Original strand, 29462487 - 29462937
Alignment:
Q  211 ctcagagccagaatagaatattgaagatgaagaaaaaagaaattgaagatcggataccagatgtacgtgtcttcttttcttcccttttatttggtgtatc 310  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    |||||||||||||||| ||||||||||||||||||    
T  29462487 ctcagagccagaatagaatattgaagatgaagaaaaaagaaattgaagatcggataccaga----cgtgtcttcttttctttccttttatttggtgtatc 29462582  T
Q  311 acttgctctataattgcgaggatcctgcgacacttgttatacgcaattnnnnnnn-ggcatgtttgtcgttttgaggtaacaaagtgttgaaaaatggcc 409  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||         |||||||||||||||||||||||||||||||||||||| |||||    
T  29462583 acttgctctataattgcgaggatcctgcaacacttgttatacgcaataaaaaaaaaggcatgtttgtcgttttgaggtaacaaagtgttgaaaa-tggcc 29462681  T
Q  410 tatatgttgttaaggtgtaaaaaatgttgaaaaaatttataattaatgtgtgattttgtatgtacgcaannnnnnnnn---atgaaaataaatttaacac 506  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||             |||||||||||||||||||    
T  29462682 tatatgttgttaaggtgtaaaaaatgttgaaaaaatttataattaatgtgtgattttgtatgtacgcatttttttttttttatgaaaataaatttaacac 29462781  T
Q  507 tcatttcattaatcaatgaagagttaatacaaagaggaacataatcatgaacaaggtggctagcataagaattggcctccctagcgaagctatgagcaac 606  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  29462782 tcatttcattaatcaatgaagagttaatacaaagaggaacataatcatgaacatggtggctagcataagaattggcctccctagcgaagctatgagcaac 29462881  T
Q  607 catatgctcttgtctgtaaataaactttacctcaaagttacattacaaatttaaaa 662  Q
    |||||||||||||||| ||||||||||||| ||||||||||||| |||||||||||    
T  29462882 catatgctcttgtctgcaaataaactttacttcaaagttacattgcaaatttaaaa 29462937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 132; E-Value: 4e-68
Query Start/End: Original strand, 660 - 839
Target Start/End: Complemental strand, 50970826 - 50970647
Alignment:
Q  660 aaaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttt 759  Q
    ||||| ||||||||||||||||| ||||||||||| |||| ||||||||||| || |||| |||||||||| |||||||||||||||||| |||| ||||    
T  50970826 aaaggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 50970727  T
Q  760 tgttgcatttttcgtcctaccccccattttattttccaaaaacgtagagaaatgacagttttagacctaccccctatgct 839  Q
    ||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||    
T  50970726 tgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 50970647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 127; E-Value: 4e-65
Query Start/End: Original strand, 661 - 839
Target Start/End: Complemental strand, 5963125 - 5962947
Alignment:
Q  661 aaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatctttttt 760  Q
    |||||||||||||||||||||| ||||||||||| |||| | ||||||||||||||||| |||||||| | |||||||| ||| ||||| |||| |||||    
T  5963125 aaggtttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaatagaacaaaacagtctttcaattatcattttt 5963026  T
Q  761 gttgcatttttcgtcctaccccccattttattttccaaaaacgtagagaaatgacagttttagacctaccccctatgct 839  Q
    |||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||    
T  5963025 gttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 5962947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 126; E-Value: 2e-64
Query Start/End: Original strand, 666 - 839
Target Start/End: Complemental strand, 21856585 - 21856412
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||||||||||| ||||||||||| |||| | | |||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||| |||    
T  21856585 ttaattacacttttggtcctcgtgttttggcctactcatgaaactgatcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgctgc 21856486  T
Q  766 atttttcgtcctaccccccattttattttccaaaaacgtagagaaatgacagttttagacctaccccctatgct 839  Q
    |||||||||||||| |||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||    
T  21856485 atttttcgtcctactccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 21856412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 118; E-Value: 9e-60
Query Start/End: Original strand, 666 - 839
Target Start/End: Original strand, 17433219 - 17433392
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||||||||||| ||| ||||||| |||| | | |||||||| |||||| |||||||||| ||||||||||||||||||||||| ||||||||||    
T  17433219 ttaattacacttttggtcctcatgttttggcctactcatgaaactgaccatgcccttttaaaacagaacaaaacggtccttcaagtatcatttttgttgc 17433318  T
Q  766 atttttcgtcctaccccccattttattttccaaaaacgtagagaaatgacagttttagacctaccccctatgct 839  Q
    ||||||| ||||||||||||||||||| |||||||||| |||||||||||||||||||||||| ||||||||||    
T  17433319 atttttcatcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctatcccctatgct 17433392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 661 - 832
Target Start/End: Complemental strand, 15646742 - 15646571
Alignment:
Q  661 aaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatctttttt 760  Q
    |||| ||||||||||||||||| ||||||||||| |||| | |||||||||||| | || |||||||||| |||||||||||||||||| |||| |||||    
T  15646742 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctacccttttaaaacagaacaaaacggtccttcaattatcattttt 15646643  T
Q  761 gttgcatttttcgtcctaccccccattttattttccaaaaacgtagagaaatgacagttttagacctacccc 832  Q
    ||||||||||||||||||||||| |||||||| |||||||||| ||||||||||||||||||||||||||||    
T  15646642 gttgcatttttcgtcctacccccaattttattctccaaaaacgcagagaaatgacagttttagacctacccc 15646571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 99 - 214
Target Start/End: Original strand, 29461872 - 29461987
Alignment:
Q  99 cagattattattgataaatgtgtgctgtgtgtcagtttaagagttgacctgtgactagctaaagaaagaatcttggtatgaattgttttgtttccattca 198  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29461872 cagattattattgataaatgtgtgctgtgtgtcagtttaagagttgacctgtgactagctaaagaaagaatcttggtatgaattgttttgtttccattca 29461971  T
Q  199 ttgtttgagatcctca 214  Q
    ||||||||||||||||    
T  29461972 ttgtttgagatcctca 29461987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 115; E-Value: 6e-58
Query Start/End: Original strand, 666 - 832
Target Start/End: Original strand, 29306956 - 29307122
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||||||||| | ||||||||||| |||| | ||||||||| ||||| | |||||||||| |||||||||||||||||| |||| ||||||||||    
T  29306956 ttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcatgtccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 29307055  T
Q  766 atttttcgtcctaccccccattttattttccaaaaacgtagagaaatgacagttttagacctacccc 832  Q
    ||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||    
T  29307056 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctacccc 29307122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 115; E-Value: 6e-58
Query Start/End: Original strand, 661 - 839
Target Start/End: Original strand, 29869618 - 29869796
Alignment:
Q  661 aaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatctttttt 760  Q
    |||| ||||||||||||||||| ||||||||||| | || | ||||||||| || |||| |||||||||| |||||||||||||||||| |||  |||||    
T  29869618 aaggcttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattattattttt 29869717  T
Q  761 gttgcatttttcgtcctaccccccattttattttccaaaaacgtagagaaatgacagttttagacctaccccctatgct 839  Q
    ||||||||||||||||||| |||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||    
T  29869718 gttgcatttttcgtcctacaccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 29869796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 659 - 832
Target Start/End: Complemental strand, 5540367 - 5540194
Alignment:
Q  659 aaaaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatctttt 758  Q
    |||||| ||||||||||||||||| ||||||||||| |||| | ||||||||| || || | |||||||||| || ||||||||||||||| |||| |||    
T  5540367 aaaaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgtccttttaaaacagaagaaaacggtccttcaattatcattt 5540268  T
Q  759 ttgttgcatttttcgtcctaccccccattttattttccaaaaacgtagagaaatgacagttttagacctacccc 832  Q
    |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||    
T  5540267 ttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctacccc 5540194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 662 - 839
Target Start/End: Original strand, 15173095 - 15173272
Alignment:
Q  662 aggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttg 761  Q
    ||||||||||||||||||||| ||||||||||| |||| | ||||||||  || |||| ||||||||   ||||||||||| |||||| |||| ||||||    
T  15173095 aggtttaattacacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaattgaacaaaacggttcttcaattatcatttttg 15173194  T
Q  762 ttgcatttttcgtcctaccccccattttattttccaaaaacgtagagaaatgacagttttagacctaccccctatgct 839  Q
    ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||    
T  15173195 ttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 15173272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 666 - 839
Target Start/End: Original strand, 18984122 - 18984295
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||||||||||| |||||||||||  ||| | ||||||||| || |||| |||||||||| |||||||||||||||||| |||| ||||||||||    
T  18984122 ttaattacacttttggtcctcgtgttttggtctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 18984221  T
Q  766 atttttcgtcctaccccccattttattttccaaaaacgtagagaaatgacagttttagacctaccccctatgct 839  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||||| ||||||||||||| ||||||||||    
T  18984222 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgatagttttagacctaacccctatgct 18984295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 666 - 839
Target Start/End: Complemental strand, 33144461 - 33144288
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||||||||||| ||||||||||| |||| | ||||||||| || |||| |||||||||| ||||||| || ||||||| |||| ||||||||||    
T  33144461 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggaccttcaaatatcatttttgttgc 33144362  T
Q  766 atttttcgtcctaccccccattttattttccaaaaacgtagagaaatgacagttttagacctaccccctatgct 839  Q
    ||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||| |||||||    
T  33144361 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccctctatgct 33144288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 666 - 839
Target Start/End: Original strand, 9018976 - 9019149
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||||||||||| ||||||||||| |||| | ||||||||| |  |||| |||||||||| |||||||||||| ||||| |||| ||||||||||    
T  9018976 ttaattacacttttggtcctcgtgttttggcctactaacgaaactggttctgcccttttaaaacagaacaaaacggtcattcaactatcatttttgttgc 9019075  T
Q  766 atttttcgtcctaccccccattttattttccaaaaacgtagagaaatgacagttttagacctaccccctatgct 839  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||| | | ||||||| ||||||||||||||    
T  9019076 atttttcgtcctaccccccattttattctccaaaaacgcagagaaattatatttttagatctaccccctatgct 9019149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 666 - 839
Target Start/End: Original strand, 39154022 - 39154195
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    |||||||||||||||||  || ||||||| | || | ||||||||||||||||| |||||||||| |||||||||||||| ||| |||| ||||||||||    
T  39154022 ttaattacacttttggtcatcatgttttggcatactcacgaaactgatcatgcccttttaaaacagaacaaaacggtcctgcaattatcatttttgttgc 39154121  T
Q  766 atttttcgtcctaccccccattttattttccaaaaacgtagagaaatgacagttttagacctaccccctatgct 839  Q
    |||||||||||||||||||||| |||| |||||||||| | |||||||||||||||||||| | ||||||||||    
T  39154122 atttttcgtcctaccccccattctattctccaaaaacgcatagaaatgacagttttagacccatcccctatgct 39154195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 666 - 839
Target Start/End: Complemental strand, 8679083 - 8678911
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||||||||||| ||||||||||| |||| | ||| ||||| || |||| |||||||||| ||||||| |||| ||||| |||| ||||||||||    
T  8679083 ttaattacacttttggtcctcgtgttttggcctactcacggaactggtcctgcccttttaaaacagaacaaaaaggtcattcaattatcatttttgttgc 8678984  T
Q  766 atttttcgtcctaccccccattttattttccaaaaacgtagagaaatgacagttttagacctaccccctatgct 839  Q
    ||||||||||||| || |||||||||| |||||||| | |||||||||||||||||||||||||||||||||||    
T  8678983 atttttcgtccta-cctccattttattctccaaaaatgcagagaaatgacagttttagacctaccccctatgct 8678911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 666 - 837
Target Start/End: Complemental strand, 26859601 - 26859431
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||||||||| | |||||||||||  ||| | |||||||| ||| |||| |||||||||| ||||| |||||||||||| |||| ||||||||||    
T  26859601 ttaattacacttttgatcctcgtgttttgggctactcacgaaactaatcctgcccttttaaaacagaacaatacggtccttcaattatcatttttgttgc 26859502  T
Q  766 atttttcgtcctaccccccattttattttccaaaaacgtagagaaatgacagttttagacctaccccctatg 837  Q
    |||||||||||||||||||| |||||| |||||||||| |||||||| | ||||||||||||||| ||||||    
T  26859501 atttttcgtcctacccccca-tttattctccaaaaacgcagagaaataatagttttagacctacctcctatg 26859431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 666 - 832
Target Start/End: Complemental strand, 29307484 - 29307317
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    |||||| |||||||||| ||||||||||| |||| | ||||||||| || |||| |||||||||| |||||||||||||||||| |||| ||||||||||    
T  29307484 ttaattgcacttttggtcctcgtgttttgacctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 29307385  T
Q  766 atttttcgtcctaccccccatttt-attttccaaaaacgtagagaaatgacagttttagacctacccc 832  Q
    ||||||||||||||| || ||||| |   |||| ||||| ||||||||||||||||||||||||||||    
T  29307384 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttagacctacccc 29307317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 666 - 825
Target Start/End: Complemental strand, 17433757 - 17433597
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||||||||||| |||||||| || |||| | ||||||||| ||||||| |||||||||| |||||||||||||||||| |||| ||||||||||    
T  17433757 ttaattacacttttggtcctcgtgttctggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 17433658  T
Q  766 atttttcgtcctaccccccatttt-attttccaaaaacgtagagaaatgacagttttagac 825  Q
    ||||||||||||||| || ||||| |   | || ||||| |||||||||||||||||||||    
T  17433657 atttttcgtcctacctcctattttcaaacttcagaaacgcagagaaatgacagttttagac 17433597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 723 - 837
Target Start/End: Original strand, 4636033 - 4636146
Alignment:
Q  723 ttaaaacataacaaaacggtccttcaagtatcttttttgttgcatttttcgtcctaccccccattttattttccaaaaacgtagagaaatgacagtttta 822  Q
    |||||||| |||||| |||||||||||||||| |||||||||||||||| || ||||||||||||||||| | |||||||| ||||||||||||||||||    
T  4636033 ttaaaacagaacaaa-cggtccttcaagtatcatttttgttgcattttttgttctaccccccattttattcttcaaaaacgcagagaaatgacagtttta 4636131  T
Q  823 gacctaccccctatg 837  Q
    |||||||||||||||    
T  4636132 gacctaccccctatg 4636146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 666 - 780
Target Start/End: Original strand, 8678544 - 8678658
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||||||||||| ||||||||||| |||| | ||||||||| || |||| |||||||||| |||||||||||||||||| |||| ||||||||||    
T  8678544 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacaaaacaaaacggtccttcaattatcatttttgttgc 8678643  T
Q  766 atttttcgtcctacc 780  Q
    |||||||||||||||    
T  8678644 atttttcgtcctacc 8678658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 666 - 822
Target Start/End: Complemental strand, 4636513 - 4636356
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||||||||||| ||||||||||| |||| | |||||||||||| |||| |||||||||| ||||||||| |||||||| |||| ||||||||||    
T  4636513 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacgatccttcaattatcatttttgttgc 4636414  T
Q  766 atttttcgtcctaccccccatttt-attttccaaaaacgtagagaaatgacagtttta 822  Q
    ||||||||||| ||| || ||||| |   |||| ||||| |||||||||||| |||||    
T  4636413 atttttcgtcccacctcctattttcaaactccagaaacgcagagaaatgacaatttta 4636356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 661 - 789
Target Start/End: Complemental strand, 39154567 - 39154439
Alignment:
Q  661 aaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatctttttt 760  Q
    |||| ||||||||||||||||| ||||||||||| |||| | ||||||||| || |||  |||||||||||||||||| |||||||||| |||| |||||    
T  39154567 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacataacaaaatggtccttcaattatcattttt 39154468  T
Q  761 gttgcatttttcgtcctaccccccatttt 789  Q
    |||||||||||||||||||| || |||||    
T  39154467 gttgcatttttcgtcctacctcctatttt 39154439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 666 - 789
Target Start/End: Complemental strand, 29870161 - 29870038
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||||||||||| ||||||||||| |||| | | ||||||| || |||| |||||||||| |||||||||||||||||| |||| ||||||||||    
T  29870161 ttaattacacttttggtcctcgtgttttggcctactcatgaaactggtcctgccattttaaaacagaacaaaacggtccttcaattatcatttttgttgc 29870062  T
Q  766 atttttcgtcctaccccccatttt 789  Q
    ||||||||||||||| || |||||    
T  29870061 atttttcgtcctacctcctatttt 29870038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 666 - 823
Target Start/End: Original strand, 21856045 - 21856203
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||||||||||| |||||||||||  ||| | ||||||||| || |||| |||||||||| |||||||||||||||||| |||| ||||||||||    
T  21856045 ttaattacacttttggtcctcgtgttttgatctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 21856144  T
Q  766 atttttcgtcctaccccccatttt-attttccaaaaacgtagagaaatgacagttttag 823  Q
    ||||||| ||||| | || ||||| |   |||| ||||| |||||||||||||||||||    
T  21856145 atttttcatcctagctcctattttcaaactccagaaacgcagagaaatgacagttttag 21856203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 666 - 780
Target Start/End: Original strand, 26859062 - 26859176
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||||||||||| || |||||||| |||| | ||||||||| || |||| |||||||||| |||||||||||||||||| |||| ||||||||||    
T  26859062 ttaattacacttttggtccttgtgttttggcctactaacgaaactggtcctgccattttaaaacagaacaaaacggtccttcaattatcatttttgttgc 26859161  T
Q  766 atttttcgtcctacc 780  Q
    |||||||||||||||    
T  26859162 atttttcgtcctacc 26859176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 661 - 789
Target Start/End: Complemental strand, 18984666 - 18984538
Alignment:
Q  661 aaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatctttttt 760  Q
    |||| ||||||||||||||||| || |||||||| |||| | |||||| || || |||| |||||||||| |||||||||||||||||| |||| |||||    
T  18984666 aaggcttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 18984567  T
Q  761 gttgcatttttcgtcctaccccccatttt 789  Q
    |||||||||||||||||||| || |||||    
T  18984566 gttgcatttttcgtcctacctcctatttt 18984538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 666 - 821
Target Start/End: Original strand, 50970281 - 50970437
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||||||||||| ||||||||||| |||| | ||||||||| || |||  ||||||| || |||||||||||||||||| |||| ||||||||||    
T  50970281 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaatcagaacaaaacggtccttcaattatcatttttgttgc 50970380  T
Q  766 atttttcgtcctaccccccatttt-attttccaaaaacgtagagaaatgacagtttt 821  Q
    |||||||||||||||  | ||||| |   |||| ||||| |||||||||||||||||    
T  50970381 atttttcgtcctaccttctattttcaaactccagaaacgcagagaaatgacagtttt 50970437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 666 - 789
Target Start/End: Original strand, 5539819 - 5539942
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||||||||||| ||||||||||| |||| | |||||| || || |||| |||||||||| |||||||||||||||||| |||| |||||||||     
T  5539819 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgt 5539918  T
Q  766 atttttcgtcctaccccccatttt 789  Q
    ||||||||||||||| || |||||    
T  5539919 atttttcgtcctacctcctatttt 5539942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 666 - 832
Target Start/End: Complemental strand, 9019505 - 9019338
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||||||||||| ||||||||||| |||| | || |||||| |  |||| |||||||||| |||||||||||| ||||| |||| ||||||||||    
T  9019505 ttaattacacttttggtcctcgtgttttgacctactcacaaaactggttctgccattttaaaacagaacaaaacggtcattcaattatcatttttgttgc 9019406  T
Q  766 atttttcgtcctaccccccatttt-attttccaaaaacgtagagaaatgacagttttagacctacccc 832  Q
    ||||||||||||||| || ||||| |    ||| ||||| |||||||| |||||||||||||| ||||    
T  9019405 atttttcgtcctacctcctattttcaaaccccagaaacgcagagaaataacagttttagacctgcccc 9019338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 666 - 823
Target Start/End: Complemental strand, 15173635 - 15173478
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||||||||||| ||||||||||| |||| | || |||||| || |||||||| |||||| ||||||| |||||||||| |||| ||||||||||    
T  15173635 ttaattacacttttggtcctcgtgttttggcctactcacaaaactggtcctgcctttt-aaaacagaacaaaatggtccttcaattatcatttttgttgc 15173537  T
Q  766 atttttcgtcctaccccccatttt-attttccaaaaacgtagagaaatgacagttttag 823  Q
    ||||||||||||||| || ||||| |   || | ||||| |||||||||||||||||||    
T  15173536 atttttcgtcctacctcctattttcaaactctataaacgcagagaaatgacagttttag 15173478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 666 - 780
Target Start/End: Original strand, 15646195 - 15646309
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||| ||||||||| ||||||||||| |||| | ||||||||| ||||||| |||||||||| ||||||| ||| |||||| |||| ||||||||||    
T  15646195 ttaattatacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaatggtacttcaattatcatttttgttgc 15646294  T
Q  766 atttttcgtcctacc 780  Q
    |||||||||||||||    
T  15646295 atttttcgtcctacc 15646309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 671 - 823
Target Start/End: Original strand, 33143925 - 33144078
Alignment:
Q  671 tacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgcatttt 770  Q
    |||||||||||| ||||||||||| |||| | ||||||||| || |||| |||||||||| |||||||||||||||||| |||| ||||| |||||| ||    
T  33143925 tacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttttttgcatatt 33144024  T
Q  771 tcgtcctaccccccatttt-attttccaaaaacgtagagaaatgacagttttag 823  Q
    |||||||||| || ||||| |   || | ||||| |||||||||||||||||||    
T  33144025 tcgtcctacctcctattttcaaactctagaaacgcagagaaatgacagttttag 33144078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 661 - 803
Target Start/End: Original strand, 52268288 - 52268430
Alignment:
Q  661 aaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatctttttt 760  Q
    |||| ||||||||||||||||| ||||| ||||| |||  | |||||| || || |||| |||||||||| |||||||| ||| ||||  |||| |||||    
T  52268288 aaggcttaattacacttttggtcctcgtattttggcctgctcacgaaattggtcctgcccttttaaaacagaacaaaactgtcattcagttatcattttt 52268387  T
Q  761 gttgcatttttcgtcctaccccccattttattttccaaaaacg 803  Q
    |||||| |||||||||||||||||||||| |  ||||||||||    
T  52268388 gttgcacttttcgtcctaccccccattttttcctccaaaaacg 52268430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 666 - 789
Target Start/End: Original strand, 5962581 - 5962704
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||| ||||||| |||||||| ||  ||||| ||||||||| ||  ||| |||||||||| |||||||||||| ||||| |||| ||||||||||    
T  5962581 ttaattacatttttggtcctcgtgttatggtctattcacgaaactggtccggcccttttaaaacagaacaaaacggtctttcaactatcatttttgttgc 5962680  T
Q  766 atttttcgtcctaccccccatttt 789  Q
    ||||||||| ||||| || |||||    
T  5962681 atttttcgttctacctcctatttt 5962704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 666 - 749
Target Start/End: Complemental strand, 2733499 - 2733416
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaa 749  Q
    ||||||| ||||||||| || |||||||| ||||||  ||||| || || |||| |||||||||| ||||||||||||||||||    
T  2733499 ttaattatacttttggtccttgtgttttggcctattcgcgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaa 2733416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 666 - 738
Target Start/End: Original strand, 47826967 - 47827039
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaa 738  Q
    ||||||||||||||||| |||||||||||  ||| | |||||| || ||||||| |||||||| |||||||||    
T  47826967 ttaattacacttttggtcctcgtgttttggtctactcacgaaaatggtcatgcccttttaaaatataacaaaa 47827039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 799 - 833
Target Start/End: Complemental strand, 17088550 - 17088516
Alignment:
Q  799 aaacgtagagaaatgacagttttagacctaccccc 833  Q
    ||||| |||||||||||||||||||||||||||||    
T  17088550 aaacgcagagaaatgacagttttagacctaccccc 17088516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 299 - 357
Target Start/End: Original strand, 29454488 - 29454546
Alignment:
Q  299 atttggtgtatcacttgctctataattgcgaggatcctgcgacacttgttatacgcaat 357  Q
    ||||||||||||||||| ||| ||||||| ||||||||||| ||| || |||| |||||    
T  29454488 atttggtgtatcacttggtctgtaattgctaggatcctgcggcacctgctataagcaat 29454546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 137; Significance: 4e-71; HSPs: 56)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 137; E-Value: 4e-71
Query Start/End: Original strand, 663 - 839
Target Start/End: Original strand, 41046700 - 41046876
Alignment:
Q  663 ggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgt 762  Q
    |||||||||||||||||||| ||||||||||| |||| ||||||||||| ||||||| |||||||||| |||||||||||||||||| |||| |||||||    
T  41046700 ggtttaattacacttttggtcctcgtgttttggcctaattacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 41046799  T
Q  763 tgcatttttcgtcctaccccccattttattttccaaaaacgtagagaaatgacagttttagacctaccccctatgct 839  Q
    |||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||    
T  41046800 tgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 41046876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 127; E-Value: 4e-65
Query Start/End: Original strand, 657 - 839
Target Start/End: Original strand, 5136974 - 5137156
Alignment:
Q  657 ttaaaaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatctt 756  Q
    |||| ||||||||||||||||||||| ||||||||||| || | | |||||| || ||||||| |||||||||| |||||||||||||||||| |||| |    
T  5136974 ttaataggtttaattacacttttggtcctcgtgttttggccaactcacgaaattggtcatgcccttttaaaacagaacaaaacggtccttcaattatcat 5137073  T
Q  757 ttttgttgcatttttcgtcctaccccccattttattttccaaaaacgtagagaaatgacagttttagacctaccccctatgct 839  Q
    |||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||    
T  5137074 ttttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 5137156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 125; E-Value: 6e-64
Query Start/End: Original strand, 659 - 839
Target Start/End: Original strand, 37726925 - 37727105
Alignment:
Q  659 aaaaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatctttt 758  Q
    |||||| ||||||||||||||||| |||||||||||  ||  ||||||||||| |  |||| ||||||||||||||||||||||||||||| |||| |||    
T  37726925 aaaaggcttaattacacttttggtcctcgtgttttggtctgcttacgaaactggttctgcccttttaaaacataacaaaacggtccttcaattatcattt 37727024  T
Q  759 ttgttgcatttttcgtcctaccccccattttattttccaaaaacgtagagaaatgacagttttagacctaccccctatgct 839  Q
    |||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||    
T  37727025 ttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 37727105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 122; E-Value: 4e-62
Query Start/End: Original strand, 666 - 839
Target Start/End: Complemental strand, 24301098 - 24300925
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||||||||||| ||||||||||| |||| | |||||| || || |||| |||||||||| |||||||||||||||| |||||| ||||||||||    
T  24301098 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgccattttaaaacaaaacaaaacggtccttcgagtatcatttttgttgc 24300999  T
Q  766 atttttcgtcctaccccccattttattttccaaaaacgtagagaaatgacagttttagacctaccccctatgct 839  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||    
T  24300998 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 24300925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 118; E-Value: 9e-60
Query Start/End: Original strand, 666 - 839
Target Start/End: Complemental strand, 39556119 - 39555946
