View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF11254_low_1 (Length: 1036)
Name: NF11254_low_1
Description: NF11254
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11254_low_1 |
 | |
|
Alignment Details
Target: chr6 (Bit Score: 800; Significance: 0; HSPs: 15)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 800; E-Value: 0
Query Start/End: Original strand, 14 - 965
Target Start/End: Complemental strand, 30945315 - 30944364
Alignment:
| Q |
14 |
atggacatcactatgtcaggtctcaaatcactctccttttctagcttattgtatatccaatctggaaaatactcgctagtttgatttgtgttaacatcaa |
113 |
Q |
| |
|
|||| |||||||||||||| |||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
30945315 |
atggccatcactatgtcagatctcaaatcactatccgtttctagcttattgtatatccaatctggaaaatactcgctagtttgatttgttttaacatcaa |
30945216 |
T |
|
| Q |
114 |
tattgtttctcactccgaccatctctaaaagcatcattccataactataaacatcagacttgtgtgaaactcctccaaattgtctattccatacttctgg |
213 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30945215 |
tattgtttctcactcccaccatctctaaaagcatcattccataactataaacatcagacttgtgtgaaactcctccaaattgtctattccatacttctgg |
30945116 |
T |
|
| Q |
214 |
agctacatatccgactgttcctcttgcatttgacatgaatatagtgctctctttctcgagacagagctttgcaagtccaaaatctgaaatctttggacat |
313 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30945115 |
agctacatatccgactgttcctcttgcatttgacatgaaaatagtgctctctttcttgagacagagctttgcaagtccaaaatctgaaatctttggacat |
30945016 |
T |
|
| Q |
314 |
aaattttcatctaaaagaatgttatgtggttttatatcaaaatgtaaaatccgggtattacatcccctatgcaaatactccaaacctcgagctatccctt |
413 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||| |||||||||||||||||| ||||||| |||||||||||||||||||||| |||||||||||||| |
|
|
| T |
30945015 |
aaattttcatctaaaagaatgttatgcggttttatgtcaaaatgtaaaatccggatattacaccccctatgcaaatactccaaacttcgagctatccctt |
30944916 |
T |
|
| Q |
414 |
tggcaatttgatacaaattatcccaactcaaagatgcaatggtttcaggtccctcattgtaaataaatttgtcaagggaaccattagacataaattcata |
513 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30944915 |
tggcaatttgatacaaattatcccaacttaaagatgcaatggtttcaggtcccttattgtaaataaatttgtcaagggaaccattagacataaattcata |
30944816 |
T |
|
| Q |
514 |
tatgagagctttgttgcaaccttcaaaacaaaatccaagaagggtaacaacattaacatgtgaggttctagtaatactagcaacctcattaataaattct |
613 |
Q |
| |
|
|| ||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| |
|
|
| T |
30944815 |
tacgagagctttattacaaccttcaaaacaaaatccaagaagggtaacaacattaacatgtgaggttctagtaatactagtaacctcattaataaagtct |
30944716 |
T |
|
| Q |
614 |
tcaccatttccttttgatgcatttagcatcttcactgccacaagggaaccattcactagctctcctttgtacacagcaccaaaacccccttgaccaagtt |
713 |
Q |
| |
|
|||||| ||||||| |||||||| | ||||||||||| ||||| |||||||| | || || |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30944715 |
tcaccaattcctttcgatgcattcaaaatcttcactgctacaagagaaccattgaataactttcctttgtacacagcaccaaaacccccttgaccaagtt |
30944616 |
T |
|
| Q |
714 |
taattttgaatgagtttgtcattttctttatttctgaaaatttatatcttttttgtaatagtgctctatgatcttttaaaaattcttcaacgtttatatc |
813 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
30944615 |
taattttgaatgagtttgtcattttctttatttctgaaaatttatatcttttttgtaatagtgctctatgatcttttaaaaattcttcaatgtttatatc |
30944516 |
T |
|
| Q |
814 |
attctttgtcttaaaccaaaattctacatgtagtaccgatgacttgcttctataacaacagattatgatgcacatcagcaatgctattattgctgcactt |
913 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| | ||||||| ||||| |
|
|
| T |
30944515 |
attctttgtcttaaaccaaaattttacatgtagtatcgatgacttgcctctataacaacagattatgatgcacatcagcaatgcaactattgctacactt |
30944416 |
T |
|
| Q |
914 |
ccaacacctgtttttataatgagaaaattttcttattatatgctgatggaag |
965 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30944415 |
ccaacacctgtttttataatgagaaaattttcttattatatgctgatggaag |
30944364 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 782; E-Value: 0
Query Start/End: Original strand, 14 - 962
Target Start/End: Complemental strand, 30955575 - 30954629
Alignment:
| Q |
14 |
atggacatcactatgtcaggtctcaaatcactctccttttctagcttattgtatatccaatctggaaaatactcgctagtttgatttgtgttaacatcaa |
113 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
30955575 |
atggccatcactatgtcaggtctcaaatcactctccttttctagcttattgtatatccaatctggaaaatactcgctagtttgatttgtattaacatcaa |
30955476 |
T |
|
| Q |
114 |
tattgtttctcactccgaccatctctaaaagcatcattccataactataaacatcagacttgtgtgaaactcctccaaattgtctattccatacttctgg |
213 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30955475 |
tattgtttctcactccaaccatctctaaaagcatcattccataactataaacatcagacttgtgtgaaactcctccaaattgtctattccatacttctgg |
30955376 |
T |
|
| Q |
214 |
agctacatatccgactgttcctcttgcatttgacatgaatatagtgctctctttctcgagacagagctttgcaagtccaaaatctgaaatctttggacat |
313 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30955375 |
agctacatatccgactgttcctcttgcatttgacatgaatatagtgctctctttctcgagacagagctttgcaagtccaaaatctgaaatctttggacat |
30955276 |
T |
|
| Q |
314 |
aaattttcatctaaaagaatgttatgtggttttatatcaaaatgtaaaatccgggtattacatcccctatgcaaatactccaaacctcgagctatccctt |
413 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30955275 |
aaattttcatctaaaagaatgttatgtggttttatatcaaaatgtaaaatccgggtattacatcccctatgcaaatactccaaacctcgagctatccctt |
30955176 |
T |
|
| Q |
414 |
tggcaatttgatacaaattatcccaactcaaagatgcaatggtttcaggtccctcattgtaaataaatttgtcaagggaaccattagacataaattcata |
513 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30955175 |
tggcaatttgatagaaattatcccaactcaaagatgcaatggtttcaggtcccttattgtaaataaatttgtcaagggaaccattagacataaattcata |
30955076 |
T |
|
| Q |
514 |
tatgagagctttgttgcaaccttcaaaacaaaatccaagaagggtaacaacattaacatgtgaggttctagtaatactagcaacctcattaataaattct |
