View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1125_high_22 (Length: 463)

Name: NF1125_high_22
Description: NF1125
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1125_high_22
NF1125_high_22
[»] chr2 (15 HSPs)
chr2 (246-434)||(14412593-14412773)
chr2 (10-74)||(14412899-14412963)
chr2 (120-183)||(14121885-14121948)
chr2 (107-181)||(25423821-25423895)
chr2 (98-184)||(42745097-42745183)
chr2 (96-169)||(18105342-18105414)
chr2 (107-184)||(37179991-37180068)
chr2 (128-184)||(12233086-12233142)
chr2 (98-181)||(31579210-31579293)
chr2 (109-183)||(7020352-7020426)
chr2 (107-184)||(5394470-5394547)
chr2 (103-184)||(9438122-9438203)
chr2 (96-184)||(17981572-17981659)
chr2 (98-170)||(37092176-37092248)
chr2 (102-181)||(13835442-13835521)
[»] chr5 (10 HSPs)
chr5 (107-184)||(10592001-10592078)
chr5 (98-184)||(5123479-5123565)
chr5 (129-184)||(18909313-18909368)
chr5 (102-184)||(29553613-29553695)
chr5 (128-184)||(36212970-36213026)
chr5 (98-181)||(25983742-25983825)
chr5 (107-169)||(22187988-22188050)
chr5 (107-184)||(30784976-30785053)
chr5 (107-184)||(31113408-31113485)
chr5 (127-184)||(32313116-32313173)
[»] chr3 (15 HSPs)
chr3 (96-184)||(20861322-20861410)
chr3 (98-184)||(27763795-27763881)
chr3 (105-184)||(30995953-30996032)
chr3 (98-184)||(22288309-22288395)
chr3 (98-169)||(8757433-8757504)
chr3 (98-184)||(25224773-25224859)
chr3 (107-182)||(48204301-48204376)
chr3 (96-170)||(44941244-44941317)
chr3 (107-184)||(38331202-38331279)
chr3 (107-183)||(55123172-55123248)
chr3 (107-181)||(43621301-43621376)
chr3 (98-184)||(22288595-22288681)
chr3 (107-181)||(23189516-23189590)
chr3 (104-181)||(1642683-1642760)
chr3 (129-170)||(15283159-15283200)
[»] chr6 (12 HSPs)
chr6 (96-181)||(28099320-28099405)
chr6 (96-184)||(12836876-12836964)
chr6 (104-184)||(31412196-31412276)
chr6 (96-184)||(12411222-12411310)
chr6 (96-154)||(9536871-9536929)
chr6 (139-183)||(28933213-28933257)
chr6 (131-169)||(423744-423782)
chr6 (118-176)||(21028843-21028901)
chr6 (118-176)||(21028980-21029038)
chr6 (104-184)||(1534326-1534404)
chr6 (115-184)||(25084108-25084177)
chr6 (115-183)||(24450007-24450075)
[»] chr1 (16 HSPs)
chr1 (98-184)||(36806685-36806771)
chr1 (107-184)||(15642529-15642606)
chr1 (98-184)||(42297423-42297509)
chr1 (99-184)||(9780971-9781056)
chr1 (128-184)||(12035624-12035680)
chr1 (115-183)||(46864166-46864234)
chr1 (107-152)||(18428132-18428177)
chr1 (107-184)||(44913183-44913260)
chr1 (107-162)||(16756178-16756233)
chr1 (101-184)||(22022194-22022277)
chr1 (107-184)||(28724746-28724823)
chr1 (140-184)||(11530670-11530714)
chr1 (140-184)||(36522259-36522303)
chr1 (121-183)||(2044472-2044534)
chr1 (126-175)||(15675895-15675944)
chr1 (120-184)||(17888216-17888280)
[»] chr4 (14 HSPs)
chr4 (98-184)||(31307047-31307133)
chr4 (107-184)||(9012344-9012421)
chr4 (107-184)||(14854679-14854756)
chr4 (107-184)||(38766163-38766240)
chr4 (98-181)||(35972420-35972503)
chr4 (107-184)||(33529331-33529408)
chr4 (112-184)||(13948587-13948659)
chr4 (96-168)||(35334077-35334149)
chr4 (106-184)||(17135170-17135248)
chr4 (107-181)||(51626296-51626370)
chr4 (107-184)||(46016223-46016300)
chr4 (127-184)||(38844178-38844235)
chr4 (128-172)||(25768699-25768743)
chr4 (96-184)||(45994596-45994684)
[»] chr8 (15 HSPs)
chr8 (107-184)||(4125014-4125091)
chr8 (107-184)||(7839243-7839320)
chr8 (98-184)||(13468726-13468812)
chr8 (98-184)||(2744007-2744093)
chr8 (106-184)||(30055990-30056068)
chr8 (120-184)||(36994503-36994567)
chr8 (109-184)||(12958077-12958152)
chr8 (111-184)||(19715719-19715793)
chr8 (129-181)||(21032373-21032425)
chr8 (112-184)||(30936078-30936150)
chr8 (107-158)||(39086852-39086903)
chr8 (131-165)||(8521791-8521825)
chr8 (126-184)||(15683003-15683061)
chr8 (128-170)||(24988587-24988629)
chr8 (98-152)||(40320202-40320256)
[»] chr7 (14 HSPs)
chr7 (98-184)||(29059879-29059965)
chr7 (98-184)||(31492177-31492263)
chr7 (98-170)||(11486725-11486797)
chr7 (96-183)||(35707921-35708008)
chr7 (98-152)||(28665196-28665250)
chr7 (120-182)||(29428795-29428857)
chr7 (107-164)||(21747030-21747087)
chr7 (107-184)||(37339723-37339800)
chr7 (126-181)||(23933660-23933715)
chr7 (107-150)||(36821070-36821113)
chr7 (107-184)||(19477242-19477316)
chr7 (107-181)||(42741799-42741872)
chr7 (111-184)||(24172283-24172356)
chr7 (128-184)||(8839292-8839348)
[»] scaffold0182 (1 HSPs)
scaffold0182 (98-184)||(26405-26491)
[»] scaffold0009 (1 HSPs)
scaffold0009 (107-184)||(27215-27292)


Alignment Details
Target: chr2 (Bit Score: 118; Significance: 5e-60; HSPs: 15)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 246 - 434
Target Start/End: Complemental strand, 14412773 - 14412593
Alignment:
Q  246 ttgttagtattacaacgcccatcttttttaattgattatgtggtgtgnnnnnnnctttcatttctccaacttcttatctcttggttcaaatcaaatcact 345  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||     ||    
T  14412773 ttgttagtattacaacgcccgtcttttttaattgattatgtggtgtgtttttttctttcatttctccaacttcttatctcttggttcaaatca-----ct 14412679  T
Q  346 tgagctttatataacgcccgtcttttctaattgattaaatcctatttttcccttttgtctattctttgggatgctcactcaatcttatg 434  Q
    |||||||||||     ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14412678 tgagctttataat---cccgtcttttcaaattgattaaatcctatttttcccttttgtctattctttgggatgctcactcaatcttatg 14412593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 10 - 74
Target Start/End: Complemental strand, 14412963 - 14412899
Alignment:
Q  10 tcataggtattagcattaaactataaaacaagaatattggtgctggagttcttttttaataattg 74  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14412963 tcataggtattagcattaaactataaaacaagaatattggtgctggagttcttttttaataattg 14412899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 120 - 183
Target Start/End: Original strand, 14121885 - 14121948
Alignment:
Q  120 caactccagagactaatccctcgagcattgtggaactcaaatgggcggcaaattctccctaaga 183  Q
    ||||| || |||||||||||||||||||||||| ||||||||||||||||| ||||| ||||||    
T  14121885 caacttcatagactaatccctcgagcattgtgggactcaaatgggcggcaagttctctctaaga 14121948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 107 - 181
Target Start/End: Complemental strand, 25423895 - 25423821
Alignment:
Q  107 tatcctccgcgcacaactccagagactaatccctcgagcattgtggaactcaaatgggcggcaaattctccctaa 181  Q
    |||||||| ||| ||||| | ||||||||||||||||||||||||| || |||||||||||||  ||||||||||    
T  25423895 tatcctccacgcgcaactgctgagactaatccctcgagcattgtgggacccaaatgggcggcaggttctccctaa 25423821  T