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||||||||||| ||||||||||| |||| | ||||||||| || |||| |||||||||| ||||||| |||||||||| |||| |||| |||||    
T  39556119 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaattatcattttcgttgc 39556020  T
Q  766 atttttcgtcctaccccccattttattttccaaaaacgtagagaaatgacagttttagacctaccccctatgct 839  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||    
T  39556019 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 39555946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 666 - 837
Target Start/End: Original strand, 20840563 - 20840734
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||||||||||| ||||||||||| |||| | ||||||||| || ||||||||||||| | |||||||||||||||||| |||| ||||||||||    
T  20840563 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcctttttaaaatagaacaaaacggtccttcaattatcatttttgttgc 20840662  T
Q  766 atttttcgtcctaccccccattttattttccaaaaacgtagagaaatgacagttttagacctaccccctatg 837  Q
    ||||||||||||||||||||||||||| |||  ||||| |||||||||||||||||||||||||||||||||    
T  20840663 atttttcgtcctaccccccattttattctccttaaacgcagagaaatgacagttttagacctaccccctatg 20840734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 666 - 839
Target Start/End: Complemental strand, 31779194 - 31779021
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||||||||||| ||||||||||| |||| | ||||||||| || |||| |||||||||| |||||||||||||||||| |||| ||||||||||    
T  31779194 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 31779095  T
Q  766 atttttcgtcctaccccccattttattttccaaaaacgtagagaaatgacagttttagacctaccccctatgct 839  Q
    ||||||||||| ||||||||||||||| |||||||||| ||||||||| ||||||||||| |||||||||||||    
T  31779094 atttttcgtcccaccccccattttattctccaaaaacgcagagaaatgtcagttttagacgtaccccctatgct 31779021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 666 - 832
Target Start/End: Original strand, 43973444 - 43973610
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||||||||||| ||||||||||| |||| | |||||| |||| ||||| |||||||||| |||||||||||||||||| |||| ||||||||||    
T  43973444 ttaattacacttttggtcctcgtgttttgtcctactcacgaaaatgattatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 43973543  T
Q  766 atttttcgtcctaccccccattttattttccaaaaacgtagagaaatgacagttttagacctacccc 832  Q
    ||||||||||||||||||||||||||| |||||||||| ||| |||| |||||||||||||||||||    
T  43973544 atttttcgtcctaccccccattttattctccaaaaacgcagataaataacagttttagacctacccc 43973610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 110; E-Value: 6e-55
Query Start/End: Original strand, 666 - 839
Target Start/End: Complemental strand, 25853769 - 25853596
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||||||||| | |||||||||||| ||| | ||||||||| || || | |||||||||| ||||||| |||||||||| |||| ||||||||||    
T  25853769 ttaattacacttttgatcctcgtgttttgctctactcacgaaactggtcttgtcattttaaaacagaacaaaatggtccttcaattatcatttttgttgc 25853670  T
Q  766 atttttcgtcctaccccccattttattttccaaaaacgtagagaaatgacagttttagacctaccccctatgct 839  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||| ||||||||||||||||||||||||||    
T  25853669 atttttcgtcctaccccccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 25853596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 659 - 839
Target Start/End: Original strand, 23644458 - 23644638
Alignment:
Q  659 aaaaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatctttt 758  Q
    |||||| ||||||||||||||||| ||||| ||||| |||| | |||||| || || |||| |||||||||| |||||||| ||||||||| |||| |||    
T  23644458 aaaaggcttaattacacttttggtcctcgtattttggcctactcacgaaattggtcctgccattttaaaacagaacaaaacagtccttcaattatcattt 23644557  T
Q  759 ttgttgcatttttcgtcctaccccccattttattttccaaaaacgtagagaaatgacagttttagacctaccccctatgct 839  Q
    |||||||||||||||||||||||||||||||||| |||||||||| |||||||| | ||||||||||||||||||||||||    
T  23644558 ttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatgct 23644638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 666 - 839
Target Start/End: Complemental strand, 26837897 - 26837725
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||||||||||| ||||||||||| |||| ||||||||||| |  |||| ||| |||| | |||||||||||| |||||||||| ||||||||||    
T  26837897 ttaattacacttttggtcctcgtgttttggcctacttacgaaactggttctgcccttt-aaaatagaacaaaacggtcattcaagtatcatttttgttgc 26837799  T
Q  766 atttttcgtcctaccccccattttattttccaaaaacgtagagaaatgacagttttagacctaccccctatgct 839  Q
    |||||| |||||||||||||||||||| |||||||| | ||||||||||||||||||||| |||||||||||||    
T  26837798 attttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagacttaccccctatgct 26837725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 666 - 839
Target Start/End: Original strand, 30104485 - 30104657
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||||||||||| ||||||||||| |||| | |||||| || || |||| |||||||||| || | ||||||||||||| |||| ||||||||||    
T  30104485 ttaattacacttttggtcctcgtgttttgacctactcacgaaattggtcctgcccttttaaaacaaaatagaacggtccttcaattatcatttttgttgc 30104584  T
Q  766 atttttcgtcctaccccccattttattttccaaaaacgtagagaaatgacagttttagacctaccccctatgct 839  Q
    ||||||||||||| ||||||||||||| || ||||||| |||||||||||||||||||||||||||||||||||    
T  30104585 atttttcgtccta-cccccattttattatctaaaaacgcagagaaatgacagttttagacctaccccctatgct 30104657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 661 - 839
Target Start/End: Complemental strand, 27394124 - 27393946
Alignment:
Q  661 aaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatctttttt 760  Q
    |||| ||||||||||||||||| ||||||||||| |||| | ||||||  | || ||||||||||||||| ||||||||| |||||||| |||| |||||    
T  27394124 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaataggtcctgcctttttaaaacagaacaaaacgatccttcaattatcattttt 27394025  T
Q  761 gttgcatttttcgtcctaccccccattttattttccaaaaacgtagagaaatgacagttttagacctaccccctatgct 839  Q
    |||||||||| | |||||||||| |||||||| |||||||||| |||||||| ||||||||||||||||||| ||||||    
T  27394024 gttgcattttccatcctacccccaattttattctccaaaaacgcagagaaataacagttttagacctaccccatatgct 27393946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 669 - 818
Target Start/End: Original strand, 48452995 - 48453144
Alignment:
Q  669 attacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgcatt 768  Q
    ||||||||||||||  |||||||||| |||| | ||||||||| || |||| |||||||||| |||||||||||||||||| |||| |||||||||||||    
T  48452995 attacacttttggtcatcgtgttttggcctactcacgaaactggtcctgccattttaaaacagaacaaaacggtccttcaattatcatttttgttgcatt 48453094  T
Q  769 tttcgtcctaccccccattttattttccaaaaacgtagagaaatgacagt 818  Q
    |||||||||||||||||||||||| |||||||||| ||||||||||||||    
T  48453095 tttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagt 48453144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 667 - 839
Target Start/End: Complemental strand, 22425354 - 22425182
Alignment:
Q  667 taattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgca 766  Q
    |||||||||||||||| ||||||||| | |||| | ||||| ||| ||||||| || ||||||| ||||||||||| |||||| |||| |||||||||||    
T  22425354 taattacacttttggtcctcgtgtttcggcctactcacgaatctggtcatgcccttgtaaaacagaacaaaacggtacttcaattatcatttttgttgca 22425255  T
Q  767 tttttcgtcctaccccccattttattttccaaaaacgtagagaaatgacagttttagacctaccccctatgct 839  Q
    |||||||||||||||||||||||||| |||||||||| |||||||| | | ||||||| ||||||||||||||    
T  22425254 tttttcgtcctaccccccattttattctccaaaaacgcagagaaattagatttttagatctaccccctatgct 22425182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 666 - 837
Target Start/End: Complemental strand, 32535505 - 32535330
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttt-----ttt 760  Q
    ||||||||||||||||| ||||||||||| |||| | ||||||||| || |||| |||||||||| |||||||||||||||||| |||| ||     |||    
T  32535505 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattaaattttt 32535406  T
Q  761 gttgcatttttcgtcctaccccccattttattttccaaaaacgtagagaaatgacagttttagacctaccccctatg 837  Q
    ||||||||||||||||||||||| |||||||| |||||||||| |||||||||| ||||||||||||| ||||||||    
T  32535405 gttgcatttttcgtcctaccccc-attttattctccaaaaacgcagagaaatgatagttttagacctaacccctatg 32535330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 662 - 839
Target Start/End: Complemental strand, 26275112 - 26274936
Alignment:
Q  662 aggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttg 761  Q
    ||||||||||| | ||||||  || |||||||| |||| | ||||||||| || | || |||||||||| || |||||||||| |||| |||| ||||||    
T  26275112 aggtttaattataattttggcccttgtgttttgacctactcacgaaactggtcctacccttttaaaacagaataaaacggtccctcaattatcatttttg 26275013  T
Q  762 ttgcatttttcgtcctaccccccattttattttccaaaaacgtagagaaatgacagttttagacctaccccctatgct 839  Q
    |||| |||||||||||||||||||||||||| ||||||| || |||||||||||||||||||||||||||||||||||    
T  26275012 ttgc-tttttcgtcctaccccccattttattctccaaaaccgcagagaaatgacagttttagacctaccccctatgct 26274936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 666 - 823
Target Start/End: Original strand, 17464494 - 17464652
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||||||||||| ||||||||||| ||||||  |||||||| ||||||| |||||||||| |||||||||||||||||| |||| ||||||||||    
T  17464494 ttaattacacttttggtcctcgtgttttggcctattcgcgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 17464593  T
Q  766 atttttcgtcctaccccccatttt-attttccaaaaacgtagagaaatgacagttttag 823  Q
    ||||||||||||||| || ||||| |   |||| ||||||| |||||||||||||||||    
T  17464594 atttttcgtcctacctcctattttcaaactccagaaacgtaaagaaatgacagttttag 17464652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 659 - 823
Target Start/End: Complemental strand, 20841110 - 20840945
Alignment:
Q  659 aaaaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatctttt 758  Q
    |||||| ||||||||||||||||| ||||||||||| |||| | ||||||||| || ||||||||||||||| |||||||||||||||||| |||| |||    
T  20841110 aaaaggcttaattacacttttggtgctcgtgttttggcctactcacgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaattatcattt 20841011  T
Q  759 ttgttgcatttttcgtcctaccccccatttt-attttccaaaaacgtagagaaatgacagttttag 823  Q
    |||||||||||||||||||||| || ||||| |   |||| ||||| ||||||||| |||||||||    
T  20841010 ttgttgcatttttcgtcctacctcctattttcaaactccataaacgcagagaaatggcagttttag 20840945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 661 - 839
Target Start/End: Complemental strand, 17465039 - 17464860
Alignment:
Q  661 aaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatctttttt 760  Q
    |||| ||||||||| ||||||| ||||||||||| ||||   | ||||||| ||   || |||||||| | |||||||||||||||||| |||| |||||    
T  17465039 aaggcttaattacatttttggtcctcgtgttttggcctacgcatgaaactggtctgacccttttaaaatagaacaaaacggtccttcaattatcattttt 17464940  T
Q  761 gttgcatttttc-gtcctaccccccattttattttccaaaaacgtagagaaatgacagttttagacctaccccctatgct 839  Q
    |||||||||||  |||||||||||||||||||| |||||||| | |||||||||||||||||||||||| ||||||||||    
T  17464939 gttgcatttttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagacctaacccctatgct 17464860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 661 - 823
Target Start/End: Original strand, 27393659 - 27393822
Alignment:
Q  661 aaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatctttttt 760  Q
    |||| ||||||||||||||||| ||||||||||| |||| | || |||||| || |||| |||||||||| |||||||||||||||||| |||| |||||    
T  27393659 aaggcttaattacacttttggtcctcgtgttttgacctactcacaaaactggtcctgccattttaaaacagaacaaaacggtccttcaattatcattttt 27393758  T
Q  761 gttgcatttttcgtcctaccccccatttt-attttccaaaaacgtagagaaatgacagttttag 823  Q
    ||||||||||||||||||||||| ||||| |    ||| ||||| |||||||||||||||||||    
T  27393759 gttgcatttttcgtcctaccccctattttcaaaccccagaaacgcagagaaatgacagttttag 27393822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 659 - 789
Target Start/End: Original strand, 32534955 - 32535085
Alignment:
Q  659 aaaaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatctttt 758  Q
    |||||||||||||||||||||||| ||||||||||| | || | |||||| || || ||||||||||||||| |||||||||||||||||| |||| |||    
T  32534955 aaaaggtttaattacacttttggtcctcgtgttttggcatactcacgaaattggtcctgcctttttaaaacagaacaaaacggtccttcaattatcattt 32535054  T
Q  759 ttgttgcatttttcgtcctaccccccatttt 789  Q
    |||||||||||||||||||||| || |||||    
T  32535055 ttgttgcatttttcgtcctacctcctatttt 32535085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 660 - 823
Target Start/End: Original strand, 39555575 - 39555739
Alignment:
Q  660 aaaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttt 759  Q
    ||||| ||||||||||||||||| ||||||||||| |||| | ||||||||| || |||| |||||||||| ||||||| |||||||||| |||| ||||    
T  39555575 aaaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccattttaaaacagaacaaaatggtccttcaattatcatttt 39555674  T
Q  760 tgttgcatttttcgtcctaccccccatttt-attttccaaaaacgtagagaaatgacagttttag 823  Q
    ||||||||||||||| ||||| || ||||| |   |||| ||||| |||||||||||||||||||    
T  39555675 tgttgcatttttcgttctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 39555739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 666 - 823
Target Start/End: Complemental strand, 4275906 - 4275748
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||||||||||| ||||||||||| |||| | ||||||||| ||||||  |||||||||| ||||||||||||||| || |||| ||||||||||    
T  4275906 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgctcttttaaaacagaacaaaacggtcctttaattatcatttttgttgc 4275807  T
Q  766 atttttcgtcctaccccccatttt-attttccaaaaacgtagagaaatgacagttttag 823  Q
    ||||||||||||||| || ||||| |   |||| ||||| ||||||||| |||||||||    
T  4275806 atttttcgtcctacctcctattttcaaactccataaacgcagagaaatggcagttttag 4275748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 666 - 823
Target Start/End: Complemental strand, 37727472 - 37727314
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||||||||||| ||| ||||||| |||| | ||||||||| || |||  |||||||||| |||||||||||||||||| |||| ||||||||||    
T  37727472 ttaattacacttttggtcctcatgttttggcctactcacgaaactggtcctgctcttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 37727373  T
Q  766 atttttcgtcctaccccccatttt-attttccaaaaacgtagagaaatgacagttttag 823  Q
    ||||||||||||||| || ||||| |   |||| ||||| |||||||||||||||||||    
T  37727372 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 37727314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 666 - 823
Target Start/End: Complemental strand, 43973982 - 43973824
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||||||||||| ||||||||||| |||| | ||||||||| |  |||| |||||||||| |||||||||||| ||||| |||| ||||||||||    
T  43973982 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggttctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 43973883  T
Q  766 atttttcgtcctaccccccatttt-attttccaaaaacgtagagaaatgacagttttag 823  Q
    ||||||||||||||| || ||||| ||   ||| ||||| |||||||||||||||||||    
T  43973882 atttttcgtcctacctcctattttcataccccagaaacgcagagaaatgacagttttag 43973824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 663 - 803
Target Start/End: Complemental strand, 25612522 - 25612382
Alignment:
Q  663 ggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgt 762  Q
    |||||||||||||||||||| ||||||||||| |||| | |||||| || || |||| |||||||| | |||||||| ||| || || |||| |||||||    
T  25612522 ggtttaattacacttttggtcctcgtgttttgacctactcacgaaattggtcctgcccttttaaaatagaacaaaactgtcttttaattatcatttttgt 25612423  T
Q  763 tgcatttttcgtcctaccccccattttattttccaaaaacg 803  Q
    |||||||||||||||||||||||||||||  ||||||||||    
T  25612422 tgcatttttcgtcctaccccccattttatcctccaaaaacg 25612382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 666 - 823
Target Start/End: Original strand, 22424817 - 22424975
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    |||||||||||||||||||||||||||   |||| ||||||||||| |  || | |||||||||| |||||||||||||||||| |||| ||||||||||    
T  22424817 ttaattacacttttggttctcgtgtttaagcctacttacgaaactggttctgtccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 22424916  T
Q  766 atttttcgtcctaccccccatttt-attttccaaaaacgtagagaaatgacagttttag 823  Q
    ||||||||||||||| || ||||| |   |||| ||| | |||||||||||||||||||    
T  22424917 atttttcgtcctacctcctattttcaaactccagaaatgcagagaaatgacagttttag 22424975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 666 - 823
Target Start/End: Original strand, 25853237 - 25853395
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||||||||||| ||||||||||| |||| | |||||| || ||||||| |||||||| | |||||||||||||||||| |||| ||||||||||    
T  25853237 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcatgcccttttaaaatagaacaaaacggtccttcaattatcatttttgttgc 25853336  T
Q  766 atttttcgtcctaccccccatttt-attttccaaaaacgtagagaaatgacagttttag 823  Q
    ||||||||| ||||| || ||||| |   |||| ||||| |||||||| ||||||||||    
T  25853337 atttttcgttctacctcctattttcaaactccagaaacgcagagaaataacagttttag 25853395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 661 - 789
Target Start/End: Complemental strand, 30098310 - 30098182
Alignment:
Q  661 aaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatctttttt 760  Q
    |||| ||||||||||||||||| ||||||||||| | || | ||||||||| || |||| |||||||||| ||||||| |||||||||| |||| |||||    
T  30098310 aaggcttaattacacttttggtcctcgtgttttgacatactcacgaaactggtcttgcccttttaaaacagaacaaaatggtccttcaattatcattttt 30098211  T
Q  761 gttgcatttttcgtcctaccccccatttt 789  Q
    |||||||||||||||||||| || |||||    
T  30098210 gttgcatttttcgtcctacctcctatttt 30098182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 660 - 823
Target Start/End: Original strand, 31778650 - 31778814
Alignment:
Q  660 aaaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttt 759  Q
    ||||| ||||||||||||||||| |||||||||||  ||| | | ||||||| || |||| |||||||||| ||||||||||||||||   |||| ||||    
T  31778650 aaaggcttaattacacttttggtcctcgtgttttggtctactcatgaaactggtcctgcccttttaaaacagaacaaaacggtccttcgtttatcatttt 31778749  T
Q  760 tgttgcatttttcgtcctaccccccatttt-attttccaaaaacgtagagaaatgacagttttag 823  Q
    ||||||||||||||||||||| || ||||| |   |||| ||||| |||||||||||||||||||    
T  31778750 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 31778814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 662 - 823
Target Start/End: Original strand, 26837359 - 26837521
Alignment:
Q  662 aggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttg 761  Q
    ||||||||||||| ||||||| || || ||||| |||| | |||||| || || |||| ||||| |||||||| |||||||||||||| |||| ||||||    
T  26837359 aggtttaattacatttttggtccttgtattttggcctactcacgaaattggtcctgcccttttataacataacgaaacggtccttcaattatcatttttg 26837458  T
Q  762 ttgcatttttcgtcctaccccccatttt-attttccaaaaacgtagagaaatgacagttttag 823  Q
    ||||||||||||||||||| || ||||| |   |||| ||||| |||||||||||||||||||    
T  26837459 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 26837521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 666 - 784
Target Start/End: Original strand, 29801359 - 29801477
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    |||||||||||||||||  |||||||||| | || | || |||||| || |||| |||||||||| ||||||||||||||||||||||| ||||||||||    
T  29801359 ttaattacacttttggtcatcgtgttttggcatactcacaaaactggtcctgcccttttaaaacagaacaaaacggtccttcaagtatcatttttgttgc 29801458  T
Q  766 atttttcgtcctacccccc 784  Q
    |||||||||| ||||||||    
T  29801459 atttttcgtcttacccccc 29801477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 666 - 802
Target Start/End: Complemental strand, 23228549 - 23228414
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||||||||||| | ||||||||| |||| | |||||| |||||||||| |||||||||  |||||||  ||||||||| |||| ||||| ||||    
T  23228549 ttaattacacttttggtccccgtgttttggcctactcacgaaaatgatcatgcccttttaaaacg-aacaaaattgtccttcaattatcatttttattgc 23228451  T
Q  766 atttttcgtcctaccccccattttattttccaaaaac 802  Q
    ||||||||||||||| ||||||||||  |||||||||    
T  23228450 atttttcgtcctacctcccattttatcctccaaaaac 23228414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 666 - 825
Target Start/End: Complemental strand, 29801958 - 29801798
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||||||||| | ||||| ||||| |||| | ||||||||| || |||| |||||||||| |||||||||||| ||||| |||| ||||||||||    
T  29801958 ttaattacacttttgatcctcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtctttcaattatcatttttgttgc 29801859  T
Q  766 atttttcgtcctaccccccatttt-attttccaaaaacgtagagaaatgacagttttagac 825  Q
    ||||||||||| ||| || ||||| |   |||| ||||| |||||||||||| ||||||||    
T  29801858 atttttcgtcccacctcctattttcaaactccagaaacgcagagaaatgacaattttagac 29801798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 666 - 789
Target Start/End: Complemental strand, 51474876 - 51474753
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||||||||||||| ||||||||| | || | |||||| || ||||||| ||||||||||||||||||  |||||| |  |||| ||||||||||    
T  51474876 ttaattacacttttggttcccgtgttttggcatactcacgaaattggtcatgcccttttaaaacataacaaaattgtcctttagttatcatttttgttgc 51474777  T
Q  766 atttttcgtcctaccccccatttt 789  Q
    |||||||||||||||||| |||||    
T  51474776 atttttcgtcctacccccaatttt 51474753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 659 - 823
Target Start/End: Original strand, 24300553 - 24300717
Alignment:
Q  659 aaaaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatctttt 758  Q
    |||||||||||||||| ||||||| ||||||||||| | |||| ||||||||| || || | |||||||||| || |||||||| |||||| |||| |||    
T  24300553 aaaaggtttaattacatttttggt-ctcgtgttttggcttattcacgaaactggtcctgtccttttaaaacagaataaaacggttcttcaattatcattt 24300651  T
Q  759 ttgttgcatttttcgtcctaccccccatttt-attttccaaaaacgtagagaaatgacagttttag 823  Q
    |||||||| ||||||||| ||| || ||||| |   |||| ||||| |||||||||||||||||||    
T  24300652 ttgttgcaattttcgtcccacctcctattttcaaactccagaaacgcagagaaatgacagttttag 24300717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 658 - 789
Target Start/End: Original strand, 26274562 - 26274693
Alignment:
Q  658 taaaaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttt 757  Q
    ||||||||||||||||| ||||| | || || |||||  ||| | ||||||||| || |||| |||||||||| |||||||||||||||||| |||| ||    
T  26274562 taaaaggtttaattacatttttgatccttgtattttggactactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 26274661  T
Q  758 tttgttgcatttttcgtcctaccccccatttt 789  Q
    |||||||||||||||||| |||| || |||||    
T  26274662 tttgttgcatttttcgtcatacctcctatttt 26274693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 666 - 823
Target Start/End: Complemental strand, 5137523 - 5137365
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||||||||||| ||||||||||| |||| | | ||||||| |  |||| |||||||| | ||||||| |||||||||| |||| ||||||||||    
T  5137523 ttaattacacttttggtcctcgtgttttggcctactcatgaaactggttctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgttgc 5137424  T
Q  766 atttttcgtcctaccccccatttt-attttccaaaaacgtagagaaatgacagttttag 823  Q
    |||||| |||||| | || ||||| |   |||| ||||| |||||||||||||||||||    
T  5137423 atttttagtcctatctcctattttcaaactccagaaacgcagagaaatgacagttttag 5137365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 666 - 803
Target Start/End: Complemental strand, 50116951 - 50116814
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||||||||| | ||||||||||| | || | |||||| || ||||||| |||| ||| | |||||||||||| ||||  |||| ||||||||||    
T  50116951 ttaattacacttttgatcctcgtgttttgacttactcacgaaattggtcatgcccttttgaaagagaacaaaacggtcattcagttatcatttttgttgc 50116852  T
Q  766 atttttcgtcctaccccccattttattttccaaaaacg 803  Q
    | |||||||||||||||||||||| |  ||||||||||    
T  50116851 aattttcgtcctaccccccattttttcctccaaaaacg 50116814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 666 - 789
Target Start/End: Complemental strand, 23645007 - 23644884
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||| ||||||||| ||||||||||| |||| | |||||| || || | || |||||||||| |||||||||||| ||||| |||| ||||||||||    
T  23645007 ttaattatacttttggtcctcgtgttttggcctactcacgaaattggtcctacccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 23644908  T
Q  766 atttttcgtcctaccccccatttt 789  Q
    ||||||| ||||||| || |||||    
T  23644907 atttttcatcctacctcctatttt 23644884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 666 - 804
Target Start/End: Complemental strand, 32697242 - 32697105
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||| | ||||||| ||||||||||  |||| | |||||| |  ||| ||| |||||||||| |||||||  || |||||| |||| ||||||||||    
T  32697242 ttaattatatttttggtcctcgtgttttagcctactcacgaaattagtcacgcccttttaaaacagaacaaaattgtgcttcaattatcatttttgttgc 32697143  T
Q  766 atttttcgtcctaccccccattttattttccaaaaacgt 804  Q
    |||||||||||||| |||||||||||  |||||||||||    
T  32697142 atttttcgtcctac-ccccattttatcctccaaaaacgt 32697105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 666 - 791
Target Start/End: Complemental strand, 25420683 - 25420558
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||||||||| |  |||| ||||| |||| | |||||| |||||| ||| |||||||| | || ||||  ||||||||| |||  ||||||||||    
T  25420683 ttaattacacttttgatcatcgtattttgacctactcacgaaattgatcacgcccttttaaaatagaataaaattgtccttcaattattatttttgttgc 25420584  T
Q  766 atttttcgtcctaccccccattttat 791  Q
    |||||||||| |||||||||||||||    
T  25420583 atttttcgtcataccccccattttat 25420558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 666 - 803
Target Start/End: Original strand, 37220560 - 37220697
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||||||||||| ||||| ||||| |||| | || | |  ||||||||  |||||||||| || ||||  ||||||||  |||| ||||||||||    
T  37220560 ttaattacacttttggtcctcgtattttggcctactcacaatatcgatcatgctcttttaaaacagaataaaattgtccttcagttatcatttttgttgc 37220659  T
Q  766 atttttcgtcctaccccccattttattttccaaaaacg 803  Q
    | |||||||||||||| |||||||||  ||||||||||    
T  37220660 acttttcgtcctaccctccattttatcctccaaaaacg 37220697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 666 - 789
Target Start/End: Original strand, 45965941 - 45966064
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||||||||||| ||||||||||| | || | |||||  | ||| |||  ||||||||||||||||||  ||||||| | |||| ||| ||||||    
T  45965941 ttaattacacttttggtcctcgtgttttggcatactcacgaagttaatcctgctcttttaaaacataacaaaaatgtccttcgattatcatttgtgttgc 45966040  T
Q  766 atttttcgtcctaccccccatttt 789  Q
    ||||||||| ||| ||||||||||    
T  45966041 atttttcgttctaacccccatttt 45966064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 660 - 823
Target Start/End: Complemental strand, 41047245 - 41047083
Alignment:
Q  660 aaaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttt 759  Q
    ||||||||||||||||||| |  | || ||||||| |||| | ||||||||| |  || | |||||||||| || |||||| |||||||| |||| ||||    
T  41047245 aaaggtttaattacactttcgtct-tcatgttttggcctactcacgaaactggttctgtccttttaaaacagaataaaacg-tccttcaattatcatttt 41047148  T
Q  760 tgttgcatttttcgtcctaccccccatttt-attttccaaaaacgtagagaaatgacagttttag 823  Q
    ||||||||||||||||||||| || ||||| |   |||| ||||| ||||||||| |||||||||    
T  41047147 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 41047083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 666 - 777
Target Start/End: Original strand, 51473431 - 51473542
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||||||||||| |||||||||||  ||||| |||||| || || |||| |||||||||| |||||||  |||||||   |||| ||||||||||    
T  51473431 ttaattacacttttggtcctcgtgttttggtctattcacgaaattggtcctgcccttttaaaacagaacaaaattgtccttcggttatcatttttgttgc 51473530  T
Q  766 atttttcgtcct 777  Q
    | |||| |||||    
T  51473531 acttttggtcct 51473542  T

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Target: chr3; HSP #48
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 666 - 749
Target Start/End: Complemental strand, 37222113 - 37222030
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaa 749  Q
    ||||||||||||||||| |||||||||||||||| | || ||| || || |||| |||||||||| ||||||||  ||||||||    