613 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
30955075 |
tatgagagctttattgcaaccttcaaaacaaaatccaagaagggtaacaacattaacatgtgaggttctagtaatactagtaacctcattaataaattct |
30954976 |
T |
|
| Q |
614 |
tcaccatttccttttgatgcatttagcatcttcactgccacaagggaaccattcactagctctcctttgtacacagcaccaaaacccccttgaccaagtt |
713 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
30954975 |
tcaccatttccttttgatgcatttagcatcttcactgccacaagggaaccattcactagctttcctttgtacacagcaccgaaacccccttgaccaagtt |
30954876 |
T |
|
| Q |
714 |
taattttgaatgagtttgtcattttctttatttctgaaaatttatatcttttttgtaatagtgctctatgatcttttaaaaattcttcaacgtttatatc |
813 |
Q |
| |
|
||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| | ||| |||| ||| |||||||||||| |||||| ||||||||| |
|
|
| T |
30954875 |
taattttgaatgaatttgttattttctttatttctgaaaatttatatcttttttgcactagagctccatggtcttttaaaaatgcttcaatgtttatatc |
30954776 |
T |
|
| Q |
814 |
attctttgtcttaaaccaaaattctacatgtagtaccgatgacttgcttctataacaacagattatgatgcacatcagcaatgctattattgctgcactt |
913 |
Q |
| |
|
|||||||||||||||| ||| | || ||||||| | |||||| || | |||| ||||| ||||||||||||||||||||||||| ||||||||| || |
|
|
| T |
30954775 |
attctttgtcttaaacagaaacttcacttgtagtatcaatgactcgcctttataccaacaaattatgatgcacatcagcaatgctaccattgctgcaatt |
30954676 |
T |
|
| Q |
914 |
ccaacacctgtttttataatgagaaaattttcttattatatgctgatgg |
962 |
Q |
| |
|
|||||||||||| ||||||| || |||| ||||||| | ||||||||| |
|
|
| T |
30954675 |
ccaacacctgttgttataataag--aattatcttattttgtgctgatgg |
30954629 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 478; E-Value: 0
Query Start/End: Original strand, 131 - 965
Target Start/End: Complemental strand, 30992685 - 30991856
Alignment:
| Q |
131 |
accatctctaaaagcatcattccataactataaacatcagacttgtgtgaaactcctccaaattgtctattccatacttctggagctacatatccgactg |
230 |
Q |
| |
|
||||| ||||| | |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| || | || |
|
|
| T |
30992685 |
accatttctaacaacatcattccataactataaacatcagacttgtgtgaaactcctccaaaatgtctattccacacttctggagctacataccccattg |
30992586 |
T |
|
| Q |
231 |
ttcctcttgcatttgacatgaatatagtgctctctttctcgagacagagctttgcaagtccaaaatctgaaatctttggacataaattttcatctaaaag |
330 |
Q |
| |
|
| |||||| || ||||| | | | |||| ||||||| || || |||||||| |||||||||||||| ||||||||||| ||||| ||||||||||| |
|
|
| T |
30992585 |
tccctctttgatccgacatcgaaacaatgctgtctttcttcaggcaaagctttgccagtccaaaatctgagatctttggacaaaaattctcatctaaaag |
30992486 |
T |
|
| Q |
331 |
aatgttatgtggttttatatcaaaatgtaaaatccgggtattacatcccctatgcaaatactccaaacctcgagctatccctttggcaatttgatacaaa |
430 |
Q |
| |
|
|||||||||||||||||| |||||||||||||| || || |||||| ||||||||||| || | || || ||||||||||| |||||||||| || | |
|
|
| T |
30992485 |
aatgttatgtggttttatgtcaaaatgtaaaattcgagtggcacatcctctatgcaaatattctagcccacgggctatccctttcgcaatttgatgcata |
30992386 |
T |
|
| Q |
431 |
ttatcccaactcaaagatgcaatggtttcaggtccctcattgtaaataaatttgtcaagggaaccattagacataaattcatatatgagagctttgttgc |
530 |
Q |
| |
|
||||||||||| ||||||||||| ||||||||| ||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| || | |
|
|
| T |
30992385 |
ttatcccaacttaaagatgcaatcgtttcaggttccttattgtatataaatttgtcaagggaaccattagacataaattcatatatgagagctttattac |
30992286 |
T |
|
| Q |
531 |
aaccttcaaaacaaaatccaagaagggtaacaacattaacatgtgaggttctagtaatactagcaacctcattaataaattcttcaccatttccttttga |
630 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
30992285 |
aaccttcaaaacaaaatccaagaaggttaacaacattaacatgtgaggttctagtaatactagcaacctcattaataaagtcttcaccatttccttttga |
30992186 |
T |
|
| Q |
631 |
tgcatttagcatcttcactgccacaagggaaccattcactagctctcctttgtacacagcaccaaaacccccttgaccaagtttaattttgaatgagttt |
730 |
Q |
| |
|
|||||||| ||||||||||| ||||| |||||||| | || || |||||||||||| |||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
30992185 |
tgcatttaatatcttcactgctacaagagaaccattgaataactttcctttgtacaccgcaccaaaacccccttgaccaactttaattttgaatgagttt |
30992086 |
T |
|
| Q |
731 |
gtcattttctttatttctgaaaatttatatcttttttgtaatagtgctctatgatcttttaaaaattcttcaacgtttatatcattctttgtcttaaacc |
830 |
Q |
| |
|
|| |||||||||||||||||||| |||||||||||||| ||||| ||| ||| |||||||||||| |||||| |||||||||||||||||||||||||| |
|
|
| T |
30992085 |
gtaattttctttatttctgaaaacttatatcttttttgcaatagaactccatggtcttttaaaaatgcttcaatgtttatatcattctttgtcttaaacc |
30991986 |
T |
|
| Q |
831 |
aaaattctacatgtagtaccgatgacttgcttctataacaacagattatgatgcacatcagcaatgctattattgctgcacttccaacacctgtttttat |
930 |
Q |
| |
|
|||||| ||| ||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| | ||| |
|
|
| T |
30991985 |
aaaattttac---tagtatcgatgacttgcctctataacaacagattatgatgcacatcagcaatgctaccattgctgcacttccaacacctgctgttag |
30991889 |
T |
|
| Q |
931 |
aatgagaaaattttcttattatatgctgatggaag |
965 |
Q |
| |
|
||| || |||| |||||||| |||||||||||| |
|
|
| T |
30991888 |
aataag--aattatcttattaagtgctgatggaag |
30991856 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 395; E-Value: 0
Query Start/End: Original strand, 131 - 965
Target Start/End: Complemental strand, 30961203 - 30960369
Alignment:
| Q |
131 |
accatctctaaaagcatcattccataactataaacatcagacttgtgtgaaactcctccaaattgtctattccatacttctggagctacatatccgactg |
230 |
Q |
| |
|
||||| ||||| | |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||||||||| || | || |
|
|
| T |
30961203 |
accatttctaacaacatcattccataactataaacatcagacttgtgtgaaactcctccaaaatgtctattccacacttcaggagctacataccccattg |
30961104 |
T |
|
| Q |
231 |
ttcctcttgcatttgacatgaatatagtgctctctttctcgagacagagctttgcaagtccaaaatctgaaatctttggacataaattttcatctaaaag |
330 |
Q |
| |
|
| |||||| || ||||| | | | |||| ||||||| || || |||||||| |||||||||||||| ||||||||||| ||||| ||||||||||| |