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Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 98 - 184
Target Start/End: Original strand, 42745097 - 42745183
Alignment:
Q  98 taaactggatatcctccgcgcacaactccagagactaatccctcgagcattgtggaactcaaatgggcggcaaattctccctaagag 184  Q
    ||||| || |||||||||||| ||||| | |||||||||||||||| ||||||||||| ||||| ||| ||| | ||||||||||||    
T  42745097 taaaccgggtatcctccgcgcgcaactgctgagactaatccctcgaccattgtggaacccaaataggcagcagactctccctaagag 42745183  T

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Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 96 - 169
Target Start/End: Original strand, 18105342 - 18105414
Alignment:
Q  96 tataaactggatatcctccgcgcacaactccagagactaatccctcgagcattgtggaactcaaatgggcggca 169  Q
    ||||||| ||||||||||||||| ||||| | ||||||||||||||||| ||||||  ||||||||||||||||    
T  18105342 tataaaccggatatcctccgcgcgcaactgc-gagactaatccctcgagtattgtgagactcaaatgggcggca 18105414  T

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Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 107 - 184
Target Start/End: Original strand, 37179991 - 37180068
Alignment:
Q  107 tatcctccgcgcacaactccagagactaatccctcgagcattgtggaactcaaatgggcggcaaattctccctaagag 184  Q
    |||||||||||| ||| | |  |||||||||||||||| ||||||| |||||||||||||||| | ||||||||||||    
T  37179991 tatcctccgcgcgcaagtgcgtagactaatccctcgagtattgtgggactcaaatgggcggcacactctccctaagag 37180068  T

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Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 128 - 184
Target Start/End: Original strand, 12233086 - 12233142
Alignment:
Q  128 gagactaatccctcgagcattgtggaactcaaatgggcggcaaattctccctaagag 184  Q
    |||||||||||||||||||||||| |||| |||||||||||||| |||| |||||||    
T  12233086 gagactaatccctcgagcattgtgaaacttaaatgggcggcaaactctctctaagag 12233142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 98 - 181
Target Start/End: Original strand, 31579210 - 31579293
Alignment:
Q  98 taaactggatatcctccgcgcacaactccagagactaatccctcgagcattgtggaactcaaatgggcggcaaattctccctaa 181  Q
    ||||| || |||||||||||| ||||| | || |||||| ||||||||||||||| ||| |||||||||||| | |||||||||    
T  31579210 taaaccgggtatcctccgcgcgcaactgcggaaactaattcctcgagcattgtgggacttaaatgggcggcagactctccctaa 31579293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 109 - 183
Target Start/End: Original strand, 7020352 - 7020426
Alignment:
Q  109 tcctccgcgcacaactccagagactaatccctcgagcattgtggaactcaaatgggcggcaaattctccctaaga 183  Q
    |||||||||| |||||   |||||||||| |||||||||||| | || |||||||||||||| ||||||||||||    
T  7020352 tcctccgcgcgcaactgtcgagactaatcactcgagcattgtaggacccaaatgggcggcaagttctccctaaga 7020426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 107 - 184
Target Start/End: Complemental strand, 5394547 - 5394470
Alignment:
Q  107 tatcctccgcgcacaactccagagactaatccctcgagcattgtggaactcaaatgggcggcaaattctccctaagag 184  Q
    |||||||||||  ||||| | |||||||||||| |||||||||||| || |||||||||||||   ||||||||||||    
T  5394547 tatcctccgcgtgcaactgcggagactaatcccacgagcattgtgggacccaaatgggcggcaggctctccctaagag 5394470  T

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Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 103 - 184
Target Start/End: Original strand, 9438122 - 9438203
Alignment:
Q  103 tggatatcctccgcgcacaactccagagactaatccctcgagcattgtggaactcaaatgggcggcaaattctccctaagag 184  Q
    |||||||||||||||| |||||   || ||||||||||| |||||||||| || |||||||||||||  |||| ||||||||    
T  9438122 tggatatcctccgcgcgcaactgtggaaactaatccctcaagcattgtgggacacaaatgggcggcaggttcttcctaagag 9438203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 96 - 184
Target Start/End: Complemental strand, 17981659 - 17981572
Alignment:
Q  96 tataaactggatatcctccgcgcacaactccagagactaatccctcgagcattgtggaactcaaatgggcggcaaattctccctaagag 184  Q
    ||||||| || |||||||||||| ||||| | |||||||||| |||||||||||||| || |||||  |||||||  ||||||||||||    
T  17981659 tataaaccgggtatcctccgcgcgcaactgcggagactaatctctcgagcattgtgggacccaaat-tgcggcaagctctccctaagag 17981572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 98 - 170
Target Start/End: Original strand, 37092176 - 37092248
Alignment:
Q  98 taaactggatatcctccgcgcacaactccagagactaatccctcgagcattgtggaactcaaatgggcggcaa 170  Q
    ||||| || ||||||||| |||||||| | ||||||||||||||||||| ||||| || ||||||| ||||||    
T  37092176 taaaccgggtatcctccgtgcacaactgcggagactaatccctcgagcactgtgggacccaaatggacggcaa 37092248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 102 - 181
Target Start/End: Original strand, 13835442 - 13835521
Alignment:
Q  102 ctggatatcctccgcgcacaactccagagactaatccctcgagcattgtggaactcaaatgggcggcaaattctccctaa 181  Q
    |||| |||||||| | ||||||| |||| ||||||||||| | |||||||| |||||||||  ||||||  |||||||||    
T  13835442 ctgggtatcctccacacacaactgcagaaactaatccctcaaacattgtgggactcaaatgaacggcaagctctccctaa 13835521  T