T  37222113 ttaattacacttttggtcctcgtgttttgccctactcacaaaattggtcctgccattttaaaacagaacaaaaccatccttcaa 37222030  T

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Target: chr3; HSP #49
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 664 - 790
Target Start/End: Original strand, 32695704 - 32695830
Alignment:
Q  664 gtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgtt 763  Q
    ||||||||||| ||||||| ||| | ||||| |||| |||||||| |||| ||| |||||||||||| |||||||  ||||| | | |||  ||||||||    
T  32695704 gtttaattacatttttggtcctcatattttggcctacttacgaaattgattatgtctttttaaaacagaacaaaattgtcctacgattattatttttgtt 32695803  T
Q  764 gcatttttcgtcctaccccccatttta 790  Q
    ||| |||| |||||  ||| |||||||    
T  32695804 gcaattttagtccttaccctcatttta 32695830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 794 - 840
Target Start/End: Original strand, 49407926 - 49407972
Alignment:
Q  794 tccaaaaacgtagagaaatgacagttttagacctaccccctatgcta 840  Q
    |||||||||| |||||||||||| |||||||||||||||||||||||    
T  49407926 tccaaaaacgcagagaaatgacaattttagacctaccccctatgcta 49407972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 794 - 839
Target Start/End: Original strand, 55192248 - 55192293
Alignment:
Q  794 tccaaaaacgtagagaaatgacagttttagacctaccccctatgct 839  Q
    |||| ||||| |||||||||||||||||||||||||||||||||||    
T  55192248 tccagaaacgcagagaaatgacagttttagacctaccccctatgct 55192293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 721 - 791
Target Start/End: Complemental strand, 18010232 - 18010162
Alignment:
Q  721 ttttaaaacataacaaaacggtccttcaagtatcttttttgttgcatttttcgtcctaccccccattttat 791  Q
    |||||||||| |||||||  ||  ||||| |||| |||||||||||||||||||||| ||| |||||||||    
T  18010232 ttttaaaacagaacaaaattgttattcaattatcatttttgttgcatttttcgtcctgccctccattttat 18010162  T

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Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 794 - 839
Target Start/End: Original strand, 37075819 - 37075864
Alignment:
Q  794 tccaaaaacgtagagaaatgacagttttagacctaccccctatgct 839  Q
    |||| ||||| ||||||||||| |||||||||||||||||||||||    
T  37075819 tccagaaacgcagagaaatgaccgttttagacctaccccctatgct 37075864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 779 - 839
Target Start/End: Original strand, 29801532 - 29801592
Alignment:
Q  779 ccccccattttattttccaaaaacgtagagaaatgacagttttagacctaccccctatgct 839  Q
    |||||||||||||| | |||||| | ||||||||||||||||||||| |||| | ||||||    
T  29801532 ccccccattttattcttcaaaaatgcagagaaatgacagttttagacatacctcatatgct 29801592  T

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Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 756 - 803
Target Start/End: Original strand, 23227349 - 23227396
Alignment:
Q  756 tttttgttgcatttttcgtcctaccccccattttattttccaaaaacg 803  Q
    |||||||||||||||||||||| | |||||||||||  ||||||||||    
T  23227349 tttttgttgcatttttcgtccttctccccattttatcctccaaaaacg 23227396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 794 - 839
Target Start/End: Complemental strand, 27200107 - 27200062
Alignment:
Q  794 tccaaaaacgtagagaaatgacagttttagacctaccccctatgct 839  Q
    |||| ||||| ||||||||||||| |||||||||||||| ||||||    
T  27200107 tccagaaacgcagagaaatgacaggtttagacctaccccttatgct 27200062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 136; Significance: 2e-70; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 136; E-Value: 2e-70
Query Start/End: Original strand, 660 - 839
Target Start/End: Original strand, 37786764 - 37786943
Alignment:
Q  660 aaaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttt 759  Q
    ||||| ||||||||||||||||| ||||||||||| |||| ||||||||||| || |||| ||||||||||||||||||||||||||||| |||| ||||    
T  37786764 aaaggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacataacaaaacggtccttcaattatcatttt 37786863  T
Q  760 tgttgcatttttcgtcctaccccccattttattttccaaaaacgtagagaaatgacagttttagacctaccccctatgct 839  Q
    ||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||    
T  37786864 tgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 37786943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 130; E-Value: 6e-67
Query Start/End: Original strand, 662 - 839
Target Start/End: Original strand, 19830419 - 19830596
Alignment:
Q  662 aggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttg 761  Q
    ||||||||||||||||||||| ||||||||||| |||| | ||||||||| || |||| |||||||||| |||||||||||||||||| |||| ||||||    
T  19830419 aggtttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 19830518  T
Q  762 ttgcatttttcgtcctaccccccattttattttccaaaaacgtagagaaatgacagttttagacctaccccctatgct 839  Q
    ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||    
T  19830519 ttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 19830596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 118; E-Value: 9e-60
Query Start/End: Original strand, 666 - 839
Target Start/End: Original strand, 19590528 - 19590701
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||||||||||| ||||||||||| |||| | ||||||||| || |||| |||||||||| |||||||||||||||||| |||| ||||||||||    
T  19590528 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 19590627  T
Q  766 atttttcgtcctaccccccattttattttccaaaaacgtagagaaatgacagttttagacctaccccctatgct 839  Q
    ||||||| ||||||||||||||||||| |||||||||  |||||||||||||||||||||||||||||||||||    
T  19590628 atttttcatcctaccccccattttattctccaaaaacccagagaaatgacagttttagacctaccccctatgct 19590701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 666 - 837
Target Start/End: Complemental strand, 34534333 - 34534162
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||| ||||||||||||||||||||| |||| | |||||||||||| ||||  ||||||||| |||||||||||||||||| |||| ||||||||||    
T  34534333 ttaattatacttttggttctcgtgttttggcctactcacgaaactgatcctgcccatttaaaacagaacaaaacggtccttcaattatcatttttgttgc 34534234  T
Q  766 atttttcgtcctaccccccattttattttccaaaaacgtagagaaatgacagttttagacctaccccctatg 837  Q
    ||||||||||||||||||||||||||| ||||||||   |||||||||||||||||||||||||| ||||||    
T  34534233 atttttcgtcctaccccccattttattctccaaaaaaacagagaaatgacagttttagacctaccacctatg 34534162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 659 - 839
Target Start/End: Complemental strand, 29100400 - 29100220
Alignment:
Q  659 aaaaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatctttt 758  Q
    |||||||||||||||||||||||| |||||||||||  ||| | || ||| || || |||| |||||||||| |||||||||||| ||||| |||| |||    
T  29100400 aaaaggtttaattacacttttggtcctcgtgttttggtctactcacaaaattggtcctgcccttttaaaacagaacaaaacggtctttcaattatcattt 29100301  T
Q  759 ttgttgcatttttcgtcctaccccccattttattttccaaaaacgtagagaaatgacagttttagacctaccccctatgct 839  Q
    ||||||||||||| |||||||||||||||||||| |||||||||| |||||||| ||||||||||||||||||||||||||    
T  29100300 ttgttgcattttttgtcctaccccccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 29100220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 108; E-Value: 9e-54
Query Start/End: Original strand, 666 - 837
Target Start/End: Complemental strand, 2659382 - 2659211
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||| ||||||| |||| |||||| |||||| | ||||||| || |||| |||||||||| |||||||||||| ||||| |||| ||||||||||    
T  2659382 ttaattacaattttggtcctcgcgttttggcctattcatgaaactggtcttgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 2659283  T
Q  766 atttttcgtcctaccccccattttattttccaaaaacgtagagaaatgacagttttagacctaccccctatg 837  Q
    ||||||| ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||    
T  2659282 atttttcatcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatg 2659211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 108; E-Value: 9e-54
Query Start/End: Original strand, 666 - 837
Target Start/End: Complemental strand, 32005156 - 32004985
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||||||||||| ||| ||||||| | || | ||||||||| ||||||| |||||||| | ||||||||||||||| || |||| ||||||||||    
T  32005156 ttaattacacttttggtcctcatgttttggcatactcacgaaactggtcatgcccttttaaaatagaacaaaacggtcctttaattatcatttttgttgc 32005057  T
Q  766 atttttcgtcctaccccccattttattttccaaaaacgtagagaaatgacagttttagacctaccccctatg 837  Q
    |||||||||||||| |||||||||||| |||||||||| |||||||||||||||||||||||||||||||||    
T  32005056 atttttcgtcctactccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatg 32004985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 661 - 839
Target Start/End: Original strand, 4641438 - 4641616
Alignment:
Q  661 aaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatctttttt 760  Q
    |||||||||||||||||||||| ||||||||||| | || | ||||||||| || |||  |||| |||||||||||||||||| ||||| |||| |||||    
T  4641438 aaggtttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgctcttttgaaacataacaaaacggtcattcaattatcattttt 4641537  T
Q  761 gttgcatttttcgtcctaccccccattttattttccaaaaacgtagagaaatgacagttttagacctaccccctatgct 839  Q
    |||||||||||||||||||||||||||||||| |||||||| | |||||||||| |||||||||||| |||||||||||    
T  4641538 gttgcatttttcgtcctaccccccattttattctccaaaaatgcagagaaatgatagttttagacctgccccctatgct 4641616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 660 - 839
Target Start/End: Original strand, 38858640 - 38858819
Alignment:
Q  660 aaaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttt 759  Q
    ||||| ||||| ||||||||||| ||||||||||| | || | ||||||||| || |||  |||||||||| |||||||||||| ||||| |||| ||||    
T  38858640 aaaggcttaataacacttttggtcctcgtgttttggcatactcacgaaactggtcctgctcttttaaaacagaacaaaacggtcattcaattatcatttt 38858739  T
Q  760 tgttgcatttttcgtcctaccccccattttattttccaaaaacgtagagaaatgacagttttagacctaccccctatgct 839  Q
    |||||||||||| |||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||| |||||||    
T  38858740 tgttgcatttttggtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctacccactatgct 38858819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 666 - 837
Target Start/End: Complemental strand, 35289443 - 35289272
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||||||||| | ||||||||||| |||| | ||||||||| || |||| |||||||||| |||||||||||||||||| |||| |||| |||||    
T  35289443 ttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttggttgc 35289344  T
Q  766 atttttcgtcctaccccccattttattttccaaaaacgtagagaaatgacagttttagacctaccccctatg 837  Q
    |||||||||| |||||||||||||||| || ||||||| |||||||| | ||||||||||||||||||||||    
T  35289343 atttttcgtcataccccccattttattctctaaaaacgcagagaaataatagttttagacctaccccctatg 35289272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 669 - 832
Target Start/End: Complemental strand, 23953268 - 23953105
Alignment:
Q  669 attacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgcatt 768  Q
    |||||| ||||||| |||||||||||  ||| | ||||||||| ||  ||| ||| |||||| |||||||||||||||||| |||| |||||||||||||    
T  23953268 attacatttttggtcctcgtgttttgatctactcacgaaactggtcccgccctttcaaaacagaacaaaacggtccttcaattatcatttttgttgcatt 23953169  T
Q  769 tttcgtcctaccccccattttattttccaaaaacgtagagaaatgacagttttagacctacccc 832  Q
    ||||||| |||||||||||||||| |||||||||| |||||||| |||||||||||| ||||||    
T  23953168 tttcgtcataccccccattttattctccaaaaacgcagagaaataacagttttagacatacccc 23953105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 662 - 832
Target Start/End: Complemental strand, 4478246 - 4478076
Alignment:
Q  662 aggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttg 761  Q
    |||||||| |||||||||| | ||||||||||| |||| | ||||||||| || |||| |||||||||| || || |  ||||||||| |||| ||||||    
T  4478246 aggtttaagtacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaataacattgtccttcaattatcatttttg 4478147  T
Q  762 ttgcatttttcgtcctaccccccattttattttccaaaaacgtagagaaatgacagttttagacctacccc 832  Q
    |||||||||||||| || ||| ||||||||| |||||||||| |||||||| |||||||||||||||||||    
T  4478146 ttgcatttttcgtcttatccctcattttattctccaaaaacgcagagaaataacagttttagacctacccc 4478076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 666 - 823
Target Start/End: Complemental strand, 19591067 - 19590909
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||||||||||| ||||||||||| |||| | ||||||||| || |||| |||||||||| |||||||||||||||||| |||| ||||||||||    
T  19591067 ttaattacacttttggtactcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 19590968  T
Q  766 atttttcgtcctaccccccatttt-attttccaaaaacgtagagaaatgacagttttag 823  Q
    ||||||||||||||| || ||||| |   |||| ||||| |||||||||||||||||||    
T  19590967 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 19590909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 666 - 822
Target Start/End: Original strand, 32004617 - 32004774
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||||||||||| ||||||||||| |||| | |||||| ||||| |||| |||||||||| ||||||| |||||||||| |||| ||||||||||    
T  32004617 ttaattacacttttggtcctcgtgttttggcctactcacgaaattgatcctgcccttttaaaacagaacaaaatggtccttcaattatcatttttgttgc 32004716  T
Q  766 atttttcgtcctaccccccatttt-attttccaaaaacgtagagaaatgacagtttta 822  Q
    |||||||| |||||| || ||||| |   |||| ||||| ||||||||||||||||||    
T  32004717 atttttcgccctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 32004774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 676 - 823
Target Start/End: Original strand, 29099863 - 29100011
Alignment:
Q  676 ttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgcatttttcgtc 775  Q
    ||||||| ||||||||||| |||| | |||||||||||| |||| |||||||||| |||||||||||||||||| |||| ||||||||||||||||||||    
T  29099863 ttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtc 29099962  T
Q  776 ctaccccccatttt-attttccaaaaacgtagagaaatgacagttttag 823  Q
    ||||| || ||||| |    ||| ||||||||| |||||||||||||||    
T  29099963 ctacctcctattttcaaaccccagaaacgtagataaatgacagttttag 29100011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 666 - 823
Target Start/End: Complemental strand, 38859183 - 38859025
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||||||||||| ||||||||||| |||| | |||||| || || |||| |||||||||| |||||||||||||||| | |||| ||||||||||    
T  38859183 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttccattatcatttttgttgc 38859084  T
Q  766 atttttcgtcctaccccccatttt-attttccaaaaacgtagagaaatgacagttttag 823  Q
    ||||||||||||||| || ||||| |   |||| ||||| |||||||||| ||||||||    
T  38859083 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgatagttttag 38859025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 666 - 780
Target Start/End: Original strand, 23952733 - 23952848
Alignment:
Q  666 ttaattacacttttggttctcgtgttttg-ccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttg 764  Q
    ||||||||||||||||| ||||||||||| ||||| | |||||| || ||||||| |||||||||| |||||||||||||||||| |||| |||| ||||    
T  23952733 ttaattacacttttggtcctcgtgttttgaccctactcacgaaattggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattttggttg 23952832  T
Q  765 catttttcgtcctacc 780  Q
    ||||||||||||||||    
T  23952833 catttttcgtcctacc 23952848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 666 - 823
Target Start/End: Original strand, 2658842 - 2659000
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    |||||||||||||| || ||||||||||| |||| | ||||||||| || |||| |||||||| | ||||||| |||||||||| |||| ||||||||||    
T  2658842 ttaattacactttttgtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgttgc 2658941  T
Q  766 atttttcgtcctaccccccatttt-attttccaaaaacgtagagaaatgacagttttag 823  Q
    |||||||||| |||| || ||||| |   |||||||||| ||||||||| |||||||||    
T  2658942 atttttcgtcatacctcctattttcaaactccaaaaacgcagagaaatggcagttttag 2659000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 666 - 823
Target Start/End: Original strand, 34533794 - 34533952
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||||||||||| ||||||||||| |||| | ||||||||| ||||||  |||||||||| || |||| |||| ||||| |||| ||||||||||    
T  34533794 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgctcttttaaaacagaataaaatggtcattcaattatcatttttgttgc 34533893  T
Q  766 atttttcgtcctaccccccatttt-attttccaaaaacgtagagaaatgacagttttag 823  Q
    ||||| ||||||||| || ||||| |   |||||||||| |||||||||||| ||||||    
T  34533894 attttccgtcctacctcctattttcaaactccaaaaacgcagagaaatgacacttttag 34533952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 666 - 803
Target Start/End: Complemental strand, 28584464 - 28584327
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    |||||||||||||| || |||||| |||| |||||| |||||| || ||||| | |||||||||| |||||||  ||||||||| |||| |||||||||     
T  28584464 ttaattacacttttcgtcctcgtgctttggcctattcacgaaattggtcatgtccttttaaaacagaacaaaattgtccttcaattatcatttttgttgt 28584365  T
Q  766 atttttcgtcctaccccccattttattttccaaaaacg 803  Q
    |||||||||| |||||||||||||||  ||||||||||    
T  28584364 atttttcgtcttaccccccattttatcctccaaaaacg 28584327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 666 - 803
Target Start/End: Original strand, 38160954 - 38161091
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||||||||||| |||| |||||| |||| | |||||| | ||| |||| |||||||||| |||||||  ||||||||| |||  ||||||||||    
T  38160954 ttaattacacttttggtcctcgggttttggcctactcacgaaaataatcctgcccttttaaaacagaacaaaattgtccttcaattattatttttgttgc 38161053  T
Q  766 atttttcgtcctaccccccattttattttccaaaaacg 803  Q
    |||||||||||||| |||||||||||  ||||||||||    
T  38161054 atttttcgtcctactccccattttatcctccaaaaacg 38161091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 660 - 823
Target Start/End: Complemental strand, 19830967 - 19830804
Alignment:
Q  660 aaaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttt 759  Q
    ||||| ||||||||||||||||| ||||||||||| |||| | || |||||| || || | |||||||||||||||||||||| |||||| |||| ||||    
T  19830967 aaaggcttaattacacttttggtcctcgtgttttggcctactcacaaaactggtcctgtccttttaaaacataacaaaacggtacttcaattatcatttt 19830868  T
Q  760 tgttgcatttttcgtcctaccccccatttt-attttccaaaaacgtagagaaatgacagttttag 823  Q
    |||||||||||| |||||||| || ||||| |   |||| ||||  |||||||||||||||||||    
T  19830867 tgttgcattttt-gtcctacctcctattttcaaactccagaaacacagagaaatgacagttttag 19830804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 666 - 821
Target Start/End: Complemental strand, 37787309 - 37787153
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||| ||||||||| ||||||||||| |||| | ||||||||| || |||  ||||||| || ||||||||||| |||||| |||| ||||||||||    
T  37787309 ttaattatacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaatcagaacaaaacggttcttcaattatcatttttgttgc 37787210  T
Q  766 atttttcgtcctaccccccatttt-attttccaaaaacgtagagaaatgacagtttt 821  Q
    ||||||||||||||| || ||||| |   |||| ||||| |||||||||||||||||    
T  37787209 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttt 37787153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 666 - 801
Target Start/End: Original strand, 28583442 - 28583577
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||||||||||| ||||||||||| |||| | | || | || |  |||| ||||||||||||| ||||| ||||||||| |||| ||||| ||||    
T  28583442 ttaattacacttttggtcctcgtgttttggcctactcatgagattggttctgcccttttaaaacataataaaactgtccttcaattatcatttttattgc 28583541  T
Q  766 atttttcgtcctaccccccattttattttccaaaaa 801  Q
    ||||||||||||||||||||||||||  ||||||||    
T  28583542 atttttcgtcctaccccccattttatcctccaaaaa 28583577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 666 - 779
Target Start/End: Original strand, 35288906 - 35289019
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    |||||||||||||||||  |||| ||||| |||| | ||||||||| || |||| |||||||||| ||||||| |||||||||| |||| ||||||||||    
T  35288906 ttaattacacttttggtcatcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaattatcatttttgttgc 35289005  T
Q  766 atttttcgtcctac 779  Q
    ||||||||||||||    
T  35289006 atttttcgtcctac 35289019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 666 - 823
Target Start/End: Complemental strand, 4641983 - 4641828
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||||||||||| ||||||||||| |||| | ||   |||| || || | |||||||||| |||||||||||||||||| |||| ||||||||||    
T  4641983 ttaattacacttttggtcctcgtgttttggcctactcac---actggtcctgtccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 4641887  T
Q  766 atttttcgtcctaccccccatttt-attttccaaaaacgtagagaaatgacagttttag 823  Q
    || |||||||||||  || ||||| |   || | ||||| |||||||||||||||||||    
T  4641886 atatttcgtcctacgtcctattttcaaactctagaaacgcagagaaatgacagttttag 4641828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 797 - 832
Target Start/End: Complemental strand, 32427432 - 32427397
Alignment:
Q  797 aaaaacgtagagaaatgacagttttagacctacccc 832  Q
    ||||||| ||||||||||||||||||||||||||||    
T  32427432 aaaaacgcagagaaatgacagttttagacctacccc 32427397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 797 - 839
Target Start/End: Complemental strand, 35579298 - 35579256
Alignment:
Q  797 aaaaacgtagagaaatgacagttttagacctaccccctatgct 839  Q
    ||||||| || ||||| ||||||||||||||||||||||||||    
T  35579298 aaaaacgcagggaaataacagttttagacctaccccctatgct 35579256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 794 - 839
Target Start/End: Original strand, 35579029 - 35579074
Alignment:
Q  794 tccaaaaacgtagagaaatgacagttttagacctaccccctatgct 839  Q
    |||| ||||| |||||||||||| ||||||||||| ||||||||||    
T  35579029 tccagaaacgcagagaaatgacatttttagacctatcccctatgct 35579074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 131; Significance: 2e-67; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 131; E-Value: 2e-67
Query Start/End: Original strand, 661 - 839
Target Start/End: Original strand, 33328156 - 33328334
Alignment:
Q  661 aaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatctttttt 760  Q
    |||||||||||||||||||||| ||||||||||| |||| | ||||||||||||||||| |||||||||| ||||||||||||||||||||||| |||||    
T  33328156 aaggtttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaacagaacaaaacggtccttcaagtatcattttt 33328255  T
Q  761 gttgcatttttcgtcctaccccccattttattttccaaaaacgtagagaaatgacagttttagacctaccccctatgct 839  Q
    ||||||||||||||||||||| | |||||||| |||||||||| | |||||||||||||||||||||||||||||||||    
T  33328256 gttgcatttttcgtcctaccctcgattttattctccaaaaacgcaaagaaatgacagttttagacctaccccctatgct 33328334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 122; E-Value: 4e-62
Query Start/End: Original strand, 666 - 839
Target Start/End: Original strand, 31133223 - 31133396
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||||||||||| |||||||||||||||| | ||||||||| ||  ||| |||||||||| |||||||| |||||||||||||| ||||||||||    
T  31133223 ttaattacacttttggtcctcgtgttttgccctactcacgaaactggtcccgcccttttaaaacaaaacaaaacagtccttcaagtatcatttttgttgc 31133322  T
Q  766 atttttcgtcctaccccccattttattttccaaaaacgtagagaaatgacagttttagacctaccccctatgct 839  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| | ||||||    
T  31133323 atttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacctcttatgct 31133396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 666 - 839
Target Start/End: Complemental strand, 19176832 - 19176659
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||||||||||| ||||||||||| |||| | ||| ||||| || |||| |||||||||| |||||||||||||||||| |||| ||||||||||    
T  19176832 ttaattacacttttggtcctcgtgttttggcctactcacgtaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 19176733  T
Q  766 atttttcgtcctaccccccattttattttccaaaaacgtagagaaatgacagttttagacctaccccctatgct 839  Q
    ||||||||||||||||||||||||||| |||||||||| ||| |||||||||||||||||||||| ||||||||    
T  19176732 atttttcgtcctaccccccattttattctccaaaaacgcagacaaatgacagttttagacctaccacctatgct 19176659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 108; E-Value: 9e-54
Query Start/End: Original strand, 660 - 839
Target Start/End: Complemental strand, 9930205 - 9930026
Alignment:
Q  660 aaaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttt 759  Q
    ||||| ||||||||||||||||| ||||| ||||| |||| | ||||||||| || |||| |||||||| | ||||||| |||||||||| |||| ||||    
T  9930205 aaaggcttaattacacttttggtcctcgtattttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaatggtccttcaactatcatttt 9930106  T
Q  760 tgttgcatttttcgtcctaccccccattttattttccaaaaacgtagagaaatgacagttttagacctaccccctatgct 839  Q
    ||||||||||||||||||||||||||||||||| ||||||| || |||||||||| ||||||||||||||||||||||||    
T  9930105 tgttgcatttttcgtcctaccccccattttattctccaaaagcgcagagaaatgatagttttagacctaccccctatgct 9930026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 666 - 839
Target Start/End: Original strand, 12571866 - 12572040
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||||||||||| ||||||||||| |||| | ||||||||| |  | || |||||||||| |||||||||||| ||||| |||| ||||||||||    
T  12571866 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggttctacccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 12571965  T
Q  766 atttttcgtcct-accccccattttattttccaaaaacgtagagaaatgacagttttagacctaccccctatgct 839  Q
    |||||||||||| ||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||    
T  12571966 atttttcgtcctaaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 12572040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 666 - 836
Target Start/End: Original strand, 41681137 - 41681306
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||||||||||| ||||||||||| |||| | ||||||||| || |||| |||||||||| |||||||||||||||||| |||| ||||||||||    
T  41681137 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 41681236  T
Q  766 atttttcgtcctaccccccattttattttccaaaaacgtagagaaatgacagttttagacctaccccctat 836  Q
    ||||||||||||| ||||||||||||| |||||||||| |||||||||||||||||| || ||||||||||    
T  41681237 atttttcgtccta-cccccattttattctccaaaaacgcagagaaatgacagttttaaacataccccctat 41681306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 666 - 839
Target Start/End: Complemental strand, 9178177 - 9178005
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||||||||||| ||||||||||| |||| | ||||||||||||||||| | |||||||| ||||||||||||||||||||||| ||||||||||    
T  9178177 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgccctcttaaaacagaacaaaacggtccttcaagtatcatttttgttgc 9178078  T
Q  766 atttttcgtcctaccccccattttattttccaaaaacgtagagaaatgacagttttagacctaccccctatgct 839  Q
    ||||||| || || ||||||||||||| || ||||||| |||||||||||| ||||||||||||| ||||||||    
T  9178077 atttttcatctta-cccccattttattctcaaaaaacgcagagaaatgacaattttagacctacctcctatgct 9178005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 666 - 837
Target Start/End: Original strand, 11656458 - 11656630
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||||||||||| ||||||||||| |||| | ||||||||| ||||||| |||||||||  |||||||||||||||||| || | ||||||||||    
T  11656458 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaactgaacaaaacggtccttcaattaccatttttgttgc 11656557  T
Q  766 atttttcgtcctaccccccattttattttcc-aaaaacgtagagaaatgacagttttagacctaccccctatg 837  Q
    ||||||||||||||||||||||||||| ||| ||||||| ||||||||| |||||||||||||||||| ||||    
T  11656558 atttttcgtcctaccccccattttattctccaaaaaacgcagagaaatggcagttttagacctaccccttatg 11656630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 667 - 839
Target Start/End: Original strand, 13224645 - 13224816
Alignment:
Q  667 taattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgca 766  Q
    ||||||||||||||||  |||||||||| |||| | ||||||||| || |||| |||||||||| ||||||||  |||||||| |||| ||||||||| |    
T  13224645 taattacacttttggtcttcgtgttttggcctactcacgaaactggtc-tgcccttttaaaacagaacaaaacaatccttcaattatcatttttgttgaa 13224743  T
Q  767 tttttcgtcctaccccccattttattttccaaaaacgtagagaaatgacagttttagacctaccccctatgct 839  Q
    |||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||    