|
|
| T |
30961103 |
tccctctttgatccgacatcgaaacaatgctgtctttcttcaggcaaagctttgccagtccaaaatctgagatctttggacaaaaattctcatctaaaag |
30961004 |
T |
|
| Q |
331 |
aatgttatgtggttttatatcaaaatgtaaaatccgggtattacatcccctatgcaaatactccaaacctcgagctatccctttggcaatttgatacaaa |
430 |
Q |
| |
|
|||||||||||||||||| |||||||||||||| || ||| |||||| ||||||||||| || | || || ||||||||||| |||||||||| || | |
|
|
| T |
30961003 |
aatgttatgtggttttatgtcaaaatgtaaaattcgagtagcacatcctctatgcaaatattctagcccacgggctatccctttcgcaatttgatgcata |
30960904 |
T |
|
| Q |
431 |
ttatcccaactcaaagatgcaatggtttcaggtccctcattgtaaataaatttgtcaagggaaccattagacataaattcatatatgagagctttgttgc |
530 |
Q |
| |
|
| ||||||||| |||||| |||||||||||||||||| |||||||||| |||||||||| |||||||| |||||||||||||||| |||||||| || | |
|
|
| T |
30960903 |
tcatcccaacttaaagatacaatggtttcaggtcccttattgtaaatatatttgtcaagagaaccattggacataaattcatatacaagagcttttttac |
30960804 |
T |
|
| Q |
531 |
aaccttcaaaacaaaatccaagaagggtaacaacattaacatgtgaggttctagtaatactagcaacctcattaataaattcttcaccatttccttttga |
630 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| |
|
|
| T |
30960803 |
ggccttcaaaacaaaatccaagaagggtgacaacattaacatgtgaggttctagtaatactagcaacctcgttaataaattcttcaccgtttccttttga |
30960704 |
T |
|
| Q |
631 |
tgcatttagcatcttcactgccacaagggaaccattcactagctctcctttgtacacagcaccaaaacccccttgaccaagtttaattttgaatgagttt |
730 |
Q |
| |
|
|||||| | ||||||||||||||| | ||||||||| || || ||||||||| ||| ||||||| |||||||||||||||||||||||||| |||||| |
|
|
| T |
30960703 |
tgcattcaaaatcttcactgccacatgacaaccattcaataactttcctttgtagacaacaccaaatcccccttgaccaagtttaattttgaacgagttt |
30960604 |
T |
|
| Q |
731 |
gtcattttctttatttctgaaaatttatatcttttttgtaatagtgctctatgatcttttaaaaattcttcaacgtttatatcattctttgtcttaaacc |
830 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| | ||| |||| ||||||||||| |||| |||||| |||||||||||| ||||||||| | |
|
|
| T |
30960603 |
gtcattttctttatttctgaaaatttatatcttttttgcagtagagctccatgatcttttagaaatgcttcaatgtttatatcattatttgtcttagatg |
30960504 |
T |
|
| Q |
831 |
aaaattctacatgtagtaccgatgacttgcttctataacaacagattatgatgcacatcagcaatgctattattgctgcacttccaacacctgtttttat |
930 |
Q |
| |
|
||||| ||| ||||| | |||| ||||| |||| ||||| | |||||||||| ||| |||| | | |||||||||||||||||||||||| ||| |
|
|
| T |
30960503 |
gaaattttacttgtagcatagatggcttgcctctaaaacaataaattatgatgcccattagcagggttgccattgctgcacttccaacacctgttgttag |
30960404 |
T |
|
| Q |
931 |
aatgagaaaattttcttattatatgctgatggaag |
965 |
Q |
| |
|
||| ||| |||| |||| |||| || ||||||||| |
|
|
| T |
30960403 |
aataagagaattatcttgttatgtgttgatggaag |
30960369 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 388; E-Value: 0
Query Start/End: Original strand, 146 - 925
Target Start/End: Complemental strand, 31224693 - 31223914
Alignment:
| Q |
146 |
atcattccataactataaacatcagacttgtgtgaaactcctccaaattgtctattccatacttctggagctacatatccgactgttcctcttgcatttg |
245 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| || | |||||||||| || || |
|
|
| T |
31224693 |
atcattccataactataaacatcagacttgtgtgaaactcctccaaaatgtctattccacacttctggagctacataccccattgttcctctttgatctg |
31224594 |
T |
|
| Q |
246 |
acatgaatatagtgctctctttctcgagacagagctttgcaagtccaaaatctgaaatctttggacataaattttcatctaaaagaatgttatgtggttt |
345 |
Q |
| |
|
|||| | | | |||| |||||| |||||| || |||||||||||||||||||||||||| ||||||||||| ||||||||||| ||||| |||||||| |
|
|
| T |
31224593 |
acattgaaacaatgctttctttcctgagacatagttttgcaagtccaaaatctgaaatcttcggacataaattatcatctaaaaggatgttgtgtggttt |
31224494 |
T |
|
| Q |
346 |
tatatcaaaatgtaaaatccgggtattacatcccctatgcaaatactccaaacctcgagctatccctttggcaatttgatacaaattatcccaactcaaa |
445 |
Q |
| |
|
||| |||||||||||||| | || ||||||| | |||||| ||||| | || |||||||||||||| ||||||| |||||| ||||||||||||||| |
|
|
| T |
31224493 |
tatgtcaaaatgtaaaattctagtggtacatcctccatgcaagtactctagtccacgagctatcccttttgcaattttatacaatttatcccaactcaaa |
31224394 |
T |
|
| Q |
446 |
gatgcaatggtttcaggtccctcattgtaaataaatttgtcaagggaaccattagacataaattcatatatgagagctttgttgcaaccttcaaaacaaa |
545 |
Q |
| |
|
|||||||| |||||| || ||| |||||| |||||||||||||| |||||||| |||||||||||||||| ||||||||| ||| ||||||||||||| |
|
|
| T |
31224393 |
gatgcaattgtttcaagttccttattgtagataaatttgtcaagagaaccatttgacataaattcatatacgagagcttttttgttgccttcaaaacaaa |
31224294 |
T |
|
| Q |
546 |
atccaagaagggtaacaacattaacatgtgaggttctagtaatactagcaacctcattaataaattcttcaccatttccttttgatgcatttagcatctt |
645 |
Q |
| |
|
||||||||||||| |||||||||||||| |||||||||| ||||||||||||||||||||||||||| |||||||||||||||||| |||| | ||||| |
|
|
| T |
31224293 |
atccaagaagggtgacaacattaacatgagaggttctagaaatactagcaacctcattaataaattcctcaccatttccttttgatacattcaatatctt |
31224194 |
T |
|
| Q |
646 |
cactgccacaagggaaccattcactagctctcctttgtacacagcaccaaaacccccttgaccaagtttaattttgaatgagtttgtcattttctttatt |
745 |
Q |
| |
|
|||||||||||| ||||||| | || || ||||||||||||| |||||||||||||||| || || ||| || || ||||||||||| ||||||||| |
|
|
| T |
31224193 |
cactgccacaagacaaccattaaataactttcctttgtacacaacaccaaaacccccttgcccgagcttatcctttaacgagtttgtcatgttctttatt |
31224094 |
T |
|
| Q |
746 |
tctgaaaatttatatcttttttgtaatagtgctctatgatcttttaaaaattcttcaacgtttatatcattctttgtcttaaaccaaaattctacatgta |
845 |
Q |
| |
|
|||||| ||||||||||||| || ||||| |||| |||||||||||||||| |||||| |||| |||||||||||||| |||||||| || ||| ||| |
|
|
| T |
31224093 |
tctgaatatttatatcttttctgcaatagagctccatgatcttttaaaaatgcttcaatgtttttatcattctttgtcctaaaccaagatgttacttgtt |
31223994 |
T |
|
| Q |
846 |
gtaccgatgacttgcttctataacaacagattatgatgcacatcagcaatgctattattgctgcacttccaacacctgtt |
925 |
Q |
| |
|