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Target: chr5 (Bit Score: 58; Significance: 3e-24; HSPs: 10)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 107 - 184
Target Start/End: Complemental strand, 10592078 - 10592001
Alignment:
Q  107 tatcctccgcgcacaactccagagactaatccctcgagcattgtggaactcaaatgggcggcaaattctccctaagag 184  Q
    |||||||||||| ||||| ||||||||||||||||||||||||||| |||||||||||||||| | ||||||||||||    
T  10592078 tatcctccgcgcgcaactgcagagactaatccctcgagcattgtgggactcaaatgggcggcagactctccctaagag 10592001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 98 - 184
Target Start/End: Original strand, 5123479 - 5123565
Alignment:
Q  98 taaactggatatcctccgcgcacaactccagagactaatccctcgagcattgtggaactcaaatgggcggcaaattctccctaagag 184  Q
    ||||| || |||||||||||| ||||| | ||||||||||||||||||||||||| || |||||||||||||   ||||||||||||    
T  5123479 taaacagggtatcctccgcgcgcaactgcggagactaatccctcgagcattgtgggacccaaatgggcggcaggctctccctaagag 5123565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 129 - 184
Target Start/End: Original strand, 18909313 - 18909368
Alignment:
Q  129 agactaatccctcgagcattgtggaactcaaatgggcggcaaattctccctaagag 184  Q
    |||||||||||||||||||||||| | ||||||| |||||||||||||||||||||    
T  18909313 agactaatccctcgagcattgtgggattcaaatgagcggcaaattctccctaagag 18909368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 102 - 184
Target Start/End: Complemental strand, 29553695 - 29553613
Alignment:
Q  102 ctggatatcctccgcgcacaactccagagactaatccctcgagcattgtggaactcaaatgggcggcaaattctccctaagag 184  Q
    |||| |||||||| ||||||||| |||||||||||| || ||||||| ||| || ||||||| || |||| ||||||||||||    
T  29553695 ctgggtatcctccacgcacaactgcagagactaatctcttgagcattctgggacccaaatggacgacaaactctccctaagag 29553613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 128 - 184
Target Start/End: Complemental strand, 36213026 - 36212970
Alignment:
Q  128 gagactaatccctcgagcattgtggaactcaaatgggcggcaaattctccctaagag 184  Q
    ||||| ||||||||||||||||||| ||  |||||||||||||| ||||||||||||    
T  36213026 gagaccaatccctcgagcattgtgggacctaaatgggcggcaaactctccctaagag 36212970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 98 - 181
Target Start/End: Complemental strand, 25983825 - 25983742
Alignment:
Q  98 taaactggatatcctccgcgcacaactccagagactaatccctcgagcattgtggaactcaaatgggcggcaaattctccctaa 181  Q
    ||||| || ||||||||| |  ||||| | |||||||||| ||||| |||| ||| |||||||||||||||||  |||||||||    
T  25983825 taaaccgggtatcctccgtgtgcaactgcggagactaatcactcgaacattatgggactcaaatgggcggcaagctctccctaa 25983742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 107 - 169
Target Start/End: Original strand, 22187988 - 22188050
Alignment:
Q  107 tatcctccgcgcacaactccagagactaatccctcgagcattgtggaactcaaatgggcggca 169  Q
    |||||||||||| ||||| | |||||||||||||| || ||||||| || ||||| |||||||    
T  22187988 tatcctccgcgcgcaactgcggagactaatccctctagtattgtgggacccaaataggcggca 22188050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 107 - 184
Target Start/End: Original strand, 30784976 - 30785053
Alignment:
Q  107 tatcctccgcgcacaactccagagactaatccctcgagcattgtggaactcaaatgggcggcaaattctccctaagag 184  Q
    |||||||||||| ||||| | ||||||||||||| || |||||||  ||  ||||||  |||| ||||||||||||||    
T  30784976 tatcctccgcgcgcaactgcggagactaatcccttgaacattgtgagacctaaatggatggcagattctccctaagag 30785053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 107 - 184
Target Start/End: Complemental strand, 31113485 - 31113408
Alignment:
Q  107 tatcctccgcgcacaactccagagactaatccctcgagcattgtggaactcaaatgggcggcaaattctccctaagag 184  Q
    |||||| ||||| ||||| | ||||||||||||||||| ||||||| |  ||||||||||| |   ||||||||||||    
T  31113485 tatccttcgcgcgcaactgcggagactaatccctcgagtattgtgggatccaaatgggcggtaggctctccctaagag 31113408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 127 - 184
Target Start/End: Original strand, 32313116 - 32313173
Alignment:
Q  127 agagactaatccctcgagcattgtggaactcaaatgggcggcaaattctccctaagag 184  Q
    |||||||||||||||||| ||||| | ||| |||||||| ||||| ||||| ||||||    
T  32313116 agagactaatccctcgagtattgtaggacttaaatgggcagcaaactctccttaagag 32313173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 57; Significance: 1e-23; HSPs: 15)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 96 - 184
Target Start/End: Complemental strand, 20861410 - 20861322
Alignment:
Q  96 tataaactggatatcctccgcgcacaactccagagactaatccctcgagcattgtggaactcaaatgggcggcaaattctccctaagag 184  Q
    |||||||||| |||||||||||||||||| | ||||||||||||||||||||| |||||| |||||||||||||   ||||||||||||    
T  20861410 tataaactgggtatcctccgcgcacaactgcggagactaatccctcgagcattatggaacccaaatgggcggcaggctctccctaagag 20861322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 98 - 184
Target Start/End: Complemental strand, 27763881 - 27763795
Alignment:
Q  98 taaactggatatcctccgcgcacaactccagagactaatccctcgagcattgtggaactcaaatgggcggcaaattctccctaagag 184  Q
    ||||| |||||||||| |||| ||||| | ||||||||||||||||||||||||| |||||||||| ||||| | ||||||||||||    
T  27763881 taaaccggatatcctctgcgcgcaactgcggagactaatccctcgagcattgtgggactcaaatggacggcagactctccctaagag 27763795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 105 - 184
Target Start/End: Original strand, 30995953 - 30996032
Alignment:
Q  105 gatatcctccgcgcacaactccagagactaatccctcgagcattgtggaactcaaatgggcggcaaattctccctaagag 184  Q
    |||||||||||||| ||||| | ||||||||||||||||||||||||| || || |||||||||| | ||||||||||||    
T  30995953 gatatcctccgcgcgcaactgcggagactaatccctcgagcattgtgggacccagatgggcggcagactctccctaagag 30996032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 98 - 184
Target Start/End: Complemental strand, 22288395 - 22288309
Alignment:
Q  98 taaactggatatcctccgcgcacaactccagagactaatccctcgagcattgtggaactcaaatgggcggcaaattctccctaagag 184  Q
    ||||| || |||||||||||||||||| ||||||||||| ||| ||| |||||| ||||||||||| || ||| |||||||||||||    
T  22288395 taaaccgggtatcctccgcgcacaactgcagagactaattccttgagtattgtgtaactcaaatggacgacaagttctccctaagag 22288309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 98 - 169
Target Start/End: Complemental strand, 8757504 - 8757433
Alignment:
Q  98 taaactggatatcctccgcgcacaactccagagactaatccctcgagcattgtggaactcaaatgggcggca 169  Q
    ||||| || |||||||||||| ||||| | ||||||||||||||||||||||||| || ||||| |||||||    
T  8757504 taaaccgggtatcctccgcgcgcaactgcggagactaatccctcgagcattgtgggacccaaataggcggca 8757433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 98 - 184
Target Start/End: Complemental strand, 25224859 - 25224773
Alignment:
Q  98 taaactggatatcctccgcgcacaactccagagactaatccctcgagcattgtggaactcaaatgggcggcaaattctccctaagag 184  Q
    ||||| || |||||||||||  ||||| | ||||||||||||| ||||||||||| ||  ||||||||||||| |||||| ||||||    
T  25224859 taaaccgggtatcctccgcgtgcaactgcggagactaatcccttgagcattgtgggacctaaatgggcggcaagttctccttaagag 25224773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 107 - 182
Target Start/End: Original strand, 48204301 - 48204376
Alignment:
Q  107 tatcctccgcgcacaactccagagactaatccctcgagcattgtggaactcaaatgggcggcaaattctccctaag 182  Q
    |||||||||||| ||||| | || |||||||||| |||||||||||||| ||||||| || |||  ||||||||||    
T  48204301 tatcctccgcgcgcaactgcggaaactaatcccttgagcattgtggaacccaaatggacgacaagctctccctaag 48204376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 96 - 170
Target Start/End: Original strand, 44941244 - 44941317
Alignment:
Q  96 tataaactggatatcctccgcgcacaactccagagactaatccctcgagcattgtggaactcaaatgggcggcaa 170  Q
    ||||||||||||||||||||||| ||||| | ||||||||| ||||||||||  ||| |  ||||||||||||||    
T  44941244 tataaactggatatcctccgcgcgcaactgcggagactaat-cctcgagcataatgggatccaaatgggcggcaa 44941317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 107 - 184
Target Start/End: Complemental strand, 38331279 - 38331202
Alignment:
Q  107 tatcctccgcgcacaactccagagactaatccctcgagcattgtggaactcaaatgggcggcaaattctccctaagag 184  Q
    |||||||||||  ||||| | |||||||||||||| | |||||||| || ||||||||||||||  |||| |||||||    
T  38331279 tatcctccgcgtgcaactgcggagactaatccctcaaacattgtgggacccaaatgggcggcaagctctctctaagag 38331202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 107 - 183
Target Start/End: Complemental strand, 55123248 - 55123172
Alignment:
Q  107 tatcctccgcgcacaactccagagactaatccctcgagcattgtggaactcaaatgggcggcaaattctccctaaga 183  Q