T  13224744 tttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 13224816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 666 - 839
Target Start/End: Complemental strand, 44831787 - 44831614
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||| ||||||||||| ||||||||||| | || | ||||||||| || |||  |||||||||| |||||||||||  ||||| |||| ||||||||||    
T  44831787 ttaataacacttttggtcctcgtgttttggcatactcacgaaactggtcctgctcttttaaaacagaacaaaacggttattcaattatcatttttgttgc 44831688  T
Q  766 atttttcgtcctaccccccattttattttccaaaaacgtagagaaatgacagttttagacctaccccctatgct 839  Q
    |||||| |||||||||||||||||||| |||||||||  |||||||||||||||||||||||||||||||||||    
T  44831687 atttttggtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatgct 44831614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 716 - 837
Target Start/End: Complemental strand, 33743411 - 33743290
Alignment:
Q  716 tgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgcatttttcgtcctaccccccattttattttccaaaaacgtagagaaatgac 815  Q
    ||||||||||||||| |||||||||||  ||||| |||| ||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| ||    
T  33743411 tgcctttttaaaacagaacaaaacggtttttcaattatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaataac 33743312  T
Q  816 agttttagacctaccccctatg 837  Q
    |||||||||||||| |||||||    
T  33743311 agttttagacctactccctatg 33743290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 660 - 823
Target Start/End: Complemental strand, 13225187 - 13225023
Alignment:
Q  660 aaaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttt 759  Q
    ||||| ||||||||||||||||| ||||||||||| |||| | ||||||||| || |||| |||||||||| |||||||||||||||||| |||| ||||    
T  13225187 aaaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttt 13225088  T
Q  760 tgttgcatttttcgtcctaccccccatttt-attttccaaaaacgtagagaaatgacagttttag 823  Q
    ||||||||||||||||||||| || ||||| |   |||| ||||| ||||||||| |||||||||    
T  13225087 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 13225023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 664 - 839
Target Start/End: Complemental strand, 4630330 - 4630161
Alignment:
Q  664 gtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgtt 763  Q
    ||||||||||||||||| |  ||||||||||  ||| | |||||| || || ||| ||||||||||| || | ||||||||||||| |||      ||||    
T  4630330 gtttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgcatttttaaaacagaatacaacggtccttcaattat------tgtt 4630237  T
Q  764 gcatttttcgtcctaccccccattttattttccaaaaacgtagagaaatgacagttttagacctaccccctatgct 839  Q
    ||||||||| ||||||||||||||||||| |||||||||| ||| |||||||||||||||||||||||||||||||    
T  4630236 gcatttttcatcctaccccccattttattctccaaaaacgcagaaaaatgacagttttagacctaccccctatgct 4630161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 666 - 789
Target Start/End: Complemental strand, 31133762 - 31133639
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||||||||||| ||||||||||| |||| | |||||||||||| |||| |||||||||| |||||||||||||||||| |||  ||||||||||    
T  31133762 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattattatttttgttgc 31133663  T
Q  766 atttttcgtcctaccccccatttt 789  Q
    |||||||||| |||| || |||||    
T  31133662 atttttcgtcatacctcctatttt 31133639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 666 - 789
Target Start/End: Complemental strand, 34541090 - 34540967
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||||||||||| ||||||||||| |||| | ||||||||| || |||  |||||||||||||||||| |||||||||| |||| ||||||||||    
T  34541090 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacataacaaaatggtccttcaattatcatttttgttgc 34540991  T
Q  766 atttttcgtcctaccccccatttt 789  Q
    ||||||||||||||| || |||||    
T  34540990 atttttcgtcctacctcctatttt 34540967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 666 - 780
Target Start/End: Original strand, 9928912 - 9929026
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||||||||||| |||||||||||  ||| | ||||||||| || |||| |||||||||| |||||||||||||||||| |||| ||||||||||    
T  9928912 ttaattacacttttggtcctcgtgttttgatctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 9929011  T
Q  766 atttttcgtcctacc 780  Q
    |||||||||||||||    
T  9929012 atttttcgtcctacc 9929026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 663 - 789
Target Start/End: Complemental strand, 12572396 - 12572270
Alignment:
Q  663 ggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgt 762  Q
    |||||||||||||||||||| |||||||||||  ||| | ||||||||  ||||||  |||||||||| |||||||||||||||||| |||| |||||||    
T  12572396 ggtttaattacacttttggtcctcgtgttttggtctactcacgaaactagtcatgctcttttaaaacagaacaaaacggtccttcaattatcatttttgt 12572297  T
Q  763 tgcatttttcgtcctaccccccatttt 789  Q
    |||||||||||||||||| || |||||    
T  12572296 tgcatttttcgtcctacctcctatttt 12572270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 666 - 823
Target Start/End: Original strand, 19176293 - 19176451
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||||||||||| ||||||||||| |||| | ||||||||  || |||| |||||||||| |||||||||||||||||| |||| ||||||||||    
T  19176293 ttaattacacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 19176392  T
Q  766 atttttcgtcctaccccccatttt-attttccaaaaacgtagagaaatgacagttttag 823  Q
    ||||||||||| ||| || ||||| |   |||| ||||| |||||||||||| ||||||    
T  19176393 atttttcgtccgacctcctattttcaaactccagaaacgcagagaaatgacaattttag 19176451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 666 - 823
Target Start/End: Complemental strand, 33328682 - 33328524
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||| ||||||||| ||||||||||  |||| | ||||||||  ||||||  ||||||||||||||||||||||||||||| |||| ||||||||||    
T  33328682 ttaattagacttttggtcctcgtgttttagcctactcacgaaactagtcatgctcttttaaaacataacaaaacggtccttcaattatcatttttgttgc 33328583  T
Q  766 atttttcgtcctaccccccatttt-attttccaaaaacgtagagaaatgacagttttag 823  Q
    ||||||||||| ||| |||||||| |   |||| ||||| ||||||||| |||||||||    
T  33328582 atttttcgtcccacctcccattttcaaactccagaaacgcagagaaatggcagttttag 33328524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 666 - 780
Target Start/End: Complemental strand, 41681676 - 41681562
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||||||||||| ||||||||||| |||| | ||||||||| || | || |||||||||| |||||||||||||||||| |||| ||||||||||    
T  41681676 ttaattacacttttggtcctcgtgttttggcctaatcacgaaactggtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 41681577  T
Q  766 atttttcgtcctacc 780  Q
    |||||||||||||||    
T  41681576 atttttcgtcctacc 41681562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 661 - 823
Target Start/End: Original strand, 44831245 - 44831408
Alignment:
Q  661 aaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatctttttt 760  Q
    |||| ||||||||||||||||| ||| ||||||| |||| | |||||| || || |||| |||||||||| |||||||||||||||| | |||| |||||    
T  44831245 aaggcttaattacacttttggtcctcatgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttccattatcattttt 44831344  T
Q  761 gttgcatttttcgtcctaccccccatttt-attttccaaaaacgtagagaaatgacagttttag 823  Q
    |||||||||||||||||||| || ||||| |   |||| ||||| |||||||||| ||||||||    
T  44831345 gttgcatttttcgtcctacctcctattttcaaactccataaacgcagagaaatgatagttttag 44831408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 666 - 823
Target Start/End: Original strand, 33742925 - 33743082
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||||||||||| ||||||||||| |||| | ||||||||| || |||| |||||||||| ||| |||||||| ||||| |||| |||||| |||    
T  33742925 ttaattacacttttggtcctcgtgttttgacctactcacgaaactggtcttgcccttttaaaacagaac-aaacggtctttcaattatcatttttgatgc 33743023  T
Q  766 atttttcgtcctaccccccatttt-attttccaaaaacgtagagaaatgacagttttag 823  Q
    ||||||||||||||| || ||||| ||   ||| ||||| |||||||||||||||||||    
T  33743024 atttttcgtcctacctcctattttcataccccagaaacgcagagaaatgacagttttag 33743082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 660 - 789
Target Start/End: Complemental strand, 11657005 - 11656876
Alignment:
Q  660 aaaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttt 759  Q
    ||||| ||||||||||||||||| ||||||||||| |||| | ||||||||| ||  | | |||||||||| ||||||| |||||||||| |||| ||||    
T  11657005 aaaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcccggccttttaaaacagaacaaaatggtccttcaattatcatttt 11656906  T
Q  760 tgttgcatttttcgtcctaccccccatttt 789  Q
    ||||||||||||||||||||| || |||||    
T  11656905 tgttgcatttttcgtcctacctcctatttt 11656876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 666 - 789
Target Start/End: Original strand, 4629800 - 4629923
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    |||||| |||||||  ||||||||||||| | |||| ||||||||| || |||| |||||||| | |||||||||||| ||||| |||| ||||| ||||    
T  4629800 ttaattgcacttttaattctcgtgttttggcatattcacgaaactggtcctgcccttttaaaatagaacaaaacggtcattcaattatcatttttattgc 4629899  T
Q  766 atttttcgtcctaccccccatttt 789  Q
    |||||||||| |||| || |||||    
T  4629900 atttttcgtcttacctcctatttt 4629923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 662 - 801
Target Start/End: Original strand, 10918125 - 10918264
Alignment:
Q  662 aggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttg 761  Q
    ||||||||||||| |||| || |||||||||||  ||| | |||||| || || |||||  |||||||| | |||||  ||||||||| |||| ||||||    
T  10918125 aggtttaattacattttttgtcctcgtgttttgatctactcacgaaattggtcttgcctccttaaaacagagcaaaattgtccttcaaatatcatttttg 10918224  T
Q  762 ttgcatttttcgtcctaccccccattttattttccaaaaa 801  Q
    ||||||||||| || |||||||||||||||  ||||||||    
T  10918225 ttgcatttttcatcataccccccattttatcctccaaaaa 10918264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 661 - 803
Target Start/End: Complemental strand, 8074098 - 8073957
Alignment:
Q  661 aaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatctttttt 760  Q
    |||| ||| ||| ||||||||| ||||||||||| |||||| |||||| |||||||| | |||||||||| |||||||   |||||||| ||||  ||||    
T  8074098 aaggcttagttatacttttggtcctcgtgttttggcctattcacgaaaatgatcatgtccttttaaaacagaacaaaatcatccttcaattatc-atttt 8074000  T
Q  761 gttgcatttttcgtcctaccccccattttattttccaaaaacg 803  Q
    |||||||||| ||||  | |||||||||||   ||||||||||    
T  8073999 gttgcattttacgtcaaaacccccattttaccctccaaaaacg 8073957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 666 - 771
Target Start/End: Complemental strand, 11337064 - 11336959
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    |||||||||||||||||  |||||||||| | || | |||||| || ||  ||| |||||||||| || ||||||||| ||||| |||| ||||||||||    
T  11337064 ttaattacacttttggtcttcgtgttttggcttactcacgaaattggtcccgcccttttaaaacagaataaaacggtctttcaattatcatttttgttgc 11336965  T
Q  766 attttt 771  Q
    ||||||    
T  11336964 attttt 11336959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 742 - 803
Target Start/End: Original strand, 43958264 - 43958325
Alignment:
Q  742 tccttcaagtatcttttttgttgcatttttcgtcctaccccccattttattttccaaaaacg 803  Q
    |||||||| |||| |||||||||||||||||||||||||| | |||||||| ||||||||||    
T  43958264 tccttcaattatcatttttgttgcatttttcgtcctaccctctattttattctccaaaaacg 43958325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 532 - 650
Target Start/End: Complemental strand, 26159294 - 26159175
Alignment:
Q  532 aatacaaagaggaacataatcatgaacaaggtggctagcataagaattggc-ctccctagcgaagctatgagcaaccatatgctcttgtctgtaaataaa 630  Q
    ||||||| |||||||||||||||||||  ||||||||| ||||||||||||   ||||||| || |||||||| |||| || | |||||||    |||||    
T  26159294 aatacaaggaggaacataatcatgaacttggtggctagaataagaattggcaaaccctagctaaactatgagctaccaaattcgcttgtctccgtataaa 26159195  T
Q  631 ctttacctcaaagttacatt 650  Q
    ||| |||| |||||||||||    
T  26159194 cttcacctaaaagttacatt 26159175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 805 - 838
Target Start/End: Original strand, 18805304 - 18805337
Alignment:
Q  805 agagaaatgacagttttagacctaccccctatgc 838  Q
    ||||||||||||||||||||| ||||||||||||    
T  18805304 agagaaatgacagttttagacttaccccctatgc 18805337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 127; Significance: 4e-65; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 127; E-Value: 4e-65
Query Start/End: Original strand, 655 - 837
Target Start/End: Original strand, 11090513 - 11090695
Alignment:
Q  655 atttaaaaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatc 754  Q
    |||||| ||||||||||||||||||||| ||||||||||| |||| | ||||||||  || |||| |||||||||| |||||||||||||||||| ||||    
T  11090513 atttaataggtttaattacacttttggtcctcgtgttttggcctactcacgaaacttgtcctgcccttttaaaacagaacaaaacggtccttcaattatc 11090612  T
Q  755 ttttttgttgcatttttcgtcctaccccccattttattttccaaaaacgtagagaaatgacagttttagacctaccccctatg 837  Q
     ||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||    
T  11090613 atttttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatg 11090695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 122; E-Value: 4e-62
Query Start/End: Original strand, 662 - 839
Target Start/End: Complemental strand, 40815891 - 40815714
Alignment:
Q  662 aggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttg 761  Q
    ||||||||||||||||||||| ||||||||||| |||| | ||||||||| | ||||| |||||||||| |||||||||| ||||||| |||| ||||||    
T  40815891 aggtttaattacacttttggtcctcgtgttttggcctactcacgaaactggtaatgcccttttaaaacagaacaaaacggcccttcaattatcatttttg 40815792  T
Q  762 ttgcatttttcgtcctaccccccattttattttccaaaaacgtagagaaatgacagttttagacctaccccctatgct 839  Q
    ||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||| |||||||    
T  40815791 ttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccctctatgct 40815714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 661 - 839
Target Start/End: Original strand, 40027138 - 40027316
Alignment:
Q  661 aaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatctttttt 760  Q
    |||| |||||||||||||||||  |||||||||| |||| | ||||||||| ||||||| |||||||||| |||||||||||||||||| |||| |||||    
T  40027138 aaggcttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattttt 40027237  T
Q  761 gttgcatttttcgtcctaccccccattttattttccaaaaacgtagagaaatgacagttttagacctaccccctatgct 839  Q
    ||||||||||| ||||||||| |||||||||| |||||||||| |||||||||||||||||||||||||||||||||||    
T  40027238 gttgcattttttgtcctaccctccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 40027316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 118; E-Value: 9e-60
Query Start/End: Original strand, 663 - 836
Target Start/End: Original strand, 14432142 - 14432315
Alignment:
Q  663 ggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgt 762  Q
    |||||||||||||||||||| ||||||||||| |||| | | ||||||| || |||| |||||||| |||||||||||||||||||| |||| |||||||    
T  14432142 ggtttaattacacttttggtcctcgtgttttggcctactcatgaaactggtcttgcccttttaaaatataacaaaacggtccttcaactatcatttttgt 14432241  T
Q  763 tgcatttttcgtcctaccccccattttattttccaaaaacgtagagaaatgacagttttagacctaccccctat 836  Q
    ||||||||| |||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||    
T  14432242 tgcatttttggtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctat 14432315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 118; E-Value: 9e-60
Query Start/End: Original strand, 666 - 839
Target Start/End: Complemental strand, 18451373 - 18451200
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||||||||||| ||||||||||| |||| ||||||||||| || |||| |||||||||| |||||||  ||||||||| |||| ||||||||||    
T  18451373 ttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacagaacaaaatagtccttcaaatatcatttttgttgc 18451274  T
Q  766 atttttcgtcctaccccccattttattttccaaaaacgtagagaaatgacagttttagacctaccccctatgct 839  Q
    ||||||| ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||    
T  18451273 atttttcttcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 18451200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 118; E-Value: 9e-60
Query Start/End: Original strand, 666 - 839
Target Start/End: Original strand, 43058336 - 43058509
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||||||||| | ||||||||||| || | | || |||||| || ||||||||||||||| |||||||||||||||||| |||| ||||||||||    
T  43058336 ttaattacacttttgatcctcgtgttttggccaactcactaaactggtcctgcctttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 43058435  T
Q  766 atttttcgtcctaccccccattttattttccaaaaacgtagagaaatgacagttttagacctaccccctatgct 839  Q
    ||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  43058436 atttttcgttctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 43058509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 666 - 839
Target Start/End: Original strand, 239356 - 239528
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    |||||||||||||||||  |||||||||| |||| | ||||||||| || |||||||| |||||| |||||||||||||||||| |||| ||||||||||    
T  239356 ttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcctgcctttt-aaaacagaacaaaacggtccttcaattatcatttttgttgc 239454  T
Q  766 atttttcgtcctaccccccattttattttccaaaaacgtagagaaatgacagttttagacctaccccctatgct 839  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| ||||||||||    
T  239455 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctatcccctatgct 239528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 666 - 839
Target Start/End: Original strand, 22374323 - 22374496
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||||||||||| ||||||||||| |||| | ||||||||| ||||||| |||||||||| |||||||||||||||||| |||| ||||||||||    
T  22374323 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 22374422  T
Q  766 atttttcgtcctaccccccattttattttccaaaaacgtagagaaatgacagttttagacctaccccctatgct 839  Q
    ||||||||||||||||||||||||||| |||||||||| | |||||||| ||||||||||||| || |||||||    
T  22374423 atttttcgtcctaccccccattttattctccaaaaacgcaaagaaatgatagttttagacctaacctctatgct 22374496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 662 - 839
Target Start/End: Original strand, 3025465 - 3025641
Alignment:
Q  662 aggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttg 761  Q
    |||||| |||||| ||||||| ||||||||||| |||| | ||||||||| || |||  |||||||||| ||||||||||||||||||||||| ||||||    
T  3025465 aggtttgattacatttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacagaacaaaacggtccttcaagtatcatttttg 3025564  T
Q  762 ttgcatttttcgtcctaccccccattttattttccaaaaacgtagagaaatgacagttttagacctaccccctatgct 839  Q
    ||||||||||||||||| ||||||||||||| || ||||||| | |||||||||||||||||||||||||||||||||    
T  3025565 ttgcatttttcgtccta-cccccattttattctcaaaaaacgcaaagaaatgacagttttagacctaccccctatgct 3025641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 666 - 837
Target Start/End: Original strand, 28616616 - 28616788
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||||||||||| ||||||||||| |||| | ||||||||| || |||| |||||||||| |||||||||||||||||| |||| ||||||||||    
T  28616616 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 28616715  T
Q  766 atttttcgtcctaccccccattttattttcc-aaaaacgtagagaaatgacagttttagacctaccccctatg 837  Q
    | ||||||||||||||||||||||||| ||| ||||||| ||||||||  |||||||||||||||||||||||    
T  28616716 aattttcgtcctaccccccattttattatccaaaaaacgcagagaaatagcagttttagacctaccccctatg 28616788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 666 - 839
Target Start/End: Original strand, 1978111 - 1978284
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||| ||||||| || |||||||| |||| | ||||||||| || |||| |||||||||| |||||||||||||||||| |||| ||||||||||    
T  1978111 ttaattacatttttggtccttgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 1978210  T
Q  766 atttttcgtcctaccccccattttattttccaaaaacgtagagaaatgacagttttagacctaccccctatgct 839  Q
    |||||| |||||  ||||||||||||| |||||||||| |||||||||||||||||||||||||||| ||||||    
T  1978211 attttttgtcctgtcccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccatatgct 1978284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 661 - 839
Target Start/End: Original strand, 26538095 - 26538273
Alignment:
Q  661 aaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatctttttt 760  Q
    |||| ||||||||||||||||| ||||||||||| | || | ||||||||| |  |||| |||||||||| |||||| ||||||||||| |||| |||||    
T  26538095 aaggcttaattacacttttggtcctcgtgttttggcttactcacgaaactggttctgcccttttaaaacagaacaaagcggtccttcaattatcattttt 26538194  T
Q  761 gttgcatttttcgtcctaccccccattttattttccaaaaacgtagagaaatgacagttttagacctaccccctatgct 839  Q
    |||||||||||||||||||||||||||||||| |||||||||  |||||||| ||||||||||||||| || |||||||    
T  26538195 gttgcatttttcgtcctaccccccattttattctccaaaaacacagagaaataacagttttagacctatcctctatgct 26538273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 665 - 832
Target Start/End: Complemental strand, 8425903 - 8425736
Alignment:
Q  665 tttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttg 764  Q
    ||||||||||||||||||||| ||||||||  ||| | |||||| || || |||| |||||||| | |||||||| ||||||||| |||| |||||||||    
T  8425903 tttaattacacttttggttcttgtgttttggtctactcacgaaattggtcctgcccttttaaaatagaacaaaactgtccttcaattatcatttttgttg 8425804  T
Q  765 catttttcgtcctaccccccattttattttccaaaaacgtagagaaatgacagttttagacctacccc 832  Q
    ||||||||||| ||||||| |||||||| |||||||||| ||||||||||||||||||||||||||||    
T  8425803 catttttcgtcttacccccaattttattctccaaaaacgcagagaaatgacagttttagacctacccc 8425736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 666 - 832
Target Start/End: Complemental strand, 26538621 - 26538454
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||||||||||| ||||||||||| |||| | ||||||||| || |||| | |||||||| |||||||||||||||||| |||| ||||||||||    
T  26538621 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccctcttaaaacagaacaaaacggtccttcaattatcatttttgttgc 26538522  T
Q  766 atttttcgtcctaccccccatttt-attttccaaaaacgtagagaaatgacagttttagacctacccc 832  Q
    |||||||||||||||||||||||| |    ||| ||||| ||||||||||||||||||||||||||||    
T  26538521 atttttcgtcctaccccccattttcaaaccccagaaacgcagagaaatgacagttttagacctacccc 26538454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 666 - 823
Target Start/End: Original strand, 40815348 - 40815506
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||||||||||| ||||||||||| |||| | ||||||||| || |||| |||||||||||||||||||||| |||||| |||| ||||||||||    
T  40815348 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacataacaaaacggttcttcaattatcatttttgttgc 40815447  T
Q  766 atttttcgtcctacccccca-ttttattttccaaaaacgtagagaaatgacagttttag 823  Q
    ||||||||||||||| || | |||||   |||| ||||| |||||||||||||||||||    
T  40815448 atttttcgtcctacctcctatttttaaactccagaaacgcagagaaatgacagttttag 40815506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 660 - 803
Target Start/End: Original strand, 20444746 - 20444889
Alignment:
Q  660 aaaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttt 759  Q
    ||||| ||||||||||||||||| ||||||||||| || | | ||||||||| || |||| |||||||||| |||||||||||||||||  |||| ||||    
T  20444746 aaaggcttaattacacttttggtcctcgtgttttggccaactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcagttatcatttt 20444845  T
Q  760 tgttgcatttttcgtcctaccccccattttattttccaaaaacg 803  Q
    ||||||| ||||||||||||||||||||||||  ||||||||||    
T  20444846 tgttgcagttttcgtcctaccccccattttatcctccaaaaacg 20444889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 666 - 823
Target Start/End: Complemental strand, 7446888 - 7446730
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||| ||||| | ||||||||||||| || | ||||||||| || |||| |||||||||| |||||||||||||||||| |||| ||||||||||    
T  7446888 ttaattacatttttgatcctcgtgttttgccttactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 7446789  T
Q  766 atttttcgtcctaccccccatttt-attttccaaaaacgtagagaaatgacagttttag 823  Q
    ||||||||||||||| || ||||| |   |||||||||| |||||||||||||||||||    
T  7446788 atttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 7446730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 666 - 803
Target Start/End: Complemental strand, 35781205 - 35781068
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||||||||| | ||||||||||| |||| | |||||| || ||||||| |||||||||| ||||||||  |||||||| |||| ||||||||||    
T  35781205 ttaattacacttttgatcctcgtgttttggcctactcacgaaaatggtcatgcccttttaaaacagaacaaaactatccttcaattatcatttttgttgc 35781106  T
Q  766 atttttcgtcctaccccccattttattttccaaaaacg 803  Q
    ||||||||||||| ||||||||||||  ||||||||||    
T  35781105 atttttcgtcctaacccccattttatcctccaaaaacg 35781068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 660 - 789
Target Start/End: Complemental strand, 40027688 - 40027559
Alignment:
Q  660 aaaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttt 759  Q
    ||||||||||||||||||||||| ||||||||||| |||| | |||||| || || |||| |||||||||| |||||||||||| ||||| |||| ||||    
T  40027688 aaaggtttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtctttcaattatcatttt 40027589  T
Q  760 tgttgcatttttcgtcctaccccccatttt 789  Q
    ||||||||||||||||||||| || |||||    
T  40027588 tgttgcatttttcgtcctacctcctatttt 40027559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 661 - 837
Target Start/End: Original strand, 7446340 - 7446519
Alignment:
Q  661 aaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatctttttt 760  Q
    |||| ||||||||||||||| | |||||||||||  ||| | | |||| || || |||| |||||||||| |||||||||||| ||||| |||| |||||    
T  7446340 aaggcttaattacacttttgatcctcgtgttttggtctactcatgaaattggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 7446439  T
Q  761 gttgcatttttcgtcctaccccccattttattttccaaaaacgtagagaaatgacag----ttttagacctaccccctatg 837  Q
     |||||||||||||| || ||||||||||||| |||||||||| |||||||||||||    |||||||| |||||||||||    
T  7446440 attgcatttttcgtcata-cccccattttattctccaaaaacgcagagaaatgacagttaattttagacataccccctatg 7446519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 661 - 823
Target Start/End: Original strand, 18450828 - 18450991
Alignment:
Q  661 aaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatctttttt 760  Q
    |||| ||||||||||||||||| ||||||||||| |||| | ||||||||| ||  ||| |||||||||| |||||||||||||||||| |||| |||||    
T  18450828 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtccagcccttttaaaacagaacaaaacggtccttcaattatcattttt 18450927  T
Q  761 gttgcatttttcgtcctaccccccatttt-attttccaaaaacgtagagaaatgacagttttag 823  Q
     |||||||||| |||||||| || ||||| |   |||| ||||| |||||||||||||||||||    
T  18450928 tttgcatttttagtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 18450991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 666 - 789
Target Start/End: Complemental strand, 22374867 - 22374744
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||||||||||| ||||||||||| |||| | |||||| || || |||| |||||||||| |||||||||||||||||| |||| ||||||||||    
T  22374867 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 22374768  T
Q  766 atttttcgtcctaccccccatttt 789  Q
    ||||||||||||||| || |||||    
T  22374767 atttttcgtcctacctcctatttt 22374744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 666 - 803
Target Start/End: Original strand, 35779711 - 35779848
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||||||||||| ||||||||||| | || | |||||| || || |||| |||||||||| |||||||  ||||||||| |||| ||||||||||    
T  35779711 ttaattacacttttggtcctcgtgttttgacatactcacgaaaatggtcctgccattttaaaacagaacaaaattgtccttcaattatcatttttgttgc 35779810  T
Q  766 atttttcgtcctaccccccattttattttccaaaaacg 803  Q
    |||||| |||||||||||||||||||  ||||||||||    
T  35779811 attttttgtcctaccccccattttatcctccaaaaacg 35779848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 666 - 778
Target Start/End: Complemental strand, 11091062 - 11090950
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||||||||||| ||||||||||| |||| | ||||||||| ||||||| |||||||||| |||||||||||||||||| |||| || ||||||     
T  11091062 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattattgttgt 11090963  T
