View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1125_low_47 (Length: 384)

Name: NF1125_low_47
Description: NF1125
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1125_low_47
NF1125_low_47
[»] chr6 (20 HSPs)
chr6 (140-384)||(6197453-6197697)
chr6 (140-384)||(1391610-1391854)
chr6 (140-384)||(2300714-2300957)
chr6 (140-384)||(28002651-28002895)
chr6 (159-384)||(29076584-29076810)
chr6 (159-384)||(29111557-29111784)
chr6 (159-384)||(31895682-31895907)
chr6 (157-384)||(14262425-14262652)
chr6 (158-384)||(7051831-7052057)
chr6 (171-384)||(34773395-34773608)
chr6 (157-384)||(34759042-34759270)
chr6 (157-341)||(7497105-7497288)
chr6 (157-384)||(30385061-30385276)
chr6 (159-294)||(31067569-31067694)
chr6 (223-379)||(656957-657101)
chr6 (141-213)||(2238668-2238741)
chr6 (159-279)||(4200431-4200541)
chr6 (140-192)||(657114-657165)
chr6 (250-382)||(3848200-3848330)
chr6 (165-203)||(11113733-11113771)
[»] chr4 (65 HSPs)
chr4 (140-384)||(25331117-25331361)
chr4 (140-384)||(22202001-22202245)
chr4 (140-384)||(41881056-41881303)
chr4 (154-374)||(1112889-1113109)
chr4 (140-384)||(30009653-30009897)
chr4 (140-379)||(34228559-34228798)
chr4 (142-384)||(1044795-1045035)
chr4 (140-384)||(12112931-12113176)
chr4 (140-384)||(55302829-55303077)
chr4 (141-384)||(39479332-39479577)
chr4 (140-384)||(32950811-32951056)
chr4 (140-384)||(7007360-7007605)
chr4 (140-384)||(37046425-37046672)
chr4 (140-341)||(42786713-42786913)
chr4 (140-384)||(24130957-24131192)
chr4 (140-374)||(46635624-46635852)
chr4 (194-384)||(28541684-28541874)
chr4 (142-327)||(41320853-41321038)
chr4 (140-340)||(3436623-3436823)
chr4 (141-384)||(31314719-31314948)
chr4 (159-384)||(5441390-5441615)
chr4 (159-384)||(27768042-27768267)
chr4 (159-384)||(54341130-54341355)
chr4 (193-340)||(25446080-25446227)
chr4 (140-382)||(53275827-53276069)
chr4 (157-384)||(54853461-54853688)
chr4 (140-384)||(40537136-40537365)
chr4 (185-384)||(19740929-19741128)
chr4 (159-382)||(37828397-37828620)
chr4 (157-380)||(51320911-51321134)
chr4 (157-384)||(37915813-37916040)
chr4 (159-384)||(9163062-9163279)
chr4 (147-296)||(27454061-27454210)
chr4 (194-299)||(7249795-7249900)
chr4 (157-384)||(32322077-32322304)
chr4 (157-384)||(23987200-23987417)
chr4 (144-380)||(39307234-39307469)
chr4 (159-299)||(48261198-48261338)
chr4 (208-384)||(23464941-23465117)
chr4 (221-384)||(25504696-25504859)
chr4 (159-384)||(30967304-30967519)
chr4 (173-384)||(44770862-44771074)
chr4 (140-258)||(8711978-8712094)
chr4 (157-293)||(56445348-56445474)
chr4 (157-258)||(24736447-24736548)
chr4 (141-384)||(36479221-36479451)
chr4 (157-384)||(12913210-12913427)
chr4 (171-380)||(41725115-41725321)
chr4 (157-384)||(49501512-49501731)
chr4 (157-384)||(49507577-49507796)
chr4 (208-384)||(28370910-28371086)
chr4 (228-384)||(29649731-29649887)
chr4 (241-384)||(49834890-49835033)
chr4 (140-239)||(11090435-11090532)
chr4 (157-341)||(28483928-28484101)
chr4 (173-279)||(20021424-20021531)
chr4 (157-299)||(5800049-5800181)
chr4 (174-384)||(50018237-50018437)
chr4 (157-384)||(32684001-32684207)
chr4 (170-299)||(41581795-41581923)
chr4 (316-384)||(37915771-37915839)
chr4 (157-214)||(49834826-49834883)
chr4 (140-174)||(25446224-25446258)
chr4 (141-190)||(49469411-49469459)
chr4 (315-384)||(40537338-40537407)
[»] chr2 (37 HSPs)
chr2 (140-384)||(31170602-31170846)
chr2 (140-384)||(16269679-16269923)
chr2 (140-384)||(20605224-20605468)
chr2 (140-384)||(24776343-24776586)
chr2 (140-384)||(14198555-14198799)
chr2 (140-384)||(12407368-12407612)
chr2 (140-384)||(43847634-43847878)
chr2 (140-384)||(305443-305687)
chr2 (141-384)||(5093025-5093269)
chr2 (140-384)||(22551741-22551985)
chr2 (140-380)||(35317054-35317294)
chr2 (140-384)||(44765763-44765998)
chr2 (140-384)||(1789430-1789676)
chr2 (140-379)||(9120119-9120358)
chr2 (140-384)||(32125238-32125486)
chr2 (157-384)||(28844543-28844770)
chr2 (157-384)||(10657394-10657621)
chr2 (157-380)||(33135615-33135837)
chr2 (157-379)||(25288152-25288374)
chr2 (157-384)||(28740288-28740505)
chr2 (159-374)||(18177265-18177480)
chr2 (159-384)||(26788772-26788996)
chr2 (230-384)||(7026592-7026746)
chr2 (140-380)||(26601191-26601418)
chr2 (157-380)||(10125295-10125510)
chr2 (159-282)||(43078653-43078776)
chr2 (157-384)||(13833427-13833644)
chr2 (159-374)||(3463669-3463875)
chr2 (257-384)||(215320-215447)
chr2 (241-380)||(3574839-3574978)
chr2 (157-293)||(379016-379142)
chr2 (315-384)||(20605140-20605209)
chr2 (157-228)||(6224562-6224633)
chr2 (241-384)||(6224626-6224770)
chr2 (157-228)||(215233-215303)
chr2 (159-206)||(7027053-7027100)
chr2 (315-384)||(24776301-24776370)
[»] chr8 (39 HSPs)
chr8 (140-384)||(2704794-2705038)
chr8 (140-384)||(24501788-24502032)
chr8 (143-384)||(42938095-42938336)
chr8 (140-380)||(26374405-26374645)
chr8 (140-384)||(42937340-42937582)
chr8 (140-380)||(7506874-7507114)
chr8 (140-384)||(42735252-42735496)
chr8 (140-384)||(5576595-5576840)
chr8 (147-384)||(23115152-23115387)
chr8 (144-374)||(10392217-10392446)
chr8 (140-380)||(41479088-41479318)
chr8 (140-384)||(43959645-43959878)
chr8 (159-384)||(14782129-14782354)
chr8 (159-384)||(44725804-44726029)
chr8 (157-384)||(9288449-9288676)
chr8 (159-384)||(19717875-19718100)
chr8 (157-384)||(39467460-39467687)
chr8 (159-384)||(18958721-18958946)
chr8 (157-384)||(43166682-43166909)
chr8 (159-384)||(10295374-10295600)
chr8 (157-380)||(26856057-26856281)
chr8 (157-294)||(4403184-4403321)
chr8 (157-382)||(32497514-32497729)
chr8 (157-384)||(18305963-18306180)
chr8 (157-384)||(7466322-7466539)
chr8 (143-292)||(4949995-4950143)
chr8 (241-384)||(32711358-32711501)
chr8 (157-380)||(39189808-39190028)
chr8 (157-382)||(16362185-16362400)
chr8 (159-384)||(42305789-42306004)
chr8 (241-377)||(31623689-31623825)
chr8 (241-384)||(4031334-4031477)
chr8 (157-299)||(37857191-37857323)
chr8 (140-291)||(13478226-13478376)
chr8 (155-228)||(9770430-9770503)
chr8 (185-293)||(8410416-8410526)
chr8 (157-214)||(31623832-31623889)
chr8 (176-217)||(32711305-32711346)
chr8 (250-294)||(41070022-41070066)
[»] chr3 (66 HSPs)
chr3 (140-380)||(20498199-20498439)
chr3 (140-384)||(996062-996306)
chr3 (140-384)||(10139122-10139366)
chr3 (140-384)||(19253813-19254057)
chr3 (140-341)||(3206181-3206382)
chr3 (143-384)||(3999624-3999865)
chr3 (140-384)||(37820453-37820697)
chr3 (140-384)||(6589550-6589795)
chr3 (140-384)||(29448833-29449078)
chr3 (140-384)||(25418352-25418595)
chr3 (140-384)||(35337721-35337963)
chr3 (162-384)||(33807796-33808019)
chr3 (140-382)||(40246832-40247073)
chr3 (140-372)||(53929104-53929336)
chr3 (144-384)||(54625578-54625818)
chr3 (140-384)||(44762011-44762257)
chr3 (170-375)||(33996547-33996752)
chr3 (157-384)||(17946274-17946501)
chr3 (140-382)||(52114516-52114759)
chr3 (140-377)||(6035031-6035266)
chr3 (157-384)||(44906506-44906733)
chr3 (159-384)||(36674125-36674350)
chr3 (157-384)||(40897130-40897357)
chr3 (159-384)||(34484025-34484250)
chr3 (159-384)||(11431512-11431737)
chr3 (179-384)||(51699495-51699699)
chr3 (157-384)||(54628829-54629057)
chr3 (172-384)||(29029992-29030203)
chr3 (157-380)||(52810368-52810591)
chr3 (140-252)||(6131210-6131321)
chr3 (157-341)||(18749641-18749825)
chr3 (219-384)||(1440007-1440173)
chr3 (157-371)||(26107260-26107474)
chr3 (159-380)||(32580167-32580387)
chr3 (157-384)||(51737719-51737947)
chr3 (157-372)||(48379155-48379370)
chr3 (159-293)||(5825139-5825273)
chr3 (157-384)||(31646279-31646504)
chr3 (157-384)||(52617964-52618185)
chr3 (159-384)||(50903235-50903463)
chr3 (157-384)||(10728644-10728861)
chr3 (199-384)||(22057747-22057933)
chr3 (157-380)||(37454851-37455064)
chr3 (140-264)||(1439869-1439994)
chr3 (159-335)||(27899379-27899545)
chr3 (175-384)||(20832978-20833187)
chr3 (140-298)||(52079999-52080142)
chr3 (157-380)||(39038030-39038243)
chr3 (157-384)||(50762053-50762270)
chr3 (230-384)||(10660521-10660675)
chr3 (157-384)||(44276375-44276588)
chr3 (157-299)||(39842487-39842619)
chr3 (241-384)||(23753463-23753606)
chr3 (196-290)||(55235264-55235359)
chr3 (162-217)||(33807678-33807733)
chr3 (182-384)||(6975735-6975924)
chr3 (157-228)||(45862983-45863054)
chr3 (236-341)||(539476-539581)
chr3 (159-239)||(15492862-15492942)
chr3 (270-384)||(12103615-12103729)
chr3 (307-384)||(18749556-18749633)
chr3 (310-380)||(6131317-6131387)
chr3 (172-227)||(12103733-12103789)
chr3 (159-214)||(23753402-23753456)
chr3 (349-384)||(27240428-27240463)
chr3 (243-338)||(23535890-23535984)
[»] scaffold0400 (1 HSPs)
scaffold0400 (140-384)||(15009-15253)
[»] scaffold0365 (1 HSPs)
scaffold0365 (140-384)||(15652-15896)
[»] chr7 (66 HSPs)
chr7 (140-380)||(973176-973416)
chr7 (140-384)||(18914710-18914954)
chr7 (140-384)||(43581065-43581309)
chr7 (143-384)||(7719238-7719479)
chr7 (140-384)||(30440784-30441028)
chr7 (140-384)||(40996624-40996868)
chr7 (140-384)||(34695261-34695505)
chr7 (140-384)||(47879156-47879400)
chr7 (140-384)||(47914254-47914498)
chr7 (143-384)||(44343374-44343615)
chr7 (140-384)||(34009000-34009245)
chr7 (143-384)||(12893396-12893639)
chr7 (147-341)||(7718345-7718538)
chr7 (140-341)||(39219352-39219552)
chr7 (140-384)||(20275238-20275482)
chr7 (143-341)||(32142895-32143095)
chr7 (159-384)||(23101279-23101504)
chr7 (159-384)||(28342328-28342553)
chr7 (159-384)||(39784080-39784305)
chr7 (157-384)||(3022907-3023134)
chr7 (157-380)||(9882229-9882451)
chr7 (157-384)||(28034797-28035024)
chr7 (140-295)||(7113529-7113684)
chr7 (141-384)||(10068447-10068689)
chr7 (171-384)||(29614770-29614983)
chr7 (157-380)||(18838374-18838597)
chr7 (157-381)||(33382621-33382845)
chr7 (160-384)||(12740354-12740577)
chr7 (140-384)||(12963682-12963919)
chr7 (157-384)||(7993123-7993350)
chr7 (157-372)||(8675326-8675541)
chr7 (194-295)||(43679491-43679592)
chr7 (157-293)||(43187349-43187485)
chr7 (157-382)||(46405433-46405648)
chr7 (158-374)||(9179871-9180077)
chr7 (157-383)||(40460709-40460925)
chr7 (159-384)||(509637-509852)
chr7 (157-374)||(3797059-3797266)
chr7 (160-384)||(19251520-19251734)
chr7 (232-384)||(31638863-31639015)
chr7 (157-384)||(37327908-37328125)
chr7 (157-380)||(44121902-44122115)
chr7 (183-384)||(727500-727692)
chr7 (157-384)||(44256758-44256985)
chr7 (199-384)||(32883763-32883948)
chr7 (142-294)||(1470213-1470362)
chr7 (159-290)||(19810874-19810995)
chr7 (157-279)||(37972859-37972981)
chr7 (195-294)||(25805763-25805862)
chr7 (157-264)||(41827405-41827512)
chr7 (208-382)||(10676463-10676637)
chr7 (157-380)||(29585500-29585712)
chr7 (230-382)||(39028080-39028232)
chr7 (174-376)||(33892269-33892461)
chr7 (241-384)||(17001099-17001242)
chr7 (174-380)||(44623295-44623491)
chr7 (141-259)||(10617024-10617141)
chr7 (140-191)||(31639031-31639082)
chr7 (235-294)||(447854-447913)
chr7 (241-299)||(47066770-47066828)
chr7 (269-384)||(29893062-29893177)
chr7 (318-384)||(48117746-48117812)
chr7 (171-206)||(17001049-17001084)
chr7 (311-340)||(8078428-8078457)
chr7 (171-228)||(47066821-47066878)
chr7 (315-384)||(43187535-43187604)
[»] chr5 (27 HSPs)
chr5 (143-384)||(21147054-21147294)
chr5 (140-384)||(7016714-7016958)
chr5 (140-384)||(33656017-33656262)
chr5 (140-384)||(5272894-5273138)
chr5 (140-384)||(27458925-27459168)
chr5 (140-384)||(32157869-32158117)
chr5 (141-380)||(139264-139504)
chr5 (157-384)||(1152095-1152322)
chr5 (140-341)||(849177-849370)
chr5 (159-382)||(14000099-14000322)
chr5 (159-384)||(4550251-4550476)
chr5 (157-380)||(13925922-13926145)
chr5 (140-384)||(6460779-6461008)
chr5 (157-371)||(7947565-7947779)
chr5 (143-336)||(9689693-9689884)
chr5 (159-341)||(39852375-39852557)
chr5 (157-382)||(4240454-4240669)
chr5 (158-384)||(22746284-22746502)
chr5 (157-384)||(1461140-1461357)
chr5 (157-384)||(5949096-5949312)
chr5 (205-376)||(14465267-14465438)
chr5 (159-384)||(40013706-40013921)
chr5 (143-374)||(9220696-9220916)
chr5 (241-384)||(37013901-37014044)
chr5 (157-214)||(37014051-37014108)
chr5 (307-341)||(16894044-16894078)
chr5 (315-384)||(5273111-5273180)
[»] chr1 (50 HSPs)
chr1 (140-384)||(19451784-19452028)
chr1 (140-380)||(21222131-21222371)
chr1 (140-382)||(50192526-50192769)
chr1 (140-384)||(45759985-45760230)
chr1 (140-384)||(49198245-49198488)
chr1 (140-384)||(28824349-28824592)
chr1 (140-380)||(47654327-47654568)
chr1 (140-384)||(47780691-47780935)
chr1 (140-384)||(35679102-35679348)
chr1 (141-379)||(6304227-6304468)
chr1 (155-381)||(35279655-35279881)
chr1 (151-384)||(45535924-45536163)
chr1 (159-384)||(49418064-49418289)
chr1 (140-384)||(29556084-29556328)
chr1 (141-294)||(31572174-31572327)
chr1 (154-384)||(37014630-37014860)
chr1 (159-384)||(25612137-25612362)
chr1 (157-382)||(48177455-48177680)
chr1 (159-384)||(51701560-51701785)
chr1 (159-382)||(29396383-29396606)
chr1 (159-380)||(6312558-6312779)
chr1 (141-382)||(32588936-32589171)
chr1 (159-384)||(15835048-15835273)
chr1 (172-384)||(46328022-46328234)
chr1 (199-384)||(730128-730314)
chr1 (141-380)||(9577411-9577648)
chr1 (159-380)||(9322495-9322716)
chr1 (159-384)||(28387388-28387613)
chr1 (140-374)||(33025502-33025726)
chr1 (193-384)||(48524299-48524490)
chr1 (157-384)||(38536092-38536309)
chr1 (157-384)||(38558310-38558527)
chr1 (175-384)||(5495117-5495316)
chr1 (157-384)||(29219268-29219483)
chr1 (241-384)||(18798471-18798614)
chr1 (250-384)||(49230866-49231000)
chr1 (157-294)||(48668778-48668905)
chr1 (277-380)||(22183354-22183457)
chr1 (141-201)||(48524805-48524865)
chr1 (232-291)||(955823-955882)
chr1 (307-384)||(953799-953876)
chr1 (241-291)||(31622536-31622586)
chr1 (143-299)||(51085860-51086014)
chr1 (157-382)||(45272569-45272782)
chr1 (307-380)||(8141271-8141344)
chr1 (172-267)||(38320003-38320098)
chr1 (140-191)||(730307-730357)
chr1 (159-214)||(18798621-18798676)
chr1 (241-341)||(47784410-47784509)
chr1 (349-384)||(47784409-47784444)
[»] scaffold0151 (1 HSPs)
scaffold0151 (140-341)||(38581-38781)
[»] scaffold0113 (1 HSPs)
scaffold0113 (140-384)||(38872-39115)
[»] scaffold0037 (1 HSPs)
scaffold0037 (140-384)||(100198-100444)
[»] scaffold0004 (1 HSPs)
scaffold0004 (142-380)||(102084-102324)
[»] scaffold0276 (1 HSPs)
scaffold0276 (159-384)||(534-759)
[»] scaffold0543 (1 HSPs)
scaffold0543 (159-384)||(10547-10772)
[»] scaffold0110 (1 HSPs)
scaffold0110 (157-380)||(39610-39833)
[»] scaffold1504 (1 HSPs)
scaffold1504 (159-384)||(850-1075)
[»] scaffold0042 (1 HSPs)
scaffold0042 (157-294)||(58069-58206)
[»] scaffold0306 (1 HSPs)
scaffold0306 (157-384)||(13869-14086)
[»] scaffold0152 (2 HSPs)
scaffold0152 (157-384)||(21241-21458)
scaffold0152 (157-205)||(28508-28556)
[»] scaffold0054 (1 HSPs)
scaffold0054 (162-341)||(36905-37084)
[»] scaffold0922 (1 HSPs)
scaffold0922 (234-384)||(4187-4337)
[»] scaffold0347 (1 HSPs)
scaffold0347 (157-239)||(14892-14974)
[»] scaffold0839 (1 HSPs)
scaffold0839 (157-267)||(3685-3795)
[»] scaffold0007 (1 HSPs)
scaffold0007 (207-291)||(199905-199989)
[»] scaffold0010 (2 HSPs)
scaffold0010 (349-384)||(233724-233759)
scaffold0010 (349-384)||(234572-234607)


Alignment Details
Target: chr6 (Bit Score: 175; Significance: 4e-94; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 175; E-Value: 4e-94
Query Start/End: Original strand, 140 - 384
Target Start/End: Original strand, 6197453 - 6197697
Alignment:
Q  140 tagtaaaatcttaaaagagaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatcca 239  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  6197453 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 6197552  T
Q  240 tcaaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 339  Q
    ||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||    
T  6197553 tcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaag 6197652  T
Q  340 acnnnnnnnaaatgacaaagactcttgattgaataccacaagact 384  Q
    ||       |||||||||||| ||||||||||||| |||||||||    
T  6197653 actttttttaaatgacaaagaatcttgattgaataacacaagact 6197697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 151; E-Value: 8e-80
Query Start/End: Original strand, 140 - 384
Target Start/End: Complemental strand, 1391854 - 1391610
Alignment:
Q  140 tagtaaaatcttaaaagagaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatcca 239  Q
    ||||||||||||||||   ||||||||||||||| ||||||||||||||||||||||||||||| ||| ||||||||| |||||||||||||||||||||    
T  1391854 tagtaaaatcttaaaaagaaaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatcca 1391755  T
Q  240 tcaaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 339  Q
    ||||||||||||||||||||||||| ||  ||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||    
T  1391754 tcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaag 1391655  T
Q  340 acnnnnnnnaaatgacaaagactcttgattgaataccacaagact 384  Q
    ||       ||||||||| || ||||||||||||| |||||||||    
T  1391654 actttatttaaatgacaatgaatcttgattgaataacacaagact 1391610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 140 - 384
Target Start/End: Original strand, 2300714 - 2300957
Alignment:
Q  140 tagtaaaatcttaaaagagaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatcca 239  Q
    ||||||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  2300714 tagtaaaattttaaaagaaaaaaa-aatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 2300812  T
Q  240 tcaaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 339  Q
    ||||||||| ||||||||||||||| || ||||||||||||||||| ||||||| |||||       ||||||| |||||||||||||||||||||||||    
T  2300813 tcaaaatcttatttattaaacaatccttcgaaatttgaatgattttcaataccagtagactttttttaagtgatcaagagtcttgattgaataccacaag 2300912  T
Q  340 acnnnnnnnaaatgacaaagactcttgattgaataccacaagact 384  Q
    ||       |||||||||||| ||||||||||||| |||||||||    
T  2300913 actttttttaaatgacaaagaatcttgattgaataacacaagact 2300957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 140 - 384
Target Start/End: Complemental strand, 28002895 - 28002651
Alignment:
Q  140 tagtaaaatcttaaaagagaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatcca 239  Q
    |||||||||||||||||| |||||||||||||||||   ||||||||||||||||||||||||| ||||||||||||| ||||||||  |||||||||||    
T  28002895 tagtaaaatcttaaaagaaaaaaacaatcctaagaagcttcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatttcacaaaatcca 28002796  T
Q  240 tcaaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 339  Q
    ||||||||||||||||||||||||| ||  ||||||||||||||||||||| ||||||||       ||||||||||||||||||||||||||||| |||    
T  28002795 tcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaatatcactagactttttttaagtgattaagagtcttgattgaataccagaag 28002696  T
Q  340 acnnnnnnnaaatgacaaagactcttgattgaataccacaagact 384  Q
    ||       |||||||||| | |||||||||||||  ||||||||    
T  28002695 actttttttaaatgacaaaaaatcttgattgaataagacaagact 28002651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 159 - 384
Target Start/End: Complemental strand, 29076810 - 29076584
Alignment:
Q  159 aaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttattaa 258  Q
    |||||||||||||| |||||||||||||| |||||||| |||||| ||||||||||||| |||||||||| | |||||||||||||||||||||||||||    
T  29076810 aaaaacaatcctaaaaaatctcatgtttttatgaaagattttttcatgctaaaatttcactagaaaatcctataaaatccatcaaaatctgatttattaa 29076711  T
Q  259 acaatcatttgaaatttgaatgattttgaataccactagac-nnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaa 357  Q
    |||||| || ||||||||||||||||||||||| |||||||        |||||||||||| ||| ||||||||||||||||||       |||||||||    
T  29076710 acaatccttcgaaatttgaatgattttgaatactactagacttttttttaagtgattaagaatctagattgaataccacaagactttttttaaatgacaa 29076611  T
Q  358 agactcttgattgaataccacaagact 384  Q
    ||| ||||||||||||| |||||||||    
T  29076610 agaatcttgattgaataacacaagact 29076584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 159 - 384
Target Start/End: Complemental strand, 29111784 - 29111557
Alignment:
Q  159 aaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttattaa 258  Q
    |||||||||||||| |||||||||||||| |||||||| |||||| ||||||||||||| |||||||||| | |||||||||||||||||||||||||||    
T  29111784 aaaaacaatcctaaaaaatctcatgtttttatgaaagattttttcatgctaaaatttcactagaaaatcctataaaatccatcaaaatctgatttattaa 29111685  T
Q  259 acaatcatttgaaatttgaatgattttgaataccactagac--nnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgaca 356  Q
    |||||| || ||||||||||||||||||||||| |||||||         |||||||||||| ||| ||||||||||||||||||       ||||||||    
T  29111684 acaatccttcgaaatttgaatgattttgaatactactagactttttttttaagtgattaagaatctagattgaataccacaagactttttttaaatgaca 29111585  T
Q  357 aagactcttgattgaataccacaagact 384  Q
    |||| ||||||||||||| |||||||||    
T  29111584 aagaatcttgattgaataacacaagact 29111557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 159 - 384
Target Start/End: Complemental strand, 31895907 - 31895682
Alignment:
Q  159 aaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttattaa 258  Q
    ||||||||||  |||||||||||| ||||||||||||||||||||||| ||||||| || |||||||||||||||||||||||||||||  |||||||||    
T  31895907 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactagaaaatcccacaaaatccatcaaaatccaatttattaa 31895808  T
Q  259 acaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaa 358  Q
    |||||| || |||||||||||||||||||||||||| ||||       || |||| || ||||||||||||||||  ||||||       ||||||||||    
T  31895807 acaatccttcgaaatttgaatgattttgaataccacaagactttttttaaatgatgaaaagtcttgattgaatacttcaagacttttttaaaatgacaaa 31895708  T
Q  359 gactcttgattgaataccacaagact 384  Q
    || |||||||||||||||||||||||    
T  31895707 gagtcttgattgaataccacaagact 31895682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 157 - 384
Target Start/End: Original strand, 14262425 - 14262652
Alignment:
Q  157 agaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttatt 256  Q
    ||||||||||||  |||||||| ||| ||||||||||||||||||||||| ||||||| || || ||||||||||||||||||||||||||  |||||||    
T  14262425 agaaaaacaatctcaagaaatcccatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttatt 14262524  T
Q  257 aaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgaca 356  Q
    |||||||| || ||||||| |||||||||||||||||| ||||       || |||| || | ||||||||||||||| ||||||       ||||||||    
T  14262525 aaacaatccttcgaaatttaaatgattttgaataccacaagactttttttaaatgatgaaaaatcttgattgaatacctcaagactttttaaaaatgaca 14262624  T
Q  357 aagactcttgattgaataccacaagact 384  Q
    |||| |||||||||||||||||||||||    
T  14262625 aagagtcttgattgaataccacaagact 14262652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 158 - 384
Target Start/End: Complemental strand, 7052057 - 7051831
Alignment:
Q  158 gaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttatta 257  Q
    |||||||||| ||||||||||||||| ||| |||||| |||||||| ||||||||||| | |||||||||| ||||||||||||||||||  ||||||||    
T  7052057 gaaaaacaattctaagaaatctcatgattttatgaaaaactttttcatgctaaaattttactagaaaatcctacaaaatccatcaaaatccaatttatta 7051958  T
Q  258 aacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaa 357  Q
    ||||||| || |||||||||||||||||||||| |||  |||       ||||||| |||||||||||||| ||||||||||||       |||||||||    
T  7051957 aacaatccttcgaaatttgaatgattttgaatatcacacgactttttttaagtgatgaagagtcttgattgtataccacaagactttttttaaatgacaa 7051858  T
Q  358 agactcttgattgaataccacaagact 384  Q
    ||| ||||||| | |||||||||||||    
T  7051857 agaatcttgatcgtataccacaagact 7051831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 171 - 384
Target Start/End: Complemental strand, 34773608 - 34773395
Alignment:
Q  171 aagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcatttga 270  Q
    |||||||||||| ||||||||||||||||||||||| ||||||| || |  ||||||||||||||||||||||||||  ||||||||||||||| || ||    
T  34773608 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactgcaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcga 34773509  T
Q  271 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagactcttgattg 370  Q
    |||||||||||||||||||||||| |||        || |||| || ||||||||||||||||| ||||||       |||||||||||| |||||||||    
T  34773508 aatttgaatgattttgaataccacaagattttttttaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattg 34773409  T
Q  371 aataccacaagact 384  Q
    ||||||||||||||    
T  34773408 aataccacaagact 34773395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 157 - 384
Target Start/End: Original strand, 34759042 - 34759270
Alignment:
Q  157 agaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttatt 256  Q
    ||||||| ||||  |||||||||||| ||||||||||||| ||||||||| ||||||| || || ||||||||||||||||||||||||||  |||||||    
T  34759042 agaaaaataatctcaagaaatctcatcttttcatgaaagattttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttatt 34759141  T
Q  257 aaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagac-nnnnnnnaaatgac 355  Q
    |||||||| || |||||||||||||||||||||||||| ||||       ||||||| || ||||||||||||||||  ||||||        |||||||    
T  34759142 aaacaatccttggaaatttgaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattgaatacttcaagactttttttaaaatgac 34759241  T
Q  356 aaagactcttgattgaataccacaagact 384  Q
    ||||| |||||||||||||||||||||||    
T  34759242 aaagagtcttgattgaataccacaagact 34759270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 157 - 341
Target Start/End: Complemental strand, 7497288 - 7497105
Alignment:
Q  157 agaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttatt 256  Q
    ||||||| ||||  |||||||||||| ||||||||||||||||||||||| ||||||| || || ||||||| ||||||||||||||||||  |||||||    
T  7497288 agaaaaataatctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcc-acaaaatccatcaaaatccaatttatt 7497190  T
Q  257 aaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagac 341  Q
    ||||| || || |||||||||||||||||||||||||| ||||       ||||||| || | ||||||||||||||||||||||    
T  7497189 aaacactccttcgaaatttgaatgattttgaataccacaagactttttttaagtgatgaaaaatcttgattgaataccacaagac 7497105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 157 - 384
Target Start/End: Original strand, 30385061 - 30385276
Alignment:
Q  157 agaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttatt 256  Q
    ||||||||||||  |||||||||||| ||||||||||||||||| |  || ||||||| || || ||||||||||||||||||          |||||||    
T  30385061 agaaaaacaatctcaagaaatctcatcttttcatgaaagactttgt--tgttaaaattacactacaaaatcccacaaaatcca----------atttatt 30385148  T
Q  257 aaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgaca 356  Q
    |||||||| || |||||||||||||||||||||||||| ||||       ||||||| || | | ||||||||||||| ||| ||       ||||||||    
T  30385149 aaacaatccttcgaaatttgaatgattttgaataccacaagactttttttaagtgatgaaaatttttgattgaatacctcaatacttttttaaaatgaca 30385248  T
Q  357 aagactcttgattgaataccacaagact 384  Q
    |||| |||||||||||||||||||||||    
T  30385249 aagagtcttgattgaataccacaagact 30385276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 159 - 294
Target Start/End: Complemental strand, 31067694 - 31067569
Alignment:
Q  159 aaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttattaa 258  Q
    ||||||||||  |||||||||||| |||| |||||||||||||||||| ||||||| || || ||||||||||||||||||          |||||||||    
T  31067694 aaaaacaatctcaagaaatctcatctttttatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatcca----------atttattaa 31067605  T
Q  259 acaatcatttgaaatttgaatgattttgaataccac 294  Q
    |||||| || ||||||||||||||||||||||||||    
T  31067604 acaatccttcgaaatttgaatgattttgaataccac 31067569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 223 - 379
Target Start/End: Complemental strand, 657101 - 656957
Alignment:
Q  223 aaatcccacaaaatccatcaaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtct 322  Q
    |||||||||||||||||||| |||| |||||||||||           |||||||||||||| ||||||||||||||       ||||||||||||||||    
T  657101 aaatcccacaaaatccatcagaatcagatttattaaa-----------aatttgaatgatttagaataccactagactttttttaagtgattaagagtct 657013  T
Q  323 tgattgaataccacaagacnnnnnnnaaatgacaaagactcttgattgaataccaca 379  Q
    |||||||||||||||||||       ||||| |||||| ||||||||||||| ||||    
T  657012 tgattgaataccacaagactttttttaaatg-caaagaatcttgattgaataacaca 656957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 141 - 213
Target Start/End: Complemental strand, 2238741 - 2238668
Alignment:
Q  141 agtaaaatcttaaaagagaaaaa-caatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaat 213  Q
    ||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||| |||||| | |||||||    
T  2238741 agtaaaatcttaaaagaaaaaaaacaatcttaagaaatctcatgttttcatgaaagattttttcatactaaaat 2238668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 159 - 279
Target Start/End: Original strand, 4200431 - 4200541
Alignment:
Q  159 aaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttattaa 258  Q
    ||||||||||  |||||||||||| ||||||||||||||||||||||| ||||||| ||          | ||||||||||||||||||  |||||||||    
T  4200431 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattaca----------ctacaaaatccatcaaaatccaatttattaa 4200520  T
Q  259 acaatcatttgaaatttgaat 279  Q
    |||||| || |||||||||||    
T  4200521 acaatccttcgaaatttgaat 4200541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 140 - 192
Target Start/End: Complemental strand, 657165 - 657114
Alignment:
Q  140 tagtaaaatcttaaaagagaaaaacaatcctaagaaatctcatgttttcatga 192  Q
    ||||||||| |||||||| ||||||||||||||||||| ||||||||||||||    
T  657165 tagtaaaattttaaaaga-aaaaacaatcctaagaaatttcatgttttcatga 657114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 250 - 382
Target Start/End: Complemental strand, 3848330 - 3848200
Alignment:
Q  250 atttattaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnna 349  Q
    ||||||||||||||||||  |||||| |||||||||||||||||| | ||       ||||||| |  |||||||||||| |||||||| ||       |    
T  3848330 atttattaaacaatcattcaaaatttaaatgattttgaataccacaaaactttttttaagtgatga--agtcttgattgattaccacaatacttgtttta 3848233  T
Q  350 aatgacaaagactcttgattgaataccacaaga 382  Q
    ||||||||| | | |||||||||||||||||||    
T  3848232 aatgacaaaaagttttgattgaataccacaaga 3848200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 203
Target Start/End: Original strand, 11113733 - 11113771
Alignment:
Q  165 aatcctaagaaatctcatgttttcatgaaagactttttc 203  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  11113733 aatcctaagaaatctcatgttttcatgaaagacgttttc 11113771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 175; Significance: 4e-94; HSPs: 65)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 175; E-Value: 4e-94
Query Start/End: Original strand, 140 - 384
Target Start/End: Complemental strand, 25331361 - 25331117
Alignment:
Q  140 tagtaaaatcttaaaagagaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatcca 239  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  25331361 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 25331262  T
Q  240 tcaaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 339  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||       |||||||||||||||||||||||||||||||||    
T  25331261 tcaaaatctgatttattaaacaatcctttgaaatttgaatgattttgaatatcactagactttttttaagtgattaagagtcttgattgaataccacaag 25331162  T
Q  340 acnnnnnnnaaatgacaaagactcttgattgaataccacaagact 384  Q
    ||       |||||||||||| ||||||||||||| |||||||||    
T  25331161 actttttttaaatgacaaagaatcttgattgaataacacaagact 25331117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 140 - 384
Target Start/End: Complemental strand, 22202245 - 22202001
Alignment:
Q  140 tagtaaaatcttaaaagagaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatcca 239  Q
    ||||||||| |||||||| ||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  22202245 tagtaaaattttaaaagaaaaaaacaatgctaagaaatctaatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 22202146  T
Q  240 tcaaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 339  Q
    ||||||| | ||||||||||||||| |||||||||| |||||||||||||||||||||||       |||||||||||||||||||||||||||||||||    
T  22202145 tcaaaattttatttattaaacaatcttttgaaattttaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaag 22202046  T
Q  340 acnnnnnnnaaatgacaaagactcttgattgaataccacaagact 384  Q
    ||       |||||||||||| ||||||||||||| |||||||||    
T  22202045 actttttttaaatgacaaagaatcttgattgaataacacaagact 22202001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 140 - 384
Target Start/End: Original strand, 41881056 - 41881303
Alignment:
Q  140 tagtaaaatcttaaaagagaaaa--acaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatc 237  Q
    |||||||||||||||||| ||||  ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  41881056 tagtaaaatcttaaaagaaaaaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatc 41881155  T
Q  238 catcaaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagac-nnnnnnnaagtgattaagagtcttgattgaataccac 336  Q
    ||||||||||||||||||||||||||| || |||||||||||||||||||||||||||| ||        ||||||||||||||||||||||||||||||    
T  41881156 catcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactaaacttttttttaagtgattaagagtcttgattgaataccac 41881255  T
Q  337 aagacnnnnnnnaaatgacaaagactcttgattgaataccacaagact 384  Q
    |||||       |||||||||||| ||||||||||||| |||||||||    
T  41881256 aagactttttttaaatgacaaagaatcttgattgaataacacaagact 41881303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 151; E-Value: 8e-80
Query Start/End: Original strand, 154 - 374
Target Start/End: Complemental strand, 1113109 - 1112889
Alignment:
Q  154 aagagaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgattt 253  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||| || |||||||| | ||| |||||||||||||||||||||||||||||||    
T  1113109 aagaaaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgttaaaattttactaggaaatcccacaaaatccatcaaaatctgattt 1113010  T
Q  254 attaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatg 353  Q
    ||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||       |||||    
T  1113009 attaaacaatcatttgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaagactttttttaaatg 1112910  T
Q  354 acaaagactcttgattgaata 374  Q
    ||||||| |||||||||||||    
T  1112909 acaaagaatcttgattgaata 1112889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 151; E-Value: 8e-80
Query Start/End: Original strand, 140 - 384
Target Start/End: Original strand, 30009653 - 30009897
Alignment:
Q  140 tagtaaaatcttaaaagagaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatcca 239  Q
    |||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| | |||||||||||||||||||||    
T  30009653 tagtaaaatcttaaaagaaaaaaacaatcttaagaaatctcatgttttcatgaaagactttttcatgctaaaattttactagaaaatcccacaaaatcca 30009752  T
Q  240 tcaaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 339  Q
    ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||       ||||||||||||||||||||||||||||||| |    
T  30009753 tcaaaatctgatttattaaacaatcatttaaaatttaaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacagg 30009852  T
Q  340 acnnnnnnnaaatgacaaagactcttgattgaataccacaagact 384  Q
    ||       |||||| ||||| | |||||| |||| |||||||||    
T  30009853 actttttttaaatgataaagaattttgattaaataacacaagact 30009897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 140 - 379
Target Start/End: Original strand, 34228559 - 34228798
Alignment:
Q  140 tagtaaaatcttaaaagagaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatcca 239  Q
    |||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| ||||||||||    
T  34228559 tagtaaaatcttaaaagaaaaaaacaatcttaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcctacaaaatcca 34228658  T
Q  240 tcaaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 339  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||       |||||||||||| | |||||||||||||||| |    
T  34228659 tcaaaatctgatttattaaacaatcattcgaaatttcaatgattttgaataccactagactttttttaagtgattaagaattttgattgaataccacatg 34228758  T
Q  340 acnnnnnnnaaatgacaaagactcttgattgaataccaca 379  Q
    ||       |||||||||||| ||||||||||||| ||||    
T  34228759 actttttttaaatgacaaagaatcttgattgaataacaca 34228798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 142 - 384
Target Start/End: Complemental strand, 1045035 - 1044795
Alignment:
Q  142 gtaaaatcttaaaagagaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatc 241  Q
    |||||||||||||||| ||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  1045035 gtaaaatcttaaaagaaaaaaacaattctaagaaatcttatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatc 1044936  T
Q  242 aaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagac 341  Q
    ||||||||||||||||||||||| || |||| ||||||| ||||||||||||||||||       |||||||||||||||||||||||||||||||||||    
T  1044935 aaaatctgatttattaaacaatccttcgaaagttgaatggttttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaagac 1044836  T
Q  342 nnnnnnnaaatgacaaagactcttgattgaataccacaagact 384  Q
           ||||||||| || ||||||||||||| |||||||||    
T  1044835 --tttttaaatgacaaggaatcttgattgaataacacaagact 1044795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 140 - 384
Target Start/End: Complemental strand, 12113176 - 12112931
Alignment:
Q  140 tagtaaaatctt-aaaagagaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatcc 238  Q