    |||||||||||| ||||| |  |||||||||||||||||||||||  || ||||||||  ||||  |||||||||||    
T  55123248 tatcctccgcgcgcaactgcgaagactaatccctcgagcattgtgagacccaaatgggtagcaagctctccctaaga 55123172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 107 - 181
Target Start/End: Original strand, 43621301 - 43621376
Alignment:
Q  107 tatcctccgcgcacaactccagagactaatccctcgagca-ttgtggaactcaaatgggcggcaaattctccctaa 181  Q
    ||||||| |||| ||||| ||||||||||||||||||||| |||||  ||| ||||||| |||||  |||||||||    
T  43621301 tatcctctgcgcgcaactacagagactaatccctcgagcatttgtgagacttaaatgggaggcaagctctccctaa 43621376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 98 - 184
Target Start/End: Complemental strand, 22288681 - 22288595
Alignment:
Q  98 taaactggatatcctccgcgcacaactccagagactaatccctcgagcattgtggaactcaaatgggcggcaaattctccctaagag 184  Q
    ||||| || |||||||||||||||||| |||||||||||   ||||| |||| | ||||||||||  || ||| ||||| |||||||    
T  22288681 taaaccgggtatcctccgcgcacaactgcagagactaatttgtcgagtattgagtaactcaaatgtacgacaagttctcactaagag 22288595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 107 - 181
Target Start/End: Original strand, 23189516 - 23189590
Alignment:
Q  107 tatcctccgcgcacaactccagagactaatccctcgagcattgtggaactcaaatgggcggcaaattctccctaa 181  Q
    |||||| |||||||||||  ||||||||||| ||||| | |||||  ||||||||| |||||||| || ||||||    
T  23189516 tatccttcgcgcacaactatagagactaatctctcgaaccttgtgagactcaaatgagcggcaaactcaccctaa 23189590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 104 - 181
Target Start/End: Complemental strand, 1642760 - 1642683
Alignment:
Q  104 ggatatcctccgcgcacaactccagagactaatccctcgagcattgtggaactcaaatgggcggcaaattctccctaa 181  Q
    ||||||||||||||| ||||| | || ||||||||||| || ||||||| || ||||||| ||| | | |||||||||    
T  1642760 ggatatcctccgcgcgcaactgcggaaactaatccctcaagtattgtgggacccaaatggacggtagactctccctaa 1642683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 129 - 170
Target Start/End: Complemental strand, 15283200 - 15283159
Alignment:
Q  129 agactaatccctcgagcattgtggaactcaaatgggcggcaa 170  Q
    ||||||||| |||||||||||||| || ||||||||||||||    
T  15283200 agactaatctctcgagcattgtgggacccaaatgggcggcaa 15283159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 54; Significance: 8e-22; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 96 - 181
Target Start/End: Complemental strand, 28099405 - 28099320
Alignment:
Q  96 tataaactggatatcctccgcgcacaactccagagactaatccctcgagcattgtggaactcaaatgggcggcaaattctccctaa 181  Q
    |||||||||| |||||||||| | ||||| | ||||||||||||||||||||| |||||||||||||| || ||||||||||||||    
T  28099405 tataaactgggtatcctccgctcgcaactgcggagactaatccctcgagcattatggaactcaaatggacgacaaattctccctaa 28099320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 96 - 184
Target Start/End: Original strand, 12836876 - 12836964
Alignment:
Q  96 tataaactggatatcctccgcgcacaactccagagactaatccctcgagcattgtggaactcaaatgggcggcaaattctccctaagag 184  Q
    ||||||| || |||||||||||| |||||   |||||||||||||| |||||||||| || |||||||||||| |  ||||||||||||    
T  12836876 tataaaccgggtatcctccgcgcgcaactggggagactaatccctcaagcattgtgggacccaaatgggcggcgagctctccctaagag 12836964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 104 - 184
Target Start/End: Complemental strand, 31412276 - 31412196
Alignment:
Q  104 ggatatcctccgcgcacaactccagagactaatccctcgagcattgtggaactcaaatgggcggcaaattctccctaagag 184  Q
    |||||||||||| || |||||   |||||||||  ||||||||||||||||| ||||||||||||| | ||||||||||||    
T  31412276 ggatatcctccgtgcgcaactgtggagactaatttctcgagcattgtggaacccaaatgggcggcagactctccctaagag 31412196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 96 - 184
Target Start/End: Complemental strand, 12411310 - 12411222
Alignment:
Q  96 tataaactggatatcctccgcgcacaactccagagactaatccctcgagcattgtggaactcaaatgggcggcaaattctccctaagag 184  Q
    ||||||| || ||||| |||||| |||||   |||||||||||||| |||||||||| ||| |||||||||||| | ||| ||||||||    
T  12411310 tataaaccgggtatcccccgcgcgcaactgtggagactaatccctcaagcattgtgggacttaaatgggcggcagactcttcctaagag 12411222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 96 - 154
Target Start/End: Complemental strand, 9536929 - 9536871
Alignment:
Q  96 tataaactggatatcctccgcgcacaactccagagactaatccctcgagcattgtggaa 154  Q
    |||||| | ||||||||||| || ||||| | |||||||||||||||||||||||||||    
T  9536929 tataaatttgatatcctccgagcgcaactgcggagactaatccctcgagcattgtggaa 9536871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 139 - 183
Target Start/End: Complemental strand, 28933257 - 28933213
Alignment:
Q  139 ctcgagcattgtggaactcaaatgggcggcaaattctccctaaga 183  Q
    ||||||||||||||||| ||||||||||||||| |||| ||||||    
T  28933257 ctcgagcattgtggaacccaaatgggcggcaaactctctctaaga 28933213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 131 - 169
Target Start/End: Complemental strand, 423782 - 423744
Alignment:
Q  131 actaatccctcgagcattgtggaactcaaatgggcggca 169  Q
    |||||||||||||||||||||| |||||||||| |||||    
T  423782 actaatccctcgagcattgtgggactcaaatggacggca 423744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 118 - 176
Target Start/End: Original strand, 21028843 - 21028901
Alignment:
Q  118 cacaactccagagactaatccctcgagcattgtggaactcaaatgggcggcaaattctc 176  Q
    ||||||| | ||||||||||||| |||| |||||| || ||||||||||||||| ||||    
T  21028843 cacaactgcggagactaatcccttgagccttgtggcacccaaatgggcggcaaactctc 21028901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 118 - 176
Target Start/End: Original strand, 21028980 - 21029038
Alignment:
Q  118 cacaactccagagactaatccctcgagcattgtggaactcaaatgggcggcaaattctc 176  Q
    ||||||| | ||||||||||||| |||| |||||| || ||||||||||||||| ||||    
T  21028980 cacaactgcggagactaatcccttgagccttgtggcacccaaatgggcggcaaactctc 21029038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 104 - 184
Target Start/End: Complemental strand, 1534404 - 1534326
Alignment:
Q  104 ggatatcctccgcgcacaactccagagactaatccctcgagcattgtggaactcaaatgggcggcaaattctccctaagag 184  Q
    ||||||||||||||||  ||| | ||||  ||| ||||||||||||||  ||||||||||||| |||  ||||||||||||    
T  1534404 ggatatcctccgcgca--actgcggagatcaattcctcgagcattgtgcgactcaaatgggcgacaagctctccctaagag 1534326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 115 - 184
Target Start/End: Complemental strand, 25084177 - 25084108
Alignment:
Q  115 gcgcacaactccagagactaatccctcgagcattgtggaactcaaatgggcggcaaattctccctaagag 184  Q
    ||||| |||| || ||||||||| |||||||||||||||||| ||||||  | |||  ||||||||||||    
T  25084177 gcgcataactgcatagactaatctctcgagcattgtggaacttaaatggatgacaagctctccctaagag 25084108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 115 - 183
Target Start/End: Complemental strand, 24450075 - 24450007
Alignment:
Q  115 gcgcacaactccagagactaatccctcgagcattgtggaactcaaatgggcggcaaattctccctaaga 183  Q
    |||| |||||||| ||||||||| ||| ||  || ||||||||||||||| |||||| ||||| |||||    
T  24450075 gcgcgcaactccaaagactaatctctcaagtcttatggaactcaaatgggtggcaaactctccttaaga 24450007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 51; Significance: 5e-20; HSPs: 16)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 98 - 184
Target Start/End: Complemental strand, 36806771 - 36806685
Alignment:
Q  98 taaactggatatcctccgcgcacaactccagagactaatccctcgagcattgtggaactcaaatgggcggcaaattctccctaagag 184  Q
    ||||| || |||||||||||  ||||| |||||||||||||||||||||||||||||| ||||||||||||| |  |||||||||||    
T  36806771 taaaccgggtatcctccgcgtgcaactgcagagactaatccctcgagcattgtggaacccaaatgggcggcagacactccctaagag 36806685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 107 - 184
Target Start/End: Complemental strand, 15642606 - 15642529
Alignment:
Q  107 tatcctccgcgcacaactccagagactaatccctcgagcattgtggaactcaaatgggcggcaaattctccctaagag 184  Q
    |||||||||||| ||||| | |||| ||||| |||||||||||||| || ||||||||||||||| ||||||||||||    
T  15642606 tatcctccgcgcgcaactgcggagaataatctctcgagcattgtgggacccaaatgggcggcaaactctccctaagag 15642529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 98 - 184
Target Start/End: Original strand, 42297423 - 42297509
Alignment:
Q  98 taaactggatatcctccgcgcacaactccagagactaatccctcgagcattgtggaactcaaatgggcggcaaattctccctaagag 184  Q
    |||||| | |||||||||||| ||||| | ||||||||||||||||||||||||  || ||||||| ||||| | ||||||||||||    