||| ||||||||| |||| || |||| ||| ||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
31223993 |
gtattaatgacttgcctctaaaataacaaattgtgatgcacatcagcaatgctaccattgctgcacttccaacacctgtt |
31223914 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 368; E-Value: 0
Query Start/End: Original strand, 373 - 965
Target Start/End: Complemental strand, 30986279 - 30985692
Alignment:
| Q |
373 |
acatcccctatgcaaatactccaaacctcgagctatccctttggcaatttgatacaaattatcccaactcaaagatgcaatggtttcaggtccctcattg |
472 |
Q |
| |
|
|||||| ||||||||||| || | || || ||||||||||| |||||||||| || |||||||||||| ||||||||||| ||||||||| ||| |||| |
|
|
| T |
30986279 |
acatcctctatgcaaatattctagcccacgggctatccctttcgcaatttgatgcatattatcccaacttaaagatgcaatcgtttcaggttccttattg |
30986180 |
T |
|
| Q |
473 |
taaataaatttgtcaagggaaccattagacataaattcatatatgagagctttgttgcaaccttcaaaacaaaatccaagaagggtaacaacattaacat |
572 |
Q |
| |
|
|| |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
30986179 |
tatataaatttgtcaagggaaccattagacataaattcatatatgagagctttattacaaccttcaaaacaaaatccaagaaggttaacaacattaacat |
30986080 |
T |
|
| Q |
573 |
gtgaggttctagtaatactagcaacctcattaataaattcttcaccatttccttttgatgcatttagcatcttcactgccacaagggaaccattcactag |
672 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||| ||||| |||||||| | || |
|
|
| T |
30986079 |
gtgaggttctagtaatactagcaacctcattaataaagtcttcaccatttccttttgatgcatttaatatcttcactgctacaagagaaccattgaataa |
30985980 |
T |
|
| Q |
673 |
ctctcctttgtacacagcaccaaaacccccttgaccaagtttaattttgaatgagtttgtcattttctttatttctgaaaatttatatcttttttgtaat |
772 |
Q |
| |
|
|| |||||||||||| |||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| |||||||||||||| ||| |
|
|
| T |
30985979 |
ctttcctttgtacaccgcaccaaaacccccttgaccaactttaattttgaatgagtttgtaattttctttatttctgaaaacttatatcttttttgcaat |
30985880 |
T |
|
| Q |
773 |
agtgctctatgatcttttaaaaattcttcaacgtttatatcattctttgtcttaaaccaaaattctacatgtagtaccgatgacttgcttctataacaac |
872 |
Q |
| |
|
|| ||| ||| |||||||||||| |||||| |||||||||||||||||||||||||||||||| ||| ||||| ||||||||||| ||||||||||| |
|
|
| T |
30985879 |
agaactccatggtcttttaaaaatgcttcaatgtttatatcattctttgtcttaaaccaaaattttac---tagtatcgatgacttgcctctataacaac |
30985783 |
T |
|
| Q |
873 |
agattatgatgcacatcagcaatgctattattgctgcacttccaacacctgtttttataatgagaaaattttcttattatatgctgatggaag |
965 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||||||||||| | ||| ||| || |||| |||||||| |||||||||||| |
|
|
| T |
30985782 |
agattatgatgcacatcagcaatgctaccattgctgcacttccaacacctgctgttagaataag--aattatcttattaagtgctgatggaag |
30985692 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 363; E-Value: 0
Query Start/End: Original strand, 145 - 819
Target Start/End: Original strand, 31145397 - 31146071
Alignment:
| Q |
145 |
catcattccataactataaacatcagacttgtgtgaaactcctccaaattgtctattccatacttctggagctacatatccgactgttcctcttgcattt |
244 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| |||||||||||||||||||| | ||| |||||| || | |
|
|
| T |
31145397 |
catcattccataactataaacatcagatttgtgtgaaactcctccaaaatgtctattccacacttctggagctacatatcccattgtccctctttgatct |
31145496 |
T |
|
| Q |
245 |
gacatgaatatagtgctctctttctcgagacagagctttgcaagtccaaaatctgaaatctttggacataaattttcatctaaaagaatgttatgtggtt |
344 |
Q |
| |
|
||||| | ||| ||||||||| | ||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
31145497 |
gacattgaaataatgctctcttgttttggacagagttttgcaagtccaaaatctgaaatctttggacataagttttcatctaaaagaatgttatgtggtt |
31145596 |
T |
|
| Q |
345 |
ttatatcaaaatgtaaaatccgggtattacatcccctatgcaaatactccaaacctcgagctatccctttggcaatttgatacaaattatcccaactcaa |
444 |
Q |
| |
|
|||| |||||||||||||| || || ||||||| |||||||| ||||| | || |||||||||||||| ||||||||||||||||| ||||||||||| |
|
|
| T |
31145597 |
ttatgtcaaaatgtaaaattcgagtggtacatcctctatgcaagtactctagcccacgagctatcccttttgcaatttgatacaaattctcccaactcaa |
31145696 |
T |
|
| Q |
445 |
agatgcaatggtttcaggtccctcattgtaaataaatttgtcaagggaaccattagacataaattcatatatgagagctttgttgcaaccttcaaaacaa |
544 |
Q |
| |
|
||||||||| ||||||||||||| ||||||||||||||||||||| |||||||| |||||||||||||||||||| ||||| || |||||||||||| |
|
|
| T |
31145697 |
agatgcaattgtttcaggtcccttattgtaaataaatttgtcaagtgaaccattggacataaattcatatatgagtgctttttttgtgccttcaaaacaa |
31145796 |
T |
|
| Q |
545 |
aatccaagaagggtaacaacattaacatgtgaggttctagtaatactagcaacctcattaataaattcttcaccatttccttttgatgcatttagcatct |
644 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||||||||| | |||||||||||||||||||||||| |||||||| |||| ||| | |||| |
|
|
| T |
31145797 |
aatccaagaagggtaacaacgttaacatgtgaggttctagtaatactggaaacctcattaataaattcttcaccgtttcctttggatgaattcaatatct |
31145896 |
T |
|
| Q |
645 |
tcactgccacaagggaaccattcactagctctcctttgtacacagcaccaaaacccccttgaccaagtttaattttgaatgagtttgtcattttctttat |
744 |
Q |
| |
|
| | || ||| | ||||||| | || || ||||||||||||| |||||||||| |||||||||||||||| ||||| |||| ||||||||||||||| |
|
|
| T |
31145897 |
ttatagcgacatgacaaccattgaataactttcctttgtacacaacaccaaaaccaccttgaccaagtttaaccttgaaagagtctgtcattttctttat |
31145996 |
T |
|
| Q |
745 |
ttctgaaaatttatatcttttttgtaatagtgctctatgatcttttaaaaattcttcaacgtttatatcattctt |
819 |
Q |
| |
|
||||||| ||||||||||||| || ||||| |||| |||||||||||||||| |||||| ||| |||||||||| |
|
|
| T |
31145997 |
ttctgaatatttatatcttttctgcaatagagctccatgatcttttaaaaatgcttcaatatttgtatcattctt |
31146071 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 344; E-Value: 0
Query Start/End: Original strand, 145 - 888
Target Start/End: Original strand, 31171710 - 31172453
Alignment:
| Q |
145 |
catcattccataactataaacatcagacttgtgtgaaactcctccaaattgtctattccatacttctggagctacatatccgactgttcctcttgcattt |