    |||||||||||| |||||| ||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| |||||||||||    
T  12113176 tagtaaaatctttaaaagaaaaaaacaatcccaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaattccacaaaatcc 12113077  T
Q  239 atcaaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaa 338  Q
    || ||||||||||||||||||||||| || ||||||||||||||||||||||||| |||||       |||||||||||||| |||||||||||||||||    
T  12113076 attaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccattagactttttttaagtgattaagagttttgattgaataccacaa 12112977  T
Q  339 gacnnnnnnnaaatgacaaagactcttgattgaataccacaagact 384  Q
    |||       |||||||||||| ||||||||||||| |||||||||    
T  12112976 gactttttttaaatgacaaagaatcttgattgaataacacaagact 12112931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 140 - 384
Target Start/End: Complemental strand, 55303077 - 55302829
Alignment:
Q  140 tagtaaaatcttaaaagagaaaaa----caatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaa 235  Q
    |||||||||||||||||| |||||    ||||| |||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| |    
T  55303077 tagtaaaatcttaaaagaaaaaaaacaacaatcttaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaata 55302978  T
Q  236 tccatcaaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatacca 335  Q
    ||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||    
T  55302977 tccatcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaatacca 55302878  T
Q  336 caagacnnnnnnnaaatgacaaagactcttgattgaataccacaagact 384  Q
    || |||       |||||||||||| ||||||||||| | |||||||||    
T  55302877 catgacttttttaaaatgacaaagaatcttgattgaaaaacacaagact 55302829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 141 - 384
Target Start/End: Original strand, 39479332 - 39479577
Alignment:
Q  141 agtaaaatcttaaaagagaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccat 240  Q
    ||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  39479332 agtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgctttcatgaaagactttttcctgctaaaatttcactagaaaatcccacaaaatccat 39479431  T
Q  241 caaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagac--nnnnnnnaagtgattaagagtcttgattgaataccacaa 338  Q
    |||||||||||||||||||||||  || |||||||||||||||||||||||||| || |         ||||||||||||||||||||||||||||||||    
T  39479432 caaaatctgatttattaaacaattcttcgaaatttgaatgattttgaataccacaagtctttttttttaagtgattaagagtcttgattgaataccacaa 39479531  T
Q  339 gacnnnnnnnaaatgacaaagactcttgattgaataccacaagact 384  Q
    |||       ||||||||| || ||||||||||||| |||||||||    
T  39479532 gactttttttaaatgacaaggaatcttgattgaataacacaagact 39479577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 140 - 384
Target Start/End: Original strand, 32950811 - 32951056
Alignment:
Q  140 tagtaaaatcttaaaagagaaaaacaa-tcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatcc 238  Q
    |||||||||||||||||| ||||| || || ||||||||||||||||||||||||||| |||||| ||||||||||||| |||||||||||||||||| |    
T  32950811 tagtaaaatcttaaaagaaaaaaaaaaatcttaagaaatctcatgttttcatgaaagaatttttcatgctaaaatttcactagaaaatcccacaaaattc 32950910  T
Q  239 atcaaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaa 338  Q
    |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||     
T  32950911 atcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacat 32951010  T
Q  339 gacnnnnnnnaaatgacaaagactcttgattgaataccacaagact 384  Q
    |||       |||||||||| | ||||||||||||| |||||||||    
T  32951011 gactttttttaaatgacaaataatcttgattgaataacacaagact 32951056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 140 - 384
Target Start/End: Complemental strand, 7007605 - 7007360
Alignment:
Q  140 tagtaaaatcttaaaagagaaaaa-caatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatcc 238  Q
    |||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||| |  ||||| ||||||||||||| |||||||||||||||||| |    
T  7007605 tagtaaaatcttaaaagaaaaaaaacaatcttaagaaatctcatgttttcatgaaaaaaattttcatgctaaaatttcactagaaaatcccacaaaattc 7007506  T
Q  239 atcaaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaa 338  Q
    |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||     
T  7007505 atcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacat 7007406  T
Q  339 gacnnnnnnnaaatgacaaagactcttgattgaataccacaagact 384  Q
    |||       |||||||| ||| ||||||||||||| |||||||||    
T  7007405 gactttttttaaatgacagagaatcttgattgaataacacaagact 7007360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 140 - 384
Target Start/End: Original strand, 37046425 - 37046672
Alignment:
Q  140 tagtaaaatcttaaaagagaaaaa-caatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaattt-cattagaaaatcccacaaaatc 237  Q
    |||||||||||||||||| ||||| ||||||||||||||||||| |||||||||||||||||||| ||||||||||| || |||||||| ||||||||||    
T  37046425 tagtaaaatcttaaaagaaaaaaaacaatcctaagaaatctcatattttcatgaaagactttttcatgctaaaattttcactagaaaattccacaaaatc 37046524  T
Q  238 catcaaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagac-nnnnnnnaagtgattaagagtcttgattgaataccac 336  Q
    ||||||||||||||||||||||||||| || ||||||||||||||||| |||| ||||||||        ||||||||||||||||||||||||||||||    
T  37046525 catcaaaatctgatttattaaacaatccttcgaaatttgaatgattttaaatatcactagacttttttttaagtgattaagagtcttgattgaataccac 37046624  T
Q  337 aagacnnnnnnnaaatgacaaagactcttgattgaataccacaagact 384  Q
    || ||       |||||||||||| ||||||||||||| |||||||||    
T  37046625 aaaactttttttaaatgacaaagaatcttgattgaataacacaagact 37046672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 140 - 341
Target Start/End: Complemental strand, 42786913 - 42786713
Alignment:
Q  140 tagtaaaatcttaaaagagaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatcca 239  Q
    |||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||  || |||||||||| |||||||| ||||||||||||    
T  42786913 tagtaaaatcttaaaaga-aaaaacaatcataagaaatctcatgttttcatgaaagacttttttatgataaaatttcactagaaaattccacaaaatcca 42786815  T
Q  240 tcaaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 339  Q
    ||||||| ||||||||||||||||| || |||||||||||||||||||||||||||||||       || ||||||||||||||||||||||||||||||    
T  42786814 tcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaaatgattaagagtcttgattgaataccacaag 42786715  T
Q  340 ac 341  Q
    ||    
T  42786714 ac 42786713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 140 - 384
Target Start/End: Original strand, 24130957 - 24131192
Alignment:
Q  140 tagtaaaatcttaaaagagaaaaacaatcctaagaaatctcatgttttcatgaaagacttttt-cttgctaaaatttcattagaaaatcccacaaaatcc 238  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| | | ||||||||||| ||||||||||||||||||||    
T  24130957 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagatttttttcatcctaaaatttcactagaaaatcccacaaaatcc 24131056  T
Q  239 atcaaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaa 338  Q
    ||||||||||||||||||||||||||||| ||||          |||||||||||||||||       ||||||||||||||||||||||||||||||||    
T  24131057 atcaaaatctgatttattaaacaatcattcgaaa----------tttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaa 24131146  T
Q  339 gacnnnnnnnaaatgacaaagactcttgattgaataccacaagact 384  Q
    |||       |||||||||||| ||||||||||||| |||||||||    
T  24131147 gactttttttaaatgacaaagaatcttgattgaataacacaagact 24131192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 140 - 374
Target Start/End: Original strand, 46635624 - 46635852
Alignment:
Q  140 tagtaaaatcttaaaagagaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatcca 239  Q
    ||||||||| |||||||| ||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||| || ||||||||||||||||      
T  46635624 tagtaaaattttaaaagaaaaaaacaatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactaaaaaatcccacaaaatc-- 46635721  T
Q  240 tcaaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 339  Q
        ||||| ||||||||||||||| || ||||||||||||||||||||||| |||| ||       |||||||||||||||||||||||||||||||||    
T  46635722 ----aatcttatttattaaacaatccttcgaaatttgaatgattttgaatactactaaactttttttaagtgattaagagtcttgattgaataccacaag 46635817  T
Q  340 acnnnnnnnaaatgacaaagactcttgattgaata 374  Q
    ||       |||||||||||| |||||||||||||    
T  46635818 actttttttaaatgacaaagaatcttgattgaata 46635852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 194 - 384
Target Start/End: Complemental strand, 28541874 - 28541684
Alignment:
Q  194 agactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcatttgaaatttgaatgattttgaatacca 293  Q
    |||||||||| ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  28541874 agactttttcatgctaaaatttcactagaaaattccacaaaatccatcaaaatctgatttattaaacaatcattcgaaatttgaatgattttgaatacca 28541775  T
Q  294 ctagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagactcttgattgaataccacaagact 384  Q
    ||||||       |||||||||||||||||||||||||||||| ||||       |||||||||||| ||||||||||||| |||||||||    
T  28541774 ctagactttttttaagtgattaagagtcttgattgaataccacgagactttttttaaatgacaaagaatcttgattgaataacacaagact 28541684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 142 - 327
Target Start/End: Complemental strand, 41321038 - 41320853
Alignment:
Q  142 gtaaaatcttaaaagagaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatc 241  Q
    |||||||||||||||| |||| ||||| |||||||||||||||||| ||||||||||||||| | ||||||||||| ||||| |||||||||||||||||    
T  41321038 gtaaaatcttaaaagaaaaaatcaatcttaagaaatctcatgtttttatgaaagactttttcatactaaaatttcactagaacatcccacaaaatccatc 41320939  T
Q  242 aaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgatt 327  Q
    ||||||||||||||||||||||| || |||||||||||||||||||||||||||||||       || ||||||||||||||||||    
T  41320938 aaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaaatgattaagagtcttgatt 41320853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 140 - 340
Target Start/End: Complemental strand, 3436823 - 3436623
Alignment:
Q  140 tagtaaaatcttaaaagagaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatcca 239  Q
    |||||||||||||||||| ||||||||| ||||||||||| |||||||||||||| |||||||| || |||||||||| || ||||||||||||||| ||    
T  3436823 tagtaaaatcttaaaagaaaaaaacaattctaagaaatcttatgttttcatgaaaaactttttcatgttaaaatttcactacaaaatcccacaaaattca 3436724  T
Q  240 tcaaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 339  Q
    ||||||||||||||||||||||||| || ||||||||||||||||||||||||| ||||        || ||||||||||||||||||||||| ||||||    
T  3436723 tcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccattagattttttttaaatgattaagagtcttgattgaatatcacaag 3436624  T
Q  340 a 340  Q
    |    
T  3436623 a 3436623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 141 - 384
Target Start/End: Original strand, 31314719 - 31314948
Alignment:
Q  141 agtaaaatcttaaaagagaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccat 240  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||              
T  31314719 agtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatccca---------- 31314808  T
Q  241 caaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaaga 340  Q
    |||||||||||||||||||||||| || |||||||||||||||||||||||||||||||       |||||||||||||||    |||||||||||||||    
T  31314809 caaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtc----ttgaataccacaaga 31314904  T
Q  341 cnnnnnnnaaatgacaaagactcttgattgaataccacaagact 384  Q
    |       |||||||||||| |||||||| |||| |||||||||    
T  31314905 ctttttttaaatgacaaagaatcttgattaaataacacaagact 31314948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 159 - 384
Target Start/End: Complemental strand, 5441615 - 5441390
Alignment:
Q  159 aaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttattaa 258  Q
    ||||||||||  |||||||||||| ||||||||||||||||||||||| ||||||| || || ||||||||||||||||||||||||||  |||||||||    
T  5441615 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaa 5441516  T
Q  259 acaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaa 358  Q
    |||||| || |||||||||||||||||||||||||| ||||       || |||| || ||||||||||||||||| ||||||       ||||||||||    
T  5441515 acaatccttcgaaatttgaatgattttgaataccacaagactttttttaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaa 5441416  T
Q  359 gactcttgattgaataccacaagact 384  Q
    || |||||||||||||||||||||||    
T  5441415 gagtcttgattgaataccacaagact 5441390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 159 - 384
Target Start/End: Complemental strand, 27768267 - 27768042
Alignment:
Q  159 aaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttattaa 258  Q
    ||||||||||  |||||||||||| ||||||||||||||||||||||| ||||||| || || ||||||||||||||||||||||||||  |||||||||    
T  27768267 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaa 27768168  T
Q  259 acaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaa 358  Q
    |||||| || |||||||||||||||||||||||||| ||||       || |||| || ||||||||||||||||| ||||||       ||||||||||    
T  27768167 acaatccttcgaaatttgaatgattttgaataccacaagactttttttaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaa 27768068  T
Q  359 gactcttgattgaataccacaagact 384  Q
    || |||||||||||||||||||||||    
T  27768067 gagtcttgattgaataccacaagact 27768042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 159 - 384
Target Start/End: Complemental strand, 54341355 - 54341130
Alignment:
Q  159 aaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttattaa 258  Q
    ||||||||||  |||||||||||| ||||||||||||||||||||||| ||||||| || || ||||||||||||||||||||||||||  |||||||||    
T  54341355 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaa 54341256  T
Q  259 acaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaa 358  Q
    |||||| || |||||||||||||||||||||||||| ||||       || |||| || ||||||||||||||||| ||||||       ||||||||||    
T  54341255 acaatccttcgaaatttgaatgattttgaataccacaagactttttttaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaa 54341156  T
Q  359 gactcttgattgaataccacaagact 384  Q
    || |||||||||||||||| ||||||    
T  54341155 gagtcttgattgaataccataagact 54341130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 193 - 340
Target Start/End: Complemental strand, 25446227 - 25446080
Alignment:
Q  193 aagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcatttgaaatttgaatgattttgaatacc 292  Q
    ||||||||||| ||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  25446227 aagactttttcatgctaaaatttcactaaaaaatcccacaaaatccatcaaaatctgatttattaaacaatcattcgaaatttgaatgattttgaatacc 25446128  T
Q  293 actagacnnnnnnnaagtgattaagagtcttgattgaataccacaaga 340  Q
    |||||||       ||||||||||||||||||||||||||||||||||    
T  25446127 actagactttttttaagtgattaagagtcttgattgaataccacaaga 25446080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 140 - 382
Target Start/End: Complemental strand, 53276069 - 53275827
Alignment:
Q  140 tagtaaaatcttaaaagagaaaaacaatcctaagaaatctcatgttttca-tgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatcc 238  Q
    |||||||||||||||||| |||||||||||||| |||||| | ||||| | |||||||||||||| ||||||||||| ||||||||||| ||||||||||    
T  53276069 tagtaaaatcttaaaaga-aaaaacaatcctaaaaaatctaaagtttttaatgaaagactttttcatgctaaaattttattagaaaatctcacaaaatcc 53275971  T
Q  239 atcaaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaa 338  Q
    ||||||||||||||||||| |||||| || ||||||||||||||||| |||| ||||||||       |||||||||| | |||||||||||||| ||||    
T  53275970 atcaaaatctgatttattacacaatccttcgaaatttgaatgattttaaatatcactagactttttttaagtgattaaaaatcttgattgaatactacaa 53275871  T
Q  339 gacnnnnnnnaaatgacaaagactcttgattgaataccacaaga 382  Q
    |||       |||||||||| | |||| |||||||| |||||||    
T  53275870 gactttttttaaatgacaaataatctttattgaataacacaaga 53275827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 157 - 384
Target Start/End: Original strand, 54853461 - 54853688
Alignment:
Q  157 agaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttatt 256  Q
    ||||||||||||  |||||||||||| ||||||||||||| ||||||||| ||||||| || || ||||||||||||||||||||||||||  |||||||    
T  54853461 agaaaaacaatctcaagaaatctcatcttttcatgaaagattttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttatt 54853560  T
Q  257 aaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgaca 356  Q
    |||||||| |||||||||||||| |||||||||||||| ||||       ||||||| || ||||||||||||||||  ||||||       |||||| |    
T  54853561 aaacaatcctttgaaatttgaataattttgaataccacaagactttttttaagtgatgaaaagtcttgattgaatacttcaagacttttttaaaatgaaa 54853660  T
Q  357 aagactcttgattgaataccacaagact 384  Q
    |||| |||||||||||||||||||||||    
T  54853661 aagagtcttgattgaataccacaagact 54853688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 140 - 384
Target Start/End: Original strand, 40537136 - 40537365
Alignment:
Q  140 tagtaaaatcttaaaagagaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatcca 239  Q
    |||||||||||||||| | ||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||          ||||||||||||    
T  40537136 tagtaaaatcttaaaaaaaaaaaaaaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttca----------ccacaaaatcca 40537225  T
Q  240 tcaaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 339  Q
    |||||||| ||||||||||||||||||| ||||||| ||||||||||||||||     ||       |||||||||||||| ||||||||||||||||||    
T  40537226 tcaaaatcagatttattaaacaatcattcgaaatttaaatgattttgaatacc-----acattttttaagtgattaagagttttgattgaataccacaag 40537320  T
Q  340 acnnnnnnnaaatgacaaagactcttgattgaataccacaagact 384  Q
    ||       |||||||||||| ||||||||||||| |||||||||    
T  40537321 actttttttaaatgacaaagagtcttgattgaataacacaagact 40537365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 185 - 384
Target Start/End: Original strand, 19740929 - 19741128
Alignment:
Q  185 tttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcatttgaaatttgaatgattt 284  Q
    |||||||||||||||||||  |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||| || ||||||||||||||||    
T  19740929 tttcatgaaagactttttcaagctaaaatttcactagaaaatcccacaaaatccatcaaaatctaatttattaaacaatccttcgaaatttgaatgattt 19741028  T
Q  285 tgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagactcttgattgaataccacaagact 384  Q
    | |||||||| ||||       |||||||||| |||||||| ||||||||||| |||       |||||||||||| ||||||||||||| |||||||||    
T  19741029 ttaataccacaagactttttttaagtgattaaaagtcttgactgaataccacatgactttttataaatgacaaagaatcttgattgaataacacaagact 19741128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 159 - 382
Target Start/End: Original strand, 37828397 - 37828620
Alignment:
Q  159 aaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttattaa 258  Q
    ||||||||||  |||||||||||| ||||||||||||||||||||||  ||||||| || || ||||||||||||||||||||||||||  |||||||||    
T  37828397 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttctttttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaa 37828496  T
Q  259 acaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaa 358  Q
    |||||| || |||||||||||||||||||||||||| ||||       || |||| || | ||||||||||||||| ||||||       ||||||||||    
T  37828497 acaatccttcgaaatttgaatgattttgaataccacaagactttttttaaatgatgaaaaatcttgattgaatacctcaagactttttaaaaatgacaaa 37828596  T
Q  359 gactcttgattgaataccacaaga 382  Q
    || |||||||||||||||||||||    
T  37828597 gagtcttgattgaataccacaaga 37828620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 157 - 380
Target Start/End: Complemental strand, 51321134 - 51320911
Alignment:
Q  157 agaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttatt 256  Q
    ||||||||||||  |||||||||||| ||||||||||| ||||||||||| ||||||| || || |||||  |||||||||||||||||||  |||||||    
T  51321134 agaaaaacaatctcaagaaatctcatcttttcatgaaaaactttttcttgttaaaattacactataaaattacacaaaatccatcaaaatccaatttatt 51321035  T
Q  257 aaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgaca 356  Q
    |||||||| || |||||||||||||||||||||||||| ||||       ||||||| || ||||||||||||||||| ||||||       ||||||||    
T  51321034 aaacaatccttcgaaatttgaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattgaatacctcaagacttttttaaaatgaca 51320935  T
Q  357 aagactcttgattgaataccacaa 380  Q
    |||| |||||||||||||||||||    
T  51320934 aagagtcttgattgaataccacaa 51320911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 157 - 384
Target Start/End: Complemental strand, 37916040 - 37915813
Alignment:
Q  157 agaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttatt 256  Q
    ||||||||||||  || |||||| || |||||||||| |||||||||||| ||||| | || || ||||||||||||||||||||||||||  |||||||    
T  37916040 agaaaaacaatctcaataaatcttatcttttcatgaatgactttttcttgttaaaagtacactacaaaatcccacaaaatccatcaaaatccaatttatt 37915941  T
Q  257 aaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgaca 356  Q
    |||||||| || |||||||||||||||||||||||||| ||||       ||||||| || ||||||||||||||||| ||||||       |||||| |    
T  37915940 aaacaatccttcgaaatttgaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattgaatacctcaagacttttttaaaatgata 37915841  T
Q  357 aagactcttgattgaataccacaagact 384  Q
     ||| |||||||||||||||||||||||    
T  37915840 gagagtcttgattgaataccacaagact 37915813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 159 - 384
Target Start/End: Complemental strand, 9163279 - 9163062
Alignment:
Q  159 aaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttattaa 258  Q
    |||||||||| |||||||||||||||||||||||        ||| ||||||||||||| |||||||| ||||||||||||||||||| | |||||||||    
T  9163279 aaaaacaatcataagaaatctcatgttttcatga--------ttcatgctaaaatttcactagaaaattccacaaaatccatcaaaatttaatttattaa 9163188  T
Q  259 acaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaa 358  Q
    |||||| || |||||||||||||||||||||| ||| ||||       | ||||| || | ||||||||||||||||||||||       ||||||||||    
T  9163187 acaatccttcgaaatttgaatgattttgaatatcacaagactttttttatgtgatgaaaaatcttgattgaataccacaagactttttttaaatgacaaa 9163088  T
Q  359 gactcttgattgaataccacaagact 384  Q
    || |||||||||||||||||||||||    
T  9163087 gagtcttgattgaataccacaagact 9163062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 147 - 296
Target Start/End: Original strand, 27454061 - 27454210
Alignment:
Q  147 atcttaaaagagaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaat 246  Q
    ||||||||||| |||||||||| ||| |||| | ||||||||||||||||||||||| ||| ||||||||| |||||||| ||||||||| |||||||||    
T  27454061 atcttaaaagaaaaaaacaatcttaacaaatattatgttttcatgaaagactttttcatgccaaaatttcactagaaaattccacaaaattcatcaaaat 27454160  T
Q  247 ctgatttattaaacaatcatttgaaatttgaatgattttgaataccacta 296  Q
    ||||||||||||| |||| ||  |||||||||||||||||||||||||||    
T  27454161 ctgatttattaaataatctttcaaaatttgaatgattttgaataccacta 27454210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 194 - 299
Target Start/End: Original strand, 7249795 - 7249900
Alignment:
Q  194 agactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcatttgaaatttgaatgattttgaatacca 293  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||    
T  7249795 agactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaatacca 7249894  T
Q  294 ctagac 299  Q
    ||||||    
T  7249895 ctagac 7249900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 157 - 384
Target Start/End: Complemental strand, 32322304 - 32322077
Alignment:
Q  157 agaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttatt 256  Q
    ||||||||||||  |||||||||||| |||| ||||||||| |||||||  ||||||| || || |||||||||||||||||||||||||   |||||||    
T  32322304 agaaaaacaatctcaagaaatctcatctttttatgaaagacattttcttattaaaattacactacaaaatcccacaaaatccatcaaaattcaatttatt 32322205  T
Q  257 aaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgaca 356  Q
    |||||||| || |||||||||||||||||||||||||| ||||       ||||||| || | ||||||||||||||| ||||||       ||||||||    
T  32322204 aaacaatccttcgaaatttgaatgattttgaataccacaagactatttttaagtgatgaaaaatcttgattgaatacctcaagacttttttaaaatgaca 32322105  T
Q  357 aagactcttgattgaataccacaagact 384  Q
    |||| |||||||| |||| |||| ||||    
T  32322104 aagagtcttgattaaatatcacatgact 32322077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 157 - 384
Target Start/End: Complemental strand, 23987417 - 23987200
Alignment:
Q  157 agaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttatt 256  Q
    ||||||||||||  |||||||||||| ||||||||||||||||||||||| ||||||| || ||          |||||||||||||||||| |||||||    
T  23987417 agaaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacacta----------caaaatccatcaaaatctaatttatt 23987328  T
Q  257 aaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgaca 356  Q
    |||||||| || |||||||||||||||||||||||||| ||||       ||||||| || ||| ||||||||||||| ||||||       ||||||||    
T  23987327 aaacaatccttcgaaatttgaatgattttgaataccacaagactttttttaagtgatgaaaagttttgattgaatacctcaagacttttttaaaatgaca 23987228  T
Q  357 aagactcttgattgaataccacaagact 384  Q
    |||| | |||||||||||||||||||||    
T  23987227 aagagtattgattgaataccacaagact 23987200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 144 - 380
Target Start/End: Original strand, 39307234 - 39307469
Alignment:
Q  144 aaaatcttaaaagagaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaa 243  Q
    |||||||||||||| ||||||||| ||||||||||||||||||| || | | |||||||| || |||||||||| |||||||||||||||||| ||||||    
T  39307234 aaaatcttaaaaga-aaaaacaattctaagaaatctcatgtttttatcagaaactttttcatgttaaaatttcactagaaaatcccacaaaattcatcaa 39307332  T
Q  244 aatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnn 343  Q
    ||    ||| |||||| |||| || ||||||||||||||| |||||||||| ||||       || |||| |||| ||||||||||||||||||||||      
T  39307333 aactcaattcattaaataatctttagaaatttgaatgattatgaataccacaagactttttttaaatgatgaagaatcttgattgaataccacaagactt 39307432  T
Q  344 nnnnnaaatgacaaagactcttgattgaataccacaa 380  Q
         ||||| |||| | |||||||||||||||||||    
T  39307433 ttttaaaatggcaaaaaatcttgattgaataccacaa 39307469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 159 - 299
Target Start/End: Complemental strand, 48261338 - 48261198
Alignment:
Q  159 aaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttattaa 258  Q
    ||||||||||  |||||||||||| ||||||||||||| ||||||||| ||||||| || || ||||||||||||||||||||||||||  |||||||||    
T  48261338 aaaaacaatctcaagaaatctcatattttcatgaaagattttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaa 48261239  T
Q  259 acaatcatttgaaatttgaatgattttgaataccactagac 299  Q
    |||||| ||  ||||||||||||||||||||||||| ||||    
T  48261238 acaatccttcaaaatttgaatgattttgaataccacaagac 48261198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 208 - 384
Target Start/End: Complemental strand, 23465117 - 23464941
Alignment:
Q  208 taaaatttcattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnna 307  Q
    |||||||| | |||||||||||||||||||||||||| ||||||||||||||||||| || |||||||||||| ||||||||||||||||||       |    
T  23465117 taaaatttaactagaaaatcccacaaaatccatcaaattctgatttattaaacaatccttcgaaatttgaatggttttgaataccactagacttatttta 23465018  T
Q  308 agtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagactcttgattgaataccacaagact 384  Q
    |||||||||||||||||||||||||  |||| ||       ||||||||| || |||||||||||||  ||||||||    
T  23465017 agtgattaagagtcttgattgaatattacaaaactttttttaaatgacaaggaatcttgattgaataatacaagact 23464941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 221 - 384
Target Start/End: Original strand, 25504696 - 25504859
Alignment:
Q  221 gaaaatcccacaaaatccatcaaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagt 320  Q
    |||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||| |||| |||       ||||||||||||||    
T  25504696 gaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaatatcactggactttttttaagtgattaagagt 25504795  T
Q  321 cttgattgaataccacaagacnnnnnnnaaatgacaaagactcttgattgaataccacaagact 384  Q
    |||||||||||| |||||||        ||||||  |||| ||||||||||||| |||||||||    
T  25504796 cttgattgaatatcacaagaatttttttaaatgatcaagaatcttgattgaataacacaagact 25504859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 159 - 384
Target Start/End: Original strand, 30967304 - 30967519
Alignment:
Q  159 aaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttattaa 258  Q
    ||||||||||  ||||||||| || ||||||||||||| ||||||||| ||||||| || || ||||||||||||||||||          |||||||||    
T  30967304 aaaaacaatctcaagaaatcttattttttcatgaaagattttttcttgttaaaattacactacaaaatcccacaaaatcca----------atttattaa 30967393  T
Q  259 acaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaa 358  Q
    |||||| ||||||||||||||||||||||||||||| ||||       ||||||| || | ||||||||||||||| ||| ||       ||||||||||    
T  30967394 acaatcctttgaaatttgaatgattttgaataccacaagactttttttaagtgatgaaaaatcttgattgaatacctcaaaacttttttaaaatgacaaa 30967493  T
Q  359 gactcttgattgaataccacaagact 384  Q
    || |||||||||||||||||||||||    
T  30967494 gagtcttgattgaataccacaagact 30967519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 173 - 384
Target Start/End: Original strand, 44770862 - 44771074
Alignment:
Q  173 gaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcatttgaaa 272  Q
    ||||||||||||  |||||||||||||||||||  |||||||||| ||||||||||||||||||||| |||||||  ||||||||||||||| ||  |||    
T  44770862 gaaatctcatgtcgtcatgaaagactttttcttcttaaaatttcactagaaaatcccacaaaatccaccaaaatccaatttattaaacaatccttcaaaa 44770961  T
Q  273 tttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaa-taccacaagacnnnnnnnaaatgacaaagactcttgattga 371  Q
    |||||||||||||||||||||  |||        ||||||| || | ||||||||||| |||| |||||        |||||||||||| ||||||||||    
T  44770962 tttgaatgattttgaataccatgagattttttttaagtgatgaaaaatcttgattgaattacctcaagatttttttaaaatgacaaagagtcttgattga 44771061  T
Q  372 ataccacaagact 384  Q
    ||| |||||||||    
T  44771062 atatcacaagact 44771074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 140 - 258
Target Start/End: Complemental strand, 8712094 - 8711978
Alignment:
Q  140 tagtaaaatcttaaaagagaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatcca 239  Q
    ||||||||| ||||||||  |||||||||  ||||||||||||||||| ||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  8712094 tagtaaaattttaaaaga--aaaacaatctcaagaaatctcatgttttgatgaaagactttttcttgctaaaatttcactataaaatcccacaaaatcca 8711997  T
Q  240 tcaaaatctgatttattaa 258  Q
    ||||||||  |||||||||    
T  8711996 tcaaaatccaatttattaa 8711978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 157 - 293
Target Start/End: Original strand, 56445348 - 56445474
Alignment:
Q  157 agaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttatt 256  Q
    ||||||||||||  |||||||||||||| || ||||||||||||||||||||||| ||||| |||||||||||||||||||||          |||||||    
T  56445348 agaaaaacaatctcaagaaatctcatgtctttatgaaagactttttcttgctaaagtttcactagaaaatcccacaaaatcca----------atttatt 56445437  T
Q  257 aaacaatcatttgaaatttgaatgattttgaatacca 293  Q
    ||||||||||| |||||||||||||||||||||||||    
T  56445438 aaacaatcattcgaaatttgaatgattttgaatacca 56445474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 157 - 258
Target Start/End: Complemental strand, 24736548 - 24736447
Alignment:
Q  157 agaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttatt 256  Q
    ||||||||||||  ||||||||||||||||||||||||||||| |||||| |||||||||| ||||||||| |||||||||||||||||||  |||||||    
T  24736548 agaaaaacaatcacaagaaatctcatgttttcatgaaagacttcttcttgttaaaatttcactagaaaatctcacaaaatccatcaaaatccaatttatt 24736449  T
Q  257 aa 258  Q
    ||    
T  24736448 aa 24736447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 141 - 384
Target Start/End: Original strand, 36479221 - 36479451
Alignment:
Q  141 agtaaaatcttaaaagagaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccat 240  Q
    |||||||| ||||||||  |||| ||||  |||||||||||||||||||| ||||||||||| |||||||||||||| ||           |||||||||    
T  36479221 agtaaaattttaaaaga--aaaataatctcaagaaatctcatgttttcataaaagacttttttttgctaaaatttcacta-----------aaaatccat 36479307  T
Q  241 caaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaaga 340  Q
    |||||||  |||||||||| |||| || ||||||||||| |||||||||||||| ||||       ||||||| || | |||| |||||||||| |||||    
T  36479308 caaaatccaatttattaaataatccttcgaaatttgaataattttgaataccacgagactttttttaagtgatgaaaaatcttaattgaatacctcaaga 36479407  T
Q  341 cnnnnnnnaaatgacaaagactcttgattgaataccacaagact 384  Q
    |       |||||||||||| | |||||||||||||||||||||    
T  36479408 cttttttaaaatgacaaagagttttgattgaataccacaagact 36479451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 157 - 384
Target Start/End: Complemental strand, 12913427 - 12913210
Alignment:
Q  157 agaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttatt 256  Q
    ||||||| ||| | |||||||||||||| ||||||||| ||||||||||| |||||||||| |||||||||||||||||||||          |||||||    
T  12913427 agaaaaataattccaagaaatctcatgtcttcatgaaatactttttcttgttaaaatttcactagaaaatcccacaaaatcca----------atttatt 12913338  T
Q  257 aaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgaca 356  Q
    |||||||| ||  ||||||||||||||||||||||||  ||||       || |||| || |  |||||||||||||| ||||||       ||||||||    
T  12913337 aaacaatccttcaaaatttgaatgattttgaataccatgagactttttttaaatgatgaaaaagcttgattgaatacctcaagacttttttaaaatgaca 12913238  T
Q  357 aagactcttgattgaataccacaagact 384  Q
    |||| |||| ||| ||||||||||||||    
T  12913237 aagagtcttaattaaataccacaagact 12913210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 171 - 380
Target Start/End: Complemental strand, 41725321 - 41725115
Alignment:
Q  171 aagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcatttga 270  Q
    |||||||||||| ||||||||||||| ||||||||| ||||||| || || ||||||||||||||| ||||||||||  ||   |||||||||| ||  |    
T  41725321 aagaaatctcatcttttcatgaaagattttttcttgttaaaattacactataaaatcccacaaaattcatcaaaatccaat---ttaaacaatccttcaa 41725225  T
Q  271 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagactcttgattg 370  Q
    |||||||||||||||||||| ||| ||||       | ||||| || ||||||||||| ||||  ||||||       |||||||||||| | |||||||    
T  41725224 aatttgaatgattttgaatatcacaagactttttttaggtgatgaaaagtcttgattgcatacatcaagacttttttaaaatgacaaagagtattgattg 41725125  T
Q  371 aataccacaa 380  Q
    ||||||||||    
T  41725124 aataccacaa 41725115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 157 - 384
Target Start/End: Original strand, 49501512 - 49501731
Alignment:
Q  157 agaaaaacaatcctaagaaatctcatgttttcat--gaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgattta 254  Q
    ||||||||||||  |||||||||||| |||| ||  |||||||||||||||| ||||||| || || ||||| ||||||||||||          |||||    
T  49501512 agaaaaacaatctcaagaaatctcatctttttatatgaaagactttttcttgttaaaattacactacaaaattccacaaaatcca----------attta 49501601  T
Q  255 ttaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatga 354  Q
    ||||||||||||| ||||||||||||||||||||| |||| ||||       ||||||| || ||||||||||||||||| |||||        ||||||    
T  49501602 ttaaacaatcattcgaaatttgaatgattttgaatgccacaagacattttttaagtgatgaaaagtcttgattgaatacctcaagatttatttaaaatga 49501701  T
Q  355 caaagactcttgattgaataccacaagact 384  Q
    |||||| ||||||||||||||  |||||||    
T  49501702 caaagagtcttgattgaatactgcaagact 49501731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 157 - 384
Target Start/End: Original strand, 49507577 - 49507796
Alignment:
Q  157 agaaaaacaatcctaagaaatctcatgttttcat--gaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgattta 254  Q
    ||||||||||||  |||||||||||| |||| ||  |||||||||||||||| ||||||| || || ||||| ||||||||||||          |||||    
T  49507577 agaaaaacaatctcaagaaatctcatctttttatatgaaagactttttcttgttaaaattacactacaaaattccacaaaatcca----------attta 49507666  T
Q  255 ttaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatga 354  Q
    ||||||||||||| ||||||||||||||||||||| |||| ||||       ||||||| || ||||||||||||||||| |||||        ||||||    
T  49507667 ttaaacaatcattcgaaatttgaatgattttgaatgccacaagacattttttaagtgatgaaaagtcttgattgaatacctcaagatttatttaaaatga 49507766  T
Q  355 caaagactcttgattgaataccacaagact 384  Q
    |||||| ||||||||||||||  |||||||    
T  49507767 caaagagtcttgattgaatactgcaagact 49507796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 208 - 384
Target Start/End: Complemental strand, 28371086 - 28370910
Alignment:
Q  208 taaaatttcattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnna 307  Q
    |||||||||| |||||||||||||||||| || ||||||   ||||||||||||||| ||| ||||||||||||||||||||||||  ||||       |    
T  28371086 taaaatttcactagaaaatcccacaaaattcaccaaaattcaatttattaaacaatcctttaaaatttgaatgattttgaataccatgagactttattta 28370987  T
Q  308 agtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagactcttgattgaataccacaagact 384  Q
    |||||| || ||| ||||||||||| | ||||||       ||| |||||||| | |||||||||||||||||||||    
T  28370986 agtgataaaaagttttgattgaatatctcaagacttttttaaaacgacaaagagttttgattgaataccacaagact 28370910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 228 - 384
Target Start/End: Original strand, 29649731 - 29649887
Alignment:
Q  228 ccacaaaatccatcaaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgatt 327  Q
    ||||||||||||||||||||  ||||||||||||||| || |||||||||||||||||||||||||| ||||       ||||||| || ||||||||||    
T  29649731 ccacaaaatccatcaaaatccaatttattaaacaatctttcgaaatttgaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgatt 29649830  T
Q  328 gaataccacaagacnnnnnnnaaatgacaaagactcttgattgaataccacaagact 384  Q
    ||||||| ||||||       |||||||||||| | || ||  ||||||||||||||    