Q  766 atttttcgtccta 778  Q
    |||||||||||||    
T  11090962 atttttcgtccta 11090950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 666 - 803
Target Start/End: Original strand, 15551502 - 15551639
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||||||||||| |||||||||||   || | |||||| || |||||||||||||||||| |||||||  ||||||||  |||| ||||||||||    
T  15551502 ttaattacacttttggtcctcgtgttttggtttactcacgaaaatggtcatgcctttttaaaacaaaacaaaaatgtccttcagttatcatttttgttgc 15551601  T
Q  766 atttttcgtcctaccccccattttattttccaaaaacg 803  Q
    ||||||||||| |||| |||||||||  ||||||||||    
T  15551602 atttttcgtccaaccctccattttatcctccaaaaacg 15551639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 666 - 788
Target Start/End: Complemental strand, 20440573 - 20440451
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||||||||||| ||||||||||| || | | ||||||||| || |||| |||||||||| |||||||||||| ||||  |||| ||||||||||    
T  20440573 ttaattacacttttggtcctcgtgttttggccaactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcagttatcatttttgttgc 20440474  T
Q  766 atttttcgtcctaccccccattt 788  Q
    | ||||||||||| |||||||||    
T  20440473 agttttcgtcctatcccccattt 20440451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 666 - 780
Target Start/End: Complemental strand, 28847237 - 28847123
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||| ||||||| |||||||||||  ||| | ||||||||| || |||  |||||||||| |||||||||||||||||| |||| ||||||||||    
T  28847237 ttaattacatttttggtcctcgtgttttggtctactcacgaaactggtcctgctcttttaaaacaaaacaaaacggtccttcaattatcatttttgttgc 28847138  T
Q  766 atttttcgtcctacc 780  Q
    |||||||||||||||    
T  28847137 atttttcgtcctacc 28847123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 661 - 789
Target Start/End: Complemental strand, 28617161 - 28617033
Alignment:
Q  661 aaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatctttttt 760  Q
    |||| ||||||||||||||||| ||||||||||| |||| | ||||||||| |  || | |||||||||| ||||||| |||||||||| |||| |||||    
T  28617161 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggttctgtccttttaaaacagaacaaaatggtccttcaattatcattttt 28617062  T
Q  761 gttgcatttttcgtcctaccccccatttt 789  Q
    ||||||||||||||| |||| || |||||    
T  28617061 gttgcatttttcgtcttacctcctatttt 28617033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 666 - 789
Target Start/End: Complemental strand, 1978651 - 1978528
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||||||||||| || |||||||| |||| | |||||| || || |||| |||||||||| |||||||| ||||||||| |||| ||||||||||    
T  1978651 ttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacagtccttcaattatcatttttgttgc 1978552  T
Q  766 atttttcgtcctaccccccatttt 789  Q
    |||||| |||||||| || |||||    
T  1978551 attttttgtcctacctcctatttt 1978528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 670 - 823
Target Start/End: Complemental strand, 239890 - 239736
Alignment:
Q  670 ttacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgcattt 769  Q
    ||||||||||||| ||||||||||| |||| | |||||| || || |||| |||||||||| ||||||| |||||||||| |||| |||||||||| |||    
T  239890 ttacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaatggtccttcaattatcatttttgttgcgttt 239791  T
Q  770 ttcgtcctaccccccatttt-attttccaaaaacgtagagaaatgacagttttag 823  Q
    |||||| |||| || ||||| |   |||| ||||| ||||||||| |||||||||    
T  239790 ttcgtcatacctcctattttcaaactccagaaacgcagagaaatggcagttttag 239736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 665 - 822
Target Start/End: Original strand, 8425357 - 8425514
Alignment:
Q  665 tttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttg 764  Q
    |||||||||||||||||| || |||||||| |||| | |||||| || || | ||||||||||||| ||||||||||| |||||| |||| ||| |||||    
T  8425357 tttaattacacttttggtccttgtgttttggcctactcacgaaattggtcttacctttttaaaacagaacaaaacggt-cttcaattatcatttgtgttg 8425455  T
Q  765 catttttcgtcctaccccccatttt-attttccaaaaacgtagagaaatgacagtttta 822  Q
    |||||||||||||||| || ||||| |   |||| ||| | ||||||||||||||||||    
T  8425456 catttttcgtcctacctcctattttcaaactccagaaatgcagagaaatgacagtttta 8425514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 666 - 823
Target Start/End: Complemental strand, 43058874 - 43058717
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||||||||| | ||||||||||| |||| | ||||||||| || |||  |||||||||| ||||||| |||||||||| ||||  |||||||||    
T  43058874 ttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacagaacaaaatggtccttcaattatc-attttgttgc 43058776  T
Q  766 atttttcgtcctaccccccatttt-attttccaaaaacgtagagaaatgacagttttag 823  Q
    ||||||||||||||| || ||||| |   |||| ||||| ||||||||| |||||||||    
T  43058775 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 43058717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 666 - 803
Target Start/End: Original strand, 8972240 - 8972377
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||||||||||| ||||||||||| | |  | |||||| || ||||||| ||| |||||| |||||||  ||| ||||| |||| ||||||||||    
T  8972240 ttaattacacttttggtcctcgtgttttggcatgctcacgaaaatggtcatgccctttcaaaacagaacaaaattgtcattcaattatcatttttgttgc 8972339  T
Q  766 atttttcgtcctaccccccattttattttccaaaaacg 803  Q
    ||||||||| |||||||| |||||||  ||||||||||    
T  8972340 atttttcgttctaccccctattttatcctccaaaaacg 8972377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 666 - 823
Target Start/End: Complemental strand, 14432683 - 14432525
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||| ||||||| ||||||||||| |||| | | ||||||| ||||||| |||||||||| || |||| ||| |||||| |||  ||||||||||    
T  14432683 ttaattacatttttggtcctcgtgttttggcctactcatgaaactggtcatgccattttaaaacagaataaaatggttcttcaattattatttttgttgc 14432584  T
Q  766 atttttcgtcctaccccccatttt-attttccaaaaacgtagagaaatgacagttttag 823  Q
    ||||||| ||||||| || ||||| |   || | ||||| |||||||||||||||||||    
T  14432583 atttttcatcctacctcctattttcaaactctagaaacgcagagaaatgacagttttag 14432525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 666 - 822
Target Start/End: Complemental strand, 3026003 - 3025848
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||| ||||||| ||||||||||| | || | |||||| || |  |||| |||||||||| |||||||||||||||||| |||  ||||||||||    
T  3026003 ttaattaca-ttttggtcctcgtgttttggcttactcacgaaattggttctgcccttttaaaaca-aacaaaacggtccttcaattattatttttgttgc 3025906  T
Q  766 atttttcgtcctaccccccatttt-attttccaaaaacgtagagaaatgacagtttta 822  Q
    ||||||||||||||| || ||||| |   |||| ||| | ||||||||||||||||||    
T  3025905 atttttcgtcctacctcctattttcaaactccagaaatgcagagaaatgacagtttta 3025848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 387 - 473
Target Start/End: Complemental strand, 9363293 - 9363209
Alignment:
Q  387 taacaaagtgttgaaaaatggcctatatgttgttaaggtgtaaaaaatgttgaaaaaatttataattaatgtgtgattttgtatgta 473  Q
    |||||||||||||| ||||||| ||||||| |||||| |||||||| |||||||| ||||||||||   ||||||||||||||||||    
T  9363293 taacaaagtgttgagaaatggcttatatgtcgttaagttgtaaaaagtgttgaaacaatttataat--ctgtgtgattttgtatgta 9363209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 211 - 305
Target Start/End: Complemental strand, 9363454 - 9363367
Alignment:
Q  211 ctcagagccagaatagaatattgaagatgaagaaaaaagaaattgaagatcggataccagatgtacgtgtcttcttttcttcccttttatttggt 305  Q
    |||| |||||||||||||||| | ||||||||||||| ||||||||||       ||||||||||| |||||||||||||| |||||||||||||    
T  9363454 ctcaaagccagaatagaatatggtagatgaagaaaaaggaaattgaag-------accagatgtacatgtcttcttttctttccttttatttggt 9363367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 666 - 789
Target Start/End: Complemental strand, 15552595 - 15552473
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    |||||||||||||||||  |  ||||||| |||| | |||||| |||||  ||| |||||||||| |||||||  ||| ||||| |||| |||||||||     
T  15552595 ttaattacacttttggtcataatgttttggcctactcacgaaaatgatcc-gcccttttaaaacagaacaaaattgtcattcaattatcatttttgttgt 15552497  T
Q  766 atttttcgtcctaccccccatttt 789  Q
    |||||||||||||||| |||||||    
T  15552496 atttttcgtcctaccctccatttt 15552473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 794 - 839
Target Start/End: Complemental strand, 28143445 - 28143400
Alignment:
Q  794 tccaaaaacgtagagaaatgacagttttagacctaccccctatgct 839  Q
    |||| ||||| |||||||||||||||||||||||||||||||||||    
T  28143445 tccagaaacgcagagaaatgacagttttagacctaccccctatgct 28143400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 158 - 204
Target Start/End: Original strand, 9295291 - 9295337
Alignment:
Q  158 taaagaaagaatcttggtatgaattgttttgtttccattcattgttt 204  Q
    |||||||||||| ||||||||||||| ||| ||||||||||||||||    
T  9295291 taaagaaagaattttggtatgaattgctttttttccattcattgttt 9295337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295 (Bit Score: 126; Significance: 2e-64; HSPs: 2)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 126; E-Value: 2e-64
Query Start/End: Original strand, 666 - 839
Target Start/End: Original strand, 4796 - 4969
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||||||||||| ||||||||||| |||| | ||||||||| ||||||| |||||||||| |||||||||||||||||| |||| ||||||||||    
T  4796 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 4895  T
Q  766 atttttcgtcctaccccccattttattttccaaaaacgtagagaaatgacagttttagacctaccccctatgct 839  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||| ||||||||||||||||||||||||||    
T  4896 atttttcgtcctaccccccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 4969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295; HSP #2
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 666 - 777
Target Start/End: Complemental strand, 5333 - 5222
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||||||||||| ||||||||||| |||| | ||||||||| || || | |||||||||| || ||||||||  ||||| |||| ||||||||||    
T  5333 ttaattacacttttggtcctcgtgttttggcctagtcacgaaactggtcttgtccttttaaaacagaataaaacggtaattcaattatcatttttgttgc 5234  T
Q  766 atttttcgtcct 777  Q
    ||||||||||||    
T  5233 atttttcgtcct 5222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 126; Significance: 2e-64; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 126; E-Value: 2e-64
Query Start/End: Original strand, 666 - 839
Target Start/End: Complemental strand, 10900472 - 10900299
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||||||||||| ||||| ||||| |||| | ||||||||| ||||||| |||||||||| |||||||||||||||||| |||| ||||||||||    
T  10900472 ttaattacacttttggtcctcgtattttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 10900373  T
Q  766 atttttcgtcctaccccccattttattttccaaaaacgtagagaaatgacagttttagacctaccccctatgct 839  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||    
T  10900372 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 10900299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 123; E-Value: 1e-62
Query Start/End: Original strand, 661 - 839
Target Start/End: Complemental strand, 15828188 - 15828010
Alignment:
Q  661 aaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatctttttt 760  Q
    |||| ||||||||||||||||| ||||||||||| |||| | ||||||||| |||| || |||||||||| |||||||||||||||||| |||| |||||    
T  15828188 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatacccttttaaaacaaaacaaaacggtccttcaattatcattttt 15828089  T
Q  761 gttgcatttttcgtcctaccccccattttattttccaaaaacgtagagaaatgacagttttagacctaccccctatgct 839  Q
    |||||||||||||||||||||||||||||||| |||||||||| |||||||| ||||||||||||||||||||||||||    
T  15828088 gttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 15828010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 122; E-Value: 4e-62
Query Start/End: Original strand, 666 - 839
Target Start/End: Original strand, 20741103 - 20741276
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||||||||||| ||||||||||| |||| | ||||||||| || |||| |||||||||| ||||||| |||||||||| |||| ||||||||||    
T  20741103 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaaatatcatttttgttgc 20741202  T
Q  766 atttttcgtcctaccccccattttattttccaaaaacgtagagaaatgacagttttagacctaccccctatgct 839  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||    
T  20741203 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 20741276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 118; E-Value: 9e-60
Query Start/End: Original strand, 666 - 839
Target Start/End: Complemental strand, 11277124 - 11276951
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||||||||||| ||||||||||| | || | ||||||||| || |||| |||||||||| ||||||||||| |||||| |||| ||||||||||    
T  11277124 ttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgcccttttaaaacagaacaaaacggttcttcaattatcatttttgttgc 11277025  T
Q  766 atttttcgtcctaccccccattttattttccaaaaacgtagagaaatgacagttttagacctaccccctatgct 839  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||    
T  11277024 atttttcgtcctaccccccattttattctccaaaaacgaagagaaatgacagttttagacctaccccctatgct 11276951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 666 - 839
Target Start/End: Original strand, 18257140 - 18257313
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||||||||||| ||||||||||| | || | ||||||||| || |||| |||||||||| |||||||||||||||||| |||| ||||||||||    
T  18257140 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 18257239  T
Q  766 atttttcgtcctaccccccattttattttccaaaaacgtagagaaatgacagttttagacctaccccctatgct 839  Q
    |||||||||| |||||||||||||||| |||||||||| ||||||||||||||||||||||||||| |||||||    
T  18257240 atttttcgtcataccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccctctatgct 18257313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 108; E-Value: 9e-54
Query Start/End: Original strand, 666 - 837
Target Start/End: Complemental strand, 12935699 - 12935528
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||||||||||| ||||||||||| | || | ||||||||| || ||||||| ||||||| |||||||||||||||||| |||| |||||||| |    
T  12935699 ttaattacacttttggtcctcgtgttttggcgtactcacgaaactggtcctgcctttataaaacagaacaaaacggtccttcaattatcatttttgttac 12935600  T
Q  766 atttttcgtcctaccccccattttattttccaaaaacgtagagaaatgacagttttagacctaccccctatg 837  Q
    ||||||||||||||||||||||||||| |||| ||||  |||||||||||||||||||||||||||||||||    
T  12935599 atttttcgtcctaccccccattttattctccataaacacagagaaatgacagttttagacctaccccctatg 12935528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 666 - 839
Target Start/End: Complemental strand, 18505461 - 18505288
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||| ||||||||| |||||||||||  ||| | |||||||||||| |||| ||||||||||||||||||| ||||||||| |||| ||||||||||    
T  18505461 ttaattatacttttggtcctcgtgttttggtctactcacgaaactgatcctgcccttttaaaacataacaaaacagtccttcaattatcatttttgttgc 18505362  T
Q  766 atttttcgtcctaccccccattttattttccaaaaacgtagagaaatgacagttttagacctaccccctatgct 839  Q
    ||||||||||||||||||||||||||| ||||| |||| |||||||||||||||||| | ||| ||||||||||    
T  18505361 atttttcgtcctaccccccattttattctccaacaacgaagagaaatgacagttttaaatctaacccctatgct 18505288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 666 - 837
Target Start/End: Complemental strand, 1149974 - 1149802
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||||||||||| ||||||||||  |||| | | ||||||| ||||||| |||||||| | |||||||||||||||||| || | ||||||||||    
T  1149974 ttaattacacttttggtcctcgtgttttagcctactcatgaaactggtcatgcccttttaaaatagaacaaaacggtccttcaattaccatttttgttgc 1149875  T
Q  766 atttttcgtcctaccccccattttattttcc-aaaaacgtagagaaatgacagttttagacctaccccctatg 837  Q
    ||||||||||||||||||||||||||| ||| ||||||| |||||||||||||||||||||||||||||||||    
T  1149874 atttttcgtcctaccccccattttattctccaaaaaacgcagagaaatgacagttttagacctaccccctatg 1149802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 666 - 823
Target Start/End: Original strand, 2319675 - 2319832
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||| ||||||| ||||||||||| |||| | ||||||||| ||||||| |||||||||| |||||||||||||||||| |||| ||||||||||    
T  2319675 ttaattacatttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 2319774  T
Q  766 atttttcgtcctaccccccattttattttccaaaaacgtagagaaatgacagttttag 823  Q
    ||||||||||||||||||||||||||| |||| ||||| |||||||||| ||||||||    
T  2319775 atttttcgtcctaccccccattttattctccagaaacgcagagaaatgatagttttag 2319832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 666 - 839
Target Start/End: Original strand, 28472640 - 28472812
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||||||||||| ||||||||||| || | | |||||| || || |||| |||||||||| ||||||| |||| ||||| |||| ||||||||||    
T  28472640 ttaattacacttttggtcctcgtgttttggccaactcacgaaagtggtcctgccattttaaaacagaacaaaatggtcattcaattatcatttttgttgc 28472739  T
Q  766 atttttcgtcctaccccccattttattttccaaaaacgtagagaaatgacagttttagacctaccccctatgct 839  Q
    ||||||||||||| ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||    
T  28472740 atttttcgtccta-cccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 28472812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 666 - 839
Target Start/End: Original strand, 29859829 - 29860001
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||||||||||| ||||||||||| || | | |||||| || || |||| |||||||||| ||||||| |||| ||||| |||| ||||||||||    
T  29859829 ttaattacacttttggtcctcgtgttttggccaactcacgaaagtggtcctgccattttaaaacagaacaaaatggtcattcaattatcatttttgttgc 29859928  T
Q  766 atttttcgtcctaccccccattttattttccaaaaacgtagagaaatgacagttttagacctaccccctatgct 839  Q
    ||||||||||||| ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||    
T  29859929 atttttcgtccta-cccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 29860001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 666 - 839
Target Start/End: Complemental strand, 31470858 - 31470685
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||||||||||| || |||||||  |||| | ||||||||| |  |||| |||||||||| |||||||||||||||||| |||| ||||||||||    
T  31470858 ttaattacacttttggtccttgtgttttagcctactcacgaaactggttctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 31470759  T
Q  766 atttttcgtcctaccccccattttattttccaaaaacgtagagaaatgacagttttagacctaccccctatgct 839  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||||||| ||||||| ||||||| ||||||    
T  31470758 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacaattttagatctaccccttatgct 31470685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 664 - 839
Target Start/End: Complemental strand, 2322762 - 2322588
Alignment:
Q  664 gtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgtt 763  Q
    |||||||||||||||||||  ||||||||||  ||| | ||||||||  || ||||||||||||||| |||||||||||||||||| |||| ||||||||    
T  2322762 gtttaattacacttttggtcttcgtgttttggtctactcacgaaactagtcttgcctttttaaaacagaacaaaacggtccttcaattatcatttttgtt 2322663  T
Q  764 gcatttttcgtcctaccccccattttattttccaaaaacgtagagaaatgacagttttagacctaccccctatgct 839  Q
    ||||||||||||||||||| ||||||||| ||| |||||  ||||||||||||||||||||||| |||||||||||    
T  2322662 gcatttttcgtcctacccctcattttattctcc-aaaacacagagaaatgacagttttagaccttccccctatgct 2322588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 666 - 839
Target Start/End: Original strand, 11444990 - 11445163
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||||||||||| ||||||||||| |||| | ||||| ||| || ||||  ||||||||| || |||| |||||||||| |||| ||||||||||    
T  11444990 ttaattacacttttggtcctcgtgttttggcctactcacgaagctggtcctgcccctttaaaacagaataaaatggtccttcaattatcatttttgttgc 11445089  T
Q  766 atttttcgtcctaccccccattttattttccaaaaacgtagagaaatgacagttttagacctaccccctatgct 839  Q
    |||||||||||||||| |||||||||| || ||||||  |||||||||||||||||||||||||||||||||||    
T  11445090 atttttcgtcctaccctccattttattctctaaaaacacagagaaatgacagttttagacctaccccctatgct 11445163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 665 - 832
Target Start/End: Original strand, 10899941 - 10900109
Alignment:
Q  665 tttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttg 764  Q
    ||||||||||||||||||  |||||||||| |||| | ||||||||| || |||| |||||||||| |||||||||||||||||| |||| |||||||||    
T  10899941 tttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 10900040  T
Q  765 catttttcgtcctaccccccatttt-attttccaaaaacgtagagaaatgacagttttagacctacccc 832  Q
    |||||||||||||||| || ||||| |   |||| ||||| ||||||||||||||||||||||||||||    
T  10900041 catttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttagacctacccc 10900109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 666 - 823
Target Start/End: Complemental strand, 11445529 - 11445371
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||||||||||| ||||||||||| |||| | ||||||||| || ||||||||||||||| |||||||||||||||||| |||| ||||||||||    
T  11445529 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 11445430  T
Q  766 atttttcgtcctaccccccatttt-attttccaaaaacgtagagaaatgacagttttag 823  Q
    ||||||||||||||| || ||||| |   || | ||||| |||||||||||||||||||    
T  11445429 atttttcgtcctacctcctattttcaaactctagaaacgcagagaaatgacagttttag 11445371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 666 - 823
Target Start/End: Original strand, 12935160 - 12935318
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||||||||||| ||||||||||| |||| | ||||||||| || |||| |||||||||| |||||||||||||||||| |||| ||||||||||    
T  12935160 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 12935259  T
Q  766 atttttcgtcctaccccccatttt-attttccaaaaacgtagagaaatgacagttttag 823  Q
    ||||||||||||||| || ||||| |   |||| ||||| |||||||||||||||||||    
T  12935260 atttttcgtcctacctcctattttcaaactccataaacgcagagaaatgacagttttag 12935318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 666 - 823
Target Start/End: Complemental strand, 23075670 - 23075512
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||||||||||| ||||||||||| |||| | ||||||||| ||||||| |||||||||| |||||||||||||||||| |||| ||||||||||    
T  23075670 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 23075571  T
Q  766 atttttcgtcctacccccca-ttttattttccaaaaacgtagagaaatgacagttttag 823  Q
    ||||||||| ||||| || | |||||   |||||||| | |||||||||||||||||||    
T  23075570 atttttcgttctacctcctatttttaaactccaaaaatgcagagaaatgacagttttag 23075512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 664 - 823
Target Start/End: Original strand, 18504920 - 18505080
Alignment:
Q  664 gtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgtt 763  Q
    ||||||||||||||||||| ||||||||||| |||| | ||||||||| || ||||||||||||||| ||||||||||| |||||| |||| ||||||||    
T  18504920 gtttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcctttttaaaacagaacaaaacggttcttcaattatcatttttgtt 18505019  T
Q  764 gcatttttcgtcctaccccccatttt-attttccaaaaacgtagagaaatgacagttttag 823  Q
     |||||||||||||||| || ||||| |   || | ||| |||||||||||||||||||||    
T  18505020 tcatttttcgtcctacctcctattttcaaactctagaaatgtagagaaatgacagttttag 18505080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 661 - 839
Target Start/End: Original strand, 23073997 - 23074164
Alignment:
Q  661 aaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatctttttt 760  Q
    |||| ||||||||||||||||| ||||||||||| |||| | ||||||||| || |||| |||||||| | |||||||||||||||||| ||||          
T  23073997 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaacggtccttcaattatc------ 23074090  T
Q  761 gttgcatttttcgtcctaccccccattttattttccaaaaacgtagagaaatgacagttttagacctaccccctatgct 839  Q
         ||||||||||||||||||||||||||| |||||||||| |||||||| |||||||||||||||||  |||||||    
T  23074091 -----atttttcgtcctaccccccattttattctccaaaaacgcagagaaataacagttttagacctaccttctatgct 23074164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 666 - 823
Target Start/End: Complemental strand, 22219895 - 22219737
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||||||||||| ||||||||||| |||| | ||||||||| || |||| |||||||||| |||||||||||||||||| |||| ||||||||||    
T  22219895 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 22219796  T
Q  766 atttttcgtcctaccccccatttt-attttccaaaaacgtagagaaatgacagttttag 823  Q
    ||||||||| ||||| || ||||| |   |||| ||||  |||||||||||||||||||    
T  22219795 atttttcgttctacctcctattttcaaactccagaaactcagagaaatgacagttttag 22219737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 666 - 826
Target Start/End: Original strand, 4811375 - 4811535
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||||||||||| |  || |||||  ||| | ||||||||| ||||||| |||||||| | || ||||||||||||||| |||| |||||||| |    
T  4811375 ttaattacacttttggtcccagtattttggtctactcacgaaactggtcatgcccttttaaaatagaataaaacggtccttcaattatcatttttgtttc 4811474  T
Q  766 atttttcgtcctaccccccattttattttccaaaaacgtagagaaatgacagttttagacc 826  Q
    |||||||||| |||||||||||||||| | |||||||| ||| |||| |||||||||||||    
T  4811475 atttttcgtcttaccccccattttattcttcaaaaacgcagataaataacagttttagacc 4811535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 660 - 823
Target Start/End: Complemental strand, 20741652 - 20741485
Alignment:
Q  660 aaaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatc---tt 756  Q
    ||||| ||||||||||| ||||| ||||||||||| |||| | |||||||||||| |||| |||||||||| |||||||||||||||||| ||||   ||    
T  20741652 aaaggcttaattacactcttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 20741553  T
Q  757 ttttgttgcatttttcgtcctaccccccatttt-attttccaaaaacgtagagaaatgacagttttag 823  Q
    |||| ||||||||||||||||||| || ||||| |   |||| ||||| |||||||||||| ||||||    
T  20741552 tttttttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacaattttag 20741485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 666 - 789
Target Start/End: Complemental strand, 4811798 - 4811675
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||| ||||||| | ||||||||||| |||| | | |||||||||||||| ||||||||||| |||||||||||||||||| |||| ||||||||||    
T  4811798 ttaattatacttttgatcctcgtgttttggcctactcatgaaactgatcatgcatttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 4811699  T
Q  766 atttttcgtcctaccccccatttt 789  Q
    ||||||| || |||| || |||||    
T  4811698 atttttcatcatacctcctatttt 4811675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 658 - 832
Target Start/End: Original strand, 11276585 - 11276760
Alignment:
Q  658 taaaaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttt 757  Q
    ||||||| |||||||||| ||| || | |||||||||  ||| | | |||||||||| | || |||||||||| ||||||| |||||||||| | || ||    
T  11276585 taaaaggcttaattacacgtttagtccgcgtgttttggtctactcatgaaactgatcctacccttttaaaacagaacaaaatggtccttcaattgtcatt 11276684  T
Q  758 tttgttgcatttttcgtcctaccccccatttt-attttccaaaaacgtagagaaatgacagttttagacctacccc 832  Q
    |||||| |||||||||||||||| || ||||| |   |||||||||| ||||||||||||||||||| ||||||||    
T  11276685 tttgtttcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcctacccc 11276760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 661 - 823
Target Start/End: Original strand, 31470313 - 31470476
Alignment:
Q  661 aaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatctttttt 760  Q
    |||| ||||||||||||||| | ||||||||||| |||| | ||||||||| ||||||  |||||||||| |||||||| ||| ||||| |||  |||||    
T  31470313 aaggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcatgctcttttaaaacagaacaaaacagtcattcaattattattttt 31470412  T
Q  761 gttgcatttttcgtcctaccccccatttt-attttccaaaaacgtagagaaatgacagttttag 823  Q
    |||||||||||||||||||| || ||||| |   |||| ||||| ||||||||| |||||||||    
T  31470413 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 31470476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 661 - 791
Target Start/End: Complemental strand, 3835273 - 3835143
Alignment:
Q  661 aaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatctttttt 760  Q
    |||||||||||||||||||||| |  |||||||| |||| | |||||| || || ||||| ||||||||| |||||||  |||||| || |||| |||||    