244 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| |||||||||||||||||||| | ||| |||||| || | |
|
|
| T |
31171710 |
catcattccataactataaacatcagatttgtgtgaaactcctccaaaatgtctattccacacttctggagctacatatcccattgtccctctttgatct |
31171809 |
T |
|
| Q |
245 |
gacatgaatatagtgctctctttctcgagacagagctttgcaagtccaaaatctgaaatctttggacataaattttcatctaaaagaatgttatgtggtt |
344 |
Q |
| |
|
||||| | ||| ||||||||| | ||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
31171810 |
gacattgaaataatgctctcttgttttggacagagttttgcaagtccaaaatctgaaatctttggacataagttttcatctaaaagaatgttatgtggtt |
31171909 |
T |
|
| Q |
345 |
ttatatcaaaatgtaaaatccgggtattacatcccctatgcaaatactccaaacctcgagctatccctttggcaatttgatacaaattatcccaactcaa |
444 |
Q |
| |
|
|||| |||||||||||||| || || ||||||| |||||||| ||||| | || |||||||||||||| ||||||||||||||||| ||||||||||| |
|
|
| T |
31171910 |
ttatgtcaaaatgtaaaattcgagtggtacatcctctatgcaagtactctagcccacgagctatcccttttgcaatttgatacaaattctcccaactcaa |
31172009 |
T |
|
| Q |
445 |
agatgcaatggtttcaggtccctcattgtaaataaatttgtcaagggaaccattagacataaattcatatatgagagctttgttgcaaccttcaaaacaa |
544 |
Q |
| |
|
||||||||| ||||||||||||| ||||||||||||||||||||| |||||||| ||||||||||| |||||||| ||||| || |||||||||||| |
|
|
| T |
31172010 |
agatgcaattgtttcaggtcccttattgtaaataaatttgtcaagagaaccatttgacataaattcgtatatgagtgctttttttgtgccttcaaaacaa |
31172109 |
T |
|
| Q |
545 |
aatccaagaagggtaacaacattaacatgtgaggttctagtaatactagcaacctcattaataaattcttcaccatttccttttgatgcatttagcatct |
644 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||||| |||||||| |||||||||||||||||||||||| |||||||| |||| ||| | |||| |
|
|
| T |
31172110 |
aatccaagaagggtaacaacgttaacatgtgaggttctagaaatactagaaacctcattaataaattcttcaccgtttcctttggatggattcaatatct |
31172209 |
T |
|
| Q |
645 |
tcactgccacaagggaaccattcactagctctcctttgtacacagcaccaaaacccccttgaccaagtttaattttgaatgagtttgtcattttctttat |
744 |
Q |
| |
|
| | || || | ||||||| | || || ||||||||||||| ||||||| || |||||||||||||||| ||||| |||||||||||||||||||| |
|
|
| T |
31172210 |
ttatagcaacgtgacaaccattgaataactttcctttgtacacaacaccaaagcctccttgaccaagtttaaccttgaaagagtttgtcattttctttat |
31172309 |
T |
|
| Q |
745 |
ttctgaaaatttatatcttttttgtaatagtgctctatgatcttttaaaaattcttcaacgtttatatcattctttgtcttaaaccaaaattctacatgt |
844 |
Q |
| |
|
||| ||||||||||||||||| || |||| |||| ||| |||||||||||| |||||| || |||||||||| || |||||| ||| | | ||| |
|
|
| T |
31172310 |
ttcagaaaatttatatcttttctgcaataaagctccatggtcttttaaaaatgcttcaatattgttatcattcttggttctaaaccgaaaccttccctgt |
31172409 |
T |
|
| Q |
845 |
agtaccgatgacttgcttctataacaacagattatgatgcacat |
888 |
Q |
| |
|
||| ||||||||||||||| |||| | || ||||||||||| |
|
|
| T |
31172410 |
cgtattgatgacttgcttctaagacaataaataatgatgcacat |
31172453 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 337; E-Value: 0
Query Start/End: Original strand, 145 - 801
Target Start/End: Original strand, 31201262 - 31201918
Alignment:
| Q |
145 |
catcattccataactataaacatcagacttgtgtgaaactcctccaaattgtctattccatacttctggagctacatatccgactgttcctcttgcattt |
244 |
Q |
| |
|
|||||||||||||||||||||||| ||||||| ||||||||||||||| ||||||||||| | |||||||||||||||||| | || |||||| || | |
|
|
| T |
31201262 |
catcattccataactataaacatcggacttgtatgaaactcctccaaaatgtctattccacatttctggagctacatatcccatagtccctctttgatct |
31201361 |
T |
|
| Q |
245 |
gacatgaatatagtgctctctttctcgagacagagctttgcaagtccaaaatctgaaatctttggacataaattttcatctaaaagaatgttatgtggtt |
344 |
Q |
| |
|
||||| | ||| ||||||| ||| |||| || |||||||||||||||||||||||||||||||| ||||| |||||||||||||| |||||||||| |
|
|
| T |
31201362 |
gacatcgaaataatgctctcgttccttggacaaagttttgcaagtccaaaatctgaaatctttggacaaaaattctcatctaaaagaatattatgtggtt |
31201461 |
T |
|
| Q |
345 |
ttatatcaaaatgtaaaatccgggtattacatcccctatgcaaatactccaaacctcgagctatccctttggcaatttgatacaaattatcccaactcaa |
444 |
Q |
| |
|
|||| || ||||||||||| || || ||||||| |||||||| ||||| | || |||||||| ||||| ||||||||||||||||||||||||||||| |
|
|
| T |
31201462 |
ttatgtcgaaatgtaaaattcgagtggtacatcctctatgcaagtactctagtccacgagctattccttttgcaatttgatacaaattatcccaactcaa |
31201561 |
T |
|
| Q |
445 |
agatgcaatggtttcaggtccctcattgtaaataaatttgtcaagggaaccattagacataaattcatatatgagagctttgttgcaaccttcaaaacaa |
544 |
Q |
| |
|
||||||||||||||| ||||||| ||||||||||| ||||||||| |||||||| |||||||||||||||||||| ||||| || |||||||||||| |
|
|
| T |
31201562 |
agatgcaatggtttctggtcccttattgtaaataagtttgtcaagagaaccattggacataaattcatatatgagtgctttttttgtgccttcaaaacaa |
31201661 |
T |
|
| Q |
545 |
aatccaagaagggtaacaacattaacatgtgaggttctagtaatactagcaacctcattaataaattcttcaccatttccttttgatgcatttagcatct |
644 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| | |||| |
|
|
| T |
31201662 |
aatccaagaagggtgacaacattaacatgtgaggttctagtaatactagcaacctcattaataaattcttcaccatttcctttggatgaattcaatatct |
31201761 |
T |
|
| Q |
645 |
tcactgccacaagggaaccattcactagctctcctttgtacacagcaccaaaacccccttgaccaagtttaattttgaatgagtttgtcattttctttat |
744 |
Q |
| |
|
| | || | || ||||||| | || || ||||||||||||| ||||||||||||||||||||||||||| ||||| |||||||||||||||||||| |
|
|
| T |
31201762 |
ttatcgcagcgtggcaaccattgaataactttcctttgtacacaacaccaaaacccccttgaccaagtttaaccttgaaagagtttgtcattttctttat |
31201861 |
T |
|
| Q |
745 |
ttctgaaaatttatatcttttttgtaatagtgctctatgatcttttaaaaattcttc |
801 |
Q |
| |
|
||||||| ||||||||||||| || || || |||| |||||||||||||||| |||| |
|
|
| T |
31201862 |
ttctgaatatttatatcttttctgcaacagagctccatgatcttttaaaaatgcttc |
31201918 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 319; E-Value: 1e-179
Query Start/End: Original strand, 145 - 819
Target Start/End: Original strand, 31189455 - 31190129
Alignment:
| Q |