T  29649831 gaatacctcaagacttttttaaaatgacaaagagttttaatctaataccacaagact 29649887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 241 - 384
Target Start/End: Original strand, 49834890 - 49835033
Alignment:
Q  241 caaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaaga 340  Q
    |||||||  ||||||||||||||| || |||||||||||||||||||||||||| ||||       ||||||| || ||||||||||||||||| ||||     
T  49834890 caaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattgaatacctcaagc 49834989  T
Q  341 cnnnnnnnaaatgacaaagactcttgattgaataccacaagact 384  Q
    |       |||||||||||| |||||||||||||||||||||||    
T  49834990 ctttgttaaaatgacaaagagtcttgattgaataccacaagact 49835033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 140 - 239
Target Start/End: Complemental strand, 11090532 - 11090435
Alignment:
Q  140 tagtaaaatcttaaaagagaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatcca 239  Q
    ||||||||| |||||| ||||||||||||||||||||||||||||||| || |||||||||||  ||||||||||||| || ||||||||||||||||||    
T  11090532 tagtaaaat-ttaaaa-agaaaaacaatcctaagaaatctcatgtttttattaaagactttttaatgctaaaatttcactaaaaaatcccacaaaatcca 11090435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 157 - 341
Target Start/End: Complemental strand, 28484101 - 28483928
Alignment:
Q  157 agaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttatt 256  Q
    ||||||| |||| ||||||||||| | ||||||||||||||||||||||| |||| || || || ||||||| ||||||||||          |||||||    
T  28484101 agaaaaataatcttaagaaatctcgtcttttcatgaaagactttttcttgttaaa-ttacactacaaaatcctacaaaatcca----------atttatt 28484013  T
Q  257 aaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagac 341  Q
    ||| |||| || |||||||||||||||||||||||||| ||||       ||||||| || ||||||||||||||||| ||||||    
T  28484012 aaataatccttcgaaatttgaatgattttgaataccacgagactttttttaagtgatgaaaagtcttgattgaatacctcaagac 28483928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 173 - 279
Target Start/End: Complemental strand, 20021531 - 20021424
Alignment:
Q  173 gaaatctcatgttttcatgaaagactttttctt-gctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcatttgaa 271  Q
    ||||||| |||| ||||||||||| ||||| || | ||||||||||||| ||||||||| |||||||| |||||||| ||||||||||||||| ||| ||    
T  20021531 gaaatcttatgtcttcatgaaagattttttttttgttaaaatttcattaaaaaatcccataaaatccagcaaaatctaatttattaaacaatcctttaaa 20021432  T
Q  272 atttgaat 279  Q
    ||||||||    
T  20021431 atttgaat 20021424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 157 - 299
Target Start/End: Complemental strand, 5800181 - 5800049
Alignment:
Q  157 agaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttatt 256  Q
    ||||||||||||  || |||||| || ||||||| ||||||||||||||| ||||||| |  || |||||| |||||||||||          |||||||    
T  5800181 agaaaaacaatctcaaaaaatcttatcttttcattaaagactttttcttgttaaaattactctacaaaatctcacaaaatcca----------atttatt 5800092  T
Q  257 aaacaatcatttgaaatttgaatgattttgaataccactagac 299  Q
    |||||||| ||||||||||||||||||||||||||||| ||||    
T  5800091 aaacaatcctttgaaatttgaatgattttgaataccacaagac 5800049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 174 - 384
Target Start/End: Complemental strand, 50018437 - 50018237
Alignment:
Q  174 aaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcatttgaaat 273  Q
    ||||||||| ||||| ||||||||||||||||| ||||||| || ||          |||||||||| |||||   ||||||||||||||| ||  ||||    
T  50018437 aaatctcatcttttcttgaaagactttttcttgttaaaattacacta----------caaaatccattaaaattcaatttattaaacaatccttcaaaat 50018348  T
Q  274 ttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagactcttgattgaat 373  Q
    ||||||||| ||||||||||| ||||       || |||  || ||||||||| ||||||| ||||||       |||||||||||| ||||||||||||    
T  50018347 ttgaatgatcttgaataccacaagactttttttaaatgaagaaaagtcttgatggaatacctcaagacttttttaaaatgacaaagagtcttgattgaat 50018248  T
Q  374 accacaagact 384  Q
    |||| ||||||    
T  50018247 accataagact 50018237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 157 - 384
Target Start/End: Original strand, 32684001 - 32684207
Alignment:
Q  157 agaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttatt 256  Q
    ||||||||||||  || ||||||||| ||||||||||||||||||||||| ||||||| ||          | ||||||||||          |||||||    
T  32684001 agaaaaacaatctcaataaatctcatcttttcatgaaagactttttcttgttaaaattaca----------ctacaaaatcca----------atttatt 32684080  T
Q  257 aaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgaca 356  Q
    |||||||| || |||||||||||||||||||||||||| ||||       || |||| || ||||||||||||||||| ||| ||       ||||||||    
T  32684081 aaacaatccttcgaaatttgaatgattttgaataccacaagacttttttaaa-tgatgaaaagtcttgattgaatacctcaatacttttttaaaatgaca 32684179  T
Q  357 aagactcttgattgaataccacaagact 384  Q
    |||| |||| ||||||||||||||||||    
T  32684180 aagaatcttaattgaataccacaagact 32684207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 170 - 299
Target Start/End: Original strand, 41581795 - 41581923
Alignment:
Q  170 taagaaatctcatgttttcatgaaagacttttt-cttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcattt 268  Q
    ||||||||||||||||| ||||||| | ||||| | || |||||||||| ||||||||||||||||||  |||  ||||  |||||||||||||| |||     
T  41581795 taagaaatctcatgtttacatgaaatatttttttcatgttaaaatttcactagaaaatcccacaaaatatatc--aatccaatttattaaacaattattc 41581892  T
Q  269 gaaatttgaatgattttgaataccactagac 299  Q
     |||||||||||| | | |||||||| ||||    
T  41581893 aaaatttgaatgactctaaataccacgagac 41581923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 316 - 384
Target Start/End: Complemental strand, 37915839 - 37915771
Alignment:
Q  316 agagtcttgattgaataccacaagacnnnnnnnaaatgacaaagactcttgattgaataccacaagact 384  Q
    ||||||||||||||||||||||||||       || ||||||| | |||||||||||||||||||||||    
T  37915839 agagtcttgattgaataccacaagactttttttaagtgacaaaaagtcttgattgaataccacaagact 37915771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 157 - 214
Target Start/End: Original strand, 49834826 - 49834883
Alignment:
Q  157 agaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatt 214  Q
    ||||||||||||  |||||||||||| |||| ||||||||||| |||||| |||||||    
T  49834826 agaaaaacaatctcaagaaatctcatcttttaatgaaagacttcttcttgttaaaatt 49834883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 140 - 174
Target Start/End: Complemental strand, 25446258 - 25446224
Alignment:
Q  140 tagtaaaatcttaaaagagaaaaacaatcctaaga 174  Q
    |||||||||||||||||| ||||||||||||||||    
T  25446258 tagtaaaatcttaaaagaaaaaaacaatcctaaga 25446224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 190
Target Start/End: Complemental strand, 49469459 - 49469411
Alignment:
Q  141 agtaaaatcttaaaagagaaaaacaatcctaagaaatctcatgttttcat 190  Q
    |||||||| ||| |||| |||||||||| |||||||||||||||||||||    
T  49469459 agtaaaattttagaagaaaaaaacaatc-taagaaatctcatgttttcat 49469411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 315 - 384
Target Start/End: Original strand, 40537338 - 40537407
Alignment:
Q  315 aagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagactcttgattgaataccacaagact 384  Q
    |||||||||||||||||| ||||||||       |||| | ||||| |||| ||||||||||||||||||    
T  40537338 aagagtcttgattgaataacacaagactttttttaaattagaaagagtcttaattgaataccacaagact 40537407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 175; Significance: 4e-94; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 175; E-Value: 4e-94
Query Start/End: Original strand, 140 - 384
Target Start/End: Original strand, 31170602 - 31170846
Alignment:
Q  140 tagtaaaatcttaaaagagaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatcca 239  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  31170602 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 31170701  T
Q  240 tcaaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 339  Q
    ||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||    
T  31170702 tcaaaatctgatttattaaacaatccttggaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaag 31170801  T
Q  340 acnnnnnnnaaatgacaaagactcttgattgaataccacaagact 384  Q
    ||       |||||||||||| ||||||||||||| |||||||||    
T  31170802 actttttttaaatgacaaagaatcttgattgaataacacaagact 31170846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 140 - 384
Target Start/End: Complemental strand, 16269923 - 16269679
Alignment:
Q  140 tagtaaaatcttaaaagagaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatcca 239  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| || ||||||||||||||||||    
T  16269923 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactataaaatcccacaaaatcca 16269824  T
Q  240 tcaaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 339  Q
    ||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||    
T  16269823 tcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaag 16269724  T
Q  340 acnnnnnnnaaatgacaaagactcttgattgaataccacaagact 384  Q
    ||       |||||||||||| ||||||||||||| |||||||||    
T  16269723 actttttttaaatgacaaagaatcttgattgaataacacaagact 16269679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 140 - 384
Target Start/End: Complemental strand, 20605468 - 20605224
Alignment:
Q  140 tagtaaaatcttaaaagagaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatcca 239  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  20605468 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 20605369  T
Q  240 tcaaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 339  Q
    ||||||||||||||||||||||||| || ||||||| |||||||||||||||||||||||       |||||||||||||||||||||||||||||||||    
T  20605368 tcaaaatctgatttattaaacaatccttcgaaattttaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaag 20605269  T
Q  340 acnnnnnnnaaatgacaaagactcttgattgaataccacaagact 384  Q
    ||       |||||||||||| ||||||||||||| |||||||||    
T  20605268 actttttttaaatgacaaagaatcttgattgaataacacaagact 20605224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 140 - 384
Target Start/End: Complemental strand, 24776586 - 24776343
Alignment:
Q  140 tagtaaaatcttaaaagagaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatcca 239  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  24776586 tagtaaaatcttaaaaga-aaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 24776488  T
Q  240 tcaaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 339  Q
    ||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||    
T  24776487 tcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaag 24776388  T
Q  340 acnnnnnnnaaatgacaaagactcttgattgaataccacaagact 384  Q
    ||       |||||||||||| ||||||||||||| |||||||||    
T  24776387 actttttttaaatgacaaagaatcttgattgaataacacaagact 24776343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 163; E-Value: 6e-87
Query Start/End: Original strand, 140 - 384
Target Start/End: Original strand, 14198555 - 14198799
Alignment:
Q  140 tagtaaaatcttaaaagagaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatcca 239  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| |||||||||||||||||||||    
T  14198555 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagaatttttcatgctaaaatttcactagaaaatcccacaaaatcca 14198654  T
Q  240 tcaaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 339  Q
    ||||||||||||||||||||||||| || ||||||||||||||||||||||||||| |||       |||||||||||||||||||||||||||||||||    
T  14198655 tcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactggactttttttaagtgattaagagtcttgattgaataccacaag 14198754  T
Q  340 acnnnnnnnaaatgacaaagactcttgattgaataccacaagact 384  Q
    ||       |||||||||||| | ||||||||||| |||||||||    
T  14198755 actttttttaaatgacaaagaattttgattgaataacacaagact 14198799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 140 - 384
Target Start/End: Complemental strand, 12407612 - 12407368
Alignment:
Q  140 tagtaaaatcttaaaagagaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatcca 239  Q
    |||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| || |||||||||| |||||||||||||||||||||    
T  12407612 tagtaaaatcttaaaagaaaaaaacaatcttaagaaatctcatgttttcatgaaagactttttcatggtaaaatttcactagaaaatcccacaaaatcca 12407513  T
Q  240 tcaaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 339  Q
    ||||||||||||||||||||||||| ||  ||||||||||||||||||||||||||||||       |||||||||||||||| ||||||||||||||||    
T  12407512 tcaaaatctgatttattaaacaatccttcaaaatttgaatgattttgaataccactagactttttttaagtgattaagagtctcgattgaataccacaag 12407413  T
Q  340 acnnnnnnnaaatgacaaagactcttgattgaataccacaagact 384  Q
    ||       |||||||||||| ||||||||||||| |||||||||    
T  12407412 actttttttaaatgacaaagaatcttgattgaataacacaagact 12407368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 140 - 384
Target Start/End: Complemental strand, 43847878 - 43847634
Alignment:
Q  140 tagtaaaatcttaaaagagaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatcca 239  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| |||||||| ||||||||||||    
T  43847878 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgacagactttttcatgctaaaatttcactagaaaattccacaaaatcca 43847779  T
Q  240 tcaaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 339  Q
    ||||| ||||||||||||||||||| || ||||||||||||||||||||||| |||||||       |||||||||||||||||||||||||||||||||    
T  43847778 tcaaattctgatttattaaacaatccttcgaaatttgaatgattttgaatacaactagactttttttaagtgattaagagtcttgattgaataccacaag 43847679  T
Q  340 acnnnnnnnaaatgacaaagactcttgattgaataccacaagact 384  Q
    ||       |||||||||||| ||||||||||||| |||||||||    
T  43847678 actttttttaaatgacaaagaatcttgattgaataacacaagact 43847634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 140 - 384
Target Start/End: Original strand, 305443 - 305687
Alignment:
Q  140 tagtaaaatcttaaaagagaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatcca 239  Q
    |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| ||||||||| |||||||||||    
T  305443 tagtaaaatcttaaaagaaataaacaatcctaagaaatctcatgttttcatgaaagactttttcattctaaaatttcactagaaaatctcacaaaatcca 305542  T
Q  240 tcaaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 339  Q
    || |||||||||||||||||||||||||  ||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||    
T  305543 tcgaaatctgatttattaaacaatcattcaaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaag 305642  T
Q  340 acnnnnnnnaaatgacaaagactcttgattgaataccacaagact 384  Q
    ||       |||||||||| | ||||||||||||| |||||||||    
T  305643 acttttttcaaatgacaaataatcttgattgaataacacaagact 305687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 141 - 384
Target Start/End: Original strand, 5093025 - 5093269
Alignment:
Q  141 agtaaaatcttaaaagagaaaa-acaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatcca 239  Q
    ||||||||||||||||| |||| ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  5093025 agtaaaatcttaaaagaaaaaaaacaatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcattagaaaatcccacaaaatcca 5093124  T
Q  240 tcaaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 339  Q
    ||||||||||||||||||||||||| ||  |||||||||||||||||||||| |||||||       ||||||||||| |||||||||||||||||||||    
T  5093125 tcaaaatctgatttattaaacaatccttcaaaatttgaatgattttgaatactactagactttttttaagtgattaagcgtcttgattgaataccacaag 5093224  T
Q  340 acnnnnnnnaaatgacaaagactcttgattgaataccacaagact 384  Q
    ||       |||||||||||| ||||||||||||| |||||||||    
T  5093225 actttttttaaatgacaaagaatcttgattgaataacacaagact 5093269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 140 - 384
Target Start/End: Original strand, 22551741 - 22551985
Alignment:
Q  140 tagtaaaatcttaaaagagaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatcca 239  Q
    |||||||||||||||||  |||||||||| ||||||||||||||||||||||||| |||||||| ||||||||||||| |||||||||||||||||||||    
T  22551741 tagtaaaatcttaaaaggaaaaaacaatcataagaaatctcatgttttcatgaaatactttttcatgctaaaatttcactagaaaatcccacaaaatcca 22551840  T
Q  240 tcaaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 339  Q
    ||||||| | ||||| |||||||||||| ||||||||||| |||||||||||||||||||       |||||||||| ||||||||||||||||||||||    
T  22551841 tcaaaatttaatttaataaacaatcattcgaaatttgaataattttgaataccactagactttttttaagtgattaaaagtcttgattgaataccacaag 22551940  T
Q  340 acnnnnnnnaaatgacaaagactcttgattgaataccacaagact 384  Q
    ||       |||||||||||| ||||||||||||| |||||||||    
T  22551941 actttttttaaatgacaaagaatcttgattgaataacacaagact 22551985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 140 - 380
Target Start/End: Complemental strand, 35317294 - 35317054
Alignment:
Q  140 tagtaaaatcttaaaagagaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatcca 239  Q
    |||||||||||||||||| |||||||||  |||||||||| ||||||||||||||||||||||| ||||||||||||| |||||||| ||||||||||||    
T  35317294 tagtaaaatcttaaaagaaaaaaacaatgttaagaaatcttatgttttcatgaaagactttttcatgctaaaatttcactagaaaattccacaaaatcca 35317195  T
Q  240 tcaaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 339  Q
    ||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||  |||||    
T  35317194 tcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaatattacaag 35317095  T
Q  340 acnnnnnnnaaatgacaaagactcttgattgaataccacaa 380  Q
    ||       |||||||||||| ||||||||||||| |||||    
T  35317094 actttttttaaatgacaaagaatcttgattgaataacacaa 35317054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 140 - 384
Target Start/End: Complemental strand, 44765998 - 44765763
Alignment:
Q  140 tagtaaaatcttaaaagagaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatcca 239  Q
    ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||          ||||||||||||| |||||||||||||||||||||    
T  44765998 tagtaaaattttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaaa---------tgctaaaatttcactagaaaatcccacaaaatcca 44765908  T
Q  240 tcaaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 339  Q
    ||||||||| ||||||||||||||| || |||||||||||||||||||||||||||||||       |||||||||||||||| ||||||||||||||||    
T  44765907 tcaaaatcttatttattaaacaatctttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtctcgattgaataccacaag 44765808  T
Q  340 acnnnnnnnaaatgacaaagactcttgattgaataccacaagact 384  Q
    ||       |||||||||||| ||||||||||||| |||||||||    
T  44765807 actttttttaaatgacaaagaatcttgattgaataacacaagact 44765763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 140 - 384
Target Start/End: Complemental strand, 1789676 - 1789430
Alignment:
Q  140 tagtaaaatcttaaaagagaaaaacaatcctaagaaatctca-tg-ttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatc 237  Q
    ||||||||| |||||||| ||||| ||||||||||| | | | || |||| ||||||||||||||| |||||||||||||||||||||||||||||||||    
T  1789676 tagtaaaattttaaaagaaaaaaataatcctaagaattttgaatgattttgatgaaagactttttcatgctaaaatttcattagaaaatcccacaaaatc 1789577  T
Q  238 catcaaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccaca 337  Q
    ||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||       |||||||||||||| ||||||||||| || |    
T  1789576 catcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagttttgattgaatatcata 1789477  T
Q  338 agacnnnnnnnaaatgacaaagactcttgattgaataccacaagact 384  Q
    ||||       |||||||||||| ||||||||||||| |||||||||    
T  1789476 agactttttttaaatgacaaagaatcttgattgaataacacaagact 1789430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 140 - 379
Target Start/End: Complemental strand, 9120358 - 9120119
Alignment:
Q  140 tagtaaaatcttaaaagagaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatcca 239  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||| | | ||||||||||| |||||||||||||||||||||    
T  9120358 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagatttttccatactaaaatttcactagaaaatcccacaaaatcca 9120259  T
Q  240 tcaaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 339  Q
    ||||||||| ||||||||||||||| ||| |||| |||||||||||||||| |||||||        |||||||||||| ||||||||||||| ||||||    
T  9120258 tcaaaatctaatttattaaacaatcctttaaaatctgaatgattttgaatatcactagattttttttaagtgattaagaatcttgattgaataacacaag 9120159  T
Q  340 acnnnnnnnaaatgacaaagactcttgattgaataccaca 379  Q
    ||       ||||   ||||| ||||||||||||||||||    
T  9120158 acttttttaaaattggaaagagtcttgattgaataccaca 9120119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 140 - 384
Target Start/End: Complemental strand, 32125486 - 32125238
Alignment:
Q  140 tagtaaaatcttaaaagagaaaaacaatcct-aagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatcc 238  Q
    |||||||||||||||||| |||||||||  | |||||||||||| |||||||||||||||||||| ||||||||||| | ||||||||||||||||||||    
T  32125486 tagtaaaatcttaaaagaaaaaaacaatttttaagaaatctcatattttcatgaaagactttttcatgctaaaattttactagaaaatcccacaaaatcc 32125387  T
Q  239 atcaaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtg---attaagagtcttgattgaatacca 335  Q
    |||||||||||||||||||||||||| || ||||||||||||||||||||||||||| |||       || ||   ||||||||||||||||||||||||    
T  32125386 atcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccacttgactttttttaaatgatcattaagagtcttgattgaatacca 32125287  T
Q  336 caagacnnnnnnnaaatgacaaagactcttgattgaataccacaagact 384  Q
    || |||       |||||||||||| | ||||||||||| |||||||||    
T  32125286 catgactttttttaaatgacaaagaattttgattgaataacacaagact 32125238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 157 - 384
Target Start/End: Complemental strand, 28844770 - 28844543
Alignment:
Q  157 agaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttatt 256  Q
    ||||||||||||  |||||||||||| |||| |||||||||||||||||  ||||||| || || ||||| ||||||||||||||||||||| |||||||    
T  28844770 agaaaaacaatctcaagaaatctcatctttttatgaaagactttttcttattaaaattacactacaaaattccacaaaatccatcaaaatctaatttatt 28844671  T
Q  257 aaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgaca 356  Q
    |||||||| || |||||||||||||||||||||||||| ||||       ||||||| || ||||||||||||||||| ||||||       ||||||||    
T  28844670 aaacaatccttcgaaatttgaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattgaatacctcaagacttttttaaaatgaca 28844571  T
Q  357 aagactcttgattgaataccacaagact 384  Q
    |||| |||||||||||||||||||||||    
T  28844570 aagagtcttgattgaataccacaagact 28844543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 157 - 384
Target Start/End: Complemental strand, 10657621 - 10657394
Alignment:
Q  157 agaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttatt 256  Q
    ||||||||||||  ||||||| |||| ||||||||||| ||||||||||| ||||||| || || ||||||||||||||||||||||||||  |||||||    
T  10657621 agaaaaacaatctcaagaaatttcatcttttcatgaaatactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttatt 10657522  T
Q  257 aaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgaca 356  Q
    ||||||||||| |||||||||||||||||||||||||| ||||       ||||||| || ||||||||||||||||| ||| ||       ||||||||    
T  10657521 aaacaatcattcgaaatttgaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattgaatacctcaaaacttttttaaaatgaca 10657422  T
Q  357 aagactcttgattgaataccacaagact 384  Q
    |||  |||||||||||||||||||||||    
T  10657421 aaggatcttgattgaataccacaagact 10657394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 157 - 380
Target Start/End: Complemental strand, 33135837 - 33135615
Alignment:
Q  157 agaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttatt 256  Q
    ||||||||||||  |||||||||||| |||| |||||||||||||||||| ||||||| || || ||||||||||||||||||||||||||  |||||||    
T  33135837 agaaaaacaatctcaagaaatctcatttttt-atgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttatt 33135739  T
Q  257 aaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgaca 356  Q
    |||||||| || |||||||||||||||||||||||||| ||||       ||||||| || ||||||||||||||||| ||||||       ||||||||    
T  33135738 aaacaatccttcgaaatttgaatgattttgaataccacgagactttttttaagtgatgaaaagtcttgattgaatacctcaagacttttttaaaatgaca 33135639  T
Q  357 aagactcttgattgaataccacaa 380  Q
    |||| |||||||||||||||||||    
T  33135638 aagagtcttgattgaataccacaa 33135615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 157 - 379
Target Start/End: Complemental strand, 25288374 - 25288152
Alignment:
Q  157 agaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttatt 256  Q
    ||||||||||||  |||||||||||| |||||||||||||| || ||||| ||||||| || || ||||||||||||||| ||||||||||  |||||||    
T  25288374 agaaaaacaatctcaagaaatctcatcttttcatgaaagacgttctcttgttaaaattacactacaaaatcccacaaaattcatcaaaatccaatttatt 25288275  T
Q  257 aaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgaca 356  Q
    |||||||| || |||||||||||||||||||||||||| |||        ||||||| || |||||||| |||||||| ||||||       ||||||||    
T  25288274 aaacaatccttcgaaatttgaatgattttgaataccacaagattttttttaagtgatgaaaagtcttgaatgaatacctcaagacttttttaaaatgaca 25288175  T
Q  357 aagactcttgattgaataccaca 379  Q
    |||| ||||||||||||||||||    
T  25288174 aagagtcttgattgaataccaca 25288152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 157 - 384
Target Start/End: Original strand, 28740288 - 28740505
Alignment:
Q  157 agaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttatt 256  Q
    ||||||||||||  |||||||||||| |||| |||||||||||||||||| ||||||| ||          ||||||||||||||||||||  |||||||    
T  28740288 agaaaaacaatctcaagaaatctcatctttttatgaaagactttttcttgttaaaattaca----------ccacaaaatccatcaaaatccaatttatt 28740377  T
Q  257 aaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgaca 356  Q
    |||||||| || |||||||||||||||||||||||||| ||||       ||||||| || ||||||||||||||||| ||||||       ||||||||    
T  28740378 aaacaatccttcgaaatttgaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattgaatacctcaagacttttttaaaatgaca 28740477  T
Q  357 aagactcttgattgaataccacaagact 384  Q
    |||| |||||||||||||||||||||||    
T  28740478 aagagtcttgattgaataccacaagact 28740505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 159 - 374
Target Start/End: Complemental strand, 18177480 - 18177265
Alignment:
Q  159 aaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttattaa 258  Q
    ||||||||||  |||||||||||| |||| || ||||||||||||||| ||||||| || || ||||||||||||||||||||||||||  ||| |||||    
T  18177480 aaaaacaatctcaagaaatctcatctttttattaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaattaattaa 18177381  T
Q  259 acaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaa 358  Q
    |||||| || |||||||||||||||||||||||||| | ||       || |||| || ||||||||||||||||| ||||||       ||||||||||    
T  18177380 acaatccttcgaaatttgaatgattttgaataccacaaaactttttttaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaa 18177281  T
Q  359 gactcttgattgaata 374  Q
    || |||||||||||||    
T  18177280 gagtcttgattgaata 18177265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 159 - 384
Target Start/End: Complemental strand, 26788996 - 26788772
Alignment:
Q  159 aaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttattaa 258  Q
    ||||||||||  |||||||||||| ||   |||||||||||||||||| ||||||| || || ||||||||||||||||||||||||||  |||||||||    
T  26788996 aaaaacaatctcaagaaatctcatctt---atgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaa 26788900  T
Q  259 acaatcatttgaaatttgaatgattttgaataccactagac--nnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgaca 356  Q
    |||||| ||  ||||||||||||||||||||||||| ||||          | |||| || ||||||||||||||||| ||||||       ||||||||    
T  26788899 acaatccttcaaaatttgaatgattttgaataccacaagactttttttttgaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgaca 26788800  T
Q  357 aagactcttgattgaataccacaagact 384  Q
    |||| |||||||||||||||||||||||    
T  26788799 aagagtcttgattgaataccacaagact 26788772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 230 - 384
Target Start/End: Complemental strand, 7026746 - 7026592
Alignment:
Q  230 acaaaatccatcaaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 329  Q
    ||||||||||||||||||  ||||||||||||||| || |||||||||||||||||||||||||| ||||       || |||| || ||||||||||||    
T  7026746 acaaaatccatcaaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagactttttttaaatgatgaaaagtcttgattga 7026647  T
Q  330 ataccacaagacnnnnnnnaaatgacaaagactcttgattgaataccacaagact 384  Q
    ||||| ||||||       |||||||||||| |||||||||||||||||||||||    
T  7026646 atacctcaagacttttttaaaatgacaaagagtcttgattgaataccacaagact 7026592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 140 - 380
Target Start/End: Original strand, 26601191 - 26601418
Alignment:
Q  140 tagtaaaatcttaaaagagaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatcca 239  Q
    |||||||||||||||||| |||||||||||||| |||||| |||||||||| ||| ||||||  | | |||| ||||| ||||||||||||||||         
T  26601191 tagtaaaatcttaaaaga-aaaaacaatcctaaaaaatct-atgttttcatcaaaaacttttaat-gttaaagtttcactagaaaatcccacaaa----- 26601282  T
Q  240 tcaaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 339  Q
         |||||||||||||||||| |||| ||||||||||||||||||||||||||  |||       ||||||||||||||||||||||||||| |||||    
T  26601283 -----atctgatttattaaacaaacattcgaaatttgaatgattttgaataccacgtgactttttttaagtgattaagagtcttgattgaatactacaag 26601377  T
Q  340 acnnnnnnnaaatgacaaagactcttgattgaataccacaa 380  Q
    ||        ||||||||||| |||||||| |||| |||||    
T  26601378 acttttttttaatgacaaagagtcttgattaaataacacaa 26601418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 157 - 380
Target Start/End: Original strand, 10125295 - 10125510
Alignment:
Q  157 agaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttatt 256  Q
    |||||||||||| ||||||||||| |||||| |||||||||||||||||| |||||||||| || ||||||||||||||| ||          |||||||    
T  10125295 agaaaaacaatcttaagaaatctcgtgtttttatgaaagactttttcttgttaaaatttcactaaaaaatcccacaaaattca----------atttatt 10125384  T
Q  257 aaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaata--ccacaagacnnnnnnnaaatga 354  Q
    |||||||| ||||||||||||||||||||||||| ||  ||||       ||||||| || ||| |||||||||||   || |||||       ||||||    
T  10125385 aaacaatcctttgaaatttgaatgattttgaatatcatgagactttttttaagtgatgaaaagttttgattgaatatctcaaaagacttttttaaaatga 10125484  T
Q  355 caaagactcttgattgaataccacaa 380  Q
    |||||| |||||||||||||||||||    
T  10125485 caaagagtcttgattgaataccacaa 10125510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 159 - 282
Target Start/End: Complemental strand, 43078776 - 43078653
Alignment:
Q  159 aaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttattaa 258  Q
    ||||||||||  ||||||||| || |||| ||||||||||||||| || ||||||| || || ||||||||||||||||||| ||||||  |||||||||    
T  43078776 aaaaacaatctcaagaaatcttatctttttatgaaagactttttcatgttaaaattacactataaaatcccacaaaatccatgaaaatccaatttattaa 43078677  T
Q  259 acaatcatttgaaatttgaatgat 282  Q
    ||||||||| ||||||||||||||    
T  43078676 acaatcattcgaaatttgaatgat 43078653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 157 - 384
Target Start/End: Original strand, 13833427 - 13833644
Alignment:
Q  157 agaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttatt 256  Q
    |||||| |||||  |||||||||||| || |||||||||||||||||||| ||||||| || || ||||||||||||||||||          |||||||    
T  13833427 agaaaagcaatctcaagaaatctcatcttgtcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatcca----------atttatt 13833516  T
Q  257 aaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgaca 356  Q
    |||||||| ||  ||||||||||||||||||||||||  ||||       ||||||| || |||||||||||||||   ||||||       |||||| |    
T  13833517 aaacaatccttcaaaatttgaatgattttgaataccagaagactttttttaagtgatgaaaagtcttgattgaatatatcaagacttttttaaaatgata 13833616  T
Q  357 aagactcttgattgaataccacaagact 384  Q
    || | |||||||||||||||||||||||    
T  13833617 aaaagtcttgattgaataccacaagact 13833644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 159 - 374
Target Start/End: Complemental strand, 3463875 - 3463669
Alignment:
Q  159 aaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttattaa 258  Q
    ||||||||||  |||||||||||| ||||||||||||||||||||||| ||||||| || ||          |||||||||||||||||  |||||||||    
T  3463875 aaaaacaatctcaagaaatctcatattttcatgaaagactttttcttgttaaaattacacta----------caaaatccatcaaaatccaatttattaa 3463786  T
Q  259 acaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaa 358  Q
    |||||| ||||||| |||||||||||| |||||||| ||||       || |||| || ||||||||||||| ||| ||||||       ||||||||||    
T  3463785 acaatcctttgaaaattgaatgattttaaataccacaagactttttttaaatgatgaaaagtcttgattgaacacctcaagacttttttaaaatgacaaa 3463686  T
Q  359 ga-ctcttgattgaata 374  Q
    ||  |||||||||||||    
T  3463685 gagttcttgattgaata 3463669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 257 - 384
Target Start/End: Original strand, 215320 - 215447
Alignment:
Q  257 aaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgaca 356  Q
    |||||||| |||||| |||||||||||||||||||||| ||||       ||||||| || ||||||||||||||||| ||||||       || |||||    
T  215320 aaacaatcctttgaagtttgaatgattttgaataccacgagactttttttaagtgatgaaaagtcttgattgaatacctcaagactttttaaaattgaca 215419  T
Q  357 aagactcttgattgaataccacaagact 384  Q
    |||| |||||||||||||||||||||||    
T  215420 aagagtcttgattgaataccacaagact 215447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 241 - 380
Target Start/End: Complemental strand, 3574978 - 3574839
Alignment:
Q  241 caaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaaga 340  Q
    |||||||  ||||||||||||||| || |||||||||||||||||||||| ||| ||||       ||||||| || ||||||||||||||||| |||||    
T  3574978 caaaatccaatttattaaacaatccttcgaaatttgaatgattttgaatatcacaagactttttttaagtgatgaaaagtcttgattgaatacctcaaga 3574879  T
Q  341 cnnnnnnnaaatgacaaagactcttgattgaataccacaa 380  Q
    |       |||||||||  | |||||||||||||||||||    
T  3574878 cttttttaaaatgacaattagtcttgattgaataccacaa 3574839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 157 - 293
Target Start/End: Complemental strand, 379142 - 379016
Alignment:
Q  157 agaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttatt 256  Q
    ||||||||||||  || ||||||||| |||||||||| || ||||||||| ||||||| || ||          ||||||| |||||||||  |||||||    
T  379142 agaaaaacaatctcaataaatctcatcttttcatgaacgattttttcttgttaaaattacacta----------caaaatctatcaaaatccaatttatt 379053  T
Q  257 aaacaatcatttgaaatttgaatgattttgaatacca 293  Q
    |||||||| ||  ||||||||||||||||||||||||    
T  379052 aaacaatccttcaaaatttgaatgattttgaatacca 379016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 315 - 384
Target Start/End: Complemental strand, 20605209 - 20605140
Alignment:
Q  315 aagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagactcttgattgaataccacaagact 384  Q
    |||||||||||||||||||||||||||       |||||||||||| ||||||||||||| |||||||||    
T  20605209 aagagtcttgattgaataccacaagactttttttaaatgacaaagaatcttgattgaataacacaagact 20605140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 157 - 228
Target Start/End: Original strand, 6224562 - 6224633
Alignment:
Q  157 agaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcc 228  Q
    |||||||||||   |||||||||||| ||||||||||||||||||||||| ||||||| || || |||||||    
T  6224562 agaaaaacaatatcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcc 6224633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 241 - 384
Target Start/End: Original strand, 6224626 - 6224770
Alignment:
Q  241 caaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagac-nnnnnnnaagtgattaagagtcttgattgaataccacaag 339  Q
    |||||||  |||||||||| |||| || ||||||||||| |||||||||||||| ||||        ||||||| || | ||||||||||||||| ||||    
T  6224626 caaaatccaatttattaaataatccttcgaaatttgaataattttgaataccacaagactttttttaaagtgatgaaaaatcttgattgaatacctcaag 6224725  T
Q  340 acnnnnnnnaaatgacaaagactcttgattgaataccacaagact 384  Q
    ||       |||||||||||| |||||||| ||||||||| ||||    
T  6224726 acttttttaaaatgacaaagagtcttgattaaataccacatgact 6224770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 157 - 228
Target Start/End: Original strand, 215233 - 215303
Alignment:
Q  157 agaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcc 228  Q
    ||||||||||||  | |||||||||| |||||||||||||||||||| || ||||||| || || |||||||    
T  215233 agaaaaacaatctcatgaaatctcatcttttcatgaaagactttttc-tgttaaaattacactacaaaatcc 215303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 159 - 206
Target Start/End: Complemental strand, 7027100 - 7027053
Alignment:
Q  159 aaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttg 206  Q
    ||||||||||  |||||||||||| ||||||||||||| |||||||||    
T  7027100 aaaaacaatctcaagaaatctcatcttttcatgaaagattttttcttg 7027053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 315 - 384
Target Start/End: Complemental strand, 24776370 - 24776301
Alignment:
Q  315 aagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagactcttgattgaataccacaagact 384  Q
    |||| ||||||||||||| ||||||||       |||| | ||||| |||||||||||||||||||||||    
T  24776370 aagaatcttgattgaataacacaagactttttttaaattagaaagagtcttgattgaataccacaagact 24776301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 171; Significance: 1e-91; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 140 - 384
Target Start/End: Original strand, 2704794 - 2705038
Alignment:
Q  140 tagtaaaatcttaaaagagaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatcca 239  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||| |||||||||||||||||||||    