T  42297423 taaactaggtatcctccgcgcgcaactgcggagactaatccctcgagcattgtgagacccaaatggacggcagactctccctaagag 42297509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 99 - 184
Target Start/End: Original strand, 9780971 - 9781056
Alignment:
Q  99 aaactggatatcctccgcgcacaactccagagactaatccctcgagcattgtggaactcaaatgggcggcaaattctccctaagag 184  Q
    ||||||| ||| |||||||| ||||| | || |||||||||||||||||||||| || ||||||||||||  | ||||||||||||    
T  9780971 aaactgggtattctccgcgcccaactacggatactaatccctcgagcattgtgggacccaaatgggcggccgactctccctaagag 9781056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 128 - 184
Target Start/End: Complemental strand, 12035680 - 12035624
Alignment:
Q  128 gagactaatccctcgagcattgtggaactcaaatgggcggcaaattctccctaagag 184  Q
    ||||||||||||||||||||||||| || ||||||||||||| | ||||||||||||    
T  12035680 gagactaatccctcgagcattgtgggacccaaatgggcggcagactctccctaagag 12035624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 115 - 183
Target Start/End: Complemental strand, 46864234 - 46864166
Alignment:
Q  115 gcgcacaactccagagactaatccctcgagcattgtggaactcaaatgggcggcaaattctccctaaga 183  Q
    |||| ||||| |||||||||||||||||| ||||||| ||| ||||||| |||||| ||||||||||||    
T  46864234 gcgcgcaactgcagagactaatccctcgaacattgtgaaacccaaatggacggcaagttctccctaaga 46864166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 107 - 152
Target Start/End: Original strand, 18428132 - 18428177
Alignment:
Q  107 tatcctccgcgcacaactccagagactaatccctcgagcattgtgg 152  Q
    |||||||||||| ||||| |||||||||||||||||||||||||||    
T  18428132 tatcctccgcgcgcaactgcagagactaatccctcgagcattgtgg 18428177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 107 - 184
Target Start/End: Complemental strand, 44913260 - 44913183
Alignment:
Q  107 tatcctccgcgcacaactccagagactaatccctcgagcattgtggaactcaaatgggcggcaaattctccctaagag 184  Q
    ||||||| ||||  |||| |||||||||||| |||||||||||||| || || |||||||||||  ||||||||||||    
T  44913260 tatcctctgcgcgtaactgcagagactaatctctcgagcattgtgggacccagatgggcggcaagctctccctaagag 44913183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 107 - 162
Target Start/End: Complemental strand, 16756233 - 16756178
Alignment:
Q  107 tatcctccgcgcacaactccagagactaatccctcgagcattgtggaactcaaatg 162  Q
    |||||||||||| ||||| | ||||||||||||||||||||||||| || ||||||    
T  16756233 tatcctccgcgcgcaactgcggagactaatccctcgagcattgtgggacccaaatg 16756178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 101 - 184
Target Start/End: Complemental strand, 22022277 - 22022194
Alignment:
Q  101 actggatatcctccgcgcacaactccagagactaatccctcgagcattgtggaactcaaatgggcggcaaattctccctaagag 184  Q
    ||||| |||||||| ||  ||||| | ||||||||||||||||  ||||||| || |||||||| ||||| |||||||||||||    
T  22022277 actgggtatcctccacgtgcaactgcggagactaatccctcgaatattgtgggacccaaatgggtggcaagttctccctaagag 22022194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 107 - 184
Target Start/End: Complemental strand, 28724823 - 28724746
Alignment:
Q  107 tatcctccgcgcacaactccagagactaatccctcgagcattgtggaactcaaatgggcggcaaattctccctaagag 184  Q
    |||||||||||| ||| | | |||||||||||||||| |||||| | |||||||||| ||||| | ||| ||||||||    
T  28724823 tatcctccgcgcgcaattgcggagactaatccctcgaacattgtaggactcaaatggacggcagactcttcctaagag 28724746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 140 - 184
Target Start/End: Complemental strand, 11530714 - 11530670
Alignment:
Q  140 tcgagcattgtggaactcaaatgggcggcaaattctccctaagag 184  Q
    |||||||||||||||||||||||| ||||||| ||||| ||||||    
T  11530714 tcgagcattgtggaactcaaatggacggcaaactctccttaagag 11530670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 140 - 184
Target Start/End: Original strand, 36522259 - 36522303
Alignment:
Q  140 tcgagcattgtggaactcaaatgggcggcaaattctccctaagag 184  Q
    ||||||||||||| |||||||||| ||||||| ||||||||||||    
T  36522259 tcgagcattgtgggactcaaatggacggcaaactctccctaagag 36522303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 121 - 183
Target Start/End: Complemental strand, 2044534 - 2044472
Alignment:
Q  121 aactccagagactaatccctcgagcattgtggaactcaaatgggcggcaaattctccctaaga 183  Q
    |||| |||||||||||| || |||||||||||||| ||||| ||||| ||  |||||||||||    
T  2044534 aactgcagagactaatctcttgagcattgtggaacccaaataggcggtaatctctccctaaga 2044472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 126 - 175
Target Start/End: Complemental strand, 15675944 - 15675895
Alignment:
Q  126 cagagactaatccctcgagcattgtggaactcaaatgggcggcaaattct 175  Q
    |||||||||||| |||||| ||||| ||| | ||||||||||||||||||    
T  15675944 cagagactaatctctcgagtattgtagaaattaaatgggcggcaaattct 15675895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 120 - 184
Target Start/End: Complemental strand, 17888280 - 17888216
Alignment:
Q  120 caactccagagactaatccctcgagcattgtggaactcaaatgggcggcaaattctccctaagag 184  Q
    ||||| |||||||||||| ||||| |||| ||| |||||||| ||||||||| |||  |||||||    
T  17888280 caactacagagactaatcactcgatcattttgggactcaaattggcggcaaactcttactaagag 17888216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 47; Significance: 1e-17; HSPs: 14)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 98 - 184
Target Start/End: Original strand, 31307047 - 31307133
Alignment:
Q  98 taaactggatatcctccgcgcacaactccagagactaatccctcgagcattgtggaactcaaatgggcggcaaattctccctaagag 184  Q
    ||||| || |||||||||||| ||||| | ||||||||||||||||||||||||| || |||||||||||||   ||||||||||||    
T  31307047 taaaccgggtatcctccgcgcgcaactgcggagactaatccctcgagcattgtgggacccaaatgggcggcaggctctccctaagag 31307133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 107 - 184
Target Start/End: Complemental strand, 9012421 - 9012344
Alignment:
Q  107 tatcctccgcgcacaactccagagactaatccctcgagcattgtggaactcaaatgggcggcaaattctccctaagag 184  Q
    |||||||||||| ||||| | ||||||||||||||||||||||||| || ||| ||||||||||  ||||||||||||    
T  9012421 tatcctccgcgcgcaactgcggagactaatccctcgagcattgtgggacccaagtgggcggcaagctctccctaagag 9012344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 107 - 184
Target Start/End: Complemental strand, 14854756 - 14854679
Alignment:
Q  107 tatcctccgcgcacaactccagagactaatccctcgagcattgtggaactcaaatgggcggcaaattctccctaagag 184  Q
    |||||||||||| ||||| ||||||||||||||||||| ||||| | || ||||||||||||||  ||||||||||||    
T  14854756 tatcctccgcgcgcaactgcagagactaatccctcgagaattgttggacccaaatgggcggcaagctctccctaagag 14854679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 107 - 184
Target Start/End: Complemental strand, 38766240 - 38766163
Alignment:
Q  107 tatcctccgcgcacaactccagagactaatccctcgagcattgtggaactcaaatgggcggcaaattctccctaagag 184  Q
    |||||||||||| ||||| | ||||||||||||||||||||||||  || ||||||||||||| | ||||||||||||    
T  38766240 tatcctccgcgcgcaactgcggagactaatccctcgagcattgtgagacccaaatgggcggcagactctccctaagag 38766163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 98 - 181
Target Start/End: Complemental strand, 35972503 - 35972420
Alignment:
Q  98 taaactggatatcctccgcgcacaactccagagactaatccctcgagcattgtggaactcaaatgggcggcaaattctccctaa 181  Q
    |||||| | |||||||||| | ||||| | |||||||||||||||| ||| |||| || ||||||||||||||| |||||||||    
T  35972503 taaactaggtatcctccgcacgcaactgcggagactaatccctcgaacatagtgggacccaaatgggcggcaaactctccctaa 35972420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 107 - 184
Target Start/End: Complemental strand, 33529408 - 33529331
Alignment:
Q  107 tatcctccgcgcacaactccagagactaatccctcgagcattgtggaactcaaatgggcggcaaattctccctaagag 184  Q
    ||||||||| || ||||| | |||||||||||||| || ||||||| || ||||||||||||||  ||||||||||||    
T  33529408 tatcctccgtgcgcaactgcggagactaatccctccagtattgtgggacccaaatgggcggcaagctctccctaagag 33529331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 112 - 184
Target Start/End: Original strand, 13948587 - 13948659
Alignment:
Q  112 tccgcgcacaactccagagactaatccctcgagcattgtggaactcaaatgggcggcaaattctccctaagag 184  Q
    ||||||| ||||| ||||||||||||||||||||||||||  | |||||||| ||| | | ||||||||||||    
T  13948587 tccgcgcgcaactgcagagactaatccctcgagcattgtgagattcaaatggacggtagactctccctaagag 13948659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 96 - 168
Target Start/End: Original strand, 35334077 - 35334149
Alignment:
Q  96 tataaactggatatcctccgcgcacaactccagagactaatccctcgagcattgtggaactcaaatgggcggc 168  Q
    ||||||| ||||||||| | ||| ||||| | ||||||||||||||||| ||||||| || ||||||||||||    