145 |
catcattccataactataaacatcagacttgtgtgaaactcctccaaattgtctattccatacttctggagctacatatccgactgttcctcttgcattt |
244 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| |||||||||||||||||||| | ||| |||||| || | |
|
|
| T |
31189455 |
catcattccataactataaacatcagatttgtgtgaaactcctccaaaatgtctattccacacttctggagctacatatcccattgtccctctttgatct |
31189554 |
T |
|
| Q |
245 |
gacatgaatatagtgctctctttctcgagacagagctttgcaagtccaaaatctgaaatctttggacataaattttcatctaaaagaatgttatgtggtt |
344 |
Q |
| |
|
| ||| | ||| |||||||||| | ||||||| ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
31189555 |
gtcatcgaaataatgctctctttttttggacagagttttgcaagtccaaaatctgaaatttttggacataaattctcatctaaaagaatgttatgtggtt |
31189654 |
T |
|
| Q |
345 |
ttatatcaaaatgtaaaatccgggtattacatcccctatgcaaatactccaaacctcgagctatccctttggcaatttgatacaaattatcccaactcaa |
444 |
Q |
| |
|
|||| || ||||||||||| | || ||||||| |||||||| ||||| | || || ||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
31189655 |
ttatgtcgaaatgtaaaattcttgtggtacatcctctatgcaagtactctagtccacgggctatcccttttgcaatttgatacaaattatcccaactcaa |
31189754 |
T |
|
| Q |
445 |
agatgcaatggtttcaggtccctcattgtaaataaatttgtcaagggaaccattagacataaattcatatatgagagctttgttgcaaccttcaaaacaa |
544 |
Q |
| |
|
||||| ||| | || ||||||| ||||| |||||||||||||| |||||||| ||||||||||||||||| || ||||| || |||||||||||| |
|
|
| T |
31189755 |
agatgtaattctctctggtcccttgttgtagataaatttgtcaagagaaccatttgacataaattcatatataagtgctttttttttgccttcaaaacaa |
31189854 |
T |
|
| Q |
545 |
aatccaagaagggtaacaacattaacatgtgaggttctagtaatactagcaacctcattaataaattcttcaccatttccttttgatgcatttagcatct |
644 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| |||||||| |||| ||| | |||| |
|
|
| T |
31189855 |
aatccaagaagggtgacaacattaacatgtgaggttctagtaatactagaaacttcattaataaattcttcaccgtttcctttggatgaattcaatatct |
31189954 |
T |
|
| Q |
645 |
tcactgccacaagggaaccattcactagctctcctttgtacacagcaccaaaacccccttgaccaagtttaattttgaatgagtttgtcattttctttat |
744 |
Q |
| |
|
| | || ||| ||||||| | || || ||||||||||||| ||||||||||||||||||||||||||| ||||| |||| |||||||||||||| |
|
|
| T |
31189955 |
ttatagcaacatcacaaccattgagtaactttcctttgtacacaacaccaaaacccccttgaccaagtttaaccttgaaagagtctgtcattttctttag |
31190054 |
T |
|
| Q |
745 |
ttctgaaaatttatatcttttttgtaatagtgctctatgatcttttaaaaattcttcaacgtttatatcattctt |
819 |
Q |
| |
|
||||||| ||||||||||||| || ||||| |||| |||||||||||||||| |||||| ||| |||||||||| |
|
|
| T |
31190055 |
ttctgaatatttatatcttttctgcaatagagctccatgatcttttaaaaatgcttcaatatttgtatcattctt |
31190129 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 145 - 658
Target Start/End: Complemental strand, 31214425 - 31213912
Alignment:
| Q |
145 |
catcattccataactataaacatcagacttgtgtgaaactcctccaaattgtctattccatacttctggagctacatatccgactgttcctcttgcattt |
244 |
Q |
| |
|
||||||||| |||||||||||||||||||||| ||||| |||||||| | ||||||||| | || |||||||||||||| | |||||||| ||| | |
|
|
| T |
31214425 |
catcattccgtaactataaacatcagacttgtacgaaacgcctccaaagtttctattccacaactcaggagctacatatcccatcgttcctctagcacct |
31214326 |
T |
|
| Q |
245 |
gacatgaatatagtgctctctttctcgagacagagctttgcaagtccaaaatctgaaatctttggacataaattttcatctaaaagaatgttatgtggtt |
344 |
Q |
| |
|
||||| | ||| |||| ||||||| |||||| || ||||||||||||||||||| ||||||||||| |||||||||||||| | ||| |||||||||| |
|
|
| T |
31214325 |
gacatcgaaataatgctttctttcttgagacaaagtcttgcaagtccaaaatctgatatctttggacaaaaattttcatctaataaaatattatgtggtt |
31214226 |
T |
|
| Q |
345 |
ttatatcaaaatgtaaaatccgggtattacatcccctatgcaaatactccaaacctcgagctatccctttggcaatttgatacaaattatcccaactcaa |
444 |
Q |
| |
|
||||||||||||||||||| || ||| | ||||| ||||||| |||||||| ||||||||||||||||| ||||||| ||| | | | |||||||||| |
|
|
| T |
31214225 |
ttatatcaaaatgtaaaattcgagtactgcatcctctatgcaggtactccaaccctcgagctatccctttagcaatttcataaagaatctcccaactcag |
31214126 |
T |
|
| Q |
445 |
agatgcaatggtttcaggtccctcattgtaaataaatttgtcaagggaaccattagacataaattcatatatgagagctttgttgcaaccttcaaaacaa |
544 |
Q |
| |
|
|||| | ||||||| || | | |||||||||||||||||||| |||||||||||||| |||||||| || || ||||| |||| ||| ||||||||| |
|
|
| T |
31214125 |
agattgataggtttcatgttgcgcgttgtaaataaatttgtcaagcgaaccattagacatgaattcatagatcagggcttttttgcgaccgtcaaaacaa |
31214026 |
T |
|
| Q |
545 |
aatccaagaagggtaacaacattaacatgtgaggttctagtaatactagcaacctcattaataaattcttcaccatttccttttgatgcatttagcatct |
644 |
Q |
| |
|
||||||||||||| |||||||||||| || |||||| | || || |||| |||||| || |||||||||||||| |||||||| ||||| |||| |||| |
|
|
| T |
31214025 |
aatccaagaagggcaacaacattaacgtgagaggtttttgttatgctagaaacctcgttcataaattcttcaccttttcctttggatgcgtttaatatct |
31213926 |
T |
|
| Q |
645 |
tcactgccacaagg |
658 |
Q |
| |
|
|||| ||||||||| |
|
|
| T |
31213925 |
tcacggccacaagg |
31213912 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 167; E-Value: 7e-89
Query Start/End: Original strand, 145 - 627
Target Start/End: Complemental strand, 31229974 - 31229493
Alignment:
| Q |
145 |
catcattccataactataaacatcagacttgtgtgaaactcctccaaattgtctattccatacttctggagctacatatccgactgttcctcttgcattt |
244 |
Q |
| |
|
||||||||||||||||||||| ||||||||||| ||||||| |||||| | | ||||||||| || ||||||||||| || | ||| ||||| || | | |
|
|
| T |
31229974 |
catcattccataactataaacgtcagacttgtgcgaaactcatccaaaatttatattccataactcaggagctacataccccattgtccctctagcgtct |
31229875 |
T |
|
| Q |
245 |
gacatgaatatagtgctctctttctcgagacagagctttgcaagtccaaaatctgaaatctttggacataaattttcatctaaaagaatgttatgtggtt |
344 |
Q |
| |
|
||||| | ||| |||||||||||| | || || ||| ||||||||||||||| ||||||||||| ||||| |||| ||| || ||||||||||||| |
|
|
| T |
31229874 |
gacatagaaataatgctctctttcttatggcaaagtcttgaaagtccaaaatctgatatctttggacaaaaattctcatataagaggatgttatgtggtt |