T  2704794 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatatcactagaaaatcccacaaaatcca 2704893  T
Q  240 tcaaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 339  Q
    ||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||    
T  2704894 tcaaaatttgatttattaaacaatcattcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaag 2704993  T
Q  340 acnnnnnnnaaatgacaaagactcttgattgaataccacaagact 384  Q
    ||       |||||||||||| ||||||||||||| |||||||||    
T  2704994 actttttttaaatgacaaagaatcttgattgaataacacaagact 2705038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 140 - 384
Target Start/End: Original strand, 24501788 - 24502032
Alignment:
Q  140 tagtaaaatcttaaaagagaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatcca 239  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  24501788 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 24501887  T
Q  240 tcaaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 339  Q
    ||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||    
T  24501888 tcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaag 24501987  T
Q  340 acnnnnnnnaaatgacaaagactcttgattgaataccacaagact 384  Q
    ||       |||||| ||||| ||||||||||||| |||||||||    
T  24501988 actttttttaaatgataaagaatcttgattgaataacacaagact 24502032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 143 - 384
Target Start/End: Original strand, 42938095 - 42938336
Alignment:
Q  143 taaaatcttaaaagagaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatca 242  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||| ||||||||||||||||||||||||    
T  42938095 taaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcaggctaaaatttcactagaaaatcccacaaaatccatca 42938194  T
Q  243 aaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacn 342  Q
    |||||||||||||||||||||| || |||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||     
T  42938195 aaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaagact 42938294  T
Q  343 nnnnnnaaatgacaaagactcttgattgaataccacaagact 384  Q
          |||||||||| | ||||||||||||| |||||||||    
T  42938295 ttttttaaatgacaaataatcttgattgaataacacaagact 42938336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 163; E-Value: 6e-87
Query Start/End: Original strand, 140 - 380
Target Start/End: Original strand, 26374405 - 26374645
Alignment:
Q  140 tagtaaaatcttaaaagagaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatcca 239  Q
    ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  26374405 tagtaaaattttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 26374504  T
Q  240 tcaaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 339  Q
    ||||||||| ||||||||||||||| || |||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||    
T  26374505 tcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaag 26374604  T
Q  340 acnnnnnnnaaatgacaaagactcttgattgaataccacaa 380  Q
    ||       |||||||||||| ||||||||||||| |||||    
T  26374605 actttttttaaatgacaaagaatcttgattgaataacacaa 26374645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 140 - 384
Target Start/End: Complemental strand, 42937582 - 42937340
Alignment:
Q  140 tagtaaaatcttaaaagagaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatcca 239  Q
    |||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||  ||||||||||||| |||||||||||||||||||||    
T  42937582 tagtaaaatcttaaaagaaaaaaacaatcataagaaatctcatgttttcatgaaagactttttaatgctaaaatttcactagaaaatcccacaaaatcca 42937483  T
Q  240 tcaaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 339  Q
    ||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||       |||||||||||||||  ||||||||||||||||    
T  42937482 tcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtc--gattgaataccacaag 42937385  T
Q  340 acnnnnnnnaaatgacaaagactcttgattgaataccacaagact 384  Q
    ||       |||||||||| | ||||||||||||| |||||||||    
T  42937384 actttttttaaatgacaaaaaatcttgattgaataacacaagact 42937340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 151; E-Value: 8e-80
Query Start/End: Original strand, 140 - 380
Target Start/End: Original strand, 7506874 - 7507114
Alignment:
Q  140 tagtaaaatcttaaaagagaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatcca 239  Q
    |||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  7506874 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgtttacatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 7506973  T
Q  240 tcaaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 339  Q
    ||||||||||||||||||||||||| ||  ||||||||||| ||||||||||||||||||       |||||||||||||||||||||||||||||||||    
T  7506974 tcaaaatctgatttattaaacaatccttcaaaatttgaatggttttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaag 7507073  T
Q  340 acnnnnnnnaaatgacaaagactcttgattgaataccacaa 380  Q
    ||       ||||||||| || ||| ||||||||| |||||    
T  7507074 acttttcttaaatgacaaggaatctcgattgaataacacaa 7507114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 151; E-Value: 8e-80
Query Start/End: Original strand, 140 - 384
Target Start/End: Original strand, 42735252 - 42735496
Alignment:
Q  140 tagtaaaatcttaaaagagaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatcca 239  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||  |||||||||||| |||||||||||||||||||||    
T  42735252 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgtttttatgaaagactttttcaagctaaaatttcactagaaaatcccacaaaatcca 42735351  T
Q  240 tcaaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 339  Q
    ||||||||||||||||||||||||  || |||||||||||||||||||||||||||||||       ||||||||||||||||| |||||||||||||||    
T  42735352 tcaaaatctgatttattaaacaatacttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttaattgaataccacaag 42735451  T
Q  340 acnnnnnnnaaatgacaaagactcttgattgaataccacaagact 384  Q
     |       |||||| ||||| ||||||||||||| |||||||||    
T  42735452 tctttttttaaatgataaagaatcttgattgaataacacaagact 42735496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 140 - 384
Target Start/End: Original strand, 5576595 - 5576840
Alignment:
Q  140 tagtaaaatcttaaaagagaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatcca 239  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| |||||||||||||||||||||    
T  5576595 tagtaaaatcttaaaaggaaaaaacaatcctaagaaatctcatgttttcataaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 5576694  T
Q  240 tcaaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagac-nnnnnnnaagtgattaagagtcttgattgaataccacaa 338  Q
    |||||||||| |||||||||||||  || ||||||||||||||||||||||||||| |||        ||||||||||||||||||||||||||||||||    
T  5576695 tcaaaatctggtttattaaacaattcttcgaaatttgaatgattttgaataccacttgacttttttttaagtgattaagagtcttgattgaataccacaa 5576794  T
Q  339 gacnnnnnnnaaatgacaaagactcttgattgaataccacaagact 384  Q
    |||       |||||||||||| ||||||||||||| |||||||||    
T  5576795 gactttttttaaatgacaaagaatcttgattgaataacacaagact 5576840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 147 - 384
Target Start/End: Original strand, 23115152 - 23115387
Alignment:
Q  147 atcttaaaagagaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaat 246  Q
    ||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||    
T  23115152 atcttaaaaga-aaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcattagaaaatcccacaaaatccatcaaaat 23115250  T
Q  247 ctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnn 346  Q
    |||||||||||||||||| ||  |||||||||||| |||||||||||||||||       |||||||||||||||||||||||||||||||||||         
T  23115251 ctgatttattaaacaatccttccaaatttgaatga-tttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaagacatttt 23115349  T
Q  347 nnaaatgacaaagactcttgattgaataccacaagact 384  Q
      |||||||||||| ||||||||||||| |||||||||    
T  23115350 ttaaatgacaaagaatcttgattgaataacacaagact 23115387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 144 - 374
Target Start/End: Original strand, 10392217 - 10392446
Alignment:
Q  144 aaaatcttaaaagagaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaa 243  Q
    |||||||||||||| ||||| |||||||| ||||||||||||||||||||||| |||||| ||||||||||||| |||||||||||||||||||||||||    
T  10392217 aaaatcttaaaagaaaaaaa-aatcctaataaatctcatgttttcatgaaagattttttcatgctaaaatttcactagaaaatcccacaaaatccatcaa 10392315  T
Q  244 aatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnn 343  Q
    ||||||||||||||||||||| || ||||||||||||||| |||||||||||||||       |||||||||| ||||||||||||||| |||||||       
T  10392316 aatctgatttattaaacaatccttcgaaatttgaatgattctgaataccactagacttttcttaagtgattaaaagtcttgattgaatatcacaagaatt 10392415  T
Q  344 nnnnnaaatgacaaagactcttgattgaata 374  Q
         |||||||||||| |||||||||||||    
T  10392416 ttttaaaatgacaaagaatcttgattgaata 10392446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 140 - 380
Target Start/End: Complemental strand, 41479318 - 41479088
Alignment:
Q  140 tagtaaaatcttaaaagagaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatcca 239  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| ||||||||||| | |||||||||||||||||||      
T  41479318 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagattttttcatgctaaaattttactagaaaatcccacaaaatc-- 41479221  T
Q  240 tcaaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 339  Q
            |||||||||||||||||||| ||||||||||||||||||||||||| |||||       |||||||||||||||||||||||||||||||||    
T  41479220 --------tgatttattaaacaatcattcgaaatttgaatgattttgaataccattagactttttttaagtgattaagagtcttgattgaataccacaag 41479129  T
Q  340 acnnnnnnnaaatgacaaagactcttgattgaataccacaa 380  Q
    ||       |||||||||||| ||||||||||||| |||||    
T  41479128 actttttttaaatgacaaagaatcttgattgaataacacaa 41479088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 140 - 384
Target Start/End: Complemental strand, 43959878 - 43959645
Alignment:
Q  140 tagtaaaatcttaaaagagaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatcca 239  Q
    |||||||||||||||||| |||||||||| |||||||||||||||||| || |||||||||||| |||||||||||||          ||||||||||||    
T  43959878 tagtaaaatcttaaaagaaaaaaacaatcataagaaatctcatgttttaattaaagactttttcatgctaaaatttca----------ccacaaaatcca 43959789  T
Q  240 tcaaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 339  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |       |||||||||||| ||||||||||||| ||||||    
T  43959788 tcaaaatctgatttattaaacaatcattcgaaatttgaatgattttgaataccactagtcttttttgaagtgattaagaatcttgattgaata-cacaag 43959690  T
Q  340 acnnnnnnnaaatgacaaagactcttgattgaataccacaagact 384  Q
    ||       |||||||||||| ||||||||||||| |||||||||    
T  43959689 acttttttaaaatgacaaagaatcttgattgaataacacaagact 43959645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 159 - 384
Target Start/End: Original strand, 14782129 - 14782354
Alignment:
Q  159 aaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttattaa 258  Q
    ||||||||||  |||||||||||| ||||||||||||||||||||||| ||||||| || || ||||||||||||||||||||||||||  |||||||||    
T  14782129 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaa 14782228  T
Q  259 acaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaa 358  Q
    |||||| ||  ||||||||||||||||||||||||| ||||       || |||| || ||||||||||||||||| ||||||       ||||||||||    
T  14782229 acaatccttcaaaatttgaatgattttgaataccacaagactttttttaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaa 14782328  T
Q  359 gactcttgattgaataccacaagact 384  Q
    || |||||||||||||||||||||||    
T  14782329 gagtcttgattgaataccacaagact 14782354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 159 - 384
Target Start/End: Original strand, 44725804 - 44726029
Alignment:
Q  159 aaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttattaa 258  Q
    ||||||||||  |||||||||||| ||||||||||||||||||||||| ||||||| || || ||||||||||||||||||||||||||  |||||||||    
T  44725804 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaa 44725903  T
Q  259 acaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaa 358  Q
    |||||| ||  ||||||||||||||||||||||||| ||||       || |||| || ||||||||||||||||| ||||||       ||||||||||    
T  44725904 acaatccttcaaaatttgaatgattttgaataccacaagactttttttaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaa 44726003  T
Q  359 gactcttgattgaataccacaagact 384  Q
    || |||||||||||||||||||||||    
T  44726004 gagtcttgattgaataccacaagact 44726029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 157 - 384
Target Start/End: Original strand, 9288449 - 9288676
Alignment:
Q  157 agaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttatt 256  Q
    ||||||||||||  |||||||||||| ||||||||||||||||||||||| ||||||| || || ||||||||||||||| ||||||||||  |||||||    
T  9288449 agaaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaattcatcaaaatccaatttatt 9288548  T
Q  257 aaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgaca 356  Q
    |||||||| || |||||||||||||||||||||||||| ||||       ||||||| || | | ||||||||||||| ||||||       ||||||||    
T  9288549 aaacaatccttcgaaatttgaatgattttgaataccacaagactttttttaagtgatgaaaatttttgattgaatacctcaagacttttttaaaatgaca 9288648  T
Q  357 aagactcttgattgaataccacaagact 384  Q
    |||| ||||||||||||| |||||||||    
T  9288649 aagagtcttgattgaatatcacaagact 9288676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 159 - 384
Target Start/End: Original strand, 19717875 - 19718100
Alignment:
Q  159 aaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttattaa 258  Q
    ||||||||||  |||||||||||| ||||||| ||||||||||||||| ||||||| || || ||||||||||||||||||| ||||||  |||||||||    
T  19717875 aaaaacaatctcaagaaatctcatcttttcataaaagactttttcttgttaaaattacactacaaaatcccacaaaatccattaaaatccaatttattaa 19717974  T
Q  259 acaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaa 358  Q
    |||||  || |||||||||||||||||||||||||| ||||       || |||| || ||||||||||||||||| ||||||       ||||||||||    
T  19717975 acaattcttcgaaatttgaatgattttgaataccacaagactttttttaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaa 19718074  T
Q  359 gactcttgattgaataccacaagact 384  Q
    || |||||||||||||||||||||||    
T  19718075 gagtcttgattgaataccacaagact 19718100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 157 - 384
Target Start/End: Original strand, 39467460 - 39467687
Alignment:
Q  157 agaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttatt 256  Q
    ||||||||||||  || ||||||||| ||||||||||||| ||||||||| ||||||| || || ||||||||| |||||||||||||||   |||||||    
T  39467460 agaaaaacaatctcaaaaaatctcatcttttcatgaaagattttttcttgttaaaattacactacaaaatcccataaaatccatcaaaattcaatttatt 39467559  T
Q  257 aaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgaca 356  Q
    |||||||| || |||||||||||||||||||||||||| ||||       || |||| || ||||||||||||||||| ||||||       ||||||||    
T  39467560 aaacaatccttcgaaatttgaatgattttgaataccacaagactttttttaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgaca 39467659  T
Q  357 aagactcttgattgaataccacaagact 384  Q
    |||| |||||||||||||||||||||||    
T  39467660 aagagtcttgattgaataccacaagact 39467687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 159 - 384
Target Start/End: Original strand, 18958721 - 18958946
Alignment:
Q  159 aaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttattaa 258  Q
    ||||||||||  || |||||| || ||||||||||||||||||||||| ||||||| || || ||||||||||||||||||| ||||||  |||||||||    
T  18958721 aaaaacaatctcaaaaaatctaatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccattaaaatccaatttattaa 18958820  T
Q  259 acaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaa 358  Q
    |||||| || |||||||||||||||||||||||||| ||||       || |||| || ||||||||||||||||| ||||||       |||||| |||    
T  18958821 acaatccttcgaaatttgaatgattttgaataccacaagactttttttaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgataaa 18958920  T
Q  359 gactcttgattgaataccacaagact 384  Q
    || |||||||||||||||||||||||    
T  18958921 gagtcttgattgaataccacaagact 18958946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 157 - 384
Target Start/End: Original strand, 43166682 - 43166909
Alignment:
Q  157 agaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttatt 256  Q
    |||||| |||||  |||||||||||| ||||||||||| ||||||||||| ||||||| ||  | ||||||||||||||||||||||||||  |||||||    
T  43166682 agaaaaccaatctcaagaaatctcatcttttcatgaaaaactttttcttgttaaaattacacaacaaaatcccacaaaatccatcaaaatccaatttatt 43166781  T
Q  257 aaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgaca 356  Q
    |||||||| || |||||||||||||||||||||||||| ||||       || |||  |||||||||||||||||||||||||||       ||||  ||    
T  43166782 aaacaatccttcgaaatttgaatgattttgaataccacaagacttttttaaaatgacaaagagtcttgattgaataccacaagactttttttaaattgca 43166881  T
Q  357 aagactcttgattgaataccacaagact 384  Q
    || | |||||||||||||||||||||||    
T  43166882 aaaagtcttgattgaataccacaagact 43166909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 159 - 384
Target Start/End: Original strand, 10295374 - 10295600
Alignment:
Q  159 aaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccac-aaaatccatcaaaatctgatttatta 257  Q
    ||||||||||  |||||||||||| ||||||||||||||||||||||| ||||||| || || |||||||||| ||||||||||||||||  ||||||||    
T  10295374 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaaatccatcaaaatccaatttatta 10295473  T
Q  258 aacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaa 357  Q
    ||||||| || |||||||||||||||||||||||||| ||||       ||||||| || ||||||||||||||||| ||||||       || |||| |    
T  10295474 aacaatccttcgaaatttgaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattgaatacctcaagactttttttaagtgacga 10295573  T
Q  358 agactcttgattgaataccacaagact 384  Q
    ||| |||||||||||| ||| ||||||    
T  10295574 agagtcttgattgaatgccagaagact 10295600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 157 - 380
Target Start/End: Complemental strand, 26856281 - 26856057
Alignment:
Q  157 agaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttatt 256  Q
    ||||||||||||  ||||||||| || ||||  ||||||||||||||||| ||||||| || || ||||||||||||||||||||||||||  |||||||    
T  26856281 agaaaaacaatctcaagaaatcttatttttttctgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttatt 26856182  T
Q  257 aaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccac-aagacnnnnnnnaaatgac 355  Q
    |||||||  || |||||||||||||||||||||||||| ||||       ||||||| || ||||||||||||||||| | |||||       |||||||    
T  26856181 aaacaatacttcgaaatttgaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattgaatacctcaaagacttttttaaaatgac 26856082  T
Q  356 aaagactcttgattgaataccacaa 380  Q
    ||||| |||||||||||||||||||    
T  26856081 aaagagtcttgattgaataccacaa 26856057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 157 - 294
Target Start/End: Complemental strand, 4403321 - 4403184
Alignment:
Q  157 agaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttatt 256  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||||||| ||||||| || || |||||||||||||||||||||||| |  |||||||    
T  4403321 agaaaaacaatcccaagaaatctcatattttcatgaaagactttttcttgttaaaattacactaaaaaatcccacaaaatccatcaaaacccaatttatt 4403222  T
Q  257 aaacaatcatttgaaatttgaatgattttgaataccac 294  Q
    |||||||| || ||||||||||||||||||||||||||    
T  4403221 aaacaatccttcgaaatttgaatgattttgaataccac 4403184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 157 - 382
Target Start/End: Complemental strand, 32497729 - 32497514
Alignment:
Q  157 agaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttatt 256  Q
    ||||||||||||  |||||||||||| ||||||||||||||||| ||||| ||||||| || || ||||||||||||||||||          |||||||    
T  32497729 agaaaaacaatctcaagaaatctcatcttttcatgaaagactttctcttgttaaaattacactacaaaatcccacaaaatcca----------atttatt 32497640  T
Q  257 aaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgaca 356  Q
    ||||||||||| |||||||||||||||||||||||||| ||||       ||||||| || ||||||||||||||||| ||||||       ||||||||    
T  32497639 aaacaatcattcgaaatttgaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattgaatacctcaagacttttttaaaatgaca 32497540  T
Q  357 aagactcttgattgaataccacaaga 382  Q
    |||| | |||||||||||||||||||    
T  32497539 aagagtattgattgaataccacaaga 32497514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 157 - 384
Target Start/End: Original strand, 18305963 - 18306180
Alignment:
Q  157 agaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttatt 256  Q
    |||| |||||||  |||||||||||| ||||||||||||||||||||||| ||||||| || || ||||||||||||||||||          |||||||    
T  18305963 agaataacaatctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatcca----------atttatt 18306052  T
Q  257 aaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgaca 356  Q
    |||||||| || |||||||||||||||||||||||||| ||||       || |||| || ||||||||||||||||| ||||||       ||||||||    
T  18306053 aaacaatctttcgaaatttgaatgattttgaataccacaagactttttttaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgaca 18306152  T
Q  357 aagactcttgattgaataccacaagact 384  Q
    |||| |||||||||||||||||||||||    
T  18306153 aagagtcttgattgaataccacaagact 18306180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 157 - 384
Target Start/End: Complemental strand, 7466539 - 7466322
Alignment:
Q  157 agaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttatt 256  Q
    ||||||||||||  |||||||||||| ||||||||||||||||||||||| ||||||| || || ||||||||||||||||||          |||||||    
T  7466539 agaaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatcca----------atttatt 7466450  T
Q  257 aaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgaca 356  Q
    |||||||  ||  ||||||||||||||||||||||||| ||||       ||| ||| || ||||||||||||||||| ||||||       ||||||||    
T  7466449 aaacaattcttcaaaatttgaatgattttgaataccacaagactttttttaagcgatgaaaagtcttgattgaatacctcaagacttttttaaaatgaca 7466350  T
Q  357 aagactcttgattgaataccacaagact 384  Q
    |||| |||||||||||||||||||||||    
T  7466349 aagagtcttgattgaataccacaagact 7466322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 143 - 292
Target Start/End: Original strand, 4949995 - 4950143
Alignment:
Q  143 taaaatcttaaaagagaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatca 242  Q
    |||||| |||||||| |||||||||  |||||||||| |||||| ||||||| | |||||| ||||||||||||| |||||||| ||||||| |||||||    
T  4949995 taaaattttaaaaga-aaaaacaattttaagaaatcttatgtttgcatgaaatattttttcatgctaaaatttcactagaaaattccacaaattccatca 4950093  T
Q  243 aaatctgatttattaaacaatcatttgaaatttgaatgattttgaatacc 292  Q
    |||||| |||||||||| |||| ||||||| |||||||||||||||||||    
T  4950094 aaatctaatttattaaataatcttttgaaacttgaatgattttgaatacc 4950143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 241 - 384
Target Start/End: Original strand, 32711358 - 32711501
Alignment:
Q  241 caaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaaga 340  Q
    |||||||||||||||||||||||| || ||||||| |||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||    
T  32711358 caaaatctgatttattaaacaatccttcgaaatttaaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaaga 32711457  T
Q  341 cnnnnnnnaaatgacaaagactcttgattgaataccacaagact 384  Q
    |       |||||||||||| ||||||||||||| |||||||||    
T  32711458 ctttttttaaatgacaaagaatcttgattgaataacacaagact 32711501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 157 - 380
Target Start/End: Original strand, 39189808 - 39190028
Alignment:
Q  157 agaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttatt 256  Q
    ||||||||||||| |||||||||||||||||||||||||| ||||||||| |||||||| | |||||||| |  |||||||||||||| ||  |||||||    
T  39189808 agaaaaacaatcccaagaaatctcatgttttcatgaaagattttttcttgttaaaattt-actagaaaattcatcaaaatccatcaaattc-aatttatt 39189905  T
Q  257 aaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgaca 356  Q
    |||||||| || |||||||||||||| ||||||| ||  ||||       || |||| |||||| || |||||||||||||||||       ||||  ||    
T  39189906 aaacaatccttcgaaatttgaatgatgttgaata-catgagactttttttaaatgataaagagtttttattgaataccacaagactttttttaaattgca 39190004  T
Q  357 aagactcttgattgaataccacaa 380  Q
    |||| |||||||||||||||||||    
T  39190005 aagagtcttgattgaataccacaa 39190028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 157 - 382
Target Start/End: Complemental strand, 16362400 - 16362185
Alignment:
Q  157 agaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttatt 256  Q
    ||||||||||||  |||||||||||| |||| || ||||| ||||||||| ||||||| || ||          |||||||||||||||||  |||||||    
T  16362400 agaaaaacaatctcaagaaatctcatctttttataaaagattttttcttgttaaaattacacta----------caaaatccatcaaaatccaatttatt 16362311  T
Q  257 aaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgaca 356  Q
    |||||||| || |||||||||||||||||||||||||| ||||       |||| || || ||||||||||||||||| ||||||       ||||||||    
T  16362310 aaacaatccttcgaaatttgaatgattttgaataccacgagactttttttaagtaatgaaaagtcttgattgaatacctcaagacttttttaaaatgaca 16362211  T
Q  357 aagactcttgattgaataccacaaga 382  Q
    |||| ||||||||||||| |||||||    
T  16362210 aagagtcttgattgaatatcacaaga 16362185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 159 - 384
Target Start/End: Original strand, 42305789 - 42306004
Alignment:
Q  159 aaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttattaa 258  Q
    ||||||||||  |||||||||||| |||||||||| |||||||||||| ||||||| ||          | ||||||||||| ||||||  ||| |||||    
T  42305789 aaaaacaatctcaagaaatctcattttttcatgaatgactttttcttgttaaaattaca----------ctacaaaatccattaaaatccaattgattaa 42305878  T
Q  259 acaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaa 358  Q
    |||||| || ||||||||||| |||||||||||||| |||        || |||| || ||||||||||||||||| ||||||       ||||||||||    
T  42305879 acaatccttcgaaatttgaattattttgaataccacaagattttttttaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaa 42305978  T
Q  359 gactcttgattgaataccacaagact 384  Q
    || |||||||||||||||||||||||    
T  42305979 gagtcttgattgaataccacaagact 42306004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 241 - 377
Target Start/End: Complemental strand, 31623825 - 31623689
Alignment:
Q  241 caaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaaga 340  Q
    |||||||  ||||||||||||||| || |||||||||||||||||||||||||| ||||       ||||||| || ||||||||||||||||| |||||    
T  31623825 caaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattgaatacctcaaga 31623726  T
Q  341 cnnnnnnnaaatgacaaagactcttgattgaatacca 377  Q
    |       |||||||||||| ||||||||||||||||    
T  31623725 cttttttaaaatgacaaagagtcttgattgaatacca 31623689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 241 - 384
Target Start/End: Original strand, 4031334 - 4031477
Alignment:
Q  241 caaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaaga 340  Q
    |||||||  ||||||||||||||| || |||||||||||||||||||||||||| ||||       || | || || ||||||||||||||||| |||||    
T  4031334 caaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagactttttttaatttatgaaaagtcttgattgaatacctcaaga 4031433  T
Q  341 cnnnnnnnaaatgacaaagactcttgattgaataccacaagact 384  Q
    |       |||||||||||| |||||||||||||||||||||||    
T  4031434 cttttttaaaatgacaaagattcttgattgaataccacaagact 4031477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 157 - 299
Target Start/End: Complemental strand, 37857323 - 37857191
Alignment:
Q  157 agaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttatt 256  Q
    ||||||||||||  |||||||||||| ||||||||||||| ||||||||| | ||||| || ||          |||||||||||||||||  |||||||    
T  37857323 agaaaaacaatctcaagaaatctcatcttttcatgaaagattttttcttgttcaaattacacta----------caaaatccatcaaaatccaatttatt 37857234  T
Q  257 aaacaatcatttgaaatttgaatgattttgaataccactagac 299  Q
    |||||||| ||| |||||||||||| |||||||||||| ||||    
T  37857233 aaacaatcctttaaaatttgaatgaatttgaataccacaagac 37857191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 140 - 291
Target Start/End: Original strand, 13478226 - 13478376
Alignment:
Q  140 tagtaaaatcttaaaagagaaaaacaatcctaagaaatctcatgtttt-catgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatcc 238  Q
    |||||||||||||||||| |||||   |  ||| |||||| ||||||| ||| ||||||||| || |||||||||||   || ||||||| |||||||||    
T  13478226 tagtaaaatcttaaaagaaaaaaag--ttataaaaaatcttatgtttttcataaaagactttatcatgctaaaatttagctaaaaaatcctacaaaatcc 13478323  T
Q  239 atcaaaatctgatttattaaacaatcatttgaaatttgaatgattttgaatac 291  Q
    | | |||||| ||||||||||||||| || ||||||| || ||||||||||||    
T  13478324 aacgaaatctaatttattaaacaatccttcgaaatttaaaagattttgaatac 13478376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 155 - 228
Target Start/End: Original strand, 9770430 - 9770503
Alignment:
Q  155 agagaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcc 228  Q
    |||||||| |||||||||||||||||||||||| |||||| | |||||  || |||||||||||||||||||||    
T  9770430 agagaaaagcaatcctaagaaatctcatgttttgatgaaatatttttttatgttaaaatttcattagaaaatcc 9770503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 185 - 293
Target Start/End: Original strand, 8410416 - 8410526
Alignment:
Q  185 tttcatgaaagactttttcttgctaaaatttcattagaaaa--tcccacaaaatccatcaaaatctgatttattaaacaatcatttgaaatttgaatgat 282  Q
    |||| ||||||||||| || | ||||||||||| || ||||  ||||||||||||||||||| ||  ||||| ||||||||| ||  |||||| ||||||    
T  8410416 tttcgtgaaagactttgtcatactaaaatttcactaaaaaaaatcccacaaaatccatcaaagtccaatttagtaaacaatccttccaaatttcaatgat 8410515  T
Q  283 tttgaatacca 293  Q
    |||||||||||    
T  8410516 tttgaatacca 8410526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 157 - 214
Target Start/End: Complemental strand, 31623889 - 31623832
Alignment:
Q  157 agaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatt 214  Q
    ||||||||||||  ||||||||| || ||||||||||| ||||||||||| |||||||    
T  31623889 agaaaaacaatctcaagaaatcttatcttttcatgaaaaactttttcttgttaaaatt 31623832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 176 - 217
Target Start/End: Original strand, 32711305 - 32711346
Alignment:
Q  176 atctcatgttttcatgaaagactttttcttgctaaaatttca 217  Q
    ||||| |||||||||||||||||||||| |||||||||||||    
T  32711305 atctcttgttttcatgaaagactttttcatgctaaaatttca 32711346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 250 - 294
Target Start/End: Complemental strand, 41070066 - 41070022
Alignment:
Q  250 atttattaaacaatcatttgaaatttgaatgattttgaataccac 294  Q
    |||||| |||||||||||||||||| |||||||||| ||||||||    
T  41070066 atttatcaaacaatcatttgaaattggaatgattttaaataccac 41070022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 171; Significance: 1e-91; HSPs: 66)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 140 - 380
Target Start/End: Complemental strand, 20498439 - 20498199
Alignment:
Q  140 tagtaaaatcttaaaagagaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatcca 239  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  20498439 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 20498340  T
Q  240 tcaaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 339  Q
    ||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||    
T  20498339 tcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaag 20498240  T
Q  340 acnnnnnnnaaatgacaaagactcttgattgaataccacaa 380  Q
    ||       |||||||||||| ||||||||||||| |||||    
T  20498239 actttttttaaatgacaaagaatcttgattgaataacacaa 20498199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 140 - 384
Target Start/End: Original strand, 996062 - 996306
Alignment:
Q  140 tagtaaaatcttaaaagagaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatcca 239  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  996062 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 996161  T
Q  240 tcaaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 339  Q
    ||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||       |||||||||||| ||||||||||||||||||||    
T  996162 tcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagaatcttgattgaataccacaag 996261  T
Q  340 acnnnnnnnaaatgacaaagactcttgattgaataccacaagact 384  Q
    ||       |||||| ||||| ||||||||||||| |||||||||    
T  996262 acttttttgaaatgataaagaatcttgattgaataacacaagact 996306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 140 - 384
Target Start/End: Original strand, 10139122 - 10139366
Alignment:
Q  140 tagtaaaatcttaaaagagaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatcca 239  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  10139122 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 10139221  T
Q  240 tcaaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 339  Q
    ||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||    
T  10139222 tcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaag 10139321  T
Q  340 acnnnnnnnaaatgacaaagactcttgattgaataccacaagact 384  Q
    ||       |||||| || || ||||||||||||| |||||||||    
T  10139322 actttttttaaatgataaggaatcttgattgaataacacaagact 10139366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 140 - 384
Target Start/End: Complemental strand, 19254057 - 19253813
Alignment:
Q  140 tagtaaaatcttaaaagagaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatcca 239  Q
    ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  19254057 tagtaaaattttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 19253958  T
Q  240 tcaaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 339  Q
    ||||||||| ||||||||||||||| || |||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||    
T  19253957 tcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaag 19253858  T
Q  340 acnnnnnnnaaatgacaaagactcttgattgaataccacaagact 384  Q
    ||       |||||||||||| ||||||||||||| |||||||||    
T  19253857 actttttttaaatgacaaagaatcttgattgaataacacaagact 19253813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 161; E-Value: 9e-86
Query Start/End: Original strand, 140 - 341
Target Start/End: Original strand, 3206181 - 3206382
Alignment:
Q  140 tagtaaaatcttaaaagagaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatcca 239  Q
    |||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  3206181 tagtaaaatcttaaaagaaaaaaacaatcataagaaatctcatgttttcatgaaagactttttcttgctaaaatttcactagaaaatcccacaaaatcca 3206280  T
Q  240 tcaaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 339  Q
    ||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||    
T  3206281 tcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaag 3206380  T
Q  340 ac 341  Q
    ||    
T  3206381 ac 3206382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 143 - 384
Target Start/End: Original strand, 3999624 - 3999865
Alignment:
Q  143 taaaatcttaaaagagaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatca 242  Q
    ||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| | ||||||||||| ||||||||||||||||||||||||    
T  3999624 taaaatcttaaaagaaaaaaacaatcctaagaaatctcatgtttttatgaaagactttttcattctaaaatttcactagaaaatcccacaaaatccatca 3999723  T
Q  243 aaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacn 342  Q
    |||||||||||||||||||||| || ||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||     
T  3999724 aaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagattttttttaagtgattaagagtcttgattgaataccacaagact 3999823  T
Q  343 nnnnnnaaatgacaaagactcttgattgaataccacaagact 384  Q
          |||||||||||| ||||||||||||| |||||||||    
T  3999824 ttttttaaatgacaaagaatcttgattgaataacacaagact 3999865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 140 - 384
Target Start/End: Original strand, 37820453 - 37820697
Alignment:
Q  140 tagtaaaatcttaaaagagaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatcca 239  Q
    |||||||||||||||||| |||||||||| |||||||||||||||||| ||||||||||||||| ||||||||||||| | |||||||||||||||||||    
T  37820453 tagtaaaatcttaaaagaaaaaaacaatcttaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactggaaaatcccacaaaatcca 37820552  T
Q  240 tcaaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 339  Q
    ||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||       |||||||||||| ||||||||||||||||||||    
T  37820553 tcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagaatcttgattgaataccacaag 37820652  T
Q  340 acnnnnnnnaaatgacaaagactcttgattgaataccacaagact 384  Q
    |        |||||||||||| ||||||||||||| |||||||||    
T  37820653 aatttttttaaatgacaaagaatcttgattgaataacacaagact 37820697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 140 - 384
Target Start/End: Complemental strand, 6589795 - 6589550
Alignment:
Q  140 tagtaaaatcttaaaa-gagaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatcc 238  Q
    |||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  6589795 tagtaaaatcttaaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcc 6589696  T
Q  239 atcaaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaa 338  Q
    ||||||||||||||||||||| |||  || |||||||||||||||||||||||||||||||       || |||||||||||||||||||||||||||||    
T  6589695 atcaaaatctgatttattaaataattcttcgaaatttgaatgattttgaataccactagactttttttaaatgattaagagtcttgattgaataccacaa 6589596  T
Q  339 gacnnnnnnnaaatgacaaagactcttgattgaataccacaagact 384  Q
    |||       ||||||||| || | ||||||||||| |||||||||    
T  6589595 gactttttttaaatgacaaggaatattgattgaataacacaagact 6589550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 140 - 384