T  3835273 aaggtttaattacacttttggtccatgtgttttgacctactcacgaaaatggtcctgcctctttaaaacagaacaaaattgtcctttaattatcattttt 3835174  T
Q  761 gttgcatttttcgtcctaccccccattttat 791  Q
    || ||||||||||||||||||||||||||||    
T  3835173 gtggcatttttcgtcctaccccccattttat 3835143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 666 - 780
Target Start/End: Complemental strand, 18257679 - 18257565
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||| ||||||||| ||||||||||| |||| | ||||||||| || |||| |||||||||| |||||||||||||||||| |||  |||||||| |    
T  18257679 ttaattatacttttggtcctcgtgttttgacctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattattatttttgttac 18257580  T
Q  766 atttttcgtcctacc 780  Q
    |||||||||||||||    
T  18257579 atttttcgtcctacc 18257565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 666 - 789
Target Start/End: Original strand, 15827641 - 15827766
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaa--acggtccttcaagtatcttttttgtt 763  Q
    ||||||||||||||||| ||||||||||| | || | ||||||||| |  || | |||||||||||||||||  |||||||||||| |||| ||||||||    
T  15827641 ttaattacacttttggtcctcgtgttttggcttactcacgaaactggttctgtccttttaaaacataacaaattacggtccttcaactatcatttttgtt 15827740  T
Q  764 gcatttttcgtcctaccccccatttt 789  Q
    ||||||||||||||||| || |||||    
T  15827741 gcatttttcgtcctacctcctatttt 15827766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 666 - 789
Target Start/End: Original strand, 29033437 - 29033560
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||||||||||| ||||| ||||| |||  | |||||| || || |||| |||||||||| |||||||| ||||||||  |||| ||||||||||    
T  29033437 ttaattacacttttggtcctcgtattttggcctgctcacgaaattggtcctgcccttttaaaacagaacaaaactgtccttcagttatcatttttgttgc 29033536  T
Q  766 atttttcgtcctaccccccatttt 789  Q
    |  |||| ||||||||||||||||    
T  29033537 acatttcatcctaccccccatttt 29033560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 666 - 803
Target Start/End: Original strand, 18296148 - 18296284
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||| | |||| || ||||||||||| | || | || ||| ||||  |||| |||||||||| |||||||| ||||||||  |||| ||||||||||    
T  18296148 ttaattataattttagtcctcgtgttttgacttactcacaaaattgatattgcccttttaaaacagaacaaaaccgtccttcatttatcatttttgttgc 18296247  T
Q  766 atttttcgtcctaccccccattttattttccaaaaacg 803  Q
    ||||||||||||| ||||||||||||  ||||||||||    
T  18296248 atttttcgtccta-cccccattttatcctccaaaaacg 18296284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 666 - 803
Target Start/End: Complemental strand, 29035179 - 29035042
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    |||||||||||||| || ||||||||||  |||| | |||||| || | ||||| |||||||||| |||||||  |||||| |  |||| ||||||||||    
T  29035179 ttaattacacttttcgtcctcgtgttttagcctactcacgaaattggttatgcccttttaaaacagaacaaaattgtcctttagttatcatttttgttgc 29035080  T
Q  766 atttttcgtcctaccccccattttattttccaaaaacg 803  Q
    ||||||||||| |||| ||||||| |  ||||||||||    
T  29035079 atttttcgtcccaccctccattttttcctccaaaaacg 29035042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 666 - 749
Target Start/End: Original strand, 1149468 - 1149551
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaa 749  Q
    ||||||||||||||| | ||||||||||| |||| | ||||||||| || |||| |||||||||| ||||||| ||||||||||    
T  1149468 ttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaa 1149551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 756 - 838
Target Start/End: Complemental strand, 35163639 - 35163557
Alignment:
Q  756 tttttgttgcatttttcgtcctaccccccattttattttccaaaaacgtagagaaatgacagttttagacctaccccctatgc 838  Q
    ||||| ||||| |||| |||||||| || |||||    |||||||||  ||||||||||||||||||| ||||||||||||||    
T  35163639 ttttttttgcagttttagtcctacctcctattttcaactccaaaaacacagagaaatgacagttttaggcctaccccctatgc 35163557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 126; Significance: 2e-64; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 126; E-Value: 2e-64
Query Start/End: Original strand, 666 - 839
Target Start/End: Complemental strand, 2865297 - 2865124
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||||||||||| ||||||||||| |||| | ||||||||| || |||| |||||||||| |||||||||||||||||| |||| |||||||| |    
T  2865297 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgtttc 2865198  T
Q  766 atttttcgtcctaccccccattttattttccaaaaacgtagagaaatgacagttttagacctaccccctatgct 839  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  2865197 atttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 2865124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 122; E-Value: 4e-62
Query Start/End: Original strand, 666 - 835
Target Start/End: Complemental strand, 14215785 - 14215616
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||| ||||||| ||||||||||| |||| | |||||||||||| |||| |||||||||| ||||||||||||||||||||||| ||||||||||    
T  14215785 ttaattacaattttggtcctcgtgttttgacctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaagtatcatttttgttgc 14215686  T
Q  766 atttttcgtcctaccccccattttattttccaaaaacgtagagaaatgacagttttagacctacccccta 835  Q
    |||||||||| || ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  14215685 atttttcgtcttaacccccattttattctccaaaaacgtagagaaatgacagttttagacctacccccta 14215616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 118; E-Value: 9e-60
Query Start/End: Original strand, 666 - 839
Target Start/End: Original strand, 8647441 - 8647614
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||||||||||| ||||||||||| |||| | ||||||||| || |||| |||||||||| ||||||| |||||||||| |||| ||||||||||    
T  8647441 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccgttttaaaacagaacaaaatggtccttcaattatcatttttgttgc 8647540  T
Q  766 atttttcgtcctaccccccattttattttccaaaaacgtagagaaatgacagttttagacctaccccctatgct 839  Q
    ||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||| |||||||    
T  8647541 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccctctatgct 8647614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 118; E-Value: 9e-60
Query Start/End: Original strand, 666 - 839
Target Start/End: Complemental strand, 18183511 - 18183338
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||||||||||| ||||||||||| |||| | ||||||||| || |||| |||||||||| |||||||||||||||||| |||| ||||||||||    
T  18183511 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 18183412  T
Q  766 atttttcgtcctaccccccattttattttccaaaaacgtagagaaatgacagttttagacctaccccctatgct 839  Q
    ||||||||||||||||| ||||||||| |||||||||| |||||||| ||||||||||||||||||||||||||    
T  18183411 atttttcgtcctacccctcattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 18183338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 666 - 839
Target Start/End: Complemental strand, 5819471 - 5819298
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||||||||||| ||||||||||| |||| | ||||||||| || |||| |||||||||| |||||||||||| ||||| |||| ||||||||||    
T  5819471 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 5819372  T
Q  766 atttttcgtcctaccccccattttattttccaaaaacgtagagaaatgacagttttagacctaccccctatgct 839  Q
    ||||||||||||||||||||||||||| |||||||||| | |||||||||||||||||| ||||||||||||||    
T  5819371 atttttcgtcctaccccccattttattctccaaaaacgcaaagaaatgacagttttagatctaccccctatgct 5819298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 662 - 839
Target Start/End: Complemental strand, 15372419 - 15372242
Alignment:
Q  662 aggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttg 761  Q
    ||||||||||||||||||||| ||||||||||| |||| | ||||||||| || |||| |||||||||| ||||||||||||||||||||||| ||||||    
T  15372419 aggtttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaagtatcatttttg 15372320  T
Q  762 ttgcatttttcgtcctaccccccattttattttccaaaaacgtagagaaatgacagttttagacctaccccctatgct 839  Q
    |||||||||| || ||||  |||||||||||||||||||||| |||||||||||||||||||||||||| | ||||||    
T  15372319 ttgcattttttgttctacatcccattttattttccaaaaacgcagagaaatgacagttttagacctacctcttatgct 15372242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 666 - 839
Target Start/End: Original strand, 19359139 - 19359312
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||||||||||| ||| ||||||| |||| | ||||||||| || |||| |||||||| | |||||||||||||||||| |||| ||||||||||    
T  19359139 ttaattacacttttggtcctcttgttttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaacggtccttcaattatcatttttgttgc 19359238  T
Q  766 atttttcgtcctaccccccattttattttccaaaaacgtagagaaatgacagttttagacctaccccctatgct 839  Q
    ||||||||||||||||||||||||||| |||||||||| ||||||||||||||| |||||||||||||||||||    
T  19359239 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttctagacctaccccctatgct 19359312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 666 - 839
Target Start/End: Complemental strand, 24362378 - 24362205
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||||||||||| ||||| ||||| |||| | ||||||||| || |||| |||||||||| || |||||||||||||||||||| ||||||||||    
T  24362378 ttaattacacttttggtcctcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaataaaacggtccttcaagtatcatttttgttgc 24362279  T
Q  766 atttttcgtcctaccccccattttattttccaaaaacgtagagaaatgacagttttagacctaccccctatgct 839  Q
    ||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| || ||||||||||    
T  24362278 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacttatcccctatgct 24362205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 110; E-Value: 6e-55
Query Start/End: Original strand, 666 - 839
Target Start/End: Original strand, 15708974 - 15709146
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||||||||||| || |||||||| |||| | ||||||||| | ||||| |||||||||| |||||||||||||||||| |||| ||||||||||    
T  15708974 ttaattacacttttggtcctagtgttttggcctactcacgaaactggttatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 15709073  T
Q  766 atttttcgtcctaccccccattttattttccaaaaacgtagagaaatgacagttttagacctaccccctatgct 839  Q
    || |||||||||| ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||    
T  15709074 atatttcgtccta-cccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 15709146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 661 - 839
Target Start/End: Complemental strand, 29455289 - 29455111
Alignment:
Q  661 aaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatctttttt 760  Q
    |||| |||||||||| |||||| |||||||||||  ||| | ||||||||| || |||| |||||||||| ||||||| |||||||||| |||| |||||    
T  29455289 aaggcttaattacacctttggtcctcgtgttttggtctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaattatcattttt 29455190  T
Q  761 gttgcatttttcgtcctaccccccattttattttccaaaaacgtagagaaatgacagttttagacctaccccctatgct 839  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| | ||||||    
T  29455189 gttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacatacctcatatgct 29455111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 666 - 839
Target Start/End: Original strand, 8460933 - 8461106
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    |||||| ||||||||||  |||| ||||| |||| | ||||||||| || |||| |||||||||| |||||||||||| ||||| |||| ||||||||||    
T  8460933 ttaattccacttttggtcatcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 8461032  T
Q  766 atttttcgtcctaccccccattttattttccaaaaacgtagagaaatgacagttttagacctaccccctatgct 839  Q
    |||||||||| |||||||||||||||| |||||||| | |||||||||||||||||||||||||||||||||||    
T  8461033 atttttcgtcataccccccattttattctccaaaaatgcagagaaatgacagttttagacctaccccctatgct 8461106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 706 - 839
Target Start/End: Complemental strand, 164693 - 164560
Alignment:
Q  706 aaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgcatttttcgtcctaccccccattttattttccaaaaacgta 805  Q
    |||||| || |||| |||||||||| |||||||||||||||||| |||| |||||||||||||||| |||||||||||||||||||| |||||||| |||    
T  164693 aaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcattttttgtcctaccccccattttattctccaaaaatgta 164594  T
Q  806 gagaaatgacagttttagacctaccccctatgct 839  Q
    ||||||||||||||||||||||||||||||||||    
T  164593 gagaaatgacagttttagacctaccccctatgct 164560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 660 - 839
Target Start/End: Original strand, 16018586 - 16018763
Alignment:
Q  660 aaaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttt 759  Q
    ||||| |||||||||||||||||  |||||||||| |||||| |||||| |||||||||| |||||||| | |||||||||||||||||| |||  ||||    
T  16018586 aaaggcttaattacacttttggtcttcgtgttttggcctattcacgaaattgatcatgcccttttaaaatagaacaaaacggtccttcaattat-atttt 16018684  T
Q  760 tgttgcatttttcgtcctaccccccattttattttccaaaaacgtagagaaatgacagttttagacctaccccctatgct 839  Q
    | ||||||||| ||||||| ||||||||||||| ||||||||  |||| |||||||||||||||||||||||||||||||    
T  16018685 tattgcattttccgtccta-cccccattttattctccaaaaatatagaaaaatgacagttttagacctaccccctatgct 16018763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 669 - 823
Target Start/End: Original strand, 24361843 - 24361997
Alignment:
Q  669 attacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgcatt 768  Q
    |||||||||||||| | | ||||||| ||||   ||||||||||||||||| || ||||||| ||||||| ||||||||||||||| |||||||||||||    
T  24361843 attacacttttggtccccatgttttggcctacccacgaaactgatcatgcccttgtaaaacagaacaaaatggtccttcaagtatcatttttgttgcatt 24361942  T
Q  769 tttcgtcctaccccccattttattttccaaaaacgtagagaaatgacagttttag 823  Q
    |||||||||||||||||||||||| |||| ||||| |||||||||| ||||||||    
T  24361943 tttcgtcctaccccccattttattctccacaaacgcagagaaatgatagttttag 24361997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 666 - 823
Target Start/End: Original strand, 2864757 - 2864915
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||||||||||| || |||||||| |||| | |||||| |||||||||| ||||||||||||||||||||||||||||| |||| ||||||||||    
T  2864757 ttaattacacttttggtccttgtgttttggcctactcacgaaattgatcatgcccttttaaaacataacaaaacggtccttcaattatcatttttgttgc 2864856  T
Q  766 atttttcgtcctaccccccatttt-attttccaaaaacgtagagaaatgacagttttag 823  Q
    ||||||||||||||| || ||||| |   |||| ||||| |||||||||||||||||||    
T  2864857 atttttcgtcctacctcctattttcaaactccataaacgcagagaaatgacagttttag 2864915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 662 - 823
Target Start/End: Original strand, 18182969 - 18183131
Alignment:
Q  662 aggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttg 761  Q
    |||||||||||||||||||||  |||||||||| |||| | ||||||||| ||||||| |||||||||| |||||||||||||||||| |||| ||||||    
T  18182969 aggtttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 18183068  T
Q  762 ttgcatttttcgtcctacccccca-ttttattttccaaaaacgtagagaaatgacagttttag 823  Q
    ||||||||||||||||||| || | ||||||   ||| ||||| |||||||||||||||||||    
T  18183069 ttgcatttttcgtcctacctcctatttttataccccagaaacgcagagaaatgacagttttag 18183131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 669 - 823
Target Start/End: Original strand, 24325218 - 24325372
Alignment:
Q  669 attacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgcatt 768  Q
    |||||||||||||| | | ||||||| ||||   ||||||||||||||||| || ||||||| ||||||| ||||||||||||||| ||||||| |||||    
T  24325218 attacacttttggtccccatgttttggcctacccacgaaactgatcatgcccttgtaaaacagaacaaaatggtccttcaagtatcatttttgtcgcatt 24325317  T
Q  769 tttcgtcctaccccccattttattttccaaaaacgtagagaaatgacagttttag 823  Q
    |||||||||||||||||||||||| |||| ||||| |||||||||| ||||||||    
T  24325318 tttcgtcctaccccccattttattctccacaaacgcagagaaatgatagttttag 24325372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 651 - 823
Target Start/End: Original strand, 5818917 - 5819090
Alignment:
Q  651 acaaatttaaaaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaag 750  Q
    |||||||||| ||||||||||||||||||||| ||||||||||| |||| | ||||||||| || |||| |||||||||| |||||||||||| |||||     
T  5818917 acaaatttaataggtttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtctttcaat 5819016  T
Q  751 tatcttttttgttgcatttttcgtcctaccccccatttt-attttccaaaaacgtagagaaatgacagttttag 823  Q
    |||| |||||||||||||||||||| |||| || ||||| |   |||| ||||| |||||||||||||||||||    
T  5819017 tatcatttttgttgcatttttcgtcttacctcctattttcaaactccagaaacgcagagaaatgacagttttag 5819090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 666 - 839
Target Start/End: Complemental strand, 24332106 - 24331929
Alignment:
Q  666 ttaattacacttttggttc-tcgtgttttgccctatttacgaaactgatcatgccttttt-aaaacataacaaaacggtccttcaagtatc-ttttttgt 762  Q
    |||||||||||||| | || || ||||||| | || | |||||||||||| ||||||||| |||||| |||||||||||||| ||| |||| ||||||||    
T  24332106 ttaattacactttttggtcatcatgttttggcatactcacgaaactgatcctgccttttttaaaacagaacaaaacggtcctgcaattatcattttttgt 24332007  T
Q  763 tgcattttt-cgtcctaccccccattttattttccaaaaacgtagagaaatgacagttttagacctaccccctatgct 839  Q
    ||||||||| |||||||||||||||| |||| |||||||||| |||||||||||||||||||||||| ||||||||||    
T  24332006 tgcattttttcgtcctaccccccattctattctccaaaaacgcagagaaatgacagttttagacctatcccctatgct 24331929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 666 - 823
Target Start/End: Complemental strand, 8647980 - 8647822
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||||||||||| ||||||||||| |||| | |||||||||||| |||| |||||||||| |||||||||||||||||| |||| ||||||||||    
T  8647980 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 8647881  T
Q  766 atttttcgtcctaccccccatttt-attttccaaaaacgtagagaaatgacagttttag 823  Q
    |||||||||| ||||  | ||||| |   |||| ||||| |||||||||||||||||||    
T  8647880 atttttcgtcataccttctattttcaaactccataaacgcagagaaatgacagttttag 8647822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 666 - 828
Target Start/End: Complemental strand, 14464062 - 14463901
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    |||||||||||||| || ||||||||||| |||| | |||||||| ||  || | |||||||| | ||||||||| |||||||| |||| ||||| ||||    
T  14464062 ttaattacacttttagtcctcgtgttttggcctactcacgaaactaattttgtccttttaaaatagaacaaaacgatccttcaattatcatttttattgc 14463963  T
Q  766 atttttcgtcctaccccccattttattttccaaaaacgtagagaaatgacagttttagaccta 828  Q
    ||||||||||||| |||| |||||||| |||||||||| ||||||||||||||||||||||||    
T  14463962 atttttcgtccta-ccccaattttattctccaaaaacgcagagaaatgacagttttagaccta 14463901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 666 - 823
Target Start/End: Complemental strand, 19359678 - 19359520
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||||||||||| ||||||||||| |||| | ||||||||| || |||| |||||||||| |||||||||||||||||| |||| |||||||||     
T  19359678 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgg 19359579  T
Q  766 atttttcgtcctaccccccatttt-attttccaaaaacgtagagaaatgacagttttag 823  Q
    ||||||||||||||| || ||||| |   |||| ||||||||||||||| |||||||||    
T  19359578 atttttcgtcctacctcctattttcaaactccagaaacgtagagaaatggcagttttag 19359520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 685 - 839
Target Start/End: Original strand, 25000112 - 25000266
Alignment:
Q  685 tcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgcatttttcgtcctacccccc 784  Q
    |||||||||| |||| | |||||  || ||||||| | |||||||| || |||| ||||||| || |||| ||||| |||||||||| ||||||||||||    
T  25000112 tcgtgttttggcctactcacgaatttggtcatgccctgttaaaacagaataaaatggtcctttaattatcatttttattgcattttttgtcctacccccc 25000211  T
Q  785 attttattttccaaaaacgtagagaaatgacagttttagacctaccccctatgct 839  Q
    |||||||| ||||||||||||||||||||||||||||||| ||||| | ||||||    
T  25000212 attttattctccaaaaacgtagagaaatgacagttttagatctacctcatatgct 25000266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 661 - 823
Target Start/End: Complemental strand, 8461478 - 8461315
Alignment:
Q  661 aaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatctttttt 760  Q
    |||| ||||||||||||||||| ||||||||||| |||| | ||||||||| || |||  |||||||||| |||||||||||||||||| |||| |||||    
T  8461478 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgttcctgctcttttaaaacagaacaaaacggtccttcaattatcattttt 8461379  T
Q  761 gttgcatttttcgtcctaccccccatttt-attttccaaaaacgtagagaaatgacagttttag 823  Q
    | ||||||||||||| |||| || ||||| |   |||| ||||| |||||||||||| ||||||    
T  8461378 gctgcatttttcgtcatacctcctattttcaaactccagaaacgcagagaaatgacaattttag 8461315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 666 - 823
Target Start/End: Original strand, 14215244 - 14215402
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||||||||||| ||||||||||| | || | ||||||||| | || || |||||||||| ||||||| |||||||||  |||| ||||||||||    
T  14215244 ttaattacacttttggtcctcgtgttttggcttactcacgaaactggttatacccttttaaaacagaacaaaaaggtccttcagttatcatttttgttgc 14215343  T
Q  766 atttttcgtcctaccccccatttt-attttccaaaaacgtagagaaatgacagttttag 823  Q
    ||||||||||||||| || ||||| |   |||| ||||| |||||||||||||||||||    
T  14215344 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 14215402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 666 - 823
Target Start/End: Original strand, 24331562 - 24331722
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatc--ttttttgtt 763  Q
    ||||||||||||||||| |||||||||||  ||| | ||||||||| || |||| |||||||||| |||||||||||||||||| ||||  |||||||||    
T  24331562 ttaattacacttttggtcctcgtgttttgatctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatctattttttgtt 24331661  T
Q  764 gcatttttcgtcctaccccccatttt-attttccaaaaacgtagagaaatgacagttttag 823  Q
    ||||||||| ||||| | || ||||| |   |||| ||||| |||||||||||||||||||    
T  24331662 gcatttttcatcctagctcctattttcaaactccagaaacgcagagaaatgacagttttag 24331722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 659 - 825
Target Start/End: Complemental strand, 25000638 - 25000471
Alignment:
Q  659 aaaaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatctttt 758  Q
    |||||| |||||||||||||||||  || ||||||| |||| | |||||| || |||||   |||||||||| ||||||| |||| ||||| |||| |||    
T  25000638 aaaaggcttaattacacttttggtcttcatgttttggcctactcacgaaattggtcatgttcttttaaaacagaacaaaatggtcattcaattatcattt 25000539  T
Q  759 ttgttgcatttttcgtcctaccccccatttt-attttccaaaaacgtagagaaatgacagttttagac 825  Q
    |||||||||||||||||| ||| || ||||| |   |||||||||| |||||||||||||||||||||    
T  25000538 ttgttgcatttttcgtcccacctcctattttcaaactccaaaaacgcagagaaatgacagttttagac 25000471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 666 - 822
Target Start/End: Original strand, 164194 - 164350
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||||||||||| ||||||||||| |||| | ||||||||| || |||| ||||| |||| |||||||||||| ||||| ||||  |||||||||    
T  164194 ttaattacacttttggtcctcgtgttttgacctactcacgaaactggtcctgcccttttataacaaaacaaaacggtcattcaattatc-attttgttgc 164292  T
Q  766 atttttcgtcctaccccccatttt-attttccaaaaacgtagagaaatgacagtttta 822  Q
    ||||||||||||||| || ||||| |   |||| ||||| |||||||||||| |||||    
T  164293 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacaatttta 164350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 666 - 801
Target Start/End: Original strand, 4219666 - 4219800
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||||||||| | |||||||||||  |||||||| ||| || |||||||||||||||||| ||||||   |||||| |  |||| ||||||||||    
T  4219666 ttaattacacttttgatcctcgtgttttgggctatttacaaaaatggtcatgcctttttaaaacagaacaaagttgtcctttagttatcatttttgttgc 4219765  T
Q  766 atttttcgtcctaccccccattttattttccaaaaa 801  Q
    ||||||||||||| ||||||||||||  ||||||||    
T  4219766 atttttcgtccta-cccccattttatcctccaaaaa 4219800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 661 - 823
Target Start/End: Original strand, 29454738 - 29454901
Alignment:
Q  661 aaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatctttttt 760  Q
    |||| |||||| ||||||||||  | |||||||| |||| | |||||| || ||||||| |||||||||| ||||||||||||||| || |||| |||||    
T  29454738 aaggcttaatttcacttttggtcattgtgttttggcctactcacgaaattggtcatgcccttttaaaacagaacaaaacggtccttgaattatcattttt 29454837  T
Q  761 gttgcatttttcgtcctaccccccatttt-attttccaaaaacgtagagaaatgacagttttag 823  Q
    | |||||||||||||||||| || ||||| |   |||| ||||| |||||||||| ||||||||    
T  29454838 gctgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgatagttttag 29454901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 666 - 803
Target Start/End: Complemental strand, 7349559 - 7349422
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||||||||||| |||||||||||  ||| | |||||| || || |||  |||||||||| ||||||||  |||||||  |||| ||||||||||    
T  7349559 ttaattacacttttggtcctcgtgttttggtctactcacgaaattggtcctgctcttttaaaacaaaacaaaactatccttcagttatcatttttgttgc 7349460  T
Q  766 atttttcgtcctaccccccattttattttccaaaaacg 803  Q
    | ||||| |||||||||||||||| |  ||||||||||    
T  7349459 acttttcatcctaccccccattttttcctccaaaaacg 7349422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 662 - 825
Target Start/End: Complemental strand, 16019133 - 16018969
Alignment:
Q  662 aggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttg 761  Q
    ||||||||||||||||||||| ||| ||||||| | || | |||||| || || |||  |||||||| | || |||| ||| |||||| |||| ||||||    
T  16019133 aggtttaattacacttttggtcctcatgttttggcatactcacgaaattggtcctgctcttttaaaatagaataaaatggttcttcaattatcatttttg 16019034  T
Q  762 ttgcatttttcgtcctacccccca-ttttattttccaaaaacgtagagaaatgacagttttagac 825  Q
    ||| ||||||||||||||| || | |||||   |||| ||||| |||||||||||||||||||||    
T  16019033 ttgtatttttcgtcctacctcctatttttaaactccagaaacgcagagaaatgacagttttagac 16018969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 684 - 791
Target Start/End: Complemental strand, 4624749 - 4624642
Alignment:
Q  684 ctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgcatttttcgtcctaccccc 783  Q
    ||||||||||  |||| | |||||| || ||||| || ||||||||||||||||||  || ||||| |||| ||| ||||||||||||||||||||||||    
T  4624749 ctcgtgttttaacctactcacgaaattggtcatgtctctttaaaacataacaaaactatcattcaattatcatttatgttgcatttttcgtcctaccccc 4624650  T
Q  784 cattttat 791  Q
    ||||||||    
T  4624649 cattttat 4624642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 666 - 783
Target Start/End: Complemental strand, 4222264 - 4222147
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||||||||||| |||||||||||  ||  | |||||| || ||||||| |||||||||| |||||||  ||| ||||  |||| ||||| ||||    
T  4222264 ttaattacacttttggtcctcgtgttttgggcttctcacgaaaatggtcatgcccttttaaaacagaacaaaattgtcattcagttatcatttttattgc 4222165  T
Q  766 atttttcgtcctaccccc 783  Q
    ||||||||||||||||||    
T  4222164 atttttcgtcctaccccc 4222147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 666 - 804
Target Start/End: Original strand, 4623151 - 4623287
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    |||||||||||||||||  |||||||||| | || | |||||| || || ||||| ||||||||| |||||||  ||||||||| |||| ||||| | ||    
T  4623151 ttaattacacttttggtcatcgtgttttgacttactcacgaaattggtcctgcctctttaaaacagaacaaaattgtccttcaattatcatttttatggc 4623250  T
Q  766 atttttcgtcctaccccccattttattttccaaaaacgt 804  Q
    ||||| |||||||  |||||||||||  |||||||||||    
T  4623251 attttccgtccta--ccccattttatcctccaaaaacgt 4623287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 666 - 801
Target Start/End: Original strand, 7348562 - 7348697
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||| ||||||| ||| ||||||   ||| | |||||| || || |||| |||||||||| ||||||||  ||||||   |||| ||||||||||    
T  7348562 ttaattacatttttggtcctcatgttttagtctactcacgaaattggtcgtgcccttttaaaacagaacaaaactttccttcggttatcatttttgttgc 7348661  T
Q  766 atttttcgtcctaccccccattttattttccaaaaa 801  Q
    | |||||||||||||||||||||| | |||||||||    
T  7348662 acttttcgtcctaccccccattttttcttccaaaaa 7348697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 666 - 823
Target Start/End: Complemental strand, 15709510 - 15709353
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    |||||||||||||||||  | |||||||| |||| | | ||||||  ||||||| ||| |||||| ||||||||||||||| |  |||| ||| ||||||    