31229775 |
T |
|
| Q |
345 |
ttatatcaaaatgtaaaatccgggtattacatcccctatgcaaatactccaaacctcgagctatccctttggcaatttgatacaaattatcccaactcaa |
444 |
Q |
| |
|
| || ||||||||||| || | || |||||||| ||||||| ||||| | ||||||||||||||||| ||||||||||| | | | |||||||||| |
|
|
| T |
31229774 |
tgatgtcaaaatgtaagattcaagtgctacatcccttatgcaagtactcaagccctcgagctatccctttcgcaatttgataaagaatgtcccaactcag |
31229675 |
T |
|
| Q |
445 |
agatgcaatggtttcaggtccctcattgtaaataaatttgtcaagggaaccattagacataaattcatatatgagagctttgttgcaaccttcaaaacaa |
544 |
Q |
| |
|
||||| |||| | |||||||||| ||||| || ||||| |||||||||||||| ||||| |||||||| ||||||||||| || | |||||||||||| |
|
|
| T |
31229674 |
agatggaatg-tctcaggtccctttttgtagatgaatttttcaagggaaccattcgacattaattcataaatgagagcttttttccgtccttcaaaacaa |
31229576 |
T |
|
| Q |
545 |
aatccaagaagggtaacaacattaacatgtgaggttctagtaatactagcaacctcattaataaattcttcaccatttccttt |
627 |
Q |
| |
|
||||||||||||| | ||||||||| || |||||| ||||||| |||| ||||||||| |||||||| |||||||||||||| |
|
|
| T |
31229575 |
aatccaagaagggcgaaaacattaacgtgagaggttttagtaatgctagaaacctcattcataaattcatcaccatttccttt |
31229493 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 107; E-Value: 4e-53
Query Start/End: Original strand, 404 - 618
Target Start/End: Original strand, 31131447 - 31131656
Alignment:
| Q |
404 |
gctatccctttggcaatttgatacaaattatcccaactcaaagatgcaatggtttcaggtccctcattgtaaataaatttgtcaagggaaccattagaca |
503 |
Q |
| |
|
||||||||||| |||||||||| ||||||||| || | |||| |||| ||||||||||| |||||| |||||||||||||| ||||||||||||| |
|
|
| T |
31131447 |
gctatccctttcgcaatttgatgcaaattatctcagc-----gatgtgatggattcaggtcccttattgtagataaatttgtcaagagaaccattagaca |
31131541 |
T |
|
| Q |
504 |
taaattcatatatgagagctttgttgcaaccttcaaaacaaaatccaagaagggtaacaacattaacatgtgaggttctagtaatactagcaacctcatt |
603 |
Q |
| |
|
|||||||||||| |||||||| ||| ||||| ||||||||||||||||||| |||| ||||||||| |||||||||| |||||||||||||||||| |
|
|
| T |
31131542 |
taaattcatatacaagagcttttttggtgccttcgtaacaaaatccaagaagggtgacaatattaacatgcgaggttctagaaatactagcaacctcatt |
31131641 |
T |
|
| Q |
604 |
aataaattcttcacc |
618 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
31131642 |
aataaattcttcacc |
31131656 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 676 - 803
Target Start/End: Original strand, 31131679 - 31131805
Alignment:
| Q |
676 |
tcctttgtacacagcaccaaaacccccttgaccaagtttaattttgaatgagtttgtcattttctttatttctgaaaatttatatcttttttgtaatagt |
775 |
Q |
| |
|
||||||| |||||||||||||||| |||||||||||||||| ||||||||||||| |||| |||||||||| | |||||||||||||| || ||||| |
|
|
| T |
31131679 |
tcctttgcacacagcaccaaaacctccttgaccaagtttaaccttgaatgagtttg-cattctctttatttcaaagaatttatatcttttctgcaataga |
31131777 |
T |
|
| Q |
776 |
gctctatgatcttttaaaaattcttcaa |
803 |
Q |
| |
|
||||||||||||||||||||| |||||| |
|
|
| T |
31131778 |
gctctatgatcttttaaaaatgcttcaa |
31131805 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 988 - 1020
Target Start/End: Complemental strand, 30944341 - 30944309
Alignment:
| Q |
988 |
ttacagtgaggtctttccttatcatgttatttg |
1020 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |
|
|
| T |
30944341 |
ttacagtgaggtctttccttatcatgttatttg |
30944309 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 43; Significance: 0.000000000000007; HSPs: 6)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 287 - 365
Target Start/End: Original strand, 31618457 - 31618535
Alignment:
| Q |
287 |
agtccaaaatctgaaatctttggacataaattttcatctaaaagaatgttatgtggttttatatcaaaatgtaaaatcc |
365 |
Q |
| |
|
|||||||||||||| || |||||||| |||| |||||| ||||||||||| || ||||||||||||| ||||| ||||| |
|
|
| T |
31618457 |
agtccaaaatctgagatttttggacaaaaatcttcatccaaaagaatgttttgaggttttatatcaagatgtagaatcc |
31618535 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 281 - 401
Target Start/End: Original strand, 31585591 - 31585711
Alignment:
| Q |
281 |
tttgcaagtccaaaatctgaaatctttggacataaattttcatctaaaagaatgttatgtggttttatatcaaaatgtaaaatccgggtattacatcccc |
380 |
Q |
| |
|
||||| ||||||||||| || || |||||||| |||| |||||| ||||||||||| || ||||| ||||||| ||| | ||||| | | ||||||| |
|
|
| T |
31585591 |
tttgctagtccaaaatcagatatttttggacaaaaatcttcatccaaaagaatgttttggggtttgatatcaagatgcagaatcctcgaactacatcctt |
31585690 |
T |
|
| Q |
381 |
tatgcaaatactccaaacctc |
401 |
Q |
| |
|
|||||||||||| ||||||| |
|
|
| T |
31585691 |
gatgcaaatactctaaacctc |
31585711 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 290 - 363
Target Start/End: Complemental strand, 31439055 - 31438982
Alignment:
| Q |
290 |
ccaaaatctgaaatctttggacataaattttcatctaaaagaatgttatgtggttttatatcaaaatgtaaaat |
363 |
Q |
| |
|
|||||||| || || |||||||| |||| |||||||||||||||||| || ||||| ||||||| ||| ||||| |
|
|
| T |
31439055 |
ccaaaatcagatatttttggacaaaaatcttcatctaaaagaatgttttgaggtttgatatcaagatgcaaaat |
31438982 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 287 - 363
Target Start/End: Original strand, 31541209 - 31541285
Alignment:
| Q |
287 |
agtccaaaatctgaaatctttggacataaattttcatctaaaagaatgttatgtggttttatatcaaaatgtaaaat |
363 |
Q |
| |
|
||||||||||| || || || || || ||||||||||| ||||||||||| |||||||| ||||||| ||| ||||| |
|
|
| T |
31541209 |
agtccaaaatcagagattttggggcaaaaattttcatccaaaagaatgttttgtggtttgatatcaagatgcaaaat |
31541285 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 284 - 359
Target Start/End: Original strand, 31608444 - 31608519
Alignment:
| Q |
284 |
gcaagtccaaaatctgaaatctttggacataaattttcatctaaaagaatgttatgtggttttatatcaaaatgta |
359 |
Q |
| |
|
|||||||||||||| || || |||||||| || | |||||| ||||||||||| || ||||| ||||||| ||||| |