Target Start/End: Original strand, 29448833 - 29449078
Alignment:
Q  140 tagtaaaatcttaaaa-gagaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatcc 238  Q
    |||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| | ||||||||||||||||||||    
T  29448833 tagtaaaatcttaaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatcc 29448932  T
Q  239 atcaaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaa 338  Q
    |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||       |||||||| ||||||||||||||||| |||||    
T  29448933 atcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattgagagtcttgattgaatatcacaa 29449032  T
Q  339 gacnnnnnnnaaatgacaaagactcttgattgaataccacaagact 384  Q
    |||       ||||||||| || ||||||||||||| |||||||||    
T  29449033 gactttttgtaaatgacaaggaatcttgattgaataacacaagact 29449078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 140 - 384
Target Start/End: Complemental strand, 25418595 - 25418352
Alignment:
Q  140 tagtaaaatcttaaaagagaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatcca 239  Q
    |||||||||||||||||| ||||||||||||||| |||||||||||||||||||| |||||||| ||| ||||||||| |||||||||||||||||||||    
T  25418595 tagtaaaatcttaaaaga-aaaaacaatcctaaggaatctcatgttttcatgaaatactttttcatgccaaaatttcactagaaaatcccacaaaatcca 25418497  T
Q  240 tcaaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 339  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||||||||||| |||||        |||||||||| ||||||||||||||||||||||    
T  25418496 tcaaaatctgatttattaaacaatcctttcaaatttgaatgattttgaataccgctagattttttgtaagtgattaaaagtcttgattgaataccacaag 25418397  T
Q  340 acnnnnnnnaaatgacaaagactcttgattgaataccacaagact 384  Q
    ||       |||||||||||| ||||||||||||| |||||||||    
T  25418396 actttttttaaatgacaaagaatcttgattgaataacacaagact 25418352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 140 - 384
Target Start/End: Complemental strand, 35337963 - 35337721
Alignment:
Q  140 tagtaaaatcttaaaagagaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatcca 239  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||||||||| |||||||| ||||||||||||| |||||||||||||||||||||    
T  35337963 tagtaaaatcttaaaagaaaaaaacaatcctaa-aaatctcatgttttcatgaaa-actttttcatgctaaaatttcactagaaaatcccacaaaatcca 35337866  T
Q  240 tcaaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 339  Q
    ||||||||||||||||||||||||| || |||||||||||  ||||||||||||||||||       |||||||||||||||||||||||||||||||||    
T  35337865 tcaaaatctgatttattaaacaatccttcgaaatttgaatttttttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaag 35337766  T
Q  340 acnnnnnnnaaatgacaaagactcttgattgaataccacaagact 384  Q
    ||       ||||||||| || ||||||||||||| |||||||||    
T  35337765 acttttttaaaatgacaaggaatcttgattgaataacacaagact 35337721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 162 - 384
Target Start/End: Original strand, 33807796 - 33808019
Alignment:
Q  162 aacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttattaaaca 261  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  33807796 aacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaaca 33807895  T
Q  262 atcatttgaaatttgaatgattttgaataccactagac-nnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaaga 360  Q
    ||| || |||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||       ||||||||||||    
T  33807896 atccttcgaaatttgaatgattttgaataccactagacttttttttaagtgattaagagtcttgattgaataccacaagactttttttaaatgacaaaga 33807995  T
Q  361 ctcttgattgaataccacaagact 384  Q
     |||| |||||||| |||||||||    
T  33807996 atcttaattgaataacacaagact 33808019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 140 - 382
Target Start/End: Complemental strand, 40247073 - 40246832
Alignment:
Q  140 tagtaaaatcttaaaagagaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatcca 239  Q
    |||||||||||||||||| |||||||||| |||| ||||||||||||||||||||||||||||| ||| ||||||||| |||||||||||||||||||||    
T  40247073 tagtaaaatcttaaaaga-aaaaacaatcataaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatcca 40246975  T
Q  240 tcaaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 339  Q
    ||||||||||||||||||||||||| ||  ||||||||||||||||||||||||||||||       || ||||||| |||||||||||||||||||||     
T  40246974 tcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagactttttttaactgattaatagtcttgattgaataccacaaa 40246875  T
Q  340 acnnnnnnnaaatgacaaagactcttgattgaataccacaaga 382  Q
    ||       |||||||||||| ||||||||||||| |||||||    
T  40246874 actttttttaaatgacaaagaatcttgattgaataacacaaga 40246832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 140 - 372
Target Start/End: Original strand, 53929104 - 53929336
Alignment:
Q  140 tagtaaaatcttaaaagagaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatcca 239  Q
    ||||||||| |||||||| |||||||||||||| ||||||||||||||||| ||||| |||||| ||||||||||||| |||||||||| ||||||||||    
T  53929104 tagtaaaattttaaaagaaaaaaacaatcctaaaaaatctcatgttttcattaaagattttttcatgctaaaatttcactagaaaatcctacaaaatcca 53929203  T
Q  240 tcaaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 339  Q
    ||||||||| ||||||||||||||| || || |||| |||||||||||||||||||||||       |||||||||||||||||||||||||||||||||    
T  53929204 tcaaaatcttatttattaaacaatcgttcgatatttaaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaag 53929303  T
Q  340 acnnnnnnnaaatgacaaagactcttgattgaa 372  Q
    ||       |||||||||||| |||||||||||    
T  53929304 actttttttaaatgacaaagaatcttgattgaa 53929336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 144 - 384
Target Start/End: Complemental strand, 54625818 - 54625578
Alignment:
Q  144 aaaatcttaaaagagaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaa 243  Q
    |||||||||||||  |||| ||||| ||||||||||||||||||||||||| |||||||| ||||||||||||| |||||||||||||||||||||||||    
T  54625818 aaaatcttaaaagcaaaaatcaatcttaagaaatctcatgttttcatgaaaaactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaa 54625719  T
Q  244 aatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnn 343  Q
    ||||||||||||||||||||| || ||||||||||| |||||||||||||||||||       ||||||||||||||||||||||||||| ||||||       
T  54625718 aatctgatttattaaacaatccttcgaaatttgaataattttgaataccactagactttttttaagtgattaagagtcttgattgaatacaacaagattt 54625619  T
Q  344 nnnnnaaatgacaaagactcttgattgaataccacaagact 384  Q
         ||||||||| || | ||||||||||| |||||||||    
T  54625618 tttttaaatgacaacgaatattgattgaataacacaagact 54625578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 140 - 384
Target Start/End: Original strand, 44762011 - 44762257
Alignment:
Q  140 tagtaaaatcttaaaag--agaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatc 237  Q
    ||||||||||||||||   | |||||||||| ||||||||||||||||||||| |||||||||||| ||||||||||||| || ||||||||||||||||    
T  44762011 tagtaaaatcttaaaaagaaaaaaaacaatcttaagaaatctcatgttttcataaaagactttttcatgctaaaatttcactaaaaaatcccacaaaatc 44762110  T
Q  238 catcaaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccaca 337  Q
    ||||||||||||||||||||||||||| || |||| |||||| ||||| |||||||||||||       ||||||||||||||||||||||||||| |||    
T  44762111 catcaaaatctgatttattaaacaatccttcgaaacttgaataattttaaataccactagactttttttaagtgattaagagtcttgattgaatactaca 44762210  T
Q  338 agacnnnnnnnaaatgacaaagactcttgattgaataccacaagact 384  Q
     |||       |||||||||||| ||||||||||||| |||||||||    
T  44762211 tgactttttttaaatgacaaagaatcttgattgaataacacaagact 44762257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 170 - 375
Target Start/End: Original strand, 33996547 - 33996752
Alignment:
Q  170 taagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcatttg 269  Q
    |||||||||||||||||| || |||||||||||| ||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| || |    
T  33996547 taagaaatctcatgtttttataaaagactttttcatgctaaaatttcactagaaaatccctcaaaatccatcaaaatctgatttattaaacaatccttcg 33996646  T
Q  270 aaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagactcttgatt 369  Q
    |||||||||||||||||||||||||| ||        |||||||||||||||||||||||||||||||||||       |||||||||||| ||||||||    
T  33996647 aaatttgaatgattttgaataccactggattttttttaagtgattaagagtcttgattgaataccacaagactttttttaaatgacaaagaatcttgatt 33996746  T
Q  370 gaatac 375  Q
    ||||||    
T  33996747 gaatac 33996752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 157 - 384
Target Start/End: Complemental strand, 17946501 - 17946274
Alignment:
Q  157 agaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttatt 256  Q
    ||||||||||||  |||||||||||| ||||||||||||||||||||||| ||||||| || || ||||||||||||||||||||||||||  |||||||    
T  17946501 agaaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttatt 17946402  T
Q  257 aaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgaca 356  Q
    |||||||| ||||||||||||||||||||||||| ||| ||||       ||||||| || ||||||||||||||||| ||||||       ||||||||    
T  17946401 aaacaatcctttgaaatttgaatgattttgaatatcacgagactttttttaagtgatgaaaagtcttgattgaatacctcaagacttttttaaaatgaca 17946302  T
Q  357 aagactcttgattgaataccacaagact 384  Q
    |||| |||||||||||||||||||||||    
T  17946301 aagaatcttgattgaataccacaagact 17946274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 140 - 382
Target Start/End: Complemental strand, 52114759 - 52114516
Alignment:
Q  140 tagtaaaatcttaaaagagaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatcca 239  Q
    |||||||||||||||||| ||||| |||||||||||||||||||||||||  ||||| |||||| ||||||||||| | |||||||| |||||||||| |    
T  52114759 tagtaaaatcttaaaagaaaaaaataatcctaagaaatctcatgttttcacaaaagattttttcatgctaaaattttactagaaaattccacaaaatcta 52114660  T
Q  240 tcaaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagac-nnnnnnnaagtgattaagagtcttgattgaataccacaa 338  Q
    ||||||||||||||||||||||||| |  ||||||||||| |||||||||||||||||||        |||||||||| |||||||||||||||||||||    
T  52114659 tcaaaatctgatttattaaacaatcctgcgaaatttgaattattttgaataccactagacttttttttaagtgattaaaagtcttgattgaataccacaa 52114560  T
Q  339 gacnnnnnnnaaatgacaaagactcttgattgaataccacaaga 382  Q
    |||       |||||||||||| ||||| ||||||| |||||||    
T  52114559 gactttttttaaatgacaaagaatcttggttgaataacacaaga 52114516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 140 - 377
Target Start/End: Original strand, 6035031 - 6035266
Alignment:
Q  140 tagtaaaatcttaaaagagaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatcca 239  Q
    ||||||||| ||||||||  ||||||||| |||||||||||||||||| ||||||||||||||| ||||||||||| | |||||||||||||||||||||    
T  6035031 tagtaaaattttaaaaga--aaaacaatcttaagaaatctcatgtttttatgaaagactttttcatgctaaaattttactagaaaatcccacaaaatcca 6035128  T
Q  240 tcaaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 339  Q
    ||||||||| |||||||||||| |  || |||||||||||||||||||||| ||| ||||       ||||||| || | ||||||||||||||| ||||    
T  6035129 tcaaaatctaatttattaaacattgcttcgaaatttgaatgattttgaatatcacgagactttttttaagtgatgaaaaatcttgattgaatacctcaag 6035228  T
Q  340 acnnnnnnnaaatgacaaagactcttgattgaatacca 377  Q
    ||       |||||||||||||||||||||||||||||    
T  6035229 acttttttaaaatgacaaagactcttgattgaatacca 6035266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 157 - 384
Target Start/End: Original strand, 44906506 - 44906733
Alignment:
Q  157 agaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttatt 256  Q
    ||||||||||||  |||||||||||| |||||||||||||| |||||||| ||||||| || || ||||||||||||||| ||||||||||  |||||||    
T  44906506 agaaaaacaatctcaagaaatctcatcttttcatgaaagacattttcttgttaaaattacactacaaaatcccacaaaattcatcaaaatccaatttatt 44906605  T
Q  257 aaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgaca 356  Q
    |||||||| || |||||||||||||||||||||||||| ||||       ||||||| || ||||||||||||||||| ||||||       ||||||||    
T  44906606 aaacaatccttcgaaatttgaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattgaatacctcaagacttttttaaaatgaca 44906705  T
Q  357 aagactcttgattgaataccacaagact 384  Q
    |||| |||||||||||||||||||||||    
T  44906706 aagagtcttgattgaataccacaagact 44906733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 159 - 384
Target Start/End: Original strand, 36674125 - 36674350
Alignment:
Q  159 aaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttattaa 258  Q
    ||||||||||  |||||||||||| ||||||||||||||||||||||| ||||||| || || ||||||||||||||||||||||||||  |||||||||    
T  36674125 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaa 36674224  T
Q  259 acaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaa 358  Q
    |||||| ||  ||||||||||||||||||||||||| ||||       || |||| || ||||||||||||||||| ||||||       ||||||||||    
T  36674225 acaatccttcaaaatttgaatgattttgaataccacaagactttttttaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaa 36674324  T
Q  359 gactcttgattgaataccacaagact 384  Q
    || |||||||||||||||||||||||    
T  36674325 gagtcttgattgaataccacaagact 36674350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 157 - 384
Target Start/End: Complemental strand, 40897357 - 40897130
Alignment:
Q  157 agaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttatt 256  Q
    |||||||||||   |||||||||||| ||||||||||||||||||||||| ||||||| || || ||||||||||||||||||||||||||  |||||||    
T  40897357 agaaaaacaatatcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactataaaatcccacaaaatccatcaaaatccaatttatt 40897258  T
Q  257 aaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgaca 356  Q
    |||||||| || |||||||||||||||||||||||||  ||||       ||||||| || ||||||||||||||||| ||||||       ||||||||    
T  40897257 aaacaatccttcgaaatttgaatgattttgaataccataagactttttttaagtgatgaaaagtcttgattgaatacctcaagacttttttaaaatgaca 40897158  T
Q  357 aagactcttgattgaataccacaagact 384  Q
    |||| |||||| ||||||||||||||||    
T  40897157 aagagtcttgaatgaataccacaagact 40897130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 159 - 384
Target Start/End: Original strand, 34484025 - 34484250
Alignment:
Q  159 aaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttattaa 258  Q
    ||||||||||  |||||||||||| ||||||||||||| ||||||||| ||||||| || || ||||||||||||||||||||||||||  |||||||||    
T  34484025 aaaaacaatctcaagaaatctcatcttttcatgaaagattttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaa 34484124  T
Q  259 acaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaa 358  Q
    |||||| || |||||||||||||||||||||||||| | ||       || |||| || ||||||||||||||||| ||||||       ||||||||||    
T  34484125 acaatccttcgaaatttgaatgattttgaataccacaaaactttttttaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaa 34484224  T
Q  359 gactcttgattgaataccacaagact 384  Q
    || |||||||||||||||||||||||    
T  34484225 gagtcttgattgaataccacaagact 34484250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 159 - 384
Target Start/End: Complemental strand, 11431737 - 11431512
Alignment:
Q  159 aaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttattaa 258  Q
    ||||||||||  |||||||||||| ||||||||||||||||||||||| ||||||| || || |||||||||||||||||| |||||||  |||||||||    
T  11431737 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccaccaaaatccaatttattaa 11431638  T
Q  259 acaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaa 358  Q
    |||||| || ||||||| |||||||||||||||||| ||||       || |||| || ||||||||||||||||| ||||||       ||||||||||    
T  11431637 acaatccttcgaaatttaaatgattttgaataccacaagactttttttaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaa 11431538  T
Q  359 gactcttgattgaataccacaagact 384  Q
    || |||| ||||||||||||||||||    
T  11431537 gagtctttattgaataccacaagact 11431512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 179 - 384
Target Start/End: Original strand, 51699495 - 51699699
Alignment:
Q  179 tcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcatttgaaatttgaa 278  Q
    ||||||||||| |||||| |||||| ||||||||||||| |||||||||||||||||| ||||||||||| ||||||||| ||||| || ||||||||||    
T  51699495 tcatgttttcacgaaagattttttcatgctaaaatttcactagaaaatcccacaaaattcatcaaaatcttatttattaaccaatccttcgaaatttgaa 51699594  T
Q  279 tgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagactcttgattgaataccac 378  Q
    ||||||||||||||||||||        ||||||||||||||||||||||||||||||||||        |||||||||||| |||||||||||||  ||    
T  51699595 tgattttgaataccactaga-tttttttaagtgattaagagtcttgattgaataccacaagattttttttaaatgacaaagaatcttgattgaataatac 51699693  T
Q  379 aagact 384  Q
    ||||||    
T  51699694 aagact 51699699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 157 - 384
Target Start/End: Complemental strand, 54629057 - 54628829
Alignment:
Q  157 agaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttatt 256  Q
    ||||||||||||  |||||||||||| |||| |||||||||||||||||| ||||||| || || ||||||||||||||||||||||||||  |||||||    
T  54629057 agaaaaacaatctcaagaaatctcatctttttatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttatt 54628958  T
Q  257 aaacaatcatttgaaatttgaatgattttgaataccactaga-cnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgac 355  Q
    |||||||| ||||||||||||||||||||||||||||| |||           ||||| || ||||||||||||||||| ||||||       |||||||    
T  54628957 aaacaatcctttgaaatttgaatgattttgaataccacaagatttttttttttgtgatgaaaagtcttgattgaatacctcaagacttttttaaaatgac 54628858  T
Q  356 aaagactcttgattgaataccacaagact 384  Q
    ||||| |||||||||||||||||||||||    
T  54628857 aaagagtcttgattgaataccacaagact 54628829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 172 - 384
Target Start/End: Complemental strand, 29030203 - 29029992
Alignment:
Q  172 agaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcatttgaa 271  Q
    ||||||||||||||||||| ||| |    ||| || ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||  ||    
T  29030203 agaaatctcatgttttcataaaaaaaaaattcatgttaaaatttcattagaaaattccacaaaatccatcaaaatctgatttattaaacaatccttcaaa 29030104  T
Q  272 atttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagactcttgattga 371  Q
    ||||||||||||||||||||||| ||||       |||||||||||||||||||||||||||||||||||       |||||||||||| |||| |||||    
T  29030103 atttgaatgattttgaataccacaagac-ttttttaagtgattaagagtcttgattgaataccacaagactttttttaaatgacaaagagtcttaattga 29030005  T
Q  372 ataccacaagact 384  Q
    ||| |||||||||    
T  29030004 ataacacaagact 29029992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 157 - 380
Target Start/End: Complemental strand, 52810591 - 52810368
Alignment:
Q  157 agaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttatt 256  Q
    ||||||||||||  |||||||||||| ||||||||||||| ||||||||| ||||||| |  || |||||||||||||||||||||||||   |||||||    
T  52810591 agaaaaacaatctcaagaaatctcatcttttcatgaaagattttttcttgttaaaattacgctacaaaatcccacaaaatccatcaaaattcaatttatt 52810492  T
Q  257 aaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgaca 356  Q
    |||||||||||  ||||||||||||||||||||||||| ||||       || |||| || ||||||||||||||||| ||| ||       ||||||||    
T  52810491 aaacaatcattcaaaatttgaatgattttgaataccacaagactttttttaaatgatgaaaagtcttgattgaatacctcaaaacttttttaaaatgaca 52810392  T
Q  357 aagactcttgattgaataccacaa 380  Q
    |||| |||||||||||||||||||    
T  52810391 aagagtcttgattgaataccacaa 52810368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 140 - 252
Target Start/End: Original strand, 6131210 - 6131321
Alignment:
Q  140 tagtaaaatcttaaaagagaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatcca 239  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  6131210 tagtaaaatcttaaaaga-aaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 6131308  T
Q  240 tcaaaatctgatt 252  Q
    |||||||||||||    
T  6131309 tcaaaatctgatt 6131321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 157 - 341
Target Start/End: Complemental strand, 18749825 - 18749641
Alignment:
Q  157 agaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttatt 256  Q
    ||||||||||||  |||||||||||| ||||||||||||||||||||||| ||||||| || || ||||||||||||||||||||||||||  |||||||    
T  18749825 agaaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttatt 18749726  T
Q  257 aaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagac 341  Q
    |||||||| || |||||||||||||||||||||||||| ||||       ||||||| || ||| || |||||||||| ||||||    
T  18749725 aaacaatccttcgaaatttgaatgattttgaataccacaagactttttttaagtgatgaaaagtttttattgaatacctcaagac 18749641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 219 - 384
Target Start/End: Original strand, 1440007 - 1440173
Alignment:
Q  219 tagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaaga 318  Q
    |||||||||||| ||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||       ||||||||||||    
T  1440007 tagaaaatcccataaaatccatcaaaatctgatttattaaacaatccttggaaatttgaatgattttgaataccactagactttttttaagtgattaaga 1440106  T
Q  319 gtcttgattgaataccacaagac-nnnnnnnaaatgacaaagactcttgattgaataccacaagact 384  Q
    |||||||||||||||||||| ||        |||||||||||| ||||||||||||| |||||||||    
T  1440107 gtcttgattgaataccacaaaacttttttttaaatgacaaagaatcttgattgaataacacaagact 1440173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 157 - 371
Target Start/End: Complemental strand, 26107474 - 26107260
Alignment:
Q  157 agaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttatt 256  Q
    ||||||||||||  |||||||||||| |||| |||||| ||||||||||| ||||||| || || |||||| |||||||||||||||||||  |||||||    
T  26107474 agaaaaacaatctcaagaaatctcatctttttatgaaatactttttcttgttaaaattacactacaaaatcacacaaaatccatcaaaatccaatttatt 26107375  T
Q  257 aaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgaca 356  Q
    |||||||| || |||||||||||||||||||||||||| ||||       || |||| || ||||||||||||||||| ||||||       ||||||||    
T  26107374 aaacaatccttcgaaatttgaatgattttgaataccacaagactttttttaattgatgaaaagtcttgattgaatacctcaagacttttttaaaatgaca 26107275  T
Q  357 aagactcttgattga 371  Q
    |||| ||||||||||    
T  26107274 aagaatcttgattga 26107260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 159 - 380
Target Start/End: Complemental strand, 32580387 - 32580167
Alignment:
Q  159 aaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttattaa 258  Q
    ||||||||||  |||||||||||| ||||||||||||||||||||||| ||||||| || || |||||||| |||||||||||||||||  |||||||||    
T  32580387 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatccctcaaaatccatcaaaatccaatttattaa 32580288  T
Q  259 acaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaa 358  Q
    |||||| || |||||||||||||||||||||||||| ||||       || |||| || |||||| |||||||||| ||||||       ||||||||||    
T  32580287 acaatccttcgaaatttgaatgattttgaataccacaagactttttttaaatgatgaaaagtctt-attgaatacctcaagacttttttaaaatgacaaa 32580189  T
Q  359 gactcttgattgaataccacaa 380  Q
    ||  |||||| |||||||||||    
T  32580188 gagccttgatcgaataccacaa 32580167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 157 - 384
Target Start/End: Original strand, 51737719 - 51737947
Alignment:
Q  157 agaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttatt 256  Q
    ||||||||||||  |||||  || || |||| |||||||||||||||||| ||||||| ||  | ||||||||||||||||||||||||||  |||||||    
T  51737719 agaaaaacaatctcaagaatacttatctttttatgaaagactttttcttgttaaaattacacaacaaaatcccacaaaatccatcaaaatccaatttatt 51737818  T
Q  257 aaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagac-nnnnnnnaaatgac 355  Q
    |||||||| || |||||||||||||||||||||||||| ||||       ||||||| || ||||||||||||||||| ||||||        ||||||     
T  51737819 aaacaatccttcgaaatttgaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattgaatacctcaagactttttttaaaatgat 51737918  T
Q  356 aaagactcttgattgaataccacaagact 384  Q
    ||||| |||||||||||||||||||||||    
T  51737919 aaagagtcttgattgaataccacaagact 51737947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 157 - 372
Target Start/End: Complemental strand, 48379370 - 48379155
Alignment:
Q  157 agaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttatt 256  Q
    ||||||||||||  ||||||||| || |||||||||||||| |||||||  ||||||| || || |||||||||||||||||||||||||   |||||||    
T  48379370 agaaaaacaatctcaagaaatctgatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatccatcaaaattcaatttatt 48379271  T
Q  257 aaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgaca 356  Q
    |||||||| || |||||||||||||||||||||||||| ||||       ||||||| || ||||| ||||||||||| ||||||       ||||||||    
T  48379270 aaacaatccttcgaaatttgaatgattttgaataccacaagactttttttaagtgatgaaaagtctagattgaatacctcaagacttttttaaaatgaca 48379171  T
Q  357 aagactcttgattgaa 372  Q
    |||| |||||||||||    
T  48379170 aagagtcttgattgaa 48379155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 159 - 293
Target Start/End: Complemental strand, 5825273 - 5825139
Alignment:
Q  159 aaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttattaa 258  Q
    |||||||||| |||||||||||||||||||||||||| ||||||| ||||| ||||||| || |||||||||||||||| |||||||||  |||||||||    
T  5825273 aaaaacaatcataagaaatctcatgttttcatgaaagcctttttcatgctagaatttcactaaaaaatcccacaaaatctatcaaaatccaatttattaa 5825174  T
Q  259 acaatcatttgaaatttgaatgattttgaatacca 293  Q
    |||||| ||  ||||||||||||||||||||||||    
T  5825173 acaatccttcaaaatttgaatgattttgaatacca 5825139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 157 - 384
Target Start/End: Original strand, 31646279 - 31646504
Alignment:
Q  157 agaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttatt 256  Q
    |||| |||||||  ||||||||||||  |||||||||||||||||||||| ||||||| || || ||||||||||||||||||||||||||  ||| |||    
T  31646279 agaataacaatctcaagaaatctcat--tttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaattcatt 31646376  T
Q  257 aaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgaca 356  Q
    |||||||| || |||||||||||||||||||||||||| |||        || |||| || ||||||||||||||||  ||||||       |||| |||    
T  31646377 aaacaatctttcgaaatttgaatgattttgaataccacaagattttttttaaatgatgaaaagtcttgattgaatacgtcaagacttttttaaaataaca 31646476  T
Q  357 aagactcttgattgaataccacaagact 384  Q
    |||| |||||||||||||||| ||||||    
T  31646477 aagagtcttgattgaataccataagact 31646504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 157 - 384
Target Start/End: Original strand, 52617964 - 52618185
Alignment:
Q  157 agaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttatt 256  Q
    ||||||||||||  |||||||||||| |||| ||||||||||| ||      |||||| || || ||||||||||||||||||||||||||  |||||||    
T  52617964 agaaaaacaatctcaagaaatctcatctttttatgaaagacttgtt------aaaattacactacaaaatcccacaaaatccatcaaaatccaatttatt 52618057  T
Q  257 aaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgaca 356  Q
    |||||||| || |||||||||||||||||||||||||| ||||       ||||||| || ||||||||||||||||| ||||||       ||||||||    
T  52618058 aaacaatccttcgaaatttgaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattgaatacctcaagacttttttaaaatgaca 52618157  T
Q  357 aagactcttgattgaataccacaagact 384  Q
    |||| ||||||||||||| |||| ||||    
T  52618158 aagagtcttgattgaatatcacatgact 52618185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 159 - 384
Target Start/End: Original strand, 50903235 - 50903463
Alignment:
Q  159 aaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttattaa 258  Q
    ||||||||||  |||||||||||| ||||||| ||||| ||||||||| ||||||| || || ||||||||||||||||||||||||||  |||||||||    
T  50903235 aaaaacaatctcaagaaatctcatattttcataaaagattttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaa 50903334  T
Q  259 acaatcatttgaaatttgaatgattttgaataccactagac---nnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgac 355  Q
    |||||| ||   |||||||||||||||||||||||| ||||          || |||| || |||||||||||||||||  |||||       |||||||    
T  50903335 acaatccttcttaatttgaatgattttgaataccacaagacttttttttttaaatgataaaaagtcttgattgaataccttaagacttttttaaaatgac 50903434  T
Q  356 aaagactcttgattgaataccacaagact 384  Q
    ||||| |||||||||||||||||||||||    
T  50903435 aaagagtcttgattgaataccacaagact 50903463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 157 - 384
Target Start/End: Original strand, 10728644 - 10728861
Alignment:
Q  157 agaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttatt 256  Q
    ||||||||||||  |||||||||||| ||||||||||||||||||||||| ||||||| || ||          |||||||||||||||||  |||||||    
T  10728644 agaaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacacta----------caaaatccatcaaaatccaatttatt 10728733  T
Q  257 aaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgaca 356  Q
    |||||||| ||  |||||||||||||||| |||||||| ||||       ||||||| || ||||||||||||||||| ||||||       ||||||||    
T  10728734 aaacaatccttccaaatttgaatgattttaaataccacaagactttttgtaagtgatgaaaagtcttgattgaatacctcaagacttttttaaaatgaca 10728833  T
Q  357 aagactcttgattgaataccacaagact 384  Q
    |||| |||||||||||||||||||||||    
T  10728834 aagagtcttgattgaataccacaagact 10728861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 199 - 384
Target Start/End: Complemental strand, 22057933 - 22057747
Alignment:
Q  199 ttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactaga 298  Q
    ||||| || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||  | ||||||||||||||||| ||||||||||||    
T  22057933 ttttcatgttaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccatcgaaatttgaatgattttaaataccactaga 22057834  T
Q  299 cnnnnnnnaagtgattaagagtcttgattgaataccacaag-acnnnnnnnaaatgacaaagactcttgattgaataccacaagact 384  Q
            ||||||| |||||||||||| ||||||||||||          |||||||||||| ||||||||||||| |||||||||    
T  22057833 ttttttttaagtgatcaagagtcttgatggaataccacaagttttttttttaaatgacaaagaatcttgattgaataacacaagact 22057747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 157 - 380
Target Start/End: Complemental strand, 37455064 - 37454851
Alignment:
Q  157 agaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttatt 256  Q
    ||||||||||||  |||||||||||| ||||||||||| ||||||||||| ||||||| || || ||||||||||||||| ||          |||||||    
T  37455064 agaaaaacaatctcaagaaatctcatcttttcatgaaatactttttcttgttaaaattacactacaaaatcccacaaaattca----------atttatt 37454975  T
Q  257 aaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgaca 356  Q
    ||||||||||| |||||||||||||||||||||||||| ||||       || |||| || ||||||||||||||| | ||||||       ||||||||    
T  37454974 aaacaatcattcgaaatttgaatgattttgaataccacaagactttttttaaatgatgaaaagtcttgattgaatatctcaagacttttttaaaatgaca 37454875  T
Q  357 aagactcttgattgaataccacaa 380  Q
    |||| |||||||||||||||||||    
T  37454874 aagaatcttgattgaataccacaa 37454851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 140 - 264
Target Start/End: Original strand, 1439869 - 1439994
Alignment:
Q  140 tagtaaaatcttaaaa-gagaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatcc 238  Q
    |||||||||||||||| || |||||||||||||| ||||||||||||||| |||||||||||||| | | ||||||| | |||||||||||||||||||     
T  1439869 tagtaaaatcttaaaaagaaaaaaacaatcctaaaaaatctcatgttttcgtgaaagactttttcataccaaaattttactagaaaatcccacaaaatct 1439968  T
Q  239 atcaaaatctgatttattaaacaatc 264  Q
    |||||||||| |||||||||||||||    
T  1439969 atcaaaatctaatttattaaacaatc 1439994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 159 - 335
Target Start/End: Complemental strand, 27899545 - 27899379
Alignment:
Q  159 aaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttattaa 258  Q
    |||||||||| |||||||| ||||||||||||||||||||||||| ||||||||||||| |||||||||| |          ||||||||||||||||||    
T  27899545 aaaaacaatcataagaaatttcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatccta----------caaaatctgatttattaa 27899456  T
Q  259 acaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatacca 335  Q
    |||||| || |||||||||||||||||||||||||| ||||       || |||  |||||||||||||||||||||    
T  27899455 acaatccttcgaaatttgaatgattttgaataccaccagactttttttaaatgacaaagagtcttgattgaatacca 27899379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 175 - 384
Target Start/End: Complemental strand, 20833187 - 20832978
Alignment:
Q  175 aatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcatttgaaatt 274  Q
    ||||| || ||||||||||| ||||||||||| ||||||| || ||  ||||| |||||||||||||||||||  ||||||||||||||| ||   ||||    
T  20833187 aatcttatcttttcatgaaatactttttcttgttaaaattacactaataaatctcacaaaatccatcaaaatccaatttattaaacaatccttccgaatt 20833088  T
Q  275 tgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagactcttgattgaata 374  Q
    |||||||||||||||||||| ||||       ||||||| || | ||||||||||||||| ||||||       |||||||||||| |||||||| ||||    
T  20833087 tgaatgattttgaataccacaagactttttttaagtgatgaaaattcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattaaata 20832988  T
Q  375 ccacaagact 384  Q
    |||| |||||    
T  20832987 ccacgagact 20832978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 140 - 298
Target Start/End: Complemental strand, 52080142 - 52079999
Alignment:
Q  140 tagtaaaatcttaaaagagaaaaa-caatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatcc 238  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||||||      |||||||| |||||||||||||||||||||||||||||||||     
T  52080142 tagtaaaatcttaaaagaaaaaaaacaatcctaagaaatctcatgttttca------actttttcatgctaaaatttcattagaaaatcccacaaaatc- 52080050  T
Q  239 atcaaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactaga 298  Q
             ||||||||||||||||| ||  |||||||||||||||||||||||||||||    
T  52080049 ---------tgatttattaaacaatccttcaaaatttgaatgattttgaataccactaga 52079999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 157 - 380
Target Start/End: Complemental strand, 39038243 - 39038030
Alignment:
Q  157 agaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttatt 256  Q
    |||||||||||   |||||||||||| |||| |||||||||||||||||| ||||||| || ||          |||||||||||||||||  |||||||    
T  39038243 agaaaaacaatttcaagaaatctcatctttttatgaaagactttttcttgttaaaattacacta----------caaaatccatcaaaatccaatttatt 39038154  T
Q  257 aaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgaca 356  Q
    |||||||  || |||||||||||||||||| ||||||| ||||       ||||||| || ||||||||||||||||| ||||||       ||||||||    
T  39038153 aaacaattcttcgaaatttgaatgattttggataccacaagacttttttaaagtgatgaaaagtcttgattgaatacctcaagacttttttaaaatgaca 39038054  T
Q  357 aagactcttgattgaataccacaa 380  Q
    |||| |||||||||||||||||||    
T  39038053 aagagtcttgattgaataccacaa 39038030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 157 - 384
Target Start/End: Original strand, 50762053 - 50762270
Alignment:
Q  157 agaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttatt 256  Q
    ||||||||||||  |||||||||||| ||||||||||||||||||||||| ||||||| ||          | ||||||||||||||||||  ||||||     
T  50762053 agaaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattaca----------ctacaaaatccatcaaaatccaatttatc 50762142  T
Q  257 aaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgaca 356  Q
    ||||||||||| |||||| ||||||||||||||||||| ||||       || | || || |||| |||||||||| | ||||||       ||||||||    
T  50762143 aaacaatcattcgaaattagaatgattttgaataccacaagactttttttaaattatgaaaagtcatgattgaatatctcaagacttttttaaaatgaca 50762242  T
Q  357 aagactcttgattgaataccacaagact 384  Q
    |||| |||||||||||||||||||||||    
T  50762243 aagagtcttgattgaataccacaagact 50762270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 230 - 384
Target Start/End: Complemental strand, 10660675 - 10660521
Alignment:
Q  230 acaaaatccatcaaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 329  Q
    ||||||||||||||||||  ||||||||||||||| || |||||||||||||||||||||||||| | ||       || |||| || ||||||||||||    
T  10660675 acaaaatccatcaaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaatactttttttaaatgatgaaaagtcttgattga 10660576  T
Q  330 ataccacaagacnnnnnnnaaatgacaaagactcttgattgaataccacaagact 384  Q
    ||||| ||||||       |||||||||||| |||||||||||||||||||||||    
T  10660575 atacctcaagacttttttaaaatgacaaagagtcttgattgaataccacaagact 10660521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 157 - 384
Target Start/End: Complemental strand, 44276588 - 44276375
Alignment:
Q  157 agaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttatt 256  Q
    ||||||| ||||| || ||||||||||| ||||||||||| ||||||||| |||||||||| |||||||||||||||||||||          |||||||    
T  44276588 agaaaaataatcccaaaaaatctcatgtcttcatgaaagattttttcttgttaaaatttcactagaaaatcccacaaaatcca----------atttatt 44276499  T
Q  257 aaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgaca 356  Q
    |||||||| |    |||||||||||||||||||||||  ||||       ||||||| || | ||||||||||||||| ||||||       ||||||||    
T  44276498 aaacaatcct----aatttgaatgattttgaataccatgagactttttttaagtgatgaaaaatcttgattgaatacctcaagacttttttaaaatgaca 44276403  T
Q  357 aagactcttgattgaataccacaagact 384  Q
    |||| | || ||||||||||||||||||    
T  44276402 aagagttttaattgaataccacaagact 44276375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 157 - 299
Target Start/End: Original strand, 39842487 - 39842619
Alignment:
Q  157 agaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttatt 256  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||||||| ||||||| ||||          ||||||||| ||||||||| |||||||    
T  39842487 agaaaaacaatcccaagaaatctcatcttttcatgaaagactttttcttgttaaaattacatt----------acaaaatccgtcaaaatctaatttatt 39842576  T
Q  257 aaacaatcatttgaaatttgaatgattttgaataccactagac 299  Q
    |||||||  || |||||||||||||||||||||| ||| ||||    