T  35334077 tataaaccggatatccttcacgcgcaactgcggagactaatccctcgagtattgtgggacccaaatgggcggc 35334149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 106 - 184
Target Start/End: Complemental strand, 17135248 - 17135170
Alignment:
Q  106 atatcctccgcgcacaactccagagactaatccctcgagcattgtggaactcaaatgggcggcaaattctccctaagag 184  Q
    |||||||||| || |||||   |||||||||||||||||  || ||| ||||||||| |||||||| ||||||||||||    
T  17135248 atatcctccgtgcgcaacttttgagactaatccctcgagtcttctgggactcaaatgcgcggcaaactctccctaagag 17135170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 107 - 181
Target Start/End: Original strand, 51626296 - 51626370
Alignment:
Q  107 tatcctccgcgcacaactccagagactaatccctcgagcattgtggaactcaaatgggcggcaaattctccctaa 181  Q
    |||||||||||| ||||| | |||||||||| |||||||| ||||| || ||||||| ||||| | |||||||||    
T  51626296 tatcctccgcgcgcaactgcggagactaatctctcgagcactgtgggacccaaatggacggcagactctccctaa 51626370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 107 - 184
Target Start/End: Complemental strand, 46016300 - 46016223
Alignment:
Q  107 tatcctccgcgcacaactccagagactaatccctcgagcattgtggaactcaaatgggcggcaaattctccctaagag 184  Q
    |||||||| ||| ||||| | ||||||||| | ||||||||||||| || |||||||||||||   ||||||||||||    
T  46016300 tatcctccacgcgcaactacggagactaattcttcgagcattgtgggacccaaatgggcggcaggctctccctaagag 46016223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 127 - 184
Target Start/End: Original strand, 38844178 - 38844235
Alignment:
Q  127 agagactaatccctcgagcattgtggaactcaaatgggcggcaaattctccctaagag 184  Q
    ||||||||||| ||||||||||||||   |||||||||||||| | ||| ||||||||    
T  38844178 agagactaatctctcgagcattgtgggggtcaaatgggcggcagactcttcctaagag 38844235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 128 - 172
Target Start/End: Original strand, 25768699 - 25768743
Alignment:
Q  128 gagactaatccctcgagcattgtggaactcaaatgggcggcaaat 172  Q
    ||||||||||| || |||||||||| || ||||||||||||||||    
T  25768699 gagactaatccttcaagcattgtggcacccaaatgggcggcaaat 25768743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 96 - 184
Target Start/End: Complemental strand, 45994684 - 45994596
Alignment:
Q  96 tataaactggatatcctccgcgcacaactccagagactaatccctcgagcattgtggaactcaaatgggcggcaaattctccctaagag 184  Q
    |||||||||| ||||||  |||  ||||| | |||||||||| |||||||||||||  || |||||||||| ||   ||||||||||||    
T  45994684 tataaactgggtatccttggcgtgcaactgcggagactaatctctcgagcattgtgagacccaaatgggcgtcaggctctccctaagag 45994596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 46; Significance: 5e-17; HSPs: 15)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 107 - 184
Target Start/End: Original strand, 4125014 - 4125091
Alignment:
Q  107 tatcctccgcgcacaactccagagactaatccctcgagcattgtggaactcaaatgggcggcaaattctccctaagag 184  Q
    |||||||||||| ||||| | ||||||||||||||||||||||||| || |||||||||||||   ||||||||||||    
T  4125014 tatcctccgcgcgcaactgcggagactaatccctcgagcattgtgggacccaaatgggcggcaggctctccctaagag 4125091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 107 - 184
Target Start/End: Original strand, 7839243 - 7839320
Alignment:
Q  107 tatcctccgcgcacaactccagagactaatccctcgagcattgtggaactcaaatgggcggcaaattctccctaagag 184  Q
    |||||||||||| ||||| | ||||||||||||||||||||||||| || |||||||||||||   ||||||||||||    
T  7839243 tatcctccgcgcgcaactgcggagactaatccctcgagcattgtgggacccaaatgggcggcatgctctccctaagag 7839320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 98 - 184
Target Start/End: Original strand, 13468726 - 13468812
Alignment:
Q  98 taaactggatatcctccgcgcacaactccagagactaatccctcgagcattgtggaactcaaatgggcggcaaattctccctaagag 184  Q
    ||||| || ||||||||| || ||||| | ||||||||||| ||||||||||||| |||||||||||||||| | |||| |||||||    
T  13468726 taaaccgggtatcctccgtgcgcaactgcggagactaatccttcgagcattgtgggactcaaatgggcggcagactctctctaagag 13468812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 98 - 184
Target Start/End: Complemental strand, 2744093 - 2744007
Alignment:
Q  98 taaactggatatcctccgcgcacaactccagagactaatccctcgagcattgtggaactcaaatgggcggcaaattctccctaagag 184  Q
    ||||| || |||||||||||| ||||| | ||||||||||||||||||||||||| || ||||||| || ||   ||||||||||||    
T  2744093 taaaccgggtatcctccgcgcgcaactgcggagactaatccctcgagcattgtgggacccaaatggacgacatgctctccctaagag 2744007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 106 - 184
Target Start/End: Original strand, 30055990 - 30056068
Alignment:
Q  106 atatcctccgcgcacaactccagagactaatccctcgagcattgtggaactcaaatgggcggcaaattctccctaagag 184  Q
    |||||| |||| | |||||  ||||||||||||||||||||||||||||| ||||||| |||||   ||||||||||||    
T  30055990 atatcccccgcacgcaactaaagagactaatccctcgagcattgtggaacccaaatggacggcaggctctccctaagag 30056068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 120 - 184
Target Start/End: Original strand, 36994503 - 36994567
Alignment:
Q  120 caactccagagactaatccctcgagcattgtggaactcaaatgggcggcaaattctccctaagag 184  Q
    ||||| |||||||||||||||||||| |||||| || ||||||||| ||||| ||||| ||||||    
T  36994503 caactgcagagactaatccctcgagccttgtgggacccaaatgggcagcaaactctccttaagag 36994567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 109 - 184
Target Start/End: Original strand, 12958077 - 12958152
Alignment:
Q  109 tcctccgcgcacaactccagagactaatccctcgagcattgtggaactcaaatgggcggcaaattctccctaagag 184  Q
    |||||||||| | ||| | ||||||||||||||||||||||||| || |||||||||| ||   ||||||||||||    
T  12958077 tcctccgcgcgctactgcggagactaatccctcgagcattgtgggacccaaatgggcgacaggctctccctaagag 12958152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 111 - 184
Target Start/End: Original strand, 19715719 - 19715793
Alignment:
Q  111 ctccgcgcacaactccagagactaatccc-tcgagcattgtggaactcaaatgggcggcaaattctccctaagag 184  Q
    |||||||| ||||| | |||||||||||| ||||||||||||| || ||||||||||||||  ||||||| ||||    
T  19715719 ctccgcgcgcaactgcggagactaatcccctcgagcattgtgggacccaaatgggcggcaagctctccctgagag 19715793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 129 - 181
Target Start/End: Complemental strand, 21032425 - 21032373
Alignment:
Q  129 agactaatccctcgagcattgtggaactcaaatgggcggcaaattctccctaa 181  Q
    |||||||||||||||||||||| | ||||||||  |||||||| |||||||||    
T  21032425 agactaatccctcgagcattgtagtactcaaataagcggcaaactctccctaa 21032373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 112 - 184
Target Start/End: Complemental strand, 30936150 - 30936078
Alignment:
Q  112 tccgcgcacaactccagagactaatccctcgagcattgtggaactcaaatgggcggcaaattctccctaagag 184  Q
    ||||||| ||||| | |||||||||||||||| |||||| | || |||||||||||||   ||||||||||||    
T  30936150 tccgcgcgcaactgcggagactaatccctcgaacattgtcggacccaaatgggcggcaggctctccctaagag 30936078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 107 - 158
Target Start/End: Complemental strand, 39086903 - 39086852
Alignment:
Q  107 tatcctccgcgcacaactccagagactaatccctcgagcattgtggaactca 158  Q
    |||||||||||  ||||| | ||||||||||||||||||||||||| |||||    
T  39086903 tatcctccgcgtgcaactgcggagactaatccctcgagcattgtgggactca 39086852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 131 - 165
Target Start/End: Complemental strand, 8521825 - 8521791
Alignment:
Q  131 actaatccctcgagcattgtggaactcaaatgggc 165  Q
    |||||||||||||||||||||| ||||||||||||    
T  8521825 actaatccctcgagcattgtgggactcaaatgggc 8521791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 126 - 184
Target Start/End: Complemental strand, 15683061 - 15683003
Alignment:
Q  126 cagagactaatccctcgagcattgtggaactcaaatgggcggcaaattctccctaagag 184  Q
    |||||| |||||||||||||||||||| ||  ||||||||||||   ||||||||||||    
T  15683061 cagagattaatccctcgagcattgtgggacctaaatgggcggcaggctctccctaagag 15683003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 128 - 170
Target Start/End: Complemental strand, 24988629 - 24988587
Alignment:
Q  128 gagactaatccctcgagcattgtggaactcaaatgggcggcaa 170  Q
    ||||||||||||||||| ||||||| ||||||||| |||||||    
T  24988629 gagactaatccctcgagtattgtgggactcaaatgagcggcaa 24988587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 98 - 152
Target Start/End: Complemental strand, 40320256 - 40320202
Alignment:
Q  98 taaactggatatcctccgcgcacaactccagagactaatccctcgagcattgtgg 152  Q
    |||| ||| ||||||||||| |||||| |||||||||||| ||||||||| ||||    
T  40320256 taaattgggtatcctccgcgtacaactacagagactaatctctcgagcatcgtgg 40320202  T