|
|
| T |
31608444 |
gcaagtccaaaatcagatatttttggacaaaagtcttcatccaaaagaatgttttgaggtttgatatcaagatgta |
31608519 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 287 - 365
Target Start/End: Complemental strand, 31572881 - 31572804
Alignment:
| Q |
287 |
agtccaaaatctgaaatctttggacataaattttcatctaaaagaatgttatgtggttttatatcaaaatgtaaaatcc |
365 |
Q |
| |
|
||||||||||| || || ||||| || |||| |||||| ||||||||||| || ||||||||||||| ||| ||||||| |
|
|
| T |
31572881 |
agtccaaaatcagagatttttgggcaaaaatcttcatccaaaagaatgttttg-ggttttatatcaagatgcaaaatcc |
31572804 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 37; Significance: 0.00000000002; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 284 - 444
Target Start/End: Complemental strand, 44035721 - 44035561
Alignment:
| Q |
284 |
gcaagtccaaaatctgaaatctttggacataaattttcatctaaaagaatgttatgtggttttatatcaaaatgtaaaatccgggtattacatcccctat |
383 |
Q |
| |
|
|||||||||||||| || ||||| |||| || |||| || |||||||||||||||||||| || || ||||| ||||||| || || || || ||| |
|
|
| T |
44035721 |
gcaagtccaaaatcagatatcttgggacggtaagtttcgtccaaaagaatgttatgtggtttaatgtcgaaatgaaaaatcctagtgttgcaccctttat |
44035622 |
T |
|
| Q |
384 |
gcaaatactccaaacctcgagctatccctttggcaatttgatacaaattatcccaactcaa |
444 |
Q |
| |
|
|||| ||||| | ||||||||||||||| | ||||| || | ||||| ||||||||||| |
|
|
| T |
44035621 |
gcaagtactctagtcctcgagctatccctattgcaatctggtgtaaattctcccaactcaa |
44035561 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 485 - 573
Target Start/End: Complemental strand, 44035496 - 44035408
Alignment:
| Q |
485 |
tcaagggaaccattagacataaattcatatatgagagctttgttgcaaccttcaaaacaaaatccaagaagggtaacaacattaacatg |
573 |
Q |
| |
|
||||| |||||||| |||||||| ||||| ||||||||||| ||| || |||| ||||||||| | ||| || |||||||||||||| |
|
|
| T |
44035496 |
tcaagtgaaccattggacataaactcatagatgagagcttttttggttccatcaagacaaaatcctaaaagagtgacaacattaacatg |
44035408 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 34; Significance: 0.000000002; HSPs: 7)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 278 - 359
Target Start/End: Complemental strand, 9234011 - 9233930
Alignment:
| Q |
278 |
agctttgcaagtccaaaatctgaaatctttggacataaattttcatctaaaagaatgttatgtggttttatatcaaaatgta |
359 |
Q |
| |
|
|||||||||||||||||||| |||| ||||||| |||| ||| |||| |||||| ||||| || || ||||||||||||| |
|
|
| T |
9234011 |
agctttgcaagtccaaaatccgaaacctttggaacgaaatcttcgtctagaagaatattatgaggcttgatatcaaaatgta |
9233930 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 558 - 631
Target Start/End: Complemental strand, 49215225 - 49215152
Alignment:
| Q |
558 |
taacaacattaacatgtgaggttctagtaatactagcaacctcattaataaattcttcaccatttccttttgat |
631 |
Q |
| |
|
||||||| || |||||||| |||||| ||||||| ||||| ||||||||||| ||||| |||| ||||||||| |
|
|
| T |
49215225 |
taacaacgttgacatgtgaagttctactaatactcgcaacttcattaataaaatcttcgccatcgccttttgat |
49215152 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 198
Target Start/End: Complemental strand, 49215626 - 49215559
Alignment:
| Q |
131 |
accatctctaaaagcatcattccataactataaacatcagacttgtgtgaaactcctccaaattgtct |
198 |
Q |
| |
|
||||| ||||||| |||||||||||||||||||||||| || || ||||| || || ||||| ||||| |
|
|
| T |
49215626 |
accatttctaaaaccatcattccataactataaacatctgatttatgtgacaccccaccaaaatgtct |
49215559 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 281 - 363
Target Start/End: Complemental strand, 49725230 - 49725148
Alignment:
| Q |
281 |
tttgcaagtccaaaatctgaaatctttggacataaattttcatctaaaagaatgttatgtggttttatatcaaaatgtaaaat |
363 |
Q |
| |
|
||||||||||||||||| ||||| | || ||||| ||||| |||||||||||||| |||||||| |||||||| ||||| |
|
|
| T |
49725230 |
tttgcaagtccaaaatccgaaattctggggttgaaattctcatccaaaagaatgttatgaggttttatgtcaaaatgcaaaat |
49725148 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 281 - 363
Target Start/End: Complemental strand, 49728652 - 49728570
Alignment:
| Q |
281 |
tttgcaagtccaaaatctgaaatctttggacataaattttcatctaaaagaatgttatgtggttttatatcaaaatgtaaaat |
363 |
Q |
| |
|
||||||||||||||||| |||| ||| ||||| |||| || |||| | || ||||| ||||||||||||||||||||||| |
|
|
| T |
49728652 |
tttgcaagtccaaaatccgaaaccttaggacaaaaatcatcgtctagcaatatattatgaggttttatatcaaaatgtaaaat |
49728570 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 278 - 359
Target Start/End: Original strand, 9384383 - 9384464
Alignment:
| Q |
278 |
agctttgcaagtccaaaatctgaaatctttggacataaattttcatctaaaagaatgttatgtggttttatatcaaaatgta |
359 |
Q |
| |
|
|||||||||||||||||||| |||| ||||||| || | ||| |||| |||||| ||||| || || ||||||||||||| |
|
|
| T |
9384383 |
agctttgcaagtccaaaatccgaaacctttggaacaaactcttcgtctagaagaatattatgaggcttgatatcaaaatgta |
9384464 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 131 - 168
Target Start/End: Complemental strand, 49714604 - 49714567
Alignment:
| Q |
131 |
accatctctaaaagcatcattccataactataaacatc |
168 |
Q |
| |
|
||||| ||||||| |||||||||||||||||||||||| |
|
|
| T |
49714604 |
accatttctaaaaccatcattccataactataaacatc |
49714567 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 284 - 363
Target Start/End: Complemental strand, 15063408 - 15063329
Alignment:
| Q |
284 |
gcaagtccaaaatctgaaatctttggacataaattttcatctaaaagaatgttatgtggttttatatcaaaatgtaaaat |
363 |
Q |
| |
|
||||| |||||||| || || ||||| || |||| |||||||||||||||||| || ||||| ||||||| ||| ||||| |
|
|
| T |
15063408 |
gcaagaccaaaatcagatatttttgggcaaaaatcttcatctaaaagaatgttttgaggtttgatatcaagatgcaaaat |
15063329 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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