T  39842577 aaacaattcttcgaaatttgaatgattttgaatatcacgagac 39842619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 241 - 384
Target Start/End: Original strand, 23753463 - 23753606
Alignment:
Q  241 caaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaaga 340  Q
    |||||||  ||||||||||||||| || |||||||||||||||||||||||||| ||||       || |||| || ||||||||||||||||| |||||    
T  23753463 caaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagactttttttaaatgatgaaaagtcttgattgaatacctcaaga 23753562  T
Q  341 cnnnnnnnaaatgacaaagactcttgattgaataccacaagact 384  Q
    |       |||||||||||| |||||||||||||||||||||||    
T  23753563 cttttttaaaatgacaaagaatcttgattgaataccacaagact 23753606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 196 - 290
Target Start/End: Complemental strand, 55235359 - 55235264
Alignment:
Q  196 actttttcttgctaaaatttcattagaaaatcccacaaaa-tccatcaaaatctgatttattaaacaatcatttgaaatttgaatgattttgaata 290  Q
    |||||||  ||||||||||||||||||||||||||||||| |||||||||| |  ||||||||||||||| || ||||||||||||||||||||||    
T  55235359 acttttttatgctaaaatttcattagaaaatcccacaaaaatccatcaaaaaccaatttattaaacaatctttcgaaatttgaatgattttgaata 55235264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 162 - 217
Target Start/End: Original strand, 33807678 - 33807733
Alignment:
Q  162 aacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttca 217  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  33807678 aacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttca 33807733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 182 - 384
Target Start/End: Complemental strand, 6975924 - 6975735
Alignment:
Q  182 tgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcatttgaaatttgaatga 281  Q
    ||||||||||||||||| |||| |||| |||||| | |||||||||||||||| ||||          ||||| |||| |||  || |||||||||||||    
T  6975924 tgttttcatgaaagactgtttcatgctcaaattttactagaaaatcccacaaattcca----------atttagtaaataattcttcgaaatttgaatga 6975835  T
Q  282 ttttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagactcttgattgaataccacaag 381  Q
    ||||||||||||| ||||       || |||| || ||||||||||||||||| ||||||       |||| ||||||| ||||||||||||||||||||    
T  6975834 ttttgaataccacaagac--tttttaaatgatgaaaagtcttgattgaatacctcaagac-tttttaaaataacaaagagtcttgattgaataccacaag 6975738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 157 - 228
Target Start/End: Complemental strand, 45863054 - 45862983
Alignment:
Q  157 agaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcc 228  Q
    ||||||||||||  |||||||||||| ||||||||||||||||||||||| ||||||| || || |||||||    
T  45863054 agaaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcc 45862983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 236 - 341
Target Start/End: Original strand, 539476 - 539581
Alignment:
Q  236 tccatcaaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatacca 335  Q
    ||||||||||||  |||||||||| |||| || |||||||||||||||||||||||||| ||||       || |||| || | |||||||||||||||     
T  539476 tccatcaaaatccaatttattaaataatccttcgaaatttgaatgattttgaataccacaagactttttttaaatgatgaaaaatcttgattgaatacct 539575  T
Q  336 caagac 341  Q
    ||||||    
T  539576 caagac 539581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 15492862 - 15492942
Alignment:
Q  159 aaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatcca 239  Q
    ||||||||||  ||||||||| |||  ||||||||||| ||||||||| |||||||||| ||||| |||| ||||||||||    
T  15492862 aaaaacaatctcaagaaatcttatgacttcatgaaagattttttcttgttaaaatttcactagaatatcctacaaaatcca 15492942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 270 - 384
Target Start/End: Complemental strand, 12103729 - 12103615
Alignment:
Q  270 aaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagactcttgatt 369  Q
    ||||||||||||||||||||||||  ||||       ||||||| || | ||||||||||||||| ||||||       |||||||||||| |||| |||    
T  12103729 aaatttgaatgattttgaataccatgagactttttttaagtgatgaaaaatcttgattgaatacctcaagacttttttaaaatgacaaagaatcttaatt 12103630  T
Q  370 gaataccacaagact 384  Q
    ||||||||| |||||    
T  12103629 gaataccacgagact 12103615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 307 - 384
Target Start/End: Complemental strand, 18749633 - 18749556
Alignment:
Q  307 aagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagactcttgattgaataccacaagact 384  Q
    ||||||| || ||| ||||||||||||| ||||||       |||||||||||| |||||||||||||||||||||||    
T  18749633 aagtgatgaaaagttttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaataccacaagact 18749556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 310 - 380
Target Start/End: Original strand, 6131317 - 6131387
Alignment:
Q  310 tgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagactcttgattgaataccacaa 380  Q
    ||||||||||||||||||||||||||||| ||       ||||||||| || ||||||||||||| |||||    
T  6131317 tgattaagagtcttgattgaataccacaaaactttttttaaatgacaatgagtcttgattgaataacacaa 6131387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 227
Target Start/End: Complemental strand, 12103789 - 12103733
Alignment:
Q  172 agaaatctca-tgttttcatgaaagactttttcttgctaaaatttcattagaaaatc 227  Q
    |||||||||| ||| |||||||||||||| |||||| |||||||||| |||||||||    
T  12103789 agaaatctcaatgtcttcatgaaagacttattcttgttaaaatttcactagaaaatc 12103733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 159 - 214
Target Start/End: Original strand, 23753402 - 23753456
Alignment:
Q  159 aaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatt 214  Q
    ||||||||||  |||||||||||| ||| ||||||||||||||||||| |||||||    
T  23753402 aaaaacaatctcaagaaatctcatcttt-catgaaagactttttcttgttaaaatt 23753456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 349 - 384
Target Start/End: Original strand, 27240428 - 27240463
Alignment:
Q  349 aaatgacaaagactcttgattgaataccacaagact 384  Q
    |||||||||||| |||||||||||||||||||||||    
T  27240428 aaatgacaaagagtcttgattgaataccacaagact 27240463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 338
Target Start/End: Original strand, 23535890 - 23535984
Alignment:
Q  243 aaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaa 338  Q
    |||||| ||| ||||||| ||| ||  ||||||||||||||||||||||||| ||||       ||||||| |||||| |||||||||| ||||||    
T  23535890 aaatctaattaattaaacgatccttctaaatttgaatgattttgaataccacaagactttttttaagtgatgaagagt-ttgattgaatgccacaa 23535984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0400 (Bit Score: 167; Significance: 2e-89; HSPs: 1)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 140 - 384
Target Start/End: Original strand, 15009 - 15253
Alignment:
Q  140 tagtaaaatcttaaaagagaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatcca 239  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  15009 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatttcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 15108  T
Q  240 tcaaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 339  Q
    ||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||| |||||    
T  15109 tcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaatactacaag 15208  T
Q  340 acnnnnnnnaaatgacaaagactcttgattgaataccacaagact 384  Q
    ||       |||||||||||| ||||||||||||| |||||||||    
T  15209 actttttttaaatgacaaagaatcttgattgaataacacaagact 15253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0365 (Bit Score: 167; Significance: 2e-89; HSPs: 1)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 140 - 384
Target Start/End: Original strand, 15652 - 15896
Alignment:
Q  140 tagtaaaatcttaaaagagaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatcca 239  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  15652 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatttcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 15751  T
Q  240 tcaaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 339  Q
    ||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||| |||||    
T  15752 tcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaatactacaag 15851  T
Q  340 acnnnnnnnaaatgacaaagactcttgattgaataccacaagact 384  Q
    ||       |||||||||||| ||||||||||||| |||||||||    
T  15852 actttttttaaatgacaaagaatcttgattgaataacacaagact 15896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 167; Significance: 2e-89; HSPs: 66)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 140 - 380
Target Start/End: Complemental strand, 973416 - 973176
Alignment:
Q  140 tagtaaaatcttaaaagagaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatcca 239  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  973416 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcactagaaaatcccacaaaatcca 973317  T
Q  240 tcaaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 339  Q
    ||||||||||||||||||||||||| || |||||||||||||||||||||||||||| |        |||||||||||||||||||||||||||||||||    
T  973316 tcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactaaattttttttaagtgattaagagtcttgattgaataccacaag 973217  T
Q  340 acnnnnnnnaaatgacaaagactcttgattgaataccacaa 380  Q
    ||       |||||||||||| ||||||||||||| |||||    
T  973216 actttttttaaatgacaaagaatcttgattgaataacacaa 973176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 140 - 384
Target Start/End: Original strand, 18914710 - 18914954
Alignment:
Q  140 tagtaaaatcttaaaagagaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatcca 239  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  18914710 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 18914809  T
Q  240 tcaaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 339  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||    
T  18914810 tcaaaatctgatttattaaacaaacctttgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaag 18914909  T
Q  340 acnnnnnnnaaatgacaaagactcttgattgaataccacaagact 384  Q
    ||       ||| |||||||| | ||||||||||| |||||||||    
T  18914910 actttttttaaaggacaaagaattttgattgaataacacaagact 18914954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 140 - 384
Target Start/End: Original strand, 43581065 - 43581309
Alignment:
Q  140 tagtaaaatcttaaaagagaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatcca 239  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  43581065 tagtaaaatcttaaaagaaaaaaataatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 43581164  T
Q  240 tcaaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 339  Q
    ||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||| |||||    
T  43581165 tcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaatacaacaag 43581264  T
Q  340 acnnnnnnnaaatgacaaagactcttgattgaataccacaagact 384  Q
    ||       |||||||||||| ||||||||||||| |||||||||    
T  43581265 actttttttaaatgacaaagaatcttgattgaataacacaagact 43581309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 143 - 384
Target Start/End: Original strand, 7719238 - 7719479
Alignment:
Q  143 taaaatcttaaaagagaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatca 242  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  7719238 taaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatca 7719337  T
Q  243 aaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacn 342  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||     
T  7719338 aaatctgatttattaaacaatcattcgaaatttgaatgattttgaataccactagattttttttaagtgattaagagtcttgattgaataccacaagact 7719437  T
Q  343 nnnnnnaaatgacaaagactcttgattgaataccacaagact 384  Q
          |||||||||| | | ||||||||||| |||||||||    
T  7719438 ttttttaaatgacaaataatattgattgaataacacaagact 7719479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 163; E-Value: 6e-87
Query Start/End: Original strand, 140 - 384
Target Start/End: Complemental strand, 30441028 - 30440784
Alignment:
Q  140 tagtaaaatcttaaaagagaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatcca 239  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||| | ||||||||||| |||||||||||||||||||||    
T  30441028 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcacgaaagactttttcatactaaaatttcactagaaaatcccacaaaatcca 30440929  T
Q  240 tcaaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 339  Q
    ||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||    
T  30440928 tcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaag 30440829  T
Q  340 acnnnnnnnaaatgacaaagactcttgattgaataccacaagact 384  Q
    |        |||||||||||| ||||||||||||| |||||||||    
T  30440828 attttttttaaatgacaaagaatcttgattgaataacacaagact 30440784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 163; E-Value: 6e-87
Query Start/End: Original strand, 140 - 384
Target Start/End: Original strand, 40996624 - 40996868
Alignment:
Q  140 tagtaaaatcttaaaagagaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatcca 239  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| ||||||||||    
T  40996624 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcctacaaaatcca 40996723  T
Q  240 tcaaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 339  Q
    ||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||       ||| |||||||||||||||||||||||||||||    
T  40996724 tcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagcgattaagagtcttgattgaataccacaag 40996823  T
Q  340 acnnnnnnnaaatgacaaagactcttgattgaataccacaagact 384  Q
    ||       |||||||||||| ||||||||||||| ||| |||||    
T  40996824 actttttttaaatgacaaagaatcttgattgaataacacgagact 40996868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 140 - 384
Target Start/End: Complemental strand, 34695505 - 34695261
Alignment:
Q  140 tagtaaaatcttaaaagagaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatcca 239  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  34695505 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 34695406  T
Q  240 tcaaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 339  Q
    ||||||||||||||||||||||||| || |||||||||||| |||||||||||||| |||       ||||||||||||||||||||||||||||||||     
T  34695405 tcaaaatctgatttattaaacaatccttcgaaatttgaatggttttgaataccactggactttttttaagtgattaagagtcttgattgaataccacaaa 34695306  T
Q  340 acnnnnnnnaaatgacaaagactcttgattgaataccacaagact 384  Q
    ||       ||||||||| || ||||||||||||| |||||||||    
T  34695305 actttttttaaatgacaaggaatcttgattgaataacacaagact 34695261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 140 - 384
Target Start/End: Complemental strand, 47879400 - 47879156
Alignment:
Q  140 tagtaaaatcttaaaagagaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatcca 239  Q
    |||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| ||||||||||||    
T  47879400 tagtaaaatcttaaaagaaaaaaacaatcttaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaattccacaaaatcca 47879301  T
Q  240 tcaaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 339  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||||||||| ||||||||       ||||||||||||||||||||||||||||||| |    
T  47879300 tcaaaatctgatttattaaacaatccttttaaatttgaatgattttgaatatcactagactttttttaagtgattaagagtcttgattgaataccacatg 47879201  T
Q  340 acnnnnnnnaaatgacaaagactcttgattgaataccacaagact 384  Q
    ||       |||||||||||| ||||||||||||| |||||||||    
T  47879200 actttttttaaatgacaaagaatcttgattgaataacacaagact 47879156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 140 - 384
Target Start/End: Complemental strand, 47914498 - 47914254
Alignment:
Q  140 tagtaaaatcttaaaagagaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatcca 239  Q
    |||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  47914498 tagtaaaatcttaaaagaaaaaaacaatcttaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 47914399  T
Q  240 tcaaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 339  Q
    ||||||||| ||||||||||||||| || |||||||||||||||||||||| ||||||||       ||||||||||||||||||||||||||||||| |    
T  47914398 tcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaatatcactagactttttttaagtgattaagagtcttgattgaataccacatg 47914299  T
Q  340 acnnnnnnnaaatgacaaagactcttgattgaataccacaagact 384  Q
    ||       |||||||||||| ||||||||||||| |||||||||    
T  47914298 actttttttaaatgacaaagaatcttgattgaataacacaagact 47914254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 156; E-Value: 9e-83
Query Start/End: Original strand, 143 - 384
Target Start/End: Original strand, 44343374 - 44343615
Alignment:
Q  143 taaaatcttaaaagagaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatca 242  Q
    ||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  44343374 taaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcgtgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatca 44343473  T
Q  243 aaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacn 342  Q
    |||||||||||||||||||||| || ||||||||||||||||| |||||||||| ||       |||||||||||||||||||||||||| ||||||||     
T  44343474 aaatctgatttattaaacaatccttcgaaatttgaatgattttaaataccactaaactttttttaagtgattaagagtcttgattgaatatcacaagact 44343573  T
Q  343 nnnnnnaaatgacaaagactcttgattgaataccacaagact 384  Q
          |||||||||||| ||||||||||||| |||||||||    
T  44343574 ttttttaaatgacaaagaatcttgattgaataacacaagact 44343615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 140 - 384
Target Start/End: Complemental strand, 34009245 - 34009000
Alignment:
Q  140 tagtaaaatcttaaaagagaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatcca 239  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||  ||||||||||| |||||||||| ||||||||||||    
T  34009245 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcttgaaagacttttttatgctaaaattttattagaaaattccacaaaatcca 34009146  T
Q  240 tcaaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccacta-gacnnnnnnnaagtgattaagagtcttgattgaataccacaa 338  Q
    ||||||||||||||||||||||||| || |||||||||||||||||||||||||||| |||       |||||||||||||| |||||||||||||||||    
T  34009145 tcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactaggactttttttaagtgattaagagtgttgattgaataccacaa 34009046  T
Q  339 gacnnnnnnnaaatgacaaagactcttgattgaataccacaagact 384  Q
    |||       |||||||||| | ||||||||||||| |||||||||    
T  34009045 gactttttttaaatgacaaataatcttgattgaataacacaagact 34009000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 143 - 384
Target Start/End: Complemental strand, 12893639 - 12893396
Alignment:
Q  143 taaaatcttaaaagagaaaaa--caatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccat 240  Q
    ||||||||||||||| |||||  |||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| ||||||||||||    
T  12893639 taaaatcttaaaagaaaaaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatctcacaaaatccat 12893540  T
Q  241 caaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaaga 340  Q
    |||||||||||||||||||||||  || ||||||||||||||||||||||||| |||||       ||||||||||||||||||||| ||||||||||||    
T  12893539 caaaatctgatttattaaacaattcttcgaaatttgaatgattttgaataccattagactttttttaagtgattaagagtcttgattaaataccacaaga 12893440  T
Q  341 cnnnnnnnaaatgacaaagactcttgattgaataccacaagact 384  Q
    |       |||||||||||| ||||||||||||| |||||||||    
T  12893439 ctttttttaaatgacaaagaatcttgattgaataacacaagact 12893396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 147 - 341
Target Start/End: Original strand, 7718345 - 7718538
Alignment:
Q  147 atcttaaaagagaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaat 246  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  7718345 atcttaaaaga-aaaaacaatcctaagaaatctcatgttttcatgaaagattttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaat 7718443  T
Q  247 ctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagac 341  Q
    |||||||||||||||||| || |||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||    
T  7718444 ctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaagac 7718538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 140 - 341
Target Start/End: Original strand, 39219352 - 39219552
Alignment:
Q  140 tagtaaaatcttaaaagagaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatcca 239  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  39219352 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 39219451  T
Q  240 tcaaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 339  Q
    |||||||||||||||||||||||||| |  |||||||||||||||||||||||| |||||       |||||||||||||||||||||||||| ||||||    
T  39219452 tcaaaatctgatttattaaacaatca-tcaaaatttgaatgattttgaataccaatagactttttttaagtgattaagagtcttgattgaataacacaag 39219550  T
Q  340 ac 341  Q
    ||    
T  39219551 ac 39219552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 140 - 384
Target Start/End: Original strand, 20275238 - 20275482
Alignment:
Q  140 tagtaaaatcttaaaagagaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatcca 239  Q
    |||||||||||||||||| ||||||||| ||||||||||||||| |||||||| |||||||||| ||||||||||||| || ||||||||||||||||||    
T  20275238 tagtaaaatcttaaaagaaaaaaacaatgctaagaaatctcatgctttcatgacagactttttcatgctaaaatttcactaaaaaatcccacaaaatcca 20275337  T
Q  240 tcaaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 339  Q
    ||||||||||||||||||||||||| || |||||||||||||||||||||||||  ||||       ||||||||||||||||||||||||||||| |||    
T  20275338 tcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccataagactttttttaagtgattaagagtcttgattgaataccataag 20275437  T
Q  340 acnnnnnnnaaatgacaaagactcttgattgaataccacaagact 384  Q
    ||       ||||||||| || ||||||||||||| | |||||||    
T  20275438 actttttttaaatgacaaggaatcttgattgaataacccaagact 20275482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 143 - 341
Target Start/End: Original strand, 32142895 - 32143095
Alignment:
Q  143 taaaatcttaaaagagaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatca 242  Q
    ||||||||||||||| |||||||||| |||||||||||||||||| ||| ||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  32142895 taaaatcttaaaagaaaaaaacaatcttaagaaatctcatgtttttatggaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatca 32142994  T
Q  243 aaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagac--nnnnnnnaagtgattaagagtcttgattgaataccacaaga 340  Q
    |||||||||||||||||||||| ||  |||||||||||||||||||||||||  |||         ||||||||||||||||||||| ||||||| ||||    
T  32142995 aaatctgatttattaaacaatccttcaaaatttgaatgattttgaataccacgtgacttttttttgaagtgattaagagtcttgattcaataccataaga 32143094  T
Q  341 c 341  Q
    |    
T  32143095 c 32143095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 159 - 384
Target Start/End: Complemental strand, 23101504 - 23101279
Alignment:
Q  159 aaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttattaa 258  Q
    ||||||||||  |||||||||||| ||||||||||||||||||||||| ||||||| || || ||||||||||||||||||||||||||  |||||||||    
T  23101504 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaa 23101405  T
Q  259 acaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaa 358  Q
    |||||| || |||||||||||||||||||||||||| ||||       || |||| || ||||||||||||||||| ||||||       ||||||||||    
T  23101404 acaatccttcgaaatttgaatgattttgaataccacaagactttttttaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaa 23101305  T
Q  359 gactcttgattgaataccacaagact 384  Q
    || |||||||||||||||||||||||    
T  23101304 gagtcttgattgaataccacaagact 23101279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 159 - 384
Target Start/End: Complemental strand, 28342553 - 28342328
Alignment:
Q  159 aaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttattaa 258  Q
    ||||||||||  |||||||||||| ||||||||||||||||||||||| ||||||| || || ||||||||||||||||||||||||||  |||||||||    
T  28342553 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaa 28342454  T
Q  259 acaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaa 358  Q
    |||||| || |||||||||||||||||||||||||| ||||       || |||| || ||||| ||||||||||| ||||||       ||||||||||    
T  28342453 acaatccttcgaaatttgaatgattttgaataccacaagactttttttaaatgatgaaaagtctcgattgaatacctcaagacttttttaaaatgacaaa 28342354  T
Q  359 gactcttgattgaataccacaagact 384  Q
    || |||||||||||||||||||||||    
T  28342353 gagtcttgattgaataccacaagact 28342328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 159 - 384
Target Start/End: Complemental strand, 39784305 - 39784080
Alignment:
Q  159 aaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttattaa 258  Q
    ||||||||||  |||||||||||| ||||||||||||||||||||||| ||||||| || || ||||||||||||||||||||||||||  |||||||||    
T  39784305 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaa 39784206  T
Q  259 acaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaa 358  Q
    |||||| || ||||||| |||||||||||||||||| ||||       || |||| || ||||||||||||||||| ||||||       ||||||||||    
T  39784205 acaatccttcgaaatttaaatgattttgaataccacaagactttttttaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaa 39784106  T
Q  359 gactcttgattgaataccacaagact 384  Q
    || |||||||||||||||||||||||    
T  39784105 gagtcttgattgaataccacaagact 39784080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 157 - 384
Target Start/End: Complemental strand, 3023134 - 3022907
Alignment:
Q  157 agaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttatt 256  Q
    ||||||||||||  |||||||||||| ||||||||||| ||||||||||| ||||||| || || ||||||||||||||||||||||||||  |||||||    
T  3023134 agaaaaacaatctcaagaaatctcatcttttcatgaaaaactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttatt 3023035  T
Q  257 aaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgaca 356  Q
    |||||||| || |||||||||||||||||||||||||| ||||       ||||||| || | ||||||||||||||| ||||||       ||||||||    
T  3023034 aaacaatccttcgaaatttgaatgattttgaataccacaagactttttttaagtgatgaaaaatcttgattgaatacctcaagacttttttaaaatgaca 3022935  T
Q  357 aagactcttgattgaataccacaagact 384  Q
    || | |||||||||||||||||||||||    
T  3022934 aaaagtcttgattgaataccacaagact 3022907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 157 - 380
Target Start/End: Original strand, 9882229 - 9882451
Alignment:
Q  157 agaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttatt 256  Q
    ||||||||||||  |||||||||||| |||| |||||||||||||||||  ||||||| || || ||||||||||||||||||||||||||  |||||||    
T  9882229 agaaaaacaatctcaagaaatctcatttttt-atgaaagactttttcttcttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttatt 9882327  T
Q  257 aaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgaca 356  Q
    ||||||||||| |||||||||||||||||||||||||| ||||       ||||||| || ||||||||||||||||| ||||||       ||||||||    
T  9882328 aaacaatcattcgaaatttgaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattgaatacctcaagacttttttaaaatgaca 9882427  T
Q  357 aagactcttgattgaataccacaa 380  Q
    |||| |||||||||||||||||||    
T  9882428 aagagtcttgattgaataccacaa 9882451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 157 - 384
Target Start/End: Original strand, 28034797 - 28035024
Alignment:
Q  157 agaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttatt 256  Q
    ||||||||||||  |||||||||||| ||||||||||||||||||| ||| ||||||| || || ||||||||||||||||||||||||||  |||||||    
T  28034797 agaaaaacaatctcaagaaatctcatcttttcatgaaagacttttttttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttatt 28034896  T
Q  257 aaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgaca 356  Q
    |||||||| |||||||||||||| |||||||||||||| ||||       ||||||| || ||||||||||||||| | ||||||       ||||||||    
T  28034897 aaacaatcctttgaaatttgaataattttgaataccacaagactttttttaagtgatgaaaagtcttgattgaatatctcaagacttttttaaaatgaca 28034996  T
Q  357 aagactcttgattgaataccacaagact 384  Q
    || | |||||||||||||||||||||||    
T  28034997 aaaagtcttgattgaataccacaagact 28035024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 140 - 295
Target Start/End: Complemental strand, 7113684 - 7113529
Alignment:
Q  140 tagtaaaatcttaaaagagaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatcca 239  Q
    |||||||||| ||||||| ||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||   ||||||||||||||||||| |    
T  7113684 tagtaaaatcctaaaagaaaaaaacaatcctaagaaatttcatgttttcatgaaagactttttcatgctaaaattttcctagaaaatcccacaaaatcta 7113585  T
Q  240 tcaaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccact 295  Q
    ||||||||||||||||||||||||| |  ||||||||||| |||||||||||||||    
T  7113584 tcaaaatctgatttattaaacaatcctgcgaaatttgaattattttgaataccact 7113529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 141 - 384
Target Start/End: Complemental strand, 10068689 - 10068447
Alignment:
Q  141 agtaaaatcttaaaagagaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccat 240  Q
    |||||||| ||||||||  ||||||||||||| |||||||||||||| |||||| |||||||| ||||||||||||| ||||||||||||||||||||||    
T  10068689 agtaaaattttaaaaga--aaaacaatcctaacaaatctcatgtttttatgaaatactttttcatgctaaaatttcactagaaaatcccacaaaatccat 10068592  T
Q  241 caaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccac-aag 339  Q
    |||||| | ||||||||||||||| ||  ||||||||||||||||||||||||| ||||       ||||||| || | ||||||||||||||| | |||    
T  10068591 caaaatttaatttattaaacaatccttcaaaatttgaatgattttgaataccacaagactttttttaagtgatgaaaaatcttgattgaatacctcaaag 10068492  T
Q  340 acnnnnnnnaaatgacaaagactcttgattgaataccacaagact 384  Q
    ||       ||||| |||||| |||||||| ||||||||||||||    
T  10068491 acttttttaaaatggcaaagagtcttgattaaataccacaagact 10068447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 171 - 384
Target Start/End: Original strand, 29614770 - 29614983
Alignment:
Q  171 aagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcatttga 270  Q
    |||||||||||| ||||||||||||||||||||||| ||||||| || || ||||||||||||||||||||||||||  ||||||||||||||| || ||    
T  29614770 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcga 29614869  T
Q  271 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagactcttgattg 370  Q
    |||||||||||||||||||| ||| ||||       || |||| || ||||||||||||||||| ||||||       |||||||||||| |||||||||    
T  29614870 aatttgaatgattttgaatatcacaagactttttttaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattg 29614969  T
Q  371 aataccacaagact 384  Q
    ||||||||||||||    
T  29614970 aataccacaagact 29614983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 157 - 380
Target Start/End: Complemental strand, 18838597 - 18838374
Alignment:
Q  157 agaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttatt 256  Q
    ||||||||||||  |||||||||||| ||||||||||| ||||||||||| ||||||| || || ||||||||||||||||||||||||||  |||||||    
T  18838597 agaaaaacaatctcaagaaatctcatcttttcatgaaatactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttatt 18838498  T
Q  257 aaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgaca 356  Q
    |||||||| || |||||||||||||||||||||||||| ||||       ||| ||| || ||||||||||||||||| ||||||       |||| |||    
T  18838497 aaacaatctttcgaaatttgaatgattttgaataccacaagactttttttaagcgatgaaaagtcttgattgaatacctcaagacttttttaaaattaca 18838398  T
Q  357 aagactcttgattgaataccacaa 380  Q
    |||| |||||||||||||||||||    
T  18838397 aagagtcttgattgaataccacaa 18838374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 157 - 381
Target Start/End: Complemental strand, 33382845 - 33382621
Alignment:
Q  157 agaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttatt 256  Q
    ||||||||||||  || ||||||||| ||||||| ||||||||||||||| ||||||| || || ||||||||||||||||||||||||||  |||||||    
T  33382845 agaaaaacaatctaaataaatctcatcttttcataaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttatt 33382746  T
Q  257 aaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgaca 356  Q
    |||||||| || ||||||| |||||||||||||||||  ||||       ||||||| || ||||||||||||||||| ||||||       ||||||||    
T  33382745 aaacaatccttcgaaatttaaatgattttgaataccatgagactttttttaagtgatgaaaagtcttgattgaatacctcaagacttttttaaaatgaca 33382646  T
Q  357 aagactcttgattgaataccacaag 381  Q
    |||| ||||||||||||||||||||    
T  33382645 aagagtcttgattgaataccacaag 33382621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 160 - 384
Target Start/End: Complemental strand, 12740577 - 12740354
Alignment:
Q  160 aaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttattaaa 259  Q
    ||||||||| ||||||||||||| |||| |||||||||||| ||||| ||||||| || || |||||||||||||||| |||||||||  ||||||||||    
T  12740577 aaaacaatcttaagaaatctcatctttttatgaaagactttctcttgttaaaattacactataaaatcccacaaaatctatcaaaatc-catttattaaa 12740479  T
Q  260 caatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaag 359  Q
    ||||| ||||||||||||||||||||||||||||| ||||       || |||| || | |||||||| |||||| ||||||       |||||||||||    
T  12740478 caatcctttgaaatttgaatgattttgaataccacgagactttttttaaatgatgaaaaatcttgattaaatacctcaagactttttaaaaatgacaaag 12740379  T
Q  360 actcttgattgaataccacaagact 384  Q
    | |||||||||||||||||||||||    
T  12740378 aatcttgattgaataccacaagact 12740354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 140 - 384
Target Start/End: Complemental strand, 12963919 - 12963682
Alignment:
Q  140 tagtaaaatcttaaaagagaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatcca 239  Q
    ||||||||| ||||||||  |||||||||  |||||||||||||     |  |||||||||||||| ||||||||||| |||||||||||||||||||||    
T  12963919 tagtaaaattttaaaaga--aaaacaatctcaagaaatctcatg-----aaaaaagactttttcttactaaaatttcactagaaaatcccacaaaatcca 12963827  T
Q  240 tcaaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 339  Q
    ||||||||| ||||||||||||||| || |||||||||||||||||| ||||||| ||||       |||| || || | ||||||||||||| | ||||    
T  12963826 tcaaaatctaatttattaaacaatccttcgaaatttgaatgattttggataccacgagactttttttaagtaatgaaaaatcttgattgaatatctcaag 12963727  T
Q  340 acnnnnnnnaaatgacaaagactcttgattgaataccacaagact 384  Q
    ||       |||||||||||| |||||||||||||||||||||||    
T  12963726 acttttttaaaatgacaaagagtcttgattgaataccacaagact 12963682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 157 - 384
Target Start/End: Complemental strand, 7993350 - 7993123
Alignment:
Q  157 agaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttatt 256  Q
    ||||||||||||  ||||||||| || ||||||||||||||||||||||| ||||||| || || ||||||||||| |||||||||||||   |||||||    
T  7993350 agaaaaacaatctcaagaaatcttatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacacaatccatcaaaattcaatttatt 7993251  T
Q  257 aaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgaca 356  Q
    |||||||| || |||||||||||||||||||||||||  ||||       ||||||| || ||| ||||||||||||| ||||||       ||||| ||    
T  7993250 aaacaatccttcgaaatttgaatgattttgaataccataagactttttttaagtgatgaaaagttttgattgaatacctcaagacttttttaaaatggca 7993151  T
Q  357 aagactcttgattgaataccacaagact 384  Q
    |||| ||||||||||||||||| |||||    
T  7993150 aagagtcttgattgaataccacgagact 7993123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 157 - 372
Target Start/End: Complemental strand, 8675541 - 8675326
Alignment:
Q  157 agaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttatt 256  Q
    ||||||||||||  |||||||||||| ||||||| ||||| ||||||||| ||||||| || || ||||||||||||||||||||||||||  |||||||    
T  8675541 agaaaaacaatctcaagaaatctcatcttttcataaaagattttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttatt 8675442  T
Q  257 aaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgaca 356  Q
    |||||||| || ||| ||| |||||||||||||||||| ||||       ||||||| || ||||||||||||||||| ||||||       ||||||||    
T  8675441 aaacaatccttcgaagtttaaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattgaatacctcaagacttttttaaaatgaca 8675342  T
Q  357 aagactcttgattgaa 372  Q
    |||| | |||||||||    
T  8675341 aagagttttgattgaa 8675326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 194 - 295
Target Start/End: Complemental strand, 43679592 - 43679491
Alignment:
Q  194 agactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcatttgaaatttgaatgattttgaatacca 293  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||    
T  43679592 agactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaatacca 43679493  T
Q  294 ct 295  Q
    ||    
T  43679492 ct 43679491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 157 - 293
Target Start/End: Original strand, 43187349 - 43187485
Alignment:
Q  157 agaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttatt 256  Q
    ||||||||||||| || ||||||||||| ||||||||||||||||||||| |||||||||| |||||||||| ||||||| ||||||||||  |||||||    
T  43187349 agaaaaacaatcccaaaaaatctcatgtcttcatgaaagactttttcttgttaaaatttcactagaaaatccgacaaaattcatcaaaatccaatttatt 43187448  T
Q  257 aaacaatcatttgaaatttgaatgattttgaatacca 293  Q
    |||||||  ||  ||||||||||||||||||||||||    
T  43187449 aaacaatgcttcaaaatttgaatgattttgaatacca 43187485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 157 - 382
Target Start/End: Original strand, 46405433 - 46405648
Alignment:
Q  157 agaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttatt 256  Q
    ||||||||||||  |||||||||||| |||| || ||| ||||||||||| ||||||| ||          ||||||||||||||||||||  |||||||    
T  46405433 agaaaaacaatctcaagaaatctcatctttttattaaatactttttcttgttaaaattaca----------ccacaaaatccatcaaaatccaatttatt 46405522  T
Q  257 aaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgaca 356  Q
    |||||||||||||||||||||||||||||||||||||| ||||       ||||||| || ||||||||||||||||| ||||||       ||| ||||    
T  46405523 aaacaatcatttgaaatttgaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattgaatacctcaagacttttttaaaacgaca 46405622  T
Q  357 aagactcttgattgaataccacaaga 382  Q
    |||| ||||||||||||||| |||||    
T  46405623 aagagtcttgattgaataccgcaaga 46405648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 158 - 374
Target Start/End: Complemental strand, 9180077 - 9179871
Alignment:
Q  158 gaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttatta 257  Q
    |||||||||||||||||||||||||||||||||||||||||||||  |||||||| |||| |||||||||||||||||||||          ||||||||    
T  9180077 gaaaaacaatcctaagaaatctcatgttttcatgaaagacttttttatgctaaaaattcactagaaaatcccacaaaatcca----------atttatta 9179988  T
Q  258 aacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaa 357  Q
    ||||||| || | ||||| | |||||||| ||||||| ||||       ||||||| ||||||||||||||||||| |||| ||       |||||||||    
T  9179987 aacaatccttcggaatttaagtgattttgtataccacaagactttttttaagtgatgaagagtcttgattgaatacgacaaaactttttttaaatgacaa 9179888  T
Q  358 agactcttgattgaata 374  Q
    ||| |||||||||||||    
T  9179887 agaatcttgattgaata 9179871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 157 - 383
Target Start/End: Original strand, 40460709 - 40460925
Alignment:
Q  157 agaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttatt 256  Q
    ||||||||||||  |||||||||||| ||||||||||||| ||||||||| ||||||| || ||          |||||||||||||||||  |||||||    
T  40460709 agaaaaacaatctcaagaaatctcatattttcatgaaagattttttcttgttaaaattacacta----------caaaatccatcaaaatccaatttatt 40460798  T
Q  257 aaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgaca 356  Q
    ||||||||||| |||||||||||||||||||||||||| ||||       ||||||| || ||||||||||||||| | ||||||       ||||||||    
T  40460799 aaacaatcattcgaaatttgaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattgaatatctcaagacttttttaaaatgaca 40460898  T
Q  357 aagactcttgattgaataccacaagac 383  Q
    |||| |||| |||||||| ||||||||    
T  40460899 aagagtcttaattgaatatcacaagac 40460925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 159 - 384
Target Start/End: Complemental strand, 509852 - 509637
Alignment:
Q  159 aaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttattaa 258  Q
    ||||||||||  |||||||||||| ||||||||||||||||||||||| ||||||  || ||          |||||||||||||||||  |||||||||    
T  509852 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttgttaaaatcccacta----------caaaatccatcaaaatccaatttattaa 509763  T
Q  259 acaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaa 358  Q
    |||||| || |||||||||||||||||||||||||| ||||       || |||| || ||||||||||||||||| ||||||       ||||||||||    
T  509762 acaatcgttcgaaatttgaatgattttgaataccacaagactttttttaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaa 509663  T
Q  359 gactcttgattgaataccacaagact 384  Q
     | |||||||||||||||||||||||    
T  509662 tagtcttgattgaataccacaagact 509637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 157 - 374
Target Start/End: Original strand, 3797059 - 3797266
Alignment:
Q  157 agaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttatt 256  Q
    ||||||||||||||||||||||| |||||||| | |||||||||||| ||||||||||||| ||||||||||||         ||||||||| |||||||    
T  3797059 agaaaaacaatcctaagaaatct-atgttttcttaaaagactttttcatgctaaaatttcactagaaaatccca---------tcaaaatctaatttatt 3797148  T
Q  257 aaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgaca 356  Q
    |||||||| ||  |||||| |||||| ||||||||||| ||||       ||||||| || ||||||||||||||||| ||||||       ||||||||    
T  3797149 aaacaatccttcaaaattttaatgatcttgaataccacaagactttttttaagtgatgaaaagtcttgattgaatacctcaagacttttttaaaatgaca 3797248  T
Q  357 aagactcttgattgaata 374  Q
    |||| |||||||||||||    
T  3797249 aagagtcttgattgaata 3797266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 160 - 384
Target Start/End: Complemental strand, 19251734 - 19251520
Alignment:
Q  160 aaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttattaaa 259  Q
    |||| ||||| ||||||| ||| |||||||||||||||||||| ||||||||||||||  |||||||||  |||||||||          ||||||||||    
T  19251734 aaaataatcccaagaaatttcaggttttcatgaaagactttttattgctaaaatttcacaagaaaatccatcaaaatcca----------atttattaaa 19251645  T
Q  260 caatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaag 359  Q
    ||||| || |||||||||||||||||||||||||| ||||       ||||||| || | | ||||||||||||| ||||||       |||||||||||    
T  19251644 caatccttcgaaatttgaatgattttgaataccacgagactttttttaagtgatgaaaaattttgattgaatacctcaagacttttttaaaatgacaaag 19251545  T
Q  360 actcttgattgaataccacaagact 384  Q
    | |||||||||||||||||||||||    
T  19251544 agtcttgattgaataccacaagact 19251520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 232 - 384
Target Start/End: Complemental strand, 31639015 - 31638863
Alignment:
Q  232 aaaatccatcaaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaat 331  Q
    ||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||       |||||||||||||||||||| ||||    
T  31639015 aaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgatagaat 31638916  T
Q  332 accacaagacnnnnnnnaaatgacaaagactcttgattgaataccacaagact 384  Q
    ||||||  |        |||||||||||| | ||||||||||| |||||||||    
T  31638915 accacacaagtttttttaaatgacaaagaattttgattgaataacacaagact 31638863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 157 - 384
Target Start/End: Complemental strand, 37328125 - 37327908
Alignment:
Q  157 agaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttatt 256  Q
    ||||||||||||  || |||||| || ||||||||||||||||||| ||| |||||||          || | |||||||||||||||||   |||||||    
T  37328125 agaaaaacaatctcaaaaaatcttatcttttcatgaaagacttttttttgttaaaatt----------atactacaaaatccatcaaaattcaatttatt 37328036  T
Q  257 aaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgaca 356  Q
    |||||||| ||||||||||||||||||||||||||||| ||||       |||| || || ||||||||||||||||| ||||||       ||||||||    
T  37328035 aaacaatcctttgaaatttgaatgattttgaataccacaagactttttttaagtaatgaaaagtcttgattgaatacctcaagacttttttaaaatgaca 37327936  T
Q  357 aagactcttgattgaataccacaagact 384  Q
    |||| |||||||||||||||||||||||    
T  37327935 aagagtcttgattgaataccacaagact 37327908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 157 - 380
Target Start/End: Original strand, 44121902 - 44122115
Alignment:
Q  157 agaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttatt 256  Q
    ||||||||||||  || ||||||||| ||||||| ||||||||||||||| ||||||| || ||          |||||||||||||||||  |||||||    
T  44121902 agaaaaacaatctcaaaaaatctcatcttttcattaaagactttttcttgttaaaattacacta----------caaaatccatcaaaatccaatttatt 44121991  T
Q  257 aaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgaca 356  Q
    |||||||| || |||||||||||||||||||||||||| |||        ||||||| || ||||||||||||||||| ||||||       ||||||||    
T  44121992 aaacaatccttcgaaatttgaatgattttgaataccacaagattttttttaagtgatgaaaagtcttgattgaatacctcaagacttttttaaaatgaca 44122091  T
Q  357 aagactcttgattgaataccacaa 380  Q
    |||| |||||||||||||||||||    
T  44122092 aagagtcttgattgaataccacaa 44122115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 183 - 384
Target Start/End: Complemental strand, 727692 - 727500
Alignment:
Q  183 gttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcatttgaaatttgaatgat 282  Q
    ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||          ||||||||||||||||| |||||||||||||||||    
T  727692 gttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatc----------tgatttattaaacaatcctttgaaatttgaatgat 727603  T
Q  283 tttgaataccactaga-cnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagactcttgattgaataccacaag 381  Q
    ||||||||| ||||||         ||||||| |||||| ||||||||||| ||||||||       |||||||||||| | ||||||||||| ||||||    
T  727602 tttgaatactactagatttttttttaagtgataaagagttttgattgaatatcacaagactttttttaaatgacaaagaattttgattgaataacacaag 727503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 157 - 384
Target Start/End: Original strand, 44256758 - 44256985
Alignment:
Q  157 agaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttatt 256  Q
    ||||||||||||  || ||||||||| |||| |||||| ||||||||||| ||||||| || |  ||||||| ||||||| |||| |||||  |||||||    
T  44256758 agaaaaacaatctcaaaaaatctcatattttgatgaaaaactttttcttgttaaaattacactgcaaaatccaacaaaattcatccaaatccaatttatt 44256857  T
Q  257 aaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgaca 356  Q
    ||||||||||| |||||||||||||||||||||||||| | ||       ||||||| || |||||||||||||||||  ||||        ||||||||    
T  44256858 aaacaatcattcgaaatttgaatgattttgaataccacgatactttttttaagtgatgaaaagtcttgattgaataccttaagatttttttaaaatgaca 44256957  T
Q  357 aagactcttgattgaataccacaagact 384  Q
    || | |||||||| ||||| ||||||||    
T  44256958 aaaagtcttgattaaatactacaagact 44256985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 199 - 384
Target Start/End: Complemental strand, 32883948 - 32883763
Alignment:
Q  199 ttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactaga 298  Q
    |||||||| ||||||| || || |||||||||| |||||||||||||||  ||||| |||||||||||| |||||||||||||||||||||||||| |||    
T  32883948 ttttcttgttaaaattacactacaaaatcccacgaaatccatcaaaatccaatttaataaacaatcattcgaaatttgaatgattttgaataccacaaga 32883849  T
Q  299 cnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagactcttgattgaataccacaagact 384  Q
    |       ||||||| || |||||| |||||||||  ||||||       |||||||||| | |||||||||||||||| ||||||    
T  32883848 ctttttttaagtgatgaaaagtcttaattgaatacttcaagacttttttaaaatgacaaaaagtcttgattgaataccataagact 32883763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 142 - 294
Target Start/End: Original strand, 1470213 - 1470362
Alignment:
Q  142 gtaaaatcttaaaagagaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatc 241  Q
    |||||||||||||||| ||||||||| ||| ||||||||  |||||||  ||||| |||||| ||||||||||| || |||||||||||||||| | |||    
T  1470213 gtaaaatcttaaaagaaaaaaacaatgctaggaaatctc--gttttcaaaaaagattttttcatgctaaaattttatcagaaaatcccacaaaa-ctatc 1470309  T
Q  242 aaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccac 294  Q
    ||||||| ||| ||||||||||  ||| ||||||||| |||||||||||||||    
T  1470310 aaaatctaattcattaaacaatgctttaaaatttgaacgattttgaataccac 1470362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 159 - 290
Target Start/End: Complemental strand, 19810995 - 19810874
Alignment:
Q  159 aaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttattaa 258  Q
    ||||||||||  ||||||||||||||||||||||||||| ||||  ||||||||||||| |||||||| ||||||||||||          |||||||||    
T  19810995 aaaaacaatctcaagaaatctcatgttttcatgaaagacatttttatgctaaaatttcactagaaaattccacaaaatcca----------atttattaa 19810906  T
Q  259 acaatcatttgaaatttgaatgattttgaata 290  Q
    ||||||||||||||||||||||||||||||||    
T  19810905 acaatcatttgaaatttgaatgattttgaata 19810874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 157 - 279
Target Start/End: Original strand, 37972859 - 37972981
Alignment:
Q  157 agaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttatt 256  Q
    ||||||||||||  ||||| |||||| ||||||||||||||||||||||| ||||||| || || |||||||| |||||||||||||||||  |||||||    
T  37972859 agaaaaacaatctcaagaagtctcatcttttcatgaaagactttttcttgttaaaattacactataaaatcccgcaaaatccatcaaaatccaatttatt 37972958  T
Q  257 aaacaatcatttgaaatttgaat 279  Q
    ||| |||| || |||||||||||    
T  37972959 aaataatccttcgaaatttgaat 37972981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 195 - 294
Target Start/End: Complemental strand, 25805862 - 25805763
Alignment:
Q  195 gactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccac 294  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||||| |||   ||||||||||||||| |  ||||||||||||||||||||||||||    
T  25805862 gactttttcatgctaaaattttattagaaaatcccacaaaatccatcataattcaatttattaaacaatcctacgaaatttgaatgattttgaataccac 25805763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 157 - 264
Target Start/End: Complemental strand, 41827512 - 41827405
Alignment:
Q  157 agaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttatt 256  Q
    ||||||||||||  |||||||||||| |||||||||||||| |||||||| ||||||| || || | ||||||||||||||||||||||||  |||||||    
T  41827512 agaaaaacaatctcaagaaatctcatattttcatgaaagacattttcttgttaaaattacactacacaatcccacaaaatccatcaaaatccaatttatt 41827413  T
Q  257 aaacaatc 264  Q
    ||||||||    
T  41827412 aaacaatc 41827405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 208 - 382
Target Start/End: Original strand, 10676463 - 10676637
Alignment:
Q  208 taaaatttcattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnna 307  Q
    ||||||||||  ||||||| ||| |||||||||| |||||  ||||||||||||||| || ||||||||||||||||||||||| |  ||||       |    
T  10676463 taaaatttcacaagaaaattccataaaatccatccaaatccaatttattaaacaatccttcgaaatttgaatgattttgaatacaatgagacttttttta 10676562  T
Q  308 agtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagactcttgattgaataccacaaga 382  Q
    |||||| || ||||||||||||||||||||||||       ||||  |||||| |||||||| ||||||||||||    
T  10676563 agtgatgaaaagtcttgattgaataccacaagaccttttttaaattgcaaagagtcttgattaaataccacaaga 10676637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 157 - 380
Target Start/End: Complemental strand, 29585712 - 29585500
Alignment:
Q  157 agaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttatt 256  Q
    ||||||||||||  ||||||| |||| |||| |||||||||||||||||| ||||||| || ||          |||||||||||||||||  | |||||    
T  29585712 agaaaaacaatctcaagaaatttcatctttttatgaaagactttttcttgttaaaattacacta----------caaaatccatcaaaatccaaattatt 29585623  T
Q  257 aaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgaca 356  Q
    |||||||| ||  ||||||||||||||||||||||||  ||||       |||||| ||| ||| ||||||||||||| ||||||       ||||||||    
T  29585622 aaacaatccttcaaaatttgaatgattttgaataccagaagactttttttaagtga-taaaagttttgattgaatacctcaagacttttttaaaatgaca 29585524  T
Q  357 aagactcttgattgaataccacaa 380  Q
    |||| |||||||||||||||||||    
T  29585523 aagaatcttgattgaataccacaa 29585500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 230 - 382
Target Start/End: Complemental strand, 39028232 - 39028080
Alignment:
Q  230 acaaaatccatcaaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 329  Q
    ||||||||||||||||||  ||||||||||||||| || | |||||||| ||||||||||| ||| ||||       ||||||| || ||||||||||||    
T  39028232 acaaaatccatcaaaatccaatttattaaacaatctttcgtaatttgaacgattttgaataacacaagactttttttaagtgatgaaaagtcttgattga 39028133  T
Q  330 ataccacaagacnnnnnnnaaatgacaaagactcttgattgaataccacaaga 382  Q
    ||| | ||||||       |||||||||||| |||||||||||||||||||||    
T  39028132 atatctcaagacttttttaaaatgacaaagagtcttgattgaataccacaaga 39028080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 174 - 376
Target Start/End: Original strand, 33892269 - 33892461
Alignment:
Q  174 aaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcatttgaaat 273  Q
    ||||||||| |||| |||||||||||||||||| ||||||| || ||          |||||| ||| ||||||  ||||||| |||||||||| |||||    
T  33892269 aaatctcatcttttaatgaaagactttttcttgttaaaattacacta----------caaaattcataaaaatccaatttatttaacaatcattcgaaat 33892358  T
Q  274 ttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagactcttgattgaat 373  Q
    ||||||||||||||||||||| ||||       ||||||| || ||||||||||||||||| ||||||       |||||||||||| | ||||||||||    
T  33892359 ttgaatgattttgaataccacaagactttgtttaagtgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtgttgattgaat 33892458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 241 - 384
Target Start/End: Original strand, 17001099 - 17001242
Alignment:
Q  241 caaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaaga 340  Q
    |||||||  ||||||||||||||| || |||||||||||||||||||||||||| | |        ||||||| || |||||| |||||||||| |||||    
T  17001099 caaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacgatattttttttaagtgatgaaaagtctttattgaatacctcaaga 17001198  T
Q  341 cnnnnnnnaaatgacaaagactcttgattgaataccacaagact 384  Q
    |       |||||||||||| |||||||||||||||||||||||    
T  17001199 ctttttaaaaatgacaaagagtcttgattgaataccacaagact 17001242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 174 - 380
Target Start/End: Original strand, 44623295 - 44623491
Alignment:
Q  174 aaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcatttgaaat 273  Q
    |||| |||| |||| |||| |||||||||| | ||||||||||| |||||||| ||||||||| ||          |||||||||||| || || |||||    
T  44623295 aaatatcatatttttatgagagactttttcattctaaaatttcactagaaaattccacaaaattca----------atttattaaacagtctttagaaat 44623384  T
Q  274 ttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagactcttgattgaat 373  Q
     |||||||||||||||| ||| ||||       ||||||| ||||||||||||| |||||||||||||       |||||||||||| ||||||||||||    
T  44623385 atgaatgattttgaatatcacgagacctttttaaagtgatgaagagtcttgattaaataccacaagactttttttaaatgacaaagagtcttgattgaat 44623484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 141 - 259
Target Start/End: Complemental strand, 10617141 - 10617024
Alignment:
Q  141 agtaaaatcttaaaagagaaaaacaatcctaagaaatctc-atgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatcca 239  Q
    |||||||| ||||||||  ||| |||||| || ||||||  ||||||| ||||||||||| || || ||||||| ||| ||||||||| |||||||||||    
T  10617141 agtaaaattttaaaaga--aaagcaatcccaaaaaatctttatgtttttatgaaagacttgttattactaaaatatcactagaaaatctcacaaaatcca 10617044  T
Q  240 tcaaaatctgatttattaaa 259  Q
    ||||||||| ||||||||||    
T  10617043 tcaaaatctaatttattaaa 10617024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 140 - 191
Target Start/End: Complemental strand, 31639082 - 31639031
Alignment:
Q  140 tagtaaaatcttaaaagagaaaaacaatcctaagaaatctcatgttttcatg 191  Q
    |||||||||||||||||| ||||||||||||||||||| |||||||||||||    
T  31639082 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatatcatgttttcatg 31639031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 235 - 294
Target Start/End: Complemental strand, 447913 - 447854
Alignment:
Q  235 atccatcaaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccac 294  Q
    |||||||||||||  ||| |||||||||||||| ||||||||||||||||| ||||||||    
T  447913 atccatcaaaatccaattaattaaacaatcattcgaaatttgaatgattttaaataccac 447854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 241 - 299
Target Start/End: Complemental strand, 47066828 - 47066770
Alignment:
Q  241 caaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagac 299  Q
    |||||||  ||||||||||||||| || |||||||||||||||||||||||||| ||||    
T  47066828 caaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagac 47066770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 269 - 384
Target Start/End: Complemental strand, 29893177 - 29893062
Alignment:
Q  269 gaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagactcttgat 368  Q
    ||||||||||| ||||| ||||| || ||||       ||||||| || ||||||||||||||||| || |||       |||||||||||| |||||||    
T  29893177 gaaatttgaattattttaaatactacaagactttttttaagtgatgaaaagtcttgattgaatacctcatgactgttttaaaatgacaaagagtcttgat 29893078  T
Q  369 tgaataccacaagact 384  Q
    ||||||||||||||||    
T  29893077 tgaataccacaagact 29893062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 318 - 384
Target Start/End: Original strand, 48117746 - 48117812
Alignment:
Q  318 agtcttgattgaataccacaagacnnnnnnnaaatgacaaagactcttgattgaataccacaagact 384  Q
    ||||||||||||||||| ||||||       |||||||||||| |||||||||||||||||||||||    
T  48117746 agtcttgattgaatacctcaagacttttcaaaaatgacaaagagtcttgattgaataccacaagact 48117812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 171 - 206
Target Start/End: Original strand, 17001049 - 17001084
Alignment:
Q  171 aagaaatctcatgttttcatgaaagactttttcttg 206  Q
    |||||||||||| |||||||||||||||||||||||    
T  17001049 aagaaatctcatattttcatgaaagactttttcttg 17001084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 311 - 340
Target Start/End: Complemental strand, 8078457 - 8078428
Alignment:
Q  311 gattaagagtcttgattgaataccacaaga 340  Q
    ||||||||||||||||||||||||||||||    
T  8078457 gattaagagtcttgattgaataccacaaga 8078428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 228
Target Start/End: Complemental strand, 47066878 - 47066821
Alignment:
Q  171 aagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcc 228  Q
    |||||||||||| ||||||||||| | ||||||||| ||||||| || || |||||||    
T  47066878 aagaaatctcatcttttcatgaaatattttttcttgttaaaattacactacaaaatcc 47066821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 315 - 384
Target Start/End: Original strand, 43187535 - 43187604
Alignment:
Q  315 aagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagactcttgattgaataccacaagact 384  Q
    |||||| || ||||||||||| |||||       |||| ||||||| |||||||||||||||||||||||    
T  43187535 aagagttttaattgaataccataagactttttttaaattacaaagagtcttgattgaataccacaagact 43187604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 164; Significance: 1e-87; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 143 - 384
Target Start/End: Complemental strand, 21147294 - 21147054
Alignment:
Q  143 taaaatcttaaaagagaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatca 242  Q
    |||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  21147294 taaaatcttaaa-gaaaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatca 21147196  T
Q  243 aaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacn 342  Q
    |||||||||||||||||||||| || |||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||     
T  21147195 aaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaagact 21147096  T
Q  343 nnnnnnaaatgacaaagactcttgattgaataccacaagact 384  Q
          |||||||||||| ||||||||||||| |||||||||    
T  21147095 ttttttaaatgacaaagaatcttgattgaataacacaagact 21147054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 140 - 384
Target Start/End: Original strand, 7016714 - 7016958
Alignment:
Q  140 tagtaaaatcttaaaagagaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatcca 239  Q
    |||||||||||||||||| ||||||||| ||||||||||||||||||| ||||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  7016714 tagtaaaatcttaaaagaaaaaaacaattctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 7016813  T
Q  240 tcaaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 339  Q
    ||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||| |||||    
T  7016814 tcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaatactacaag 7016913  T
Q  340 acnnnnnnnaaatgacaaagactcttgattgaataccacaagact 384  Q
    ||       ||||   ||||| |||||||||||||||||||||||    
T  7016914 actttttttaaattgaaaagagtcttgattgaataccacaagact 7016958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 140 - 384
Target Start/End: Original strand, 33656017 - 33656262
Alignment:
Q  140 tagtaaaatcttaaaagagaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatcca 239  Q
    |||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  33656017 tagtaaaatcttaaaaga-aaaaacaatcctaagaaatctcatattttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 33656115  T
Q  240 tcaaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 339  Q
    ||||||||||||||||||||||||| || ||||||||||||||||||||||||| ||||        |||||||||||||||||||||||||||||||||    
T  33656116 tcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccattagattttttttaagtgattaagagtcttgattgaataccacaag 33656215  T
Q  340 acnnnnnnnaaatgac--aaagactcttgattgaataccacaagact 384  Q
    ||       |||||||  ||||| ||||||||||||| |||||||||    
T  33656216 actttttttaaatgacaaaaagaatcttgattgaataacacaagact 33656262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 140 - 384
Target Start/End: Original strand, 5272894 - 5273138
Alignment:
Q  140 tagtaaaatcttaaaagagaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatcca 239  Q
    ||||||||| |||||||  ||||||||   |||||||||||||||||| ||||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  5272894 tagtaaaattttaaaagtaaaaaacaaaattaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 5272993  T
Q  240 tcaaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 339  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||       || |||||||||||||||||||||||||| |||    
T  5272994 tcaaaatctgatttattaaacaatcattcgaaatttgaatgattttgaataccactagactttttttaaatgattaagagtcttgattgaataccataag 5273093  T
Q  340 acnnnnnnnaaatgacaaagactcttgattgaataccacaagact 384  Q
    ||       |||||||||||| ||||||||||||| |||||||||    
T  5273094 actttttttaaatgacaaagaatcttgattgaatagcacaagact 5273138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 140 - 384
Target Start/End: Original strand, 27458925 - 27459168
Alignment:
Q  140 tagtaaaatcttaaaagagaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatcca 239  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||||||||||| || |||||| ||||||||||||| |||||||||||||||||||||    
T  27458925 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatatcatgttttcatgaatgattttttcatgctaaaatttcactagaaaatcccacaaaatcca 27459024  T
Q  240 tcaaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 339  Q
    ||||||||| ||||||||||||||| ||  |||| |||||||||||||||||||||||||       ||||||||||||||||||||||||||| |||||    
T  27459025 tcaaaatctaatttattaaacaatccttcaaaatctgaatgattttgaataccactagac-ttttttaagtgattaagagtcttgattgaatactacaag 27459123  T
Q  340 acnnnnnnnaaatgacaaagactcttgattgaataccacaagact 384  Q
    ||       |||||||||||| |||| |||||||| |||||||||    
T  27459124 actttttttaaatgacaaagaatcttaattgaataacacaagact 27459168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 140 - 384
Target Start/End: Original strand, 32157869 - 32158117
Alignment:
Q  140 tagtaaaatcttaaaagagaaaaacaatcctaagaaatctcatgttttcatgaaagact---ttttcttgctaaaatttcattagaaaatcccacaaaat 236  Q
    |||||||||||||||||| || ||||||  |||||||||||||||||||||||||||||   ||||| ||||||||||| | ||||||||||||||||||    
T  32157869 tagtaaaatcttaaaagaaaagaacaattttaagaaatctcatgttttcatgaaagactattttttcgtgctaaaattttactagaaaatcccacaaaat 32157968  T
Q  237 ccatcaaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagac-nnnnnnnaagtgattaagagtcttgattgaatacca 335  Q
    || ||||||||| ||||||||||||||| || |||||||||||||||||||||||||||||||        ||||||||| | |||||||||||||||||    
T  32157969 ccgtcaaaatctaatttattaaacaatccttcgaaatttgaatgattttgaataccactagacttttttttaagtgattaggggtcttgattgaatacca 32158068  T
Q  336 caagacnnnnnnnaaatgacaaagactcttgattgaataccacaagact 384  Q
    ||||||       |||||||||||| ||||||||||||| |||||||||    
T  32158069 caagactttttttaaatgacaaagaatcttgattgaataacacaagact 32158117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 141 - 380
Target Start/End: Complemental strand, 139504 - 139264
Alignment:
Q  141 agtaaaatcttaaaagagaaaaac-aatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatcca 239  Q
    ||||||||||||||||| |||||  |||  |||||||||||||||||| ||||||||||||||| |  |||||||||| | |||||||| ||||||||||    
T  139504 agtaaaatcttaaaagaaaaaaaataattttaagaaatctcatgtttttatgaaagactttttcatattaaaatttcactggaaaatccaacaaaatcca 139405  T
Q  240 tcaaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 339  Q
    |||||||||| |||||||||||||| || |||||||||||||||||||||||||||||||       |||||||||| |||||||||||||||||||| |    
T  139404 tcaaaatctggtttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaaaagtcttgattgaataccacatg 139305  T
Q  340 acnnnnnnnaaatgacaaagactcttgattgaataccacaa 380  Q
    ||       |||||||||||| ||||||||||||| |||||    
T  139304 actttttttaaatgacaaagaatcttgattgaataacacaa 139264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 157 - 384
Target Start/End: Original strand, 1152095 - 1152322
Alignment:
Q  157 agaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttatt 256  Q
    |||||||||||| ||||||||||||| ||||||| ||||||||||||||| ||||||| || || ||||||||||||||||||||||||||  |||||||    
T  1152095 agaaaaacaatcttaagaaatctcatcttttcataaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttatt 1152194  T
Q  257 aaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgaca 356  Q
    ||||||||  | |||||||||||||||||||||||||| ||||       ||||||| || ||||||||||||||||| ||||||       ||||||||    
T  1152195 aaacaatccctcgaaatttgaatgattttgaataccacaagactttttttaagtgataaaaagtcttgattgaatacctcaagacttttttaaaatgaca 1152294  T
Q  357 aagactcttgattgaataccacaagact 384  Q
    |||| |||||||||||||||||||||||    
T  1152295 aagagtcttgattgaataccacaagact 1152322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 140 - 341
Target Start/End: Complemental strand, 849370 - 849177
Alignment:
Q  140 tagtaaaatcttaaaagagaaaaacaatcctaagaaatctcatgtttt-catgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatcc 238  Q
    |||||||||||||||||| ||||||||||||         |||||||| |||||||||||||||| ||||||||||||| |||||||||||||||||||     
T  849370 tagtaaaatcttaaaagaaaaaaacaatcct---------catgtttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatct 849280  T
Q  239 atcaaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaa 338  Q
    |||||||||||||||||||||||||| || ||||||||||||||||||||||||| |||||       ||||||||||||||||||||||||||||||||    
T  849279 atcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccattagactttttttaagtgattaagagtcttgattgaataccacaa 849180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 159 - 382
Target Start/End: Original strand, 14000099 - 14000322
Alignment:
Q  159 aaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttattaa 258  Q
    ||||||||||  |||||||||||| ||||||||||||||||||||||| ||||||| || || ||||||||||||||||||||||||||  |||||||||    
T  14000099 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaa 14000198  T
Q  259 acaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaa 358  Q
    |||||| ||  ||||||||||||||||||||||||| ||||       || |||| || ||||||||||||||||| ||||||       ||||||||||    
T  14000199 acaatccttcaaaatttgaatgattttgaataccacaagactttttttaaatgatgaaaagtcttgattgaatacctcaagactttttaaaaatgacaaa 14000298  T
Q  359 gactcttgattgaataccacaaga 382  Q
    || |||||||||||||||||||||    
T  14000299 gagtcttgattgaataccacaaga 14000322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 159 - 384
Target Start/End: Original strand, 4550251 - 4550476
Alignment:
Q  159 aaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttattaa 258  Q
    ||||||||||  || ||||||||| ||||||||||||||| ||||||| ||||||| || || ||||| ||||||||||||||||||||  |||||||||    
T  4550251 aaaaacaatctcaacaaatctcatcttttcatgaaagactctttcttgttaaaattacactacaaaattccacaaaatccatcaaaatccaatttattaa 4550350  T
Q  259 acaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaa 358  Q
    |||||| || |||||||||||||||||||||||||| ||||       ||||||| || ||||||||||||||||| |||| |       ||||||||||    
T  4550351 acaatccttcgaaatttgaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattgaatacctcaagcctttgttaaaatgacaaa 4550450  T
Q  359 gactcttgattgaataccacaagact 384  Q
    || |||||||||||||||||||||||    
T  4550451 gagtcttgattgaataccacaagact 4550476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 157 - 380
Target Start/End: Complemental strand, 13926145 - 13925922
Alignment:
Q  157 agaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttatt 256  Q
    ||||||||||||  ||||||| |||| ||||| ||||||||||||||||| ||||||| || || ||||||||||||||||||||||||||  |||||||    
T  13926145 agaaaaacaatctcaagaaatatcatcttttcttgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttatt 13926046  T
Q  257 aaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgaca 356  Q
    |||||||| || |||||||||||||||||||||||||| ||||       |||| || || | ||||||||||||||| ||||||       ||||||||    
T  13926045 aaacaatccttcgaaatttgaatgattttgaataccacaagactttttttaagtaatgaaaaatcttgattgaatacctcaagacttttttaaaatgaca 13925946  T
Q  357 aagactcttgattgaataccacaa 380  Q
    |||| |||||||||||||||||||    
T  13925945 aagagtcttgattgaataccacaa 13925922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 140 - 384
Target Start/End: Complemental strand, 6461008 - 6460779
Alignment:
Q  140 tagtaaaatcttaaaagagaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatcca 239  Q
    |||||||||||||||| | |||||||||| ||||||||||||| |||||||||               |||||||||| ||||||||||| |||||||||    
T  6461008 tagtaaaatcttaaaaaaaaaaaacaatcttaagaaatctcattttttcatga---------------taaaatttcactagaaaatccctcaaaatcca 6460924  T
Q  240 tcaaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 339  Q
    ||||||||||||||||||||||| | || ||||||||||||||||||||||||||||||        || |||||||||||||||||||||||| ||| |    
T  6460923 tcaaaatctgatttattaaacaaaccttcgaaatttgaatgattttgaataccactagattttttttaaatgattaagagtcttgattgaatacgacatg 6460824  T
Q  340 acnnnnnnnaaatgacaaagactcttgattgaataccacaagact 384  Q
    ||       |||||||||||| ||||||||||||| || ||||||    
T  6460823 actttttttaaatgacaaagaatcttgattgaataacataagact 6460779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 157 - 371
Target Start/End: Original strand, 7947565 - 7947779
Alignment:
Q  157 agaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttatt 256  Q
    |||||||||||   |||||||||| | ||||||||||||||||||||||| ||||||| || || ||||| ||||||||||||||||||||  |||||||    
T  7947565 agaaaaacaatttcaagaaatctcttcttttcatgaaagactttttcttgttaaaattacactacaaaattccacaaaatccatcaaaatccaatttatt 7947664  T
Q  257 aaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgaca 356  Q
    |||||||| || |||||||||||||||||||||| | | ||||       ||||||| || ||||||||||||||||| ||||||       ||||||||    
T  7947665 aaacaatccttcgaaatttgaatgattttgaatatcgcaagactttttttaagtgatgaaaagtcttgattgaatacctcaagacttttttaaaatgaca 7947764  T
Q  357 aagactcttgattga 371  Q
    |||| ||||||||||    
T  7947765 aagagtcttgattga 7947779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 143 - 336
Target Start/End: Complemental strand, 9689884 - 9689693
Alignment:
Q  143 taaaatcttaaaagagaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatca 242  Q
    ||||||||||||||| |||||||||| |||||||||| ||||||| ||||||||||||||| |  |||||||| |  |||||||| |||| |||||||||    
T  9689884 taaaatcttaaaaga-aaaaacaatcataagaaatcttatgtttttatgaaagactttttcataataaaattttacaagaaaatctcacacaatccatca 9689786  T
Q  243 aaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccac 336  Q
    |||||| |||||| ||||||||||| ||||||| ||||||||| |||||||| ||||       ||||||| ||||||||||||||||||||||    
T  9689785 aaatctaatttatcaaacaatcattcgaaattt-aatgattttaaataccacaagactttttttaagtgatgaagagtcttgattgaataccac 9689693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 159 - 341
Target Start/End: Complemental strand, 39852557 - 39852375
Alignment:
Q  159 aaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttattaa 258  Q
    ||||||||||  |||||||||||| ||||||||||||||||||||||| ||||||| || || ||||||||| ||||||||||||||||  ||||| |||    
T  39852557 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccataaaatccatcaaaatccaatttagtaa 39852458  T
Q  259 acaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagac 341  Q
    |||||| || |||||||||||||||||||||||||| ||||       || |||| |  ||||||||||||||||| ||||||    
T  39852457 acaatccttcgaaatttgaatgattttgaataccacaagactttttttaaatgatgagaagtcttgattgaatacctcaagac 39852375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 157 - 382
Target Start/End: Original strand, 4240454 - 4240669
Alignment:
Q  157 agaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttatt 256  Q
    ||||||||||||  |||||||||||| | ||||||||||||||||||||| ||||||| || ||          |||||||||||||||||  |||||||    
T  4240454 agaaaaacaatctcaagaaatctcatctattcatgaaagactttttcttgttaaaattacacta----------caaaatccatcaaaatccaatttatt 4240543  T
Q  257 aaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgaca 356  Q
    |||||||| || |||||||||||||||||||||||||| ||||       ||||||| || ||||||||||||||||| ||||||       ||||||||    
T  4240544 aaacaatccttcgaaatttgaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattgaatacctcaagacttttttaaaatgaca 4240643  T
Q  357 aagactcttgattgaataccacaaga 382  Q
    |||| |||||||||||||||||||||    
T  4240644 aagagtcttgattgaataccacaaga 4240669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 158 - 384
Target Start/End: Complemental strand, 22746502 - 22746284
Alignment:
Q  158 gaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttatta 257  Q
    ||||||||||| |||||||||| || ||||||||||||| ||||||||| ||||||| |||        ||||||||||||||||||||   ||||||||    
T  22746502 gaaaaacaatcttaagaaatcttatcttttcatgaaagagtttttcttgttaaaattacat--------cccacaaaatccatcaaaattcaatttatta 22746411  T
Q  258 aacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaa 357  Q
    |||||||||| |||||||||||||||||||||| ||| ||||       ||||||| || ||| ||||||||||||| ||||||       |||||||||    
T  22746410 aacaatcattcgaaatttgaatgattttgaatatcacaagactttttttaagtgatgaaaagttttgattgaatacctcaagacttttttaaaatgacaa 22746311  T
Q  358 agactcttgattgaataccacaagact 384  Q
    ||| | |||||||||||||||||||||    
T  22746310 agagttttgattgaataccacaagact 22746284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 157 - 384
Target Start/End: Original strand, 1461140 - 1461357
Alignment:
Q  157 agaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttatt 256  Q
    ||||||||||||  |||||||||||| ||||||||||||| ||||||||| ||||||| || ||          |||||||||||||||||  |||||||    
T  1461140 agaaaaacaatctcaagaaatctcatcttttcatgaaagattttttcttgttaaaattacagta----------caaaatccatcaaaatccaatttatt 1461229  T