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Target: chr7 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 14)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 98 - 184
Target Start/End: Complemental strand, 29059965 - 29059879
Alignment:
Q  98 taaactggatatcctccgcgcacaactccagagactaatccctcgagcattgtggaactcaaatgggcggcaaattctccctaagag 184  Q
    ||||| || |||||||||||| ||||| | |||||||||||||| |||||||||| || |||||||||||||   ||||||||||||    
T  29059965 taaaccgggtatcctccgcgcgcaactgcggagactaatccctcaagcattgtgggacccaaatgggcggcaggctctccctaagag 29059879  T

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Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 98 - 184
Target Start/End: Complemental strand, 31492263 - 31492177
Alignment:
Q  98 taaactggatatcctccgcgcacaactccagagactaatccctcgagcattgtggaactcaaatgggcggcaaattctccctaagag 184  Q
    ||||| || |||||||||||| ||||| | ||||||||||||||||||||||||| ||  ||||||||||||   ||||||||||||    
T  31492263 taaaccgggtatcctccgcgcgcaactgcggagactaatccctcgagcattgtgggacctaaatgggcggcaggctctccctaagag 31492177  T

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Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 98 - 170
Target Start/End: Original strand, 11486725 - 11486797
Alignment:
Q  98 taaactggatatcctccgcgcacaactccagagactaatccctcgagcattgtggaactcaaatgggcggcaa 170  Q
    ||||| || |||||||||||| |||||  ||||||||||| || |||||||||||||| ||||||||||||||    
T  11486725 taaaccgggtatcctccgcgcgcaactgtagagactaatctcttgagcattgtggaacccaaatgggcggcaa 11486797  T