T  15709510 ttaattacacttttggtcattgtgttttggcctactcatgaaactagtcatgcccttt-aaaacagaacaaaacggtcctttagttatcatttctgttgc 15709412  T
Q  766 atttttcgtcctaccccccatttt-attttccaaaaacgtagagaaatgacagttttag 823  Q
    ||||||||||||||| || ||||| |   |||| || || |||||||||||||||||||    
T  15709411 atttttcgtcctacctcctattttcaaactccataagcgcagagaaatgacagttttag 15709353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 666 - 781
Target Start/End: Original strand, 6018317 - 6018431
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||| |||||||||||||||||||  ||| | ||||||||| ||||| | |||||||||| |||||||   | |||||| |||| ||||||||||    
T  6018317 ttaattacatttttggttctcgtgttttgttctactcacgaaactggtcatgtccttttaaaacagaacaaaattat-cttcaattatcatttttgttgc 6018415  T
Q  766 atttttcgtcctaccc 781  Q
    | |||| |||||||||    
T  6018416 agttttagtcctaccc 6018431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 703 - 801
Target Start/End: Complemental strand, 6019276 - 6019177
Alignment:
Q  703 acgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgcat-ttttcgtcctaccccccattttattttccaaaaa 801  Q
    |||||||||||| |||  |||||||||| |||||||| ||| || || |||| |||||||||||| ||||||||||||| ||||||||||  ||||||||    
T  6019276 acgaaactgatcttgctcttttaaaacagaacaaaactgtcttttaattatcatttttgttgcattttttcgtcctacctcccattttatcctccaaaaa 6019177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 666 - 776
Target Start/End: Original strand, 15371874 - 15371983
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||||||||| | ||||| |||||  ||| | |||||  || || |||| |||||||||| ||||||| |||||||||| |||| ||||||||||    
T  15371874 ttaattacacttttgatcctcgtattttggtctactcacgaat-tggtcctgcccttttaaaacagaacaaaatggtccttcaattatcatttttgttgc 15371972  T
Q  766 atttttcgtcc 776  Q
    |||||||||||    
T  15371973 atttttcgtcc 15371983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 505 - 554
Target Start/End: Original strand, 37511204 - 37511253
Alignment:
Q  505 actcatttcattaatcaatgaagagttaatacaaagaggaacataatcat 554  Q
    ||||||||| ||||||||| || |||||||||||||||||||||||||||    
T  37511204 actcatttcgttaatcaataaaaagttaatacaaagaggaacataatcat 37511253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 745 - 803
Target Start/End: Complemental strand, 13814190 - 13814133
Alignment:
Q  745 ttcaagtatcttttttgttgcatttttcgtcctaccccccattttattttccaaaaacg 803  Q
    ||||| |||| ||||||||||| |||||||||||| |||||||||||  ||||||||||    
T  13814190 ttcaattatcatttttgttgcacttttcgtcctac-ccccattttatcctccaaaaacg 13814133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 625 - 663
Target Start/End: Complemental strand, 15079059 - 15079021
Alignment:
Q  625 aataaactttacctcaaagttacattacaaatttaaaag 663  Q
    |||||||||||||||||||||||| | ||||||||||||    
T  15079059 aataaactttacctcaaagttacaatgcaaatttaaaag 15079021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 794 - 823
Target Start/End: Complemental strand, 14340822 - 14340793
Alignment:
Q  794 tccaaaaacgtagagaaatgacagttttag 823  Q
    ||||||||||||||||||||||||||||||    
T  14340822 tccaaaaacgtagagaaatgacagttttag 14340793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 794 - 839
Target Start/End: Original strand, 16752712 - 16752757
Alignment:
Q  794 tccaaaaacgtagagaaatgacagttttagacctaccccctatgct 839  Q
    |||| ||||| | |||||||| ||||||||||||||||||||||||    
T  16752712 tccataaacgcaaagaaatgatagttttagacctaccccctatgct 16752757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 119; Significance: 2e-60; HSPs: 3)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 661 - 839
Target Start/End: Original strand, 64300 - 64478
Alignment:
Q  661 aaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatctttttt 760  Q
    |||| ||||||||||||||||| ||||||||||| | || | |||||||||||| || | |||||||||| |||||||||||||||||| |||| |||||    
T  64300 aaggcttaattacacttttggtcctcgtgttttgacatactcacgaaactgatcctgaccttttaaaacagaacaaaacggtccttcaattatcattttt 64399  T
Q  761 gttgcatttttcgtcctaccccccattttattttccaaaaacgtagagaaatgacagttttagacctaccccctatgct 839  Q
    ||||||||||||||| |||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||    
T  64400 gttgcatttttcgtcataccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 64478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 660 - 778
Target Start/End: Complemental strand, 64853 - 64735
Alignment:
Q  660 aaaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttt 759  Q
    ||||||||||||||||||||||| ||||||||||| | || | ||||||||| ||  ||| |||||||||| ||||||||||||||| || |||| ||||    
T  64853 aaaggtttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcccgcccttttaaaacagaacaaaacggtcctttaattatcatttt 64754  T
Q  760 tgttgcatttttcgtccta 778  Q
    |||||||||||||||||||    
T  64753 tgttgcatttttcgtccta 64735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 794 - 839
Target Start/End: Complemental strand, 205783 - 205738
Alignment:
Q  794 tccaaaaacgtagagaaatgacagttttagacctaccccctatgct 839  Q
    |||||||||| ||||||||| |||||||||||||||||||||||||    
T  205783 tccaaaaacgcagagaaatggcagttttagacctaccccctatgct 205738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 118; Significance: 9e-60; HSPs: 58)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 118; E-Value: 9e-60
Query Start/End: Original strand, 666 - 839
Target Start/End: Complemental strand, 46193947 - 46193774
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||||||||||| ||||||||||| |||| | |||||| || || |||| |||||||||| |||||||||||||||||| |||| ||||| ||||    
T  46193947 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattgc 46193848  T
Q  766 atttttcgtcctaccccccattttattttccaaaaacgtagagaaatgacagttttagacctaccccctatgct 839  Q
    ||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||    
T  46193847 atttttcgtcctaccccccattttattctccaaaaacgtagagaattgacagttttagacctaccccctatgct 46193774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 117; E-Value: 4e-59
Query Start/End: Original strand, 659 - 839
Target Start/End: Complemental strand, 22170485 - 22170306
Alignment:
Q  659 aaaaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatctttt 758  Q
    |||||| ||||||||||||||||| ||||||||||| |||| | |||||| || || ||||||||||||||| |||||||||||| ||||| |||| |||    
T  22170485 aaaaggcttaattacacttttggtcctcgtgttttgacctactgacgaaattg-tcctgcctttttaaaacaaaacaaaacggtcattcaattatcattt 22170387  T
Q  759 ttgttgcatttttcgtcctaccccccattttattttccaaaaacgtagagaaatgacagttttagacctaccccctatgct 839  Q
    |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| |||||||||||||    
T  22170386 ttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacgtaccccctatgct 22170306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 115; E-Value: 6e-58
Query Start/End: Original strand, 661 - 839
Target Start/End: Complemental strand, 15523781 - 15523603
Alignment:
Q  661 aaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatctttttt 760  Q
    |||| |||||||||||||||||  ||||||||||  ||| | ||||||||| || |||| |||||||||| ||||||| ||||||||||||||| |||||    
T  15523781 aaggcttaattacacttttggtcatcgtgttttgggctactcacgaaactggtcctgcccttttaaaacaaaacaaaatggtccttcaagtatcattttt 15523682  T
Q  761 gttgcatttttcgtcctaccccccattttattttccaaaaacgtagagaaatgacagttttagacctaccccctatgct 839  Q
    |||||||||||||||||||||||||||||||| |||||||||| | |||||||||||||||||||||||||||||||||    
T  15523681 gttgcatttttcgtcctaccccccattttattctccaaaaacgcaaagaaatgacagttttagacctaccccctatgct 15523603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 110; E-Value: 6e-55
Query Start/End: Original strand, 666 - 839
Target Start/End: Complemental strand, 11153689 - 11153516
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||||||||||| ||||||||||| |||| | ||||||||| || |||| |||||||||| ||||||||| |||||||| |||| ||||||||||    
T  11153689 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccattttaaaacagaacaaaacgttccttcaattatcatttttgttgc 11153590  T
Q  766 atttttcgtcctaccccccattttattttccaaaaacgtagagaaatgacagttttagacctaccccctatgct 839  Q
    |||||||||||||||| |||||||||| |||||||||| |||||||| |||||||||||| |||||||||||||    
T  11153589 atttttcgtcctaccctccattttattctccaaaaacgcagagaaataacagttttagacttaccccctatgct 11153516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 110; E-Value: 6e-55
Query Start/End: Original strand, 666 - 839
Target Start/End: Original strand, 12234332 - 12234505
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||||||||||| ||| ||||||| | |||| ||||||||| || |||| |||||||||| |||||||||||| ||||| |||| ||||||||||    
T  12234332 ttaattacacttttggtcctcttgttttggcttattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 12234431  T
Q  766 atttttcgtcctaccccccattttattttccaaaaacgtagagaaatgacagttttagacctaccccctatgct 839  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||| ||||||||| ||||||||||||||||    
T  12234432 atttttcgtcctaccccccattttattctccaaaaacgcagagaaataacagttttaaacctaccccctatgct 12234505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 110; E-Value: 6e-55
Query Start/End: Original strand, 666 - 839
Target Start/End: Original strand, 33109687 - 33109860
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||| ||||||| ||||||||||| | || | ||||||||| || |||  |||||||||| |||||||||||||||||| |||| ||||||||||    
T  33109687 ttaattacatttttggtcctcgtgttttggcatactcacgaaactggtcctgctcttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 33109786  T
Q  766 atttttcgtcctaccccccattttattttccaaaaacgtagagaaatgacagttttagacctaccccctatgct 839  Q
    ||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||| |||||||    
T  33109787 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccctctatgct 33109860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 110; E-Value: 6e-55
Query Start/End: Original strand, 662 - 839
Target Start/End: Complemental strand, 54995613 - 54995437
Alignment:
Q  662 aggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttg 761  Q
    ||||||||||||||||||||| ||||||||||| |||| | ||||||||||||||||| |||||||| | |||||||||||||||||||||||  |||||    
T  54995613 aggtttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaatagaacaaaacggtccttcaagtatc-attttg 54995515  T
Q  762 ttgcatttttcgtcctaccccccattttattttccaaaaacgtagagaaatgacagttttagacctaccccctatgct 839  Q
    ||||||||||||||||| ||||||||||||| || ||||||| | |||||||| ||||||||||||||| ||||||||    
T  54995514 ttgcatttttcgtcctaacccccattttattctctaaaaacgcaaagaaatgatagttttagacctaccacctatgct 54995437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 666 - 832
Target Start/End: Complemental strand, 38962361 - 38962195
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||| ||||||| |||||||||||  ||||| ||||||||| ||  ||| |||||||||| |||||||||||||||||| |||| ||||||||||    
T  38962361 ttaattacatttttggtcctcgtgttttggtctattcacgaaactggtccggcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 38962262  T
Q  766 atttttcgtcctaccccccattttattttccaaaaacgtagagaaatgacagttttagacctacccc 832  Q
    ||||||||||||||||||||||||||| | |||||||| ||||||||||||||||||||||||||||    
T  38962261 atttttcgtcctaccccccattttattcttcaaaaacgcagagaaatgacagttttagacctacccc 38962195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 666 - 839
Target Start/End: Original strand, 4219560 - 4219733
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||| ||||||| ||||||||||| |||| | ||||||||| || |||| |||||||| | |||||||| ||||||||| |||| ||||||||||    
T  4219560 ttaattacatttttggtcctcgtgttttggcctactcacgaaactggtcctgccattttaaaataaaacaaaacagtccttcaattatcatttttgttgc 4219659  T
Q  766 atttttcgtcctaccccccattttattttccaaaaacgtagagaaatgacagttttagacctaccccctatgct 839  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| ||||| ||||||||||    
T  4219660 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttaaacctatcccctatgct 4219733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 662 - 839
Target Start/End: Complemental strand, 22434722 - 22434547
Alignment:
Q  662 aggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttg 761  Q
    ||||||||||||| ||||||| ||||||||||| |||| | ||||||||| || |||| ||||||| || |||||||||||| ||||| |||| ||||||    
T  22434722 aggtttaattacatttttggtcctcgtgttttggcctactcacgaaactggtcctgccattttaaa-cagaacaaaacggtcattcaattatcatttttg 22434624  T
Q  762 ttgcatttttcgtcctaccccccattttattttccaaaaacgtagagaaatgacagttttagacctaccccctatgct 839  Q
    |||||||||||||||||||||| |||||||| |||||||||| |||||||||||||||||||||||||||||||||||    
T  22434623 ttgcatttttcgtcctaccccc-attttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 22434547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 666 - 839
Target Start/End: Original strand, 51020800 - 51020973
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||||||||| | ||| ||||||| |  ||| || |||||| || |||| |||||||||| ||||||||| |||||||| |||| ||||||||||    
T  51020800 ttaattacacttttgatcctcatgttttggctaattcactaaactggtcctgcccttttaaaacagaacaaaacgatccttcaattatcatttttgttgc 51020899  T
Q  766 atttttcgtcctaccccccattttattttccaaaaacgtagagaaatgacagttttagacctaccccctatgct 839  Q
    ||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||    
T  51020900 atttttcgtcctaccccccattttattcttcaaaaacgtagagaaatgacagttttagacctaccccctatgct 51020973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 666 - 833
Target Start/End: Complemental strand, 25447778 - 25447611
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    |||||||||||||||||  |||||||||| |||| | ||||||||| || |||| |||||||||| |||||||||||| ||||| |||| ||||||||||    
T  25447778 ttaattacacttttggtcttcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtctttcaattatcatttttgttgc 25447679  T
Q  766 atttttcgtcctaccccccattttattttccaaaaacgtagagaaatgacagttttagacctaccccc 833  Q
    |||||||||||||||| |||||||||| |||||||||| |||||||| ||||||||||||||||||||    
T  25447678 atttttcgtcctaccctccattttattctccaaaaacgcagagaaattacagttttagacctaccccc 25447611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 666 - 839
Target Start/End: Original strand, 25937673 - 25937846
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||| ||||||| ||||||||||  |||| | ||||||||| || |||| |||||||||| |||||||||||||||||| |||| ||||||||||    
T  25937673 ttaattacatttttggtcctcgtgttttagcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 25937772  T
Q  766 atttttcgtcctaccccccattttattttccaaaaacgtagagaaatgacagttttagacctaccccctatgct 839  Q
    |||||| |||||  ||||||||||||| |||||||||| |||||||||||||||||||||||||||| ||||||    
T  25937773 attttttgtcctgtcccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccatatgct 25937846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 666 - 839
Target Start/End: Original strand, 48526199 - 48526371
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||||||||||||||||||||||| |||| | | |||||||    |||| |||||||||| |||||||||||||||||| |||| ||||||||||    
T  48526199 ttaattacacttttggttctcgtgttttgacctactcatgaaactggctctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 48526298  T
Q  766 atttttcgtcctaccccccattttattttccaaaaacgtagagaaatgacagttttagacctaccccctatgct 839  Q
    ||||||||||||| ||||||||||||| |||||||| | |||||||||||||||||||| ||||||||||||||    
T  48526299 atttttcgtccta-cccccattttattctccaaaaatgcagagaaatgacagttttagatctaccccctatgct 48526371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 666 - 839
Target Start/End: Original strand, 23494446 - 23494619
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||| ||||||| ||||||||||| |||| | ||||||||  || |||| |||||||||| |||||| ||||||||||| |||| ||||| ||||    
T  23494446 ttaattacatttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaagcggtccttcaattatcatttttattgc 23494545  T
Q  766 atttttcgtcctaccccccattttattttccaaaaacgtagagaaatgacagttttagacctaccccctatgct 839  Q
    ||||||||||||||||||||||||||| |||||| ||| |||||||||||||||||||||||||| | ||||||    
T  23494546 atttttcgtcctaccccccattttattctccaaacacgcagagaaatgacagttttagacctacctcatatgct 23494619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 660 - 839
Target Start/End: Complemental strand, 2118843 - 2118665
Alignment:
Q  660 aaaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttt 759  Q
    |||||||||||||||||||||||  |||||||||| |||  | | ||||||| || |  | ||||||||||||||||||||||| ||||| |||| ||||    
T  2118843 aaaggtttaattacacttttggtcttcgtgttttggcctgctcatgaaactggtcctatccttttaaaacataacaaaacggtcattcaattatcatttt 2118744  T
Q  760 tgttgcatttttcgtcctaccccccattttattttccaaaaacgtagagaaatgacagttttagacctaccccctatgct 839  Q
    |||||||||||||||||||| |||||||||||| |||||||||| |||||||| | ||||||||||||||||||||||||    
T  2118743 tgttgcatttttcgtcctac-ccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatgct 2118665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 732 - 839
Target Start/End: Complemental strand, 12503912 - 12503805
Alignment:
Q  732 aacaaaacggtccttcaagtatcttttttgttgcatttttcgtcctaccccccattttattttccaaaaacgtagagaaatgacagttttagacctaccc 831  Q
    ||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||| |||||||||| |||||||||||||||||||||||||||    
T  12503912 aacaaaacggtccttcaagtatcatttttgttgcatttttcgtcataccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 12503813  T
Q  832 cctatgct 839  Q
    ||||||||    
T  12503812 cctatgct 12503805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 662 - 839
Target Start/End: Original strand, 45082431 - 45082606
Alignment:
Q  662 aggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttg 761  Q
    |||||||||||| ||||||||  ||||||||||  ||| | ||||| ||| |  |||| |||||||| | |||||||||||||||||| |||| ||||||    
T  45082431 aggtttaattacgcttttggtcatcgtgttttggtctactcacgaa-ctggttttgcccttttaaaatagaacaaaacggtccttcaattatcatttttg 45082529  T
Q  762 ttgcatttttcgtcctaccccccattttattttccaaaaacgtagagaaatgacagttttagacctaccccctatgct 839  Q
    ||||||||||||||||| ||||||||||||| |||||||||  |||||||||||| ||||||||||||||||||||||    
T  45082530 ttgcatttttcgtccta-cccccattttattctccaaaaacacagagaaatgacaattttagacctaccccctatgct 45082606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 657 - 789
Target Start/End: Complemental strand, 12234880 - 12234748
Alignment:
Q  657 ttaaaaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatctt 756  Q
    ||||| || ||||||| ||||||||| ||||||||||| |||| | ||||||||||||||||| |||||||||| |||||||||||||||||| |||| |    
T  12234880 ttaaatggcttaattatacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaacagaacaaaacggtccttcaattatcat 12234781  T
Q  757 ttttgttgcatttttcgtcctaccccccatttt 789  Q
    |||||||||||||||||||||||| || |||||    
T  12234780 ttttgttgcatttttcgtcctacctcctatttt 12234748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 666 - 823
Target Start/End: Complemental strand, 20471053 - 20470895
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||||||||||| ||||||||||| |||| ||||||||||| |||| || |||||||||| |||||||||||| ||||| |||| ||||||||||    
T  20471053 ttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcattcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 20470954  T
Q  766 atttttcgtcctaccccccatttt-attttccaaaaacgtagagaaatgacagttttag 823  Q
    ||||||||||||||| || ||||| |   |||| ||||| |||||||||| ||||||||    
T  20470953 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgaaagttttag 20470895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 666 - 823
Target Start/End: Complemental strand, 45082966 - 45082808
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||||||||||| ||||||||||| | || | ||||||||| ||||||| |||||||||| |||||||||||||||||| |||| ||||||||||    
T  45082966 ttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 45082867  T
Q  766 atttttcgtcctaccccccatttt-attttccaaaaacgtagagaaatgacagttttag 823  Q
    ||||||||||||||| || ||||| |   || | ||||| |||||||||||||||||||    
T  45082866 atttttcgtcctacctcctattttcaaactctagaaacgcagagaaatgacagttttag 45082808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 666 - 825
Target Start/End: Original strand, 46193408 - 46193568
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||||||||||| ||||||||||| |||| | |||||| || || |||| |||||||||| ||||||| |||||||||| |||| ||||||||||    
T  46193408 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaaaggtccttcaattatcatttttgttgc 46193507  T
Q  766 atttttcgtcctaccccccatttt-attttccaaaaacgtagagaaatgacagttttagac 825  Q
    ||||||||||||||| || ||||| |   |||| ||||| |||||||||||||||||||||    
T  46193508 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttagac 46193568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 662 - 823
Target Start/End: Complemental strand, 4220105 - 4219943
Alignment:
Q  662 aggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttg 761  Q
    ||||||||||||||||||||| ||||||||||| |||| | |||||||||||| |||  |||||||||| ||||||| |||| ||||| |||| ||||||    
T  4220105 aggtttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgctcttttaaaacagaacaaaatggtcattcaattatcatttttg 4220006  T
Q  762 ttgcatttttcgtcctaccccccatttt-attttccaaaaacgtagagaaatgacagttttag 823  Q
    ||||||||||||||||||| || ||||| |   | |||||||| |||||||| ||||||||||    
T  4220005 ttgcatttttcgtcctacctcctattttcaaacttcaaaaacgcagagaaataacagttttag 4219943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 666 - 823
Target Start/End: Original strand, 22434182 - 22434340
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||||||||||| ||||||||||| | || | ||||||||| || |||| |||||||||| |||||||||||||||||| |||| |||||||||     
T  22434182 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgt 22434281  T
Q  766 atttttcgtcctaccccccatttt-attttccaaaaacgtagagaaatgacagttttag 823  Q
    ||||||||||||||| || ||||| |   |||| ||||| |||||||||||||||||||    
T  22434282 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 22434340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 666 - 823
Target Start/End: Original strand, 25447250 - 25447408
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||||||||||| ||||||||||| |||| | | ||||||| || |||| |||||||||| |||||||||||||||||| |||| ||||||||||    
T  25447250 ttaattacacttttggtcctcgtgttttggcctactcatgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 25447349  T
Q  766 atttttcgtcctaccccccatttt-attttccaaaaacgtagagaaatgacagttttag 823  Q
    ||||||||||||||| || ||||| |   |||| ||||| |||||||||||| ||||||    
T  25447350 atttttcgtcctacctcctattttcaaactccataaacgcagagaaatgacaattttag 25447408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 662 - 823
Target Start/End: Original strand, 54995068 - 54995230
Alignment:
Q  662 aggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttg 761  Q
    ||||||||||||||||||||| ||||||| ||| |||| | ||||||||  || | || |||||||||| |||||||||||||||||| |||| ||||||    
T  54995068 aggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttg 54995167  T
Q  762 ttgcatttttcgtcctaccccccatttt-attttccaaaaacgtagagaaatgacagttttag 823  Q
    ||||||||||||||||||| || ||||| |   |||| ||| |||||||||||||||||||||    
T  54995168 ttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 54995230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 666 - 779
Target Start/End: Complemental strand, 23494985 - 23494872
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||||||||||| ||||||||||| |||| | ||||||||| || |||| |||||||||| |||||||||||||||||| |||| ||||||||||    
T  23494985 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 23494886  T
Q  766 atttttcgtcctac 779  Q
    ||||||||||||||    
T  23494885 atttttcgtcctac 23494872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 661 - 789
Target Start/End: Original strand, 18751597 - 18751725
Alignment:
Q  661 aaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatctttttt 760  Q
    |||||||||||||||||||||| ||||||||||| |||| | |  |||||| ||||||| |||||||||| |||||||||||||||||| |||| |||||    
T  18751597 aaggtttaattacacttttggtcctcgtgttttggcctactcataaaactggtcatgcccttttaaaacagaacaaaacggtccttcaaatatcattttt 18751696  T
Q  761 gttgcatttttcgtcctaccccccatttt 789  Q
    |||||||||||||||| ||| || |||||    
T  18751697 gttgcatttttcgtcccacctcctatttt 18751725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 660 - 823
Target Start/End: Complemental strand, 48526729 - 48526565
Alignment:
Q  660 aaaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttt 759  Q
    ||||||||||||| ||||||||| |||||||||||  ||| | ||||||||| || |||| |||||||||| |||||||||||||||||| ||||  |||    
T  48526729 aaaggtttaattatacttttggtcctcgtgttttggtctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcacttt 48526630  T
Q  760 tgttgcatttttcgtcctaccccccatttt-attttccaaaaacgtagagaaatgacagttttag 823  Q
    ||||||||||||||||||||| || ||||| |   |||| ||||  |||||||||||||||||||    
T  48526629 tgttgcatttttcgtcctacctcctattttcaaactccataaacacagagaaatgacagttttag 48526565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 666 - 822
Target Start/End: Original strand, 15523238 - 15523395
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||||||||||| ||||||||||| |||| | ||||||||| || |||| |||||||||| |||||||||||||||||| |||  ||||| ||||    
T  15523238 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattattattttttttgc 15523337  T
Q  766 atttttcgtcctaccccccatttt-attttccaaaaacgtagagaaatgacagtttta 822  Q
    ||||||||||||||| || ||||| |   || | ||||| ||||||||||||||||||    
T  15523338 atttttcgtcctacctcctattttcaaactctagaaacgcagagaaatgacagtttta 15523395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 666 - 777
Target Start/End: Complemental strand, 18764062 - 18763951
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||||||||||| ||||||||||| |||| | ||||||||| ||||| | |||||||||| ||||||| |||| |||||||||| ||||||||||    
T  18764062 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgtccttttaaaacagaacaaaatggtcattcaagtatcatttttgttgc 18763963  T
Q  766 atttttcgtcct 777  Q
    ||||||||||||    
T  18763962 atttttcgtcct 18763951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 666 - 789
Target Start/End: Complemental strand, 33110006 - 33109883
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||||||||||| ||| ||||||| |||  | |||||| || || |||| ||||||||||||||||||||||||||||| |||| ||||||||||    
T  33110006 ttaattacacttttggtcctcatgttttggcctgctcacgaaattggtcctgcccttttaaaacataacaaaacggtccttcaattatcatttttgttgc 33109907  T
Q  766 atttttcgtcctaccccccatttt 789  Q
    ||||||||||||||| || |||||    
T  33109906 atttttcgtcctacctcctatttt 33109883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 659 - 823
Target Start/End: Original strand, 11153142 - 11153307
Alignment:
Q  659 aaaaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatctttt 758  Q
    |||||| ||||||| ||||||||| ||||||||||| |||| | || ||| || ||||||| |||||||| | || ||||||||||||||| |||| |||    
T  11153142 aaaaggcttaattatacttttggtcctcgtgttttggcctactcacaaaattggtcatgcccttttaaaatagaataaaacggtccttcaattatcattt 11153241  T
Q  759 ttgttgcatttttcgtcctaccccccatttt-attttccaaaaacgtagagaaatgacagttttag 823  Q
    |||||||||||||||||||||| || ||||| |    ||| ||||| |||||||||||||||||||    
T  11153242 ttgttgcatttttcgtcctacctcctattttcaaaccccagaaacgcagagaaatgacagttttag 11153307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 666 - 789
Target Start/End: Original strand, 2118296 - 2118419
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||||||||||| || |||||||| |||| | |||||| || || |||| ||||||||||||||||||  ||||||||| |||| ||||||||||    
T  2118296 ttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacataacaaaatagtccttcaattatcatttttgttgc 2118395  T
Q  766 atttttcgtcctaccccccatttt 789  Q
    ||||||||||||||| || |||||    
T  2118396 atttttcgtcctacctcctatttt 2118419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 660 - 789
Target Start/End: Complemental strand, 25938219 - 25938090
Alignment:
Q  660 aaaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttt 759  Q