Q  257 aaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgaca 356  Q
    |||||||| || |||||||||||||||||||||| | | ||||       ||||||| || ||||||||||||||||| ||||||       |||| |||    
T  1461230 aaacaatccttcgaaatttgaatgattttgaatagcgcaagactttttttaagtgatgaaaagtcttgattgaatacctcaagacttttttaaaattaca 1461329  T
Q  357 aagactcttgattgaataccacaagact 384  Q
    |||| |||||||||||||||||||||||    
T  1461330 aagagtcttgattgaataccacaagact 1461357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 157 - 384
Target Start/End: Complemental strand, 5949312 - 5949096
Alignment:
Q  157 agaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttatt 256  Q
    ||||||||||||  |||||||||||| ||||||||||||||||||||||| ||||||| || ||          |||||||||||||||||  |||||||    
T  5949312 agaaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacacta----------caaaatccatcaaaatccaatttatt 5949223  T
Q  257 aaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgaca 356  Q
    |||||||| || |||||||||||||||||||||||||| |||        ||||||| || | | ||||||||||||| ||||||       ||||||||    
T  5949222 aaacaatccttcgaaatttgaatgattttgaataccacaaga-tttttttaagtgatgaaaaattttgattgaatacctcaagacttttttaaaatgaca 5949124  T
Q  357 aagactcttgattgaataccacaagact 384  Q
    |||| |||||||||||||||||||||||    
T  5949123 aagagtcttgattgaataccacaagact 5949096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 205 - 376
Target Start/End: Original strand, 14465267 - 14465438
Alignment:
Q  205 tgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnn 304  Q
    ||||||||| | | |||||||| ||||||||| |||||||||| |||||||||||||||| || |||||||||||||||||||||||||| ||||         
T  14465267 tgctaaaatattactagaaaattccacaaaattcatcaaaatccgatttattaaacaatctttcgaaatttgaatgattttgaataccacaagacttttt 14465366  T
Q  305 nnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagactcttgattgaatacc 376  Q
      ||| ||| ||||||||||||||||||||| || ||       |||||||||||| |||||||||||||||    
T  14465367 ttaagcgatgaagagtcttgattgaataccagaaaactttttttaaatgacaaagagtcttgattgaatacc 14465438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 159 - 384
Target Start/End: Original strand, 40013706 - 40013921
Alignment:
Q  159 aaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttattaa 258  Q
    ||||||||||  |||||||||||| ||||||||||||||||||||||| ||||||| ||          | ||||||||||| ||||||  ||| |||||    
T  40013706 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattaca----------ctacaaaatccattaaaatccaattgattaa 40013795  T
Q  259 acaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaa 358  Q
    |||||| || |||||||||||||||||||||| ||| |||        || |||| || ||||||||||||||||| ||||||       ||||||||||    
T  40013796 acaatccttcgaaatttgaatgattttgaataacacaagattttttttaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaa 40013895  T
Q  359 gactcttgattgaataccacaagact 384  Q
    || |||||||||||||||||||||||    
T  40013896 gagtcttgattgaataccacaagact 40013921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 143 - 374
Target Start/End: Original strand, 9220696 - 9220916
Alignment:
Q  143 taaaatcttaaaagagaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatca 242  Q
    ||||||||||||||| ||||||||||||||||||| ||||||||||| ||||||||||||| || |||||||| | || ||||||| |          ||    
T  9220696 taaaatcttaaaaga-aaaaacaatcctaagaaatatcatgttttcacgaaagactttttcgtgttaaaattttactataaaatccta----------ca 9220784  T
Q  243 aaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacn 342  Q
    || ||| ||| ||||||||||| || |||||||||||||||||||||| ||  ||||       ||||||| |||||||||||||||||| ||||||||     
T  9220785 aattctaattcattaaacaatccttagaaatttgaatgattttgaatatcataagactttttttaagtgataaagagtcttgattgaatatcacaagact 9220884  T
Q  343 nnnnnnaaatgacaaagactcttgattgaata 374  Q
          |||||||||||| | |||||||||||    
T  9220885 ttttctaaatgacaaagagttttgattgaata 9220916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 241 - 384
Target Start/End: Complemental strand, 37014044 - 37013901
Alignment:
Q  241 caaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaaga 340  Q
    |||||||  ||||||||||||| | || |||||||||||||||||||||||| | ||||       ||||||| || ||||||||||||||||| |||||    
T  37014044 caaaatccaatttattaaacaacccttcgaaatttgaatgattttgaataccgcaagactttttttaagtgatgaaaagtcttgattgaatacctcaaga 37013945  T
Q  341 cnnnnnnnaaatgacaaagactcttgattgaataccacaagact 384  Q
    |       |||||||||||| |||||||||||||||||||||||    
T  37013944 ctttttaaaaatgacaaagagtcttgattgaataccacaagact 37013901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 157 - 214
Target Start/End: Complemental strand, 37014108 - 37014051
Alignment:
Q  157 agaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatt 214  Q
    ||||||||||||  |||||||||||| |||| |||||||||||||||||| |||||||    
T  37014108 agaaaaacaatctcaagaaatctcatctttttatgaaagactttttcttgttaaaatt 37014051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 307 - 341
Target Start/End: Original strand, 16894044 - 16894078
Alignment:
Q  307 aagtgattaagagtcttgattgaataccacaagac 341  Q
    |||||||||||||||||||||||||||||||||||    
T  16894044 aagtgattaagagtcttgattgaataccacaagac 16894078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 315 - 384
Target Start/End: Original strand, 5273111 - 5273180
Alignment:
Q  315 aagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagactcttgattgaataccacaagact 384  Q
    |||| ||||||||||||| ||||||||       |||||||||| | ||||||||||||| |||||||||    
T  5273111 aagaatcttgattgaatagcacaagactttttttaaatgacaaaaaatcttgattgaataacacaagact 5273180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 163; Significance: 6e-87; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 163; E-Value: 6e-87
Query Start/End: Original strand, 140 - 384
Target Start/End: Original strand, 19451784 - 19452028
Alignment:
Q  140 tagtaaaatcttaaaagagaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatcca 239  Q
    |||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  19451784 tagtaaaatcttaaaagaaaaaaacaatcataagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 19451883  T
Q  240 tcaaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 339  Q
    ||||||||||||||||||||| ||| || |||||||||||||||||||||||||||||||       ||||||||||||||||||||| |||||||||||    
T  19451884 tcaaaatctgatttattaaacgatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattaaataccacaag 19451983  T
Q  340 acnnnnnnnaaatgacaaagactcttgattgaataccacaagact 384  Q
    ||       |||||||||||| ||||||||||||| |||||||||    
T  19451984 actttttttaaatgacaaagaatcttgattgaataacacaagact 19452028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 140 - 380
Target Start/End: Complemental strand, 21222371 - 21222131
Alignment:
Q  140 tagtaaaatcttaaaagagaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatcca 239  Q
    |||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| ||||||||||||| || ||||||||||||||||||    
T  21222371 tagtaaaatcttaaaagaaaataacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactaaaaaatcccacaaaatcca 21222272  T
Q  240 tcaaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 339  Q
    ||||||||| ||||||||||||||| || |||||||||||||||||||||||| ||||||       |||||||||||||||||||||||||||||||||    
T  21222271 tcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaatacctctagactttttttaagtgattaagagtcttgattgaataccacaag 21222172  T
Q  340 acnnnnnnnaaatgacaaagactcttgattgaataccacaa 380  Q
    ||       |||||||||||| ||||||||||||| |||||    
T  21222171 actttttttaaatgacaaagaatcttgattgaataacacaa 21222131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 140 - 382
Target Start/End: Original strand, 50192526 - 50192769
Alignment:
Q  140 tagtaaaatcttaaaagagaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatcca 239  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  50192526 tagtaaaatcttaaaagaaaaaaacaatcctaaaaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 50192625  T
Q  240 tcaaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagac-nnnnnnnaagtgattaagagtcttgattgaataccacaa 338  Q
    ||||||||||||||||||||||||| ||  ||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||    
T  50192626 tcaaaatctgatttattaaacaatccttcaaaatttgaatgattttgaataccactagacttttttttaagtgattaagagtcttgattgaataccacaa 50192725  T
Q  339 gacnnnnnnnaaatgacaaagactcttgattgaataccacaaga 382  Q
    |||       ||||||||| || ||||||||||||| |||||||    
T  50192726 gacttttttaaaatgacaaggaatcttgattgaataacacaaga 50192769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 140 - 384
Target Start/End: Original strand, 45759985 - 45760230
Alignment:
Q  140 tagtaaaatcttaaaagagaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatcca 239  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||| |||||||||||||||||||||    
T  45759985 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatcaaatactttttcatgctaaaatttcactagaaaatcccacaaaatcca 45760084  T
Q  240 tcaaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 339  Q
    ||||||||||||||||||||||||| || ||| |||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||| |    
T  45760085 tcaaaatctgatttattaaacaatccttcgaagtttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacatg 45760184  T
Q  340 acnnnnnnnaaa-tgacaaagactcttgattgaataccacaagact 384  Q
    ||       ||| ||||||||| ||||||||||||| |||||||||    
T  45760185 actttttttaaattgacaaagaatcttgattgaataacacaagact 45760230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 151; E-Value: 8e-80
Query Start/End: Original strand, 140 - 384
Target Start/End: Original strand, 49198245 - 49198488
Alignment:
Q  140 tagtaaaatcttaaaagagaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatcca 239  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  49198245 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatatcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 49198344  T
Q  240 tcaaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 339  Q
    ||||||||||||||||||||||||| || |||||||||||||||||||||||||||  ||       ||||||||||||||||| ||||||||||||||     
T  49198345 tcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactgaactttttttaagtgattaagagtctt-attgaataccacaaa 49198443  T
Q  340 acnnnnnnnaaatgacaaagactcttgattgaataccacaagact 384  Q
    ||       |||||||||||| ||||||||||||| |||||||||    
T  49198444 actttttttaaatgacaaagaatcttgattgaataacacaagact 49198488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 140 - 384
Target Start/End: Original strand, 28824349 - 28824592
Alignment:
Q  140 tagtaaaatcttaaaagagaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatcca 239  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||| || |||||||||||| || |||||||||  |||||||||||||||||||||    
T  28824349 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgtttttataaaagactttttcatgttaaaatttccctagaaaatcccacaaaatcca 28824448  T
Q  240 tcaaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 339  Q
    ||||||||||||||||||||||||| || |||||||||||||||||||||||||| ||||       |||||||||||||||||||||||||||||||||    
T  28824449 tcaaaatctgatttattaaacaatc-ttcgaaatttgaatgattttgaataccacaagactgtttttaagtgattaagagtcttgattgaataccacaag 28824547  T
Q  340 acnnnnnnnaaatgacaaagactcttgattgaataccacaagact 384  Q
    ||       |||||||||| | ||||||||||||| |||||||||    
T  28824548 actttttttaaatgacaaataatcttgattgaataacacaagact 28824592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 140 - 380
Target Start/End: Original strand, 47654327 - 47654568
Alignment:
Q  140 tagtaaaatcttaaaagagaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatcca 239  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||  |||||||| ||||||||||||    
T  47654327 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaatactttttcatgctaaaatttccctagaaaattccacaaaatcca 47654426  T
Q  240 tcaaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagac-nnnnnnnaagtgattaagagtcttgattgaataccacaa 338  Q
    ||||||||||||||||||||||||| || ||||||||||| |||||||||||||||||||        |||||||||||||| |||||||||||||||||    
T  47654427 tcaaaatctgatttattaaacaatccttcgaaatttgaataattttgaataccactagacttttttttaagtgattaagagttttgattgaataccacaa 47654526  T
Q  339 gacnnnnnnnaaatgacaaagactcttgattgaataccacaa 380  Q
    |||       |||||||||||| ||||||||||||| |||||    
T  47654527 gacttcttttaaatgacaaagaatcttgattgaataacacaa 47654568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 140 - 384
Target Start/End: Complemental strand, 47780935 - 47780691
Alignment:
Q  140 tagtaaaatcttaaaagagaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatcca 239  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||||||||||| |||||||| || |||||||||| |||||||||||||||||||||    
T  47780935 tagtaaaatcttaaaagaaaaaaacaatcttaagaaatctcatgttttcatgaaaaactttttcatgttaaaatttcactagaaaatcccacaaaatcca 47780836  T
Q  240 tcaaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 339  Q
    ||||||||||||||||||||||||| ||| || |||||||||||||||||| ||||||||       ||||||||||||||||||||||||||||||| |    
T  47780835 tcaaaatctgatttattaaacaatccttttaattttgaatgattttgaatatcactagactttttttaagtgattaagagtcttgattgaataccacatg 47780736  T
Q  340 acnnnnnnnaaatgacaaagactcttgattgaataccacaagact 384  Q
    ||       |||||||| | | ||||||||||||| |||||||||    
T  47780735 actttttttaaatgacatataatcttgattgaataacacaagact 47780691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 140 - 384
Target Start/End: Original strand, 35679102 - 35679348
Alignment:
Q  140 tagtaaaatcttaaaagagaaa--aacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatc 237  Q
    |||||||||||||||||| |||  ||||||| ||||||||||||||| |||||||||||||||||| ||||||||||||| ||||||||||||  |||||    
T  35679102 tagtaaaatcttaaaagaaaaagaaacaatcttaagaaatctcatgtcttcatgaaagactttttcatgctaaaatttcactagaaaatcccatcaaatc 35679201  T
Q  238 catcaaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccaca 337  Q
    ||||||||||||||||||||||||||| || ||||||||||||||||||||||||||  |||       ||||||||||||||||||||||||||| |||    
T  35679202 catcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccacatgactttttttaagtgattaagagtcttgattgaatactaca 35679301  T
Q  338 agacnnnnnnnaaatgacaaagactcttgattgaataccacaagact 384  Q
    |||        |||||||||||| |||||||||||||||||||||||    
T  35679302 agattttttttaaatgacaaagaatcttgattgaataccacaagact 35679348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 141 - 379
Target Start/End: Original strand, 6304227 - 6304468
Alignment:
Q  141 agtaaaatcttaaaagagaaaaa--caatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatcc 238  Q
    ||||||||||||||||| |||||  ||||| |||||||| ||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  6304227 agtaaaatcttaaaagaaaaaaaaacaatcataagaaatttcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcc 6304326  T
Q  239 atcaaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagag-tcttgattgaataccaca 337  Q
    |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||       ||||||||||||| | ||| ||||||||||||    
T  6304327 atcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtttttggttgaataccaca 6304426  T
Q  338 agacnnnnnnnaaatgacaaagactcttgattgaataccaca 379  Q
    ||||       |||||||||||| ||||||||||||| ||||    
T  6304427 agactttttttaaatgacaaagaatcttgattgaataacaca 6304468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 155 - 381
Target Start/End: Complemental strand, 35279881 - 35279655
Alignment:
Q  155 agagaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgattta 254  Q
    ||||| ||||||| ||||||||||||||||||||||||||||||||||| || | |||||||| ||||||||||||||||||||||||||||||||||||    
T  35279881 agagagaaacaattctaagaaatctcatgttttcatgaaagactttttcatgttgaaatttcactagaaaatcccacaaaatccatcaaaatctgattta 35279782  T
Q  255 ttaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatga 354  Q
    |||||||||| || ||||||| |||||||||||||||||||||||       |||||||||| ||||||||||||||||||||||||       ||||||    
T  35279781 ttaaacaatccttcgaaatttaaatgattttgaataccactagactttttttaagtgattaatagtcttgattgaataccacaagactttttttaaatga 35279682  T
Q  355 caaagactcttgattgaataccacaag 381  Q
    |||||| ||||||||||||| ||||||    
T  35279681 caaagaatcttgattgaataacacaag 35279655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 151 - 384
Target Start/End: Complemental strand, 45536163 - 45535924
Alignment:
Q  151 taaaagagaaaaacaatcctaagaaatctcatgttttc------atgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaa 244  Q
    ||||||| ||||||||||||||||||||||||||||||      ||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||    
T  45536163 taaaagaaaaaaacaatcctaagaaatctcatgttttcgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaa 45536064  T
Q  245 atctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnn 344  Q
    |||||||||||||||||||| || |||||||||||||||||||||||||||||||       ||| |||||||||||||||||||||||||||| ||       
T  45536063 atctgatttattaaacaatctttcgaaatttgaatgattttgaataccactagactttttttaagcgattaagagtcttgattgaataccacaacacttt 45535964  T
Q  345 nnnnaaatgacaaagactcttgattgaataccacaagact 384  Q
        |||||||||||| | ||||||||||| |||||||||    
T  45535963 gtttaaatgacaaagaatattgattgaataacacaagact 45535924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 159 - 384
Target Start/End: Complemental strand, 49418289 - 49418064
Alignment:
Q  159 aaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttattaa 258  Q
    ||||| ||| |||||||||||||| ||||||||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  49418289 aaaaaaaattctaagaaatctcatattttcatgaaagattttttcatgctaaaatttcaatagaaaatcccacaaaatccatcaaaatctgatttattaa 49418190  T
Q  259 acaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaa 358  Q
    |||||| ||||||||||||||||||||||||||||||||||       ||||||||||||||||| |||||||||||||  |        |||||||||     
T  49418189 acaatcctttgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttaattgaataccacataattttttttaaatgacaat 49418090  T
Q  359 gactcttgattgaataccacaagact 384  Q
    || ||||||||||||| |||||||||    
T  49418089 gaatcttgattgaataacacaagact 49418064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 140 - 384
Target Start/End: Complemental strand, 29556328 - 29556084
Alignment:
Q  140 tagtaaaatcttaaaagagaaaaacaatcctaagaaatctcatgt-tttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatcc 238  Q
    |||| ||||||||||||| |||||||||||||||||||||||||| |||||| ||||||||||||  ||||||||||||||||||||||||| |||||||    
T  29556328 tagttaaatcttaaaaga-aaaaacaatcctaagaaatctcatgtgtttcataaaagactttttcaagctaaaatttcattagaaaatcccataaaatcc 29556230  T
Q  239 atcaaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaa 338  Q
    |||||||||| ||||||||||||||| || |||||||||||||||||||||| |||||||        |||||||||||||||||||||||||| |||||    
T  29556229 atcaaaatctaatttattaaacaatctttcgaaatttgaatgattttgaataacactagattttttttaagtgattaagagtcttgattgaataacacaa 29556130  T
Q  339 gacnnnnnnnaaatgacaaagactcttgattgaataccacaagact 384  Q
    |||       |||| |||| || |||| |||||||| |||||||||    
T  29556129 gactttttttaaataacaatgaatcttaattgaataacacaagact 29556084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 141 - 294
Target Start/End: Original strand, 31572174 - 31572327
Alignment:
Q  141 agtaaaatcttaaaagagaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccat 240  Q
    ||||||||||||||||| ||||||||| ||||||||||||||| ||||||||||||||||||| | ||||||||||| || |||||||||||||||||||    
T  31572174 agtaaaatcttaaaagaaaaaaacaattctaagaaatctcatgatttcatgaaagactttttcatcctaaaatttcactataaaatcccacaaaatccat 31572273  T
Q  241 caaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccac 294  Q
    |||||||||||||||||||||||| || ||||||| ||||||||||||||||||    
T  31572274 caaaatctgatttattaaacaatccttcgaaatttaaatgattttgaataccac 31572327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 154 - 384
Target Start/End: Original strand, 37014630 - 37014860
Alignment:
Q  154 aagagaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgattt 253  Q
    ||||||||||||||| |||||||||||||||||| |||| |||||||||| ||||||||||||| |||||||||| |||||||||||||||||   ||||    
T  37014630 aagagaaaaacaatcttaagaaatctcatgtttttatgagagactttttcatgctaaaatttcactagaaaatccgacaaaatccatcaaaattcaattt 37014729  T
Q  254 attaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatg 353  Q
    || |||||||| || |||||||||||||||||||||| ||| ||||       ||||||| |||| | ||||||||||||||||||||       |||||    
T  37014730 ataaaacaatctttagaaatttgaatgattttgaatatcacaagactttttttaagtgatgaagaatattgattgaataccacaagacttcttctaaatg 37014829  T
Q  354 acaaagactcttgattgaataccacaagact 384  Q
    ||||||| |||| ||||||||||||||||||    
T  37014830 acaaagagtcttaattgaataccacaagact 37014860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 159 - 384
Target Start/End: Complemental strand, 25612362 - 25612137
Alignment:
Q  159 aaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttattaa 258  Q
    ||||||||||  |||||||||||| ||||||||||||||||||||||| |||||||  | || ||||||||||||||||||||||||||  |||||||||    
T  25612362 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattatactacaaaatcccacaaaatccatcaaaatccaatttattaa 25612263  T
Q  259 acaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaa 358  Q
    |||||| ||||||||||||||||||||||||||||| ||||       || |||| || | ||||||||||||||| ||||||       ||||||||||    
T  25612262 acaatcctttgaaatttgaatgattttgaataccacaagactttttttaaatgatgaaaaatcttgattgaatacctcaagacttttttaaaatgacaaa 25612163  T
Q  359 gactcttgattgaataccacaagact 384  Q
    || |||||||||||||||||||||||    
T  25612162 gagtcttgattgaataccacaagact 25612137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 157 - 382
Target Start/End: Original strand, 48177455 - 48177680
Alignment:
Q  157 agaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttatt 256  Q
    ||||||||||||  |||||||||||| ||||||||||||||||||||||| ||||||| || || ||||||||||||||||||||||||||  |||||||    
T  48177455 agaaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttatt 48177554  T
Q  257 aaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgaca 356  Q
    ||||||||||| |||||||||||||||||||||||||| ||||       ||||||| || | | ||||||||||||| ||||||       ||||||||    
T  48177555 aaacaatcattcgaaatttgaatgattttgaataccacaagactttttttaagtgatgaaaaattttgattgaatacctcaagacttttttaaaatgaca 48177654  T
Q  357 aagactcttgattgaataccacaaga 382  Q
    |||| | |||||||||||||||||||    
T  48177655 aagagtattgattgaataccacaaga 48177680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 159 - 384
Target Start/End: Complemental strand, 51701785 - 51701560
Alignment:
Q  159 aaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttattaa 258  Q
    ||||||||||  || ||||||||| ||||||||||||||||||||||| ||||||| || || ||||||||||||||||||||||||||  |||||||||    
T  51701785 aaaaacaatctcaaaaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaa 51701686  T
Q  259 acaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaa 358  Q
    |||||| || |||||||||||||||||||||||||| ||||       || |||| || ||||||||||||||||| ||||||       ||||||||||    
T  51701685 acaatccttcgaaatttgaatgattttgaataccacaagactttttttaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaa 51701586  T
Q  359 gactcttgattgaataccacaagact 384  Q
    || |||||||||||||||||||||||    
T  51701585 gagtcttgattgaataccacaagact 51701560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 159 - 382
Target Start/End: Original strand, 29396383 - 29396606
Alignment:
Q  159 aaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttattaa 258  Q
    ||||||||||  |||||||||||| ||||||||||||||||||||||| ||||||| || || ||||||||||||||||||||||||||  |||||||||    
T  29396383 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaa 29396482  T
Q  259 acaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaa 358  Q
    |||||| || |||||||||||||||||||||||||| ||||       || |||| || ||||||||||||||||| ||||||       ||||||||||    
T  29396483 acaatccttcgaaatttgaatgattttgaataccacaagactttttttaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaa 29396582  T
Q  359 gactcttgattgaataccacaaga 382  Q
    || |||||||||||||||| ||||    
T  29396583 gagtcttgattgaataccaaaaga 29396606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 159 - 380
Target Start/End: Complemental strand, 6312779 - 6312558
Alignment:
Q  159 aaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttattaa 258  Q
    ||||||||||  |||||||||||| ||||||||||||||||||||||| ||||||| || || ||||||||||||||||||||||||||  |||||||||    
T  6312779 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaa 6312680  T
Q  259 acaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaa 358  Q
    |||||| || |||||||||||||||||||||||||| ||||       || |||| || ||||||||||||||||| ||||||       ||||||||||    
T  6312679 acaatccttcgaaatttgaatgattttgaataccacaagactttttttaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaa 6312580  T
Q  359 gactcttgattgaataccacaa 380  Q
    || |||| ||||||||||||||    
T  6312579 gagtcttaattgaataccacaa 6312558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 141 - 382
Target Start/End: Original strand, 32588936 - 32589171
Alignment:
Q  141 agtaaaatcttaaaagagaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccat 240  Q
    ||||||||||||||||| ||||||||||     |||||||||||||||||||||||||||||  ||||||||||||| ||||||||| ||||||||||||    
T  32588936 agtaaaatcttaaaaga-aaaaacaatc-----aaatctcatgttttcatgaaagacttttttatgctaaaatttcactagaaaatctcacaaaatccat 32589029  T
Q  241 caaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaaga 340  Q
    ||||||| |||||||||||||||| ||  ||||||||||||||||||||||||| ||||       ||||||| ||||||||||||||||| ||||||||    
T  32589030 caaaatccgatttattaaacaatccttcaaaatttgaatgattttgaataccacaagacttcttttaagtgatgaagagtcttgattgaatgccacaaga 32589129  T
Q  341 cnnnnnnnaaatgacaaagactcttgattgaataccacaaga 382  Q
             ||||| ||||| |||||||||||||||| ||||    
T  32589130 ttcttgtttaatgataaagagtcttgattgaataccagaaga 32589171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 159 - 384
Target Start/End: Original strand, 15835048 - 15835273
Alignment:
Q  159 aaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttattaa 258  Q
    ||||||||||  |||||||||||| ||||||||||||||||||||||| ||||||| || || ||||||||| ||||||||||||||||  |||||||||    
T  15835048 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccataaaatccatcaaaatccaatttattaa 15835147  T
Q  259 acaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaa 358  Q
    |||||| |||| |||||||||||||||||||||||| |||        || |||| |  ||||||||||||||||| ||||||       ||||||||||    
T  15835148 acaatcctttgcaatttgaatgattttgaataccacaagattttttttaaatgatgagaagtcttgattgaatacctcaagacttttttaaaatgacaaa 15835247  T
Q  359 gactcttgattgaataccacaagact 384  Q
    || |||||||||||||||||||||||    
T  15835248 gagtcttgattgaataccacaagact 15835273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 172 - 384
Target Start/End: Complemental strand, 46328234 - 46328022
Alignment:
Q  172 agaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcatttgaa 271  Q
    |||||||| || |||| |||||||||||||||||| ||||||| || || ||||||||||||||||||||||||||  ||| ||||||||||| || |||    
T  46328234 agaaatcttatctttttatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaattaattaaacaatccttcgaa 46328135  T
Q  272 atttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagactcttgattga 371  Q
    ||||||||||||||||||||||| ||||       ||||||| || ||||||||||||||||| ||||||       |||||||||||| ||||||||||    
T  46328134 atttgaatgattttgaataccacgagactttttgtaagtgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattga 46328035  T
Q  372 ataccacaagact 384  Q
    |||||||||||||    
T  46328034 ataccacaagact 46328022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 199 - 384
Target Start/End: Complemental strand, 730314 - 730128
Alignment:
Q  199 ttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactaga 298  Q
    ||||| ||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||   | ||||||||||||||||||||||||||||||    
T  730314 ttttcatgctaaaatttcactagaaaatctcacaaaatccatcaaaatctgatttattaaacaattcgtcgaaatttgaatgattttgaataccactaga 730215  T
Q  299 c-nnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagactcttgattgaataccacaagact 384  Q
    |        |||||||||||||||||||||||||||||||||||       |||||||||||| ||||||||||||| |||||||||    
T  730214 cttttttttaagtgattaagagtcttgattgaataccacaagactttttttaaatgacaaagaatcttgattgaataacacaagact 730128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 141 - 380
Target Start/End: Original strand, 9577411 - 9577648
Alignment:
Q  141 agtaaaatcttaaaagagaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccat 240  Q
    |||||||| ||||||||  |||||||||| |||||||||||||||||||||||||| |||||| | ||||||||||| ||||||||| ||||||||||||    
T  9577411 agtaaaattttaaaaga--aaaacaatcccaagaaatctcatgttttcatgaaagattttttcattctaaaatttcactagaaaatctcacaaaatccat 9577508  T
Q  241 caaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaaga 340  Q
    |||||||  ||||||||||||||| ||  ||||||||||||||||||||| ||| ||||       ||||||| || ||| |||||| |||| | |||||    
T  9577509 caaaatccaatttattaaacaatccttctaaatttgaatgattttgaatatcacaagactttttttaagtgataaaaagttttgatttaatatctcaaga 9577608  T
Q  341 cnnnnnnnaaatgacaaagactcttgattgaataccacaa 380  Q
    |       |||||||||||  |||||||||||||| ||||    
T  9577609 cttttttaaaatgacaaagggtcttgattgaatacaacaa 9577648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 159 - 380
Target Start/End: Original strand, 9322495 - 9322716
Alignment:
Q  159 aaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttattaa 258  Q
    ||||||||||  |||||||||||| ||||||||||||||||||||||| ||||||| || || ||||||||| |||||||||||||||   |||||||||    
T  9322495 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccataaaatccatcaaaattcaatttattaa 9322594  T
Q  259 acaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaa 358  Q
    |||||| ||  |||||||||||||||||||||||||  |||       || |||| || ||||||||| ||||||| ||||||       ||||||||||    
T  9322595 acaatccttctaaatttgaatgattttgaataccacaggactttttttaaatgatgaaaagtcttgatcgaatacctcaagacttttttaaaatgacaaa 9322694  T
Q  359 gactcttgattgaataccacaa 380  Q
    || |||||||||||||||||||    
T  9322695 gagtcttgattgaataccacaa 9322716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 159 - 384
Target Start/End: Original strand, 28387388 - 28387613
Alignment:
Q  159 aaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttattaa 258  Q
    ||||||||||  |||||||||||| |||| |||||||||||||| ||| |||||||  | || ||||||||||||||||||||||||||  |||||||||    
T  28387388 aaaaacaatctcaagaaatctcatctttttatgaaagacttttttttgttaaaattaaactacaaaatcccacaaaatccatcaaaatccaatttattaa 28387487  T
Q  259 acaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaa 358  Q
    |||||| || ||||||||||||| |||||||||||| |||        || |||| || ||||||||||||||||| ||||||       ||||||||||    
T  28387488 acaatccttcgaaatttgaatgaatttgaataccacaagattttttttaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaa 28387587  T
Q  359 gactcttgattgaataccacaagact 384  Q
    || |||||||||||||||| ||||||    
T  28387588 gaatcttgattgaataccaaaagact 28387613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 140 - 374
Target Start/End: Complemental strand, 33025726 - 33025502
Alignment:
Q  140 tagtaaaatcttaaaagagaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatcca 239  Q
    |||||||||||||||||| ||| |||||| |||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||          
T  33025726 tagtaaaatcttaaaaga-aaacacaatcataagaaatctcatgttttcatgaaagactttttcatgctaaaattttattagaaaatcccacaa------ 33025634  T
Q  240 tcaaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagag-tcttgattgaataccacaa 338  Q
        |||||||| |||||||||||| ||  ||||||||||||||||||||||||| ||||       ||||||||||||| | |||||||||||||||||    
T  33025633 ----aatctgatgtattaaacaatccttcaaaatttgaatgattttgaataccacaagactttttttaagtgattaagagtttttgattgaataccacaa 33025538  T
Q  339 gacnnnnnnnaaatgacaaagactcttgattgaata 374  Q
    ||        ||||| |||||| |||||||||||||    
T  33025537 gaatttttaaaaatgtcaaagaatcttgattgaata 33025502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 193 - 384
Target Start/End: Complemental strand, 48524490 - 48524299
Alignment:
Q  193 aagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcatttgaaatttgaatgattttgaatacc 292  Q
    ||||||||||| || |||||||||| ||||||||||||||||||||||||||| |||||||||||||||||| ||  ||||||||||||||||||||| |    
T  48524490 aagactttttcatgttaaaatttcactagaaaatcccacaaaatccatcaaaaactgatttattaaacaatctttcaaaatttgaatgattttgaatatc 48524391  T
Q  293 actagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagactcttgattgaataccacaagact 384  Q
    || ||||       |||||||||||||| |||||| ||||||||| ||        |||||||||| | ||||||||||||| |||||||||    
T  48524390 acaagactttttttaagtgattaagagttttgattaaataccacatgaatttttttaaatgacaaaaaatcttgattgaataacacaagact 48524299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 157 - 384
Target Start/End: Original strand, 38536092 - 38536309
Alignment:
Q  157 agaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttatt 256  Q
    ||||||||||||  |||||||||||| ||||||||||||||||||||||| ||||||| || ||          |||||||||||||||||  |||||||    
T  38536092 agaaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacacta----------caaaatccatcaaaatccaatttatt 38536181  T
Q  257 aaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgaca 356  Q
    |||||||| |||||||||||||| |||||||||||||| ||||       |||| || || ||||||||||||||||| ||| ||       ||||||||    
T  38536182 aaacaatcctttgaaatttgaataattttgaataccacaagacttttgttaagtaatgaaaagtcttgattgaatacctcaaaacttttttaaaatgaca 38536281  T
Q  357 aagactcttgattgaataccacaagact 384  Q
    |||| |||||||||||||||||||||||    
T  38536282 aagagtcttgattgaataccacaagact 38536309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 157 - 384
Target Start/End: Original strand, 38558310 - 38558527
Alignment:
Q  157 agaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttatt 256  Q
    ||||||||||||  |||||||||||| ||||||||||||||||||||||| ||||||| || ||          |||||||||||||||||  |||||||    
T  38558310 agaaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacacta----------caaaatccatcaaaatccaatttatt 38558399  T
Q  257 aaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgaca 356  Q
    |||||||| |||||||||||||| |||||||||||||| ||||       |||| || || ||||||||||||||||| ||| ||       ||||||||    
T  38558400 aaacaatcctttgaaatttgaataattttgaataccacaagacttttgttaagtaatgaaaagtcttgattgaatacctcaaaacttttttaaaatgaca 38558499  T
Q  357 aagactcttgattgaataccacaagact 384  Q
    |||| |||||||||||||||||||||||    
T  38558500 aagagtcttgattgaataccacaagact 38558527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 175 - 384
Target Start/End: Original strand, 5495117 - 5495316
Alignment:
Q  175 aatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcatttgaaatt 274  Q
    |||||||| ||||||| || |||||||||||| ||||||| || || ||||||||||||||||||          |||||||||| |||| |||||||||    
T  5495117 aatctcatcttttcataaaggactttttcttgttaaaattacactacaaaatcccacaaaatcca----------atttattaaataatcctttgaaatt 5495206  T
Q  275 tgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagactcttgattgaata 374  Q
    | |||||||||||||||||| ||||       ||||||| || ||||||||||||||||| ||||||       |||||||||||| |||| ||||||||    
T  5495207 taaatgattttgaataccacgagactttttttaagtgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttaattgaata 5495306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 157 - 384
Target Start/End: Complemental strand, 29219483 - 29219268
Alignment:
Q  157 agaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttatt 256  Q
    ||||||||||||  |||||||||||| ||||||||||| ||||||||||| ||||||| || ||          |||||||||||||||||  |||||||    
T  29219483 agaaaaacaatctcaagaaatctcatcttttcatgaaatactttttcttgttaaaattacacta----------caaaatccatcaaaatccaatttatt 29219394  T
Q  257 aaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgaca 356  Q
    |||||||| ||   |||||||||||||||||||||||| ||||       ||||||| || ||||||||||||||| | ||||||       |||||||     
T  29219393 aaacaatccttcttaatttgaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattgaatatctcaagacttttttaaaatgac- 29219295  T
Q  357 aagactcttgattgaataccacaagact 384  Q
     ||| |||||||||||||||||||||||    
T  29219294 -agagtcttgattgaataccacaagact 29219268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 241 - 384
Target Start/End: Complemental strand, 18798614 - 18798471
Alignment:
Q  241 caaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaaga 340  Q
    |||||||  ||||||||||||||| || |||||||||||||||||||||||||| ||||       || |||| || ||||||||||||||||| |||||    
T  18798614 caaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagactttttttaaatgatgaaaagtcttgattgaatacctcaaga 18798515  T
Q  341 cnnnnnnnaaatgacaaagactcttgattgaataccacaagact 384  Q
    |       |||||||||||| |||||||||||||||||||||||    
T  18798514 cttttttaaaatgacaaagagtcttgattgaataccacaagact 18798471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 250 - 384
Target Start/End: Complemental strand, 49231000 - 49230866
Alignment:
Q  250 atttattaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnna 349  Q
    