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Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 96 - 183
Target Start/End: Complemental strand, 35708008 - 35707921
Alignment:
Q  96 tataaactggatatcctccgcgcacaactccagagactaatccctcgagcattgt-ggaactcaaatgggcggcaaattctccctaaga 183  Q
    ||||||| || |||||||| ||| ||||| ||||||||||||||||||||||||| ||| || ||||||| ||||| ||||||||||||    
T  35708008 tataaaccgggtatcctccacgcgcaactgcagagactaatccctcgagcattgtaggatct-aaatgggaggcaagttctccctaaga 35707921  T

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Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 98 - 152
Target Start/End: Complemental strand, 28665250 - 28665196
Alignment:
Q  98 taaactggatatcctccgcgcacaactccagagactaatccctcgagcattgtgg 152  Q
    |||||||| |||||||||||  ||||| | |||||||||||||||||||||||||    
T  28665250 taaactgggtatcctccgcgtgcaactgcggagactaatccctcgagcattgtgg 28665196  T

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Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 120 - 182
Target Start/End: Original strand, 29428795 - 29428857
Alignment:
Q  120 caactccagagactaatccctcgagcattgtggaactcaaatgggcggcaaattctccctaag 182  Q
    ||||| |||||||||||||||||| |||||||| |  ||||||| ||||||| ||||||||||    
T  29428795 caactgcagagactaatccctcgaacattgtgggatccaaatggtcggcaaactctccctaag 29428857  T

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Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 107 - 164
Target Start/End: Original strand, 21747030 - 21747087
Alignment:
Q  107 tatcctccgcgcacaactccagagactaatccctcgagcattgtggaactcaaatggg 164  Q
    |||||||||||||||||| |  |||||||||||||||| ||||||| || ||||||||    
T  21747030 tatcctccgcgcacaactgcgaagactaatccctcgaggattgtgggacccaaatggg 21747087  T

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Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 107 - 184
Target Start/End: Original strand, 37339723 - 37339800
Alignment:
Q  107 tatcctccgcgcacaactccagagactaatccctcgagcattgtggaactcaaatgggcggcaaattctccctaagag 184  Q
    ||||||||| || ||||| | ||||||||||||||||||||| ||| || ||||| ||||||| | |||| |||||||    
T  37339723 tatcctccgtgcgcaactgcggagactaatccctcgagcattatgggacccaaataggcggcagactctcactaagag 37339800  T

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Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 126 - 181
Target Start/End: Original strand, 23933660 - 23933715
Alignment:
Q  126 cagagactaatccctcgagcattgtggaactcaaatgggcggcaaattctccctaa 181  Q
    |||||||||||||||| || ||||| ||||  |||||||||||||| |||||||||    
T  23933660 cagagactaatccctcaagtattgtcgaacctaaatgggcggcaaactctccctaa 23933715  T

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Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 107 - 150
Target Start/End: Original strand, 36821070 - 36821113
Alignment:
Q  107 tatcctccgcgcacaactccagagactaatccctcgagcattgt 150  Q
    ||||||| |||| ||||| |||||||||||||||||||||||||    
T  36821070 tatcctctgcgcgcaactgcagagactaatccctcgagcattgt 36821113  T

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Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 107 - 184
Target Start/End: Original strand, 19477242 - 19477316
Alignment:
Q  107 tatcctccgcgcacaactccagagactaatccctcgagcattgtggaactcaaatgggcggcaaattctccctaagag 184  Q
    |||||||||||||  ||| | |||||||||||||| |||||||||| || ||||||| ||||||  ||||||||||||    
T  19477242 tatcctccgcgca--actgcggagactaatccctc-agcattgtgggacccaaatggccggcaagctctccctaagag 19477316  T

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Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 107 - 181
Target Start/End: Original strand, 42741799 - 42741872
Alignment:
Q  107 tatcctccgcgcacaactccagagactaatccctcgagcattgtggaactcaaatgggcggcaaattctccctaa 181  Q
    |||||||||||| ||||| |||||| |||||||||||| ||| ||| || |||||||| ||||  ||||||||||    
T  42741799 tatcctccgcgcgcaactgcagagattaatccctcgagtattatgg-acccaaatgggtggcaggttctccctaa 42741872  T

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Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 111 - 184
Target Start/End: Complemental strand, 24172356 - 24172283
Alignment:
Q  111 ctccgcgcacaactccagagactaatccctcgagcattgtggaactcaaatgggcggcaaattctccctaagag 184  Q
    |||||||| ||||| || |||||||||| ||||||||||||| |  ||| ||||||||||  |||| |||||||    
T  24172356 ctccgcgcgcaactgcatagactaatccttcgagcattgtgggatccaagtgggcggcaagctctcactaagag 24172283  T

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Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 128 - 184
Target Start/End: Original strand, 8839292 - 8839348
Alignment:
Q  128 gagactaatccctcgagcattgtggaactcaaatgggcggcaaattctccctaagag 184  Q
    ||||||||||||||||| ||||||| |   |||| ||||||| ||||||||||||||    
T  8839292 gagactaatccctcgagtattgtgggatctaaataggcggcagattctccctaagag 8839348  T

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Target: scaffold0182 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 98 - 184
Target Start/End: Complemental strand, 26491 - 26405
Alignment:
Q  98 taaactggatatcctccgcgcacaactccagagactaatccctcgagcattgtggaactcaaatgggcggcaaattctccctaagag 184  Q
    ||||| || |||||||||||| ||||| | |||||||||| ||||| |||||||| || |||||||||||||   ||||||||||||    
T  26491 taaaccgggtatcctccgcgcgcaactgcggagactaatctctcgaacattgtgggacccaaatgggcggcaggctctccctaagag 26405  T

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Target: scaffold0009 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 107 - 184
Target Start/End: Original strand, 27215 - 27292
Alignment:
Q  107 tatcctccgcgcacaactccagagactaatccctcgagcattgtggaactcaaatgggcggcaaattctccctaagag 184  Q
    |||||||||||| ||||| |  ||||||||||||||||||| |||  |  ||||||||||||||  ||||||||||||    
T  27215 tatcctccgcgcgcaactgcgaagactaatccctcgagcatcgtgagatccaaatgggcggcaagctctccctaagag 27292  T

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