    ||||| ||||||||||||||||| || |||||||| |||| | |||||| || || |||| |||||||||| |||||||| ||||||||| |||| ||||    
T  25938219 aaaggcttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacagtccttcaattatcatttt 25938120  T
Q  760 tgttgcatttttcgtcctaccccccatttt 789  Q
    |||||||||||| |||||||| || |||||    
T  25938119 tgttgcattttttgtcctacctcctatttt 25938090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 666 - 803
Target Start/End: Complemental strand, 44892690 - 44892553
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||| | ||||||| ||||||||||| |||| | |||||| || |  |||| |||||||||| |||||||| ||| ||||| ||| |||||||||||    
T  44892690 ttaattatatttttggtcctcgtgttttgacctactcacgaaaatggttctgccattttaaaacagaacaaaactgtctttcaattatattttttgttgc 44892591  T
Q  766 atttttcgtcctaccccccattttattttccaaaaacg 803  Q
    |||||||||||||||| |||||||||  ||||||||||    
T  44892590 atttttcgtcctaccctccattttatcctccaaaaacg 44892553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 666 - 803
Target Start/End: Original strand, 48293597 - 48293734
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||||||||||| ||||||||||| | || | |||||| ||||| || || ||||||||| |||||||  || |||||| |||| ||||||||||    
T  48293597 ttaattacacttttggtcctcgtgttttggcttactcacgaaattgatcctgtctctttaaaacaaaacaaaattgttcttcaattatcatttttgttgc 48293696  T
Q  766 atttttcgtcctaccccccattttattttccaaaaacg 803  Q
    ||||||| |||| ||| |||||||||| ||||||||||    
T  48293697 atttttcatcctgccctccattttattctccaaaaacg 48293734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 662 - 803
Target Start/End: Complemental strand, 48713892 - 48713751
Alignment:
Q  662 aggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttg 761  Q
    ||||||||||||||||||  ||||||||||||  |||| | | |||| || ||||||  |||||||||| |||||||  ||||||||| |||| ||||||    
T  48713892 aggtttaattacacttttaattctcgtgttttagcctactcatgaaaatggtcatgctcttttaaaacagaacaaaattgtccttcaattatcatttttg 48713793  T
Q  762 ttgcatttttcgtcctaccccccattttattttccaaaaacg 803  Q
    |||||||||||||||| ||| |||||||||  ||||||||||    
T  48713792 ttgcatttttcgtcctcccctccattttatcctccaaaaacg 48713751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 660 - 791
Target Start/End: Original strand, 16690933 - 16691064
Alignment:
Q  660 aaaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttt 759  Q
    ||||||||||||||| ||||||| || ||||||||  ||| | |||||| || || ||||| ||||||||| |||||||   |||||||| |||| ||||    
T  16690933 aaaggtttaattacatttttggtccttgtgttttgatctactcacgaaaatggtcctgcctctttaaaacaaaacaaaattatccttcaattatcatttt 16691032  T
Q  760 tgttgcatttttcgtcctaccccccattttat 791  Q
    |||||||||||||||||||||||| |||||||    
T  16691033 tgttgcatttttcgtcctacccccgattttat 16691064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 657 - 791
Target Start/End: Original strand, 44890511 - 44890645
Alignment:
Q  657 ttaaaaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatctt 756  Q
    |||||| | ||||||||| ||||||| || |||||||| |||||| |||||| || ||||||| |||||||||| |||||||   ||||| || ||| ||    
T  44890511 ttaaaatgcttaattacaattttggtccttgtgttttgacctattcacgaaaatggtcatgcccttttaaaacagaacaaaaatatcctttaattatatt 44890610  T
Q  757 ttttgttgcatttttcgtcctaccccccattttat 791  Q
    |||||||||||||||| || |||||||||||||||    
T  44890611 ttttgttgcatttttcatcataccccccattttat 44890645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 666 - 803
Target Start/End: Complemental strand, 48295085 - 48294947
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||| |||||||  ||||||||||  ||| | |||||| || || ||||| ||||||||| |||||||  ||| ||||| |||| ||||||||||    
T  48295085 ttaattacatttttggtcatcgtgttttgatctactcacgaaattggtcttgcctctttaaaacacaacaaaattgtcattcaattatcatttttgttgc 48294986  T
Q  766 attttt-cgtcctaccccccattttattttccaaaaacg 803  Q
    |||||| |||||||||||||||||||| |||||||||||    
T  48294985 atttttccgtcctaccccccattttatcttccaaaaacg 48294947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 666 - 789
Target Start/End: Complemental strand, 51021337 - 51021215
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||||||||| | ||||||||||| |||| | |||||| || || |||| |||||||||| ||||||||||||||| || ||||  |||||||||    
T  51021337 ttaattacacttttgatcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacacaacaaaacggtcctttaattatc-attttgttgc 51021239  T
Q  766 atttttcgtcctaccccccatttt 789  Q
    ||||||||||||||| || |||||    
T  51021238 atttttcgtcctacctcctatttt 51021215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 684 - 823
Target Start/End: Original strand, 12503457 - 12503597
Alignment:
Q  684 ctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgcatttttcgtcctaccccc 783  Q
    ||||||||||| | || | ||||||||||||  ||| |||||||||| |||||||  ||||||||| |||| ||||||||||||||||||||||||| ||    
T  12503457 ctcgtgttttgacttactcacgaaactgatcccgccattttaaaacagaacaaaattgtccttcaattatcatttttgttgcatttttcgtcctacctcc 12503556  T
Q  784 catttt-attttccaaaaacgtagagaaatgacagttttag 823  Q
     ||||| |   |||| ||||| |||||||| ||||||||||    
T  12503557 tattttcaaactccagaaacgcagagaaattacagttttag 12503597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 684 - 803
Target Start/End: Complemental strand, 43243804 - 43243686
Alignment:
Q  684 ctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgcatttttcgtcctaccccc 783  Q
    ||||||||||| |||| | |||||| || ||||||| |||||||||| |||||||  || |||||| |||| |||||||||||||||| ||||||| |||    
T  43243804 ctcgtgttttggcctactcacgaaaatggtcatgcccttttaaaacagaacaaaattgttcttcaattatcatttttgttgcattttttgtcctac-ccc 43243706  T
Q  784 cattttattttccaaaaacg 803  Q
    ||||||||  ||||||||||    
T  43243705 cattttatcctccaaaaacg 43243686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 684 - 791
Target Start/End: Complemental strand, 43281314 - 43281208
Alignment:
Q  684 ctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgcatttttcgtcctaccccc 783  Q
    ||||||||||| |||| | |||||| || ||||||| |||||||||| |||||||  || |||||| ||| ||||| |||||||||||||||||||||||    
T  43281314 ctcgtgttttggcctactcacgaaaatggtcatgccattttaaaacagaacaaaaatgttcttcaattatattttt-gttgcatttttcgtcctaccccc 43281216  T
Q  784 cattttat 791  Q
    ||||||||    
T  43281215 cattttat 43281208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 666 - 803
Target Start/End: Complemental strand, 20958401 - 20958266
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    |||||||||||||| || ||||| ||||| |||| | |||||| || || |||| |||||||||| ||||||   ||||||||| |||| ||||||||||    
T  20958401 ttaattacacttttagtcctcgtattttggcctactcacgaaaatggtcctgcccttttaaaacagaacaaatatgtccttcaattatcatttttgttgc 20958302  T
Q  766 atttttcgtcctaccccccattttattttccaaaaacg 803  Q
    |||||| |||||| ||||||||||||  ||||||||||    
T  20958301 attttt-gtccta-cccccattttatcctccaaaaacg 20958266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 718 - 803
Target Start/End: Original strand, 43242325 - 43242410
Alignment:
Q  718 cctttttaaaacataacaaaacggtccttcaagtatcttttttgttgcatttttcgtcctaccccccattttattttccaaaaacg 803  Q
    ||||||||||||| |||||||||||| ||||| |||| ||||| ||||||||||||||||||| || |||||||  ||||||||||    
T  43242325 cctttttaaaacagaacaaaacggtcattcaattatcattttttttgcatttttcgtcctacctccaattttatcatccaaaaacg 43242410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 666 - 791
Target Start/End: Original strand, 48708298 - 48708423
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||||||||||| |  |||||||| ||||   |||||| ||||| |||| |||||||||| |||||||| ||||||||| |||| ||||||||||    
T  48708298 ttaattacacttttggtccatgtgttttggcctaaccacgaaaatgatcctgcccttttaaaacacaacaaaactgtccttcaattatcatttttgttgc 48708397  T
Q  766 atttttcgtcctaccccccattttat 791  Q
    |||| |  ||||||| | ||||||||    
T  48708398 atttataatcctaccactcattttat 48708423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 772 - 839
Target Start/End: Complemental strand, 18752038 - 18751971
Alignment:
Q  772 cgtcctaccccccattttattttccaaaaacgtagagaaatgacagttttagacctaccccctatgct 839  Q
    |||||||||||| |||||||| |||||||| | |||||||| ||||||||||||||||||||||||||    
T  18752038 cgtcctaccccctattttattctccaaaaatgcagagaaataacagttttagacctaccccctatgct 18751971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 666 - 780
Target Start/End: Complemental strand, 35363143 - 35363028
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgc-ctttttaaaacataacaaaacggtccttcaagtatcttttttgttg 764  Q
    ||||||||||||||| | ||||||||||| |||| | ||||||||| |  ||| ||||| |||| | |||||||||||| ||||| |||| |||||||||    
T  35363143 ttaattacacttttgatcctcgtgttttggcctactcacgaaactggttctgctcttttaaaaaaaaaacaaaacggtcattcaattatcatttttgttg 35363044  T
Q  765 catttttcgtcctacc 780  Q
    |||||||||| |||||    
T  35363043 catttttcgttctacc 35363028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 670 - 801
Target Start/End: Original strand, 20957196 - 20957327
Alignment:
Q  670 ttacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgcattt 769  Q
    ||||| ||||||| |||| |||||| | || | |||||| || |||| |  |||||||||| |||||||  ||||||||| ||||  |||||||||||||    
T  20957196 ttacatttttggtcctcgagttttggcttactcacgaaaatggtcatactcttttaaaacacaacaaaattgtccttcaattatcaattttgttgcattt 20957295  T
Q  770 ttcgtcctaccccccattttattttccaaaaa 801  Q
    |||||| ||| |||||||||||| || |||||    
T  20957296 ttcgtcatactccccattttattctcaaaaaa 20957327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 666 - 791
Target Start/End: Complemental strand, 16691613 - 16691489
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||||||||| | |  |||||||| |||| | |||||| || || ||||| |||||| ||||||||||  |||||| || |||  ||||||||||    
T  16691613 ttaattacacttttgatccctgtgttttgacctactcacgaaaatggtcctgcctctttaaa-cataacaaaattgtcctttaattattatttttgttgc 16691515  T
Q  766 atttttcgtcctaccccccattttat 791  Q
    |||||||||| |||| ||||||||||    
T  16691514 atttttcgtcatacctcccattttat 16691489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 794 - 839
Target Start/End: Original strand, 17504104 - 17504149
Alignment:
Q  794 tccaaaaacgtagagaaatgacagttttagacctaccccctatgct 839  Q
    |||| |||||||||||||||||||||||||||||||||||||||||    
T  17504104 tccagaaacgtagagaaatgacagttttagacctaccccctatgct 17504149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 661 - 730
Target Start/End: Complemental strand, 16318323 - 16318254
Alignment:
Q  661 aaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaaca 730  Q
    |||| ||||||||||||||||| ||||||||||| |||| | || ||||||||| |||| ||||||||||    
T  16318323 aaggcttaattacacttttggtcctcgtgttttggcctactcacaaaactgatcctgcccttttaaaaca 16318254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 799 - 839
Target Start/End: Complemental strand, 17504369 - 17504329
Alignment:
Q  799 aaacgtagagaaatgacagttttagacctaccccctatgct 839  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  17504369 aaacgcagagaaatgacagttttagacctaccccctatgct 17504329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 799 - 839
Target Start/End: Original strand, 35193443 - 35193483
Alignment:
Q  799 aaacgtagagaaatgacagttttagacctaccccctatgct 839  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  35193443 aaacgcagagaaatgacagttttagacctaccccctatgct 35193483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 806 - 839
Target Start/End: Original strand, 40160236 - 40160269
Alignment:
Q  806 gagaaatgacagttttagacctaccccctatgct 839  Q
    ||||||||||||||||||||||||||||||||||    
T  40160236 gagaaatgacagttttagacctaccccctatgct 40160269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 661 - 789
Target Start/End: Complemental strand, 10258434 - 10258306
Alignment:
Q  661 aaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatctttttt 760  Q
    |||| ||||||||||||||||| |||||||| || |||| | | |||| || || |||| |||||||||| |  ||||  ||  ||||| |||| |||||    
T  10258434 aaggcttaattacacttttggtcctcgtgttgtggcctactcaggaaattggtcctgcccttttaaaacagattaaaattgtttttcaattatcattttt 10258335  T
Q  761 gttgcatttttcgtcctaccccccatttt 789  Q
    |||||| |||| ||| ||||||| |||||    
T  10258334 gttgcagttttagtcttaccccctatttt 10258306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 114; Significance: 2e-57; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 666 - 839
Target Start/End: Complemental strand, 134215 - 134042
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||||||||||| ||||||||||| |||| | ||||||||  ||||||| |||||| ||| ||||||||| |||||||| || | ||||||||||    
T  134215 ttaattacacttttggtcctcgtgttttggcctactcacgaaactagtcatgcccttttaatacagaacaaaacgatccttcaattaacatttttgttgc 134116  T
Q  766 atttttcgtcctaccccccattttattttccaaaaacgtagagaaatgacagttttagacctaccccctatgct 839  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||    
T  134115 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 134042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0951 (Bit Score: 112; Significance: 4e-56; HSPs: 2)
Name: scaffold0951
Description:

Target: scaffold0951; HSP #1
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 666 - 837
Target Start/End: Original strand, 1670 - 1841
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||||||||||| ||| ||||||| |||| | ||||||||| || |||| |||||||||| ||||||| | |||||||| |||| ||||||||||    
T  1670 ttaattacacttttggtcctcctgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatgttccttcaattatcatttttgttgc 1769  T
Q  766 atttttcgtcctaccccccattttattttccaaaaacgtagagaaatgacagttttagacctaccccctatg 837  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||    
T  1770 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatg 1841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0951; HSP #2
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 666 - 823
Target Start/End: Complemental strand, 2209 - 2051
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||||||||||| ||||||||||| |||| ||||||||||| || |||| |||||||||| |||||||||||| ||||| |||| ||||||||||    
T  2209 ttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 2110  T
Q  766 atttttcgtcctaccccccatttt-attttccaaaaacgtagagaaatgacagttttag 823  Q
    ||||||||||||||| || ||||| |   |||| ||||| |||||||||| ||||||||    
T  2109 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgaaagttttag 2051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 110; Significance: 6e-55; HSPs: 2)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 110; E-Value: 6e-55
Query Start/End: Original strand, 666 - 839
Target Start/End: Complemental strand, 4749 - 4576
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    |||||||||||||||||  |||||||||| | || | ||||||||| || |||| |||||||||| ||||||||||||||| || |||| ||||||||||    
T  4749 ttaattacacttttggtcttcgtgttttggcatactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcctttaattatcatttttgttgc 4650  T
Q  766 atttttcgtcctaccccccattttattttccaaaaacgtagagaaatgacagttttagacctaccccctatgct 839  Q
    ||||||||||||||||||||||||||| |||||||||  |||||||||||||||||||||||||||||||||||    
T  4649 atttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatgct 4576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 703 - 823
Target Start/End: Original strand, 4243 - 4364
Alignment:
Q  703 acgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgcatttttcgtcctaccccccatttt-attttccaaaaa 801  Q
    ||||||||| || |||| |||||||||| |||||||||||||||||| |||| ||||||||||||||||||| ||||| || ||||| |   || |||||    
T  4243 acgaaactggtcctgcccttttaaaacaaaacaaaacggtccttcaattatcatttttgttgcatttttcgttctacctcctattttcaaactctaaaaa 4342  T
Q  802 cgtagagaaatgacagttttag 823  Q
     | |||||||||||||||||||    
T  4343 tgcagagaaatgacagttttag 4364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1223 (Bit Score: 98; Significance: 8e-48; HSPs: 2)
Name: scaffold1223
Description:

Target: scaffold1223; HSP #1
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 666 - 839
Target Start/End: Original strand, 756 - 928
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    |||||||||||||||||  |||||||||| |||| | |||| |||| || |||| |||||||||| |||||||||||||||||| |||| |||| |||||    
T  756 ttaattacacttttggtcttcgtgttttggcctactcacgatactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt-gttgc 854  T
Q  766 atttttcgtcctaccccccattttattttccaaaaacgtagagaaatgacagttttagacctaccccctatgct 839  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||| |||||||||||| |||||| ||||||    
T  855 atttttcgtcctaccccccattttattctccaaaaacgcagagaaataacagttttagacataccccttatgct 928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1223; HSP #2
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 666 - 789
Target Start/End: Complemental strand, 1283 - 1160
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    |||||||||||||| || ||||||||||| | || | ||||||||| || |||| |||||||||| |||||||||||||||||| |||| ||||||||||    
T  1283 ttaattacacttttagtcctcgtgttttggcttactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 1184  T
Q  766 atttttcgtcctaccccccatttt 789  Q
    || |||||||||||| || |||||    
T  1183 atctttcgtcctacctcctatttt 1160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 96; Significance: 1e-46; HSPs: 2)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 684 - 839
Target Start/End: Original strand, 10642 - 10797
Alignment:
Q  684 ctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgcatttttcgtcctaccccc 783  Q
    ||||||||||| |||| | | ||||||| || |||| |||||||||| ||||||||||||||||||||||| |||| ||||||||||||||||||||| |    
T  10642 ctcgtgttttggcctactcatgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaagtatcattttcgttgcatttttcgtcctaccctc 10741  T
Q  784 cattttattttccaaaaacgtagagaaatgacagttttagacctaccccctatgct 839  Q
    ||||||||| |||||||| | ||||||||||||||||||||| |||||||||||||    
T  10742 cattttattctccaaaaatgcagagaaatgacagttttagacgtaccccctatgct 10797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417; HSP #2
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 666 - 789
Target Start/End: Complemental strand, 11165 - 11042
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||||||||||| ||||||||||| |||| ||||||||||| || |||| ||||||||||||||||||||||||||||| |||| ||||||||||    
T  11165 ttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacataacaaaacggtccttcaattatcatttttgttgc 11066  T
Q  766 atttttcgtcctaccccccatttt 789  Q
    ||||||||||||||| || |||||    
T  11065 atttttcgtcctacctcctatttt 11042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 95; Significance: 5e-46; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 666 - 839
Target Start/End: Complemental strand, 42700 - 42528
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||| ||||||||  |||||||||||  ||| | | |||||||||  |||| |||||||||| |||||||||||||||||  |||| |||||||| |    
T  42700 ttaattatacttttggncctcgtgttttggtctactcaggaaactgattctgcccttttaaaacagaacaaaacggtccttcagttatcatttttgtttc 42601  T
Q  766 atttttcgtcctaccccccattttattttccaaaaacgtagagaaatgacagttttagacctaccccctatgct 839  Q
    |||||||||||||| |||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||    
T  42600 atttttcgtcctac-ccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 42528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #2
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 661 - 832
Target Start/End: Original strand, 42167 - 42339
Alignment:
Q  661 aaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatctttttt 760  Q
    ||||||||||||||||||| ||||||||||||||  ||| | |||||||||||| |||| |||||||||| |||||||||||| ||||| |||| |||||    
T  42167 aaggtttaattacacttttagttctcgtgttttggtctaatcacgaaactgatcctgccattttaaaacagaacaaaacggtcattcaattatcattttt 42266  T
Q  761 gttgcatttttcgtcctaccccccatttt-attttccaaaaacgtagagaaatgacagttttagacctacccc 832  Q
    ||||||||||| ||| |||| || ||||| |   | || ||||| ||||||||||||||||||||||||||||    
T  42267 gttgcattttttgtcatacctcctattttcaaacttcagaaacgcagagaaatgacagttttagacctacccc 42339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432 (Bit Score: 94; Significance: 2e-45; HSPs: 2)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 666 - 839
Target Start/End: Complemental strand, 10414 - 10242
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||||||||||| |||||||||||  ||| | ||||||||| |  | || |||||||||| |||||||||||||||||| |||| ||||||||||    
T  10414 ttaattacacttttggtcctcgtgttttggtctactcacgaaactggtgtttcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 10315  T
Q  766 atttttcgtcctaccccccattttattttccaaaaacgtagagaaatgacagttttagacctaccccctatgct 839  Q
    |||||||||||||| |||||||||||| ||||||||   |||||||||||||||||| ||||||||||||||||    
T  10314 atttttcgtcctac-ccccattttattctccaaaaattcagagaaatgacagttttaaacctaccccctatgct 10242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432; HSP #2
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 659 - 770
Target Start/End: Original strand, 9928 - 10039
Alignment:
Q  659 aaaaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatctttt 758  Q
    ||||| |||||||||| ||||||| ||||||||||  |||||| |||||||||||| |||| |||||| | | ||||||| |||||||||| ||||  ||    
T  9928 aaaagatttaattacatttttggtcctcgtgttttagcctattcacgaaactgatcttgcccttttaagatagaacaaaatggtccttcaattatcaatt 10027  T
Q  759 ttgttgcatttt 770  Q
    ||||| ||||||    
T  10028 ttgttacatttt 10039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 92; Significance: 3e-44; HSPs: 2)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 732 - 839
Target Start/End: Original strand, 16565 - 16672
Alignment:
Q  732 aacaaaacggtccttcaagtatcttttttgttgcatttttcgtcctaccccccattttattttccaaaaacgtagagaaatgacagttttagacctaccc 831  Q
    ||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||| |||||||||| |||||||||||||||||||||||||||    
T  16565 aacaaaacggtccttcaagtatcatttttgttgcatttttcgtcataccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 16664  T
Q  832 cctatgct 839  Q
    ||||||||    
T  16665 cctatgct 16672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157; HSP #2
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 684 - 823
Target Start/End: Complemental strand, 17020 - 16880
Alignment:
Q  684 ctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgcatttttcgtcctaccccc 783  Q
    ||||||||||| | || | ||||||||||||  ||| |||||||||| |||||||  ||||||||| |||| ||||||||||||||||||||||||| ||    
T  17020 ctcgtgttttgacttactcacgaaactgatcccgccattttaaaacagaacaaaattgtccttcaattatcatttttgttgcatttttcgtcctacctcc 16921  T
Q  784 catttt-attttccaaaaacgtagagaaatgacagttttag 823  Q
     ||||| |   |||| ||||| |||||||| ||||||||||    
T  16920 tattttcaaactccagaaacgcagagaaattacagttttag 16880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 87; Significance: 3e-41; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 660 - 830
Target Start/End: Original strand, 18832 - 19001
Alignment:
Q  660 aaaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttt 759  Q
    ||||| || |||||||||||||| ||  ||||||| |||| | ||||||||| || |||| |||||||||||||||||||||| |||||| |||| ||||    
T  18832 aaaggcttcattacacttttggtccttctgttttggcctactcacgaaactggtcttgcccttttaaaacataacaaaacggtgcttcaattatcatttt 18931  T
Q  760 tgttgcatttttcgtcctaccccccattttattttccaaaaacgtagagaaatgacagttttagacctacc 830  Q
    ||||||||||||| ||||| ||||||||||||| |||||||||| |||||||| |||||||||||| ||||    
T  18932 tgttgcatttttcatccta-cccccattttattctccaaaaacgcagagaaataacagttttagacttacc 19001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 666 - 760
Target Start/End: Complemental strand, 19163 - 19069
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatctttttt 760  Q
    ||||||||||||||||| ||||||||||| |||| | ||||||||  || |||| |||||||||| |||||||||||||||||| |||| |||||    
T  19163 ttaattacacttttggtcctcgtgttttggcctactcacgaaacttgtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 19069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 76; Significance: 1e-34; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 658 - 789
Target Start/End: Complemental strand, 28793 - 28662
Alignment:
Q  658 taaaaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttt 757  Q
    |||||||  ||||||||||||||||  |||||||||| |||| ||||||||||| ||||||| |||||||||| |||||||||||| ||||| |||| ||    
T  28793 taaaaggcataattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaacggtcattcaattatcatt 28694  T
Q  758 tttgttgcatttttcgtcctaccccccatttt 789  Q
    ||||||||| |||||||||| |||||||||||    
T  28693 tttgttgcagttttcgtccttccccccatttt 28662  T

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Target: scaffold1585 (Bit Score: 66; Significance: 1e-28; HSPs: 1)
Name: scaffold1585
Description:

Target: scaffold1585; HSP #1
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 666 - 803
Target Start/End: Original strand, 570 - 707
Alignment:
Q  666 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 765  Q
    ||||||||||||||| | ||||||||||| |||| | |||||| |||||||||| |||||||||| |||||||| ||||||||| |||| |||||||||     
T  570 ttaattacacttttgatcctcgtgttttggcctactcacgaaaatgatcatgcccttttaaaacagaacaaaactgtccttcaattatcatttttgttgt 669  T
Q  766 atttttcgtcctaccccccattttattttccaaaaacg 803  Q
    ||||||||||  ||| ||||||| ||  ||||||||||    
T  670 atttttcgtctcacctcccatttgatcctccaaaaacg 707  T

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Target: scaffold0076 (Bit Score: 51; Significance: 9e-20; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 656 - 766
Target Start/End: Complemental strand, 8561 - 8451
Alignment:
Q  656 tttaaaaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatct 755  Q
    |||||| ||||||||||||||||||||  || |||||||  ||| ||||||||||| || | || |||||||||| | |||||||||||||||| ||||     
T  8561 tttaaatggtttaattacacttttggtcttcatgttttggtctacttacgaaactggtcctacccttttaaaacacagcaaaacggtccttcaattatca 8462  T
Q  756 tttttgttgca 766  Q
    |||||||||||    
T  8461 tttttgttgca 8451  T

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Target: scaffold0168 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 721 - 803
Target Start/End: Complemental strand, 7775 - 7693
Alignment:
Q  721 ttttaaaacataacaaaacggtccttcaagtatcttttttgttgcatttttcgtcctaccccccattttattttccaaaaacg 803  Q
    |||||||||| |||||||| ||| ||||  |||| |||||||||||||||||||||||||||| |||||||  ||||||||||    
T  7775 ttttaaaacagaacaaaactgtcgttcagttatcatttttgttgcatttttcgtcctaccccctattttatcctccaaaaacg 7693  T

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Target: scaffold0057 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 664 - 803
Target Start/End: Complemental strand, 62002 - 61863
Alignment:
Q  664 gtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgtt 763  Q
    ||||||||||||||||| | |||||||||||  ||| | |||||| || || | || |||||||| | |||||||   || ||||| |||| ||||||||    
T  62002 gtttaattacacttttgatcctcgtgttttggtctactcacgaaaatggtcctacccttttaaaatagaacaaaatcatcattcaaatatcatttttgtt 61903  T
Q  764 gcatttttcgtcctaccccccattttattttccaaaaacg 803  Q
      |||||||||||||||||||||||| |  ||||||||||    
T  61902 atatttttcgtcctaccccccattttgtcctccaaaaacg 61863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1696 (Bit Score: 41; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold1696
Description:

Target: scaffold1696; HSP #1
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 667 - 779
Target Start/End: Original strand, 454 - 565
Alignment:
Q  667 taattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgca 766  Q
    |||||||| |||||||  |||||||||| |||| | |||||| || |||||   |||||||||| |||| ||  ||||||||| |||| |||||||||||    
T  454 taattaca-ttttggtcttcgtgttttggcctactcacgaaaatggtcatgatcttttaaaacaaaacataatcgtccttcaattatcatttttgttgca 552  T
Q  767 tttttcgtcctac 779  Q
    |||||||||||||    
T  553 tttttcgtcctac 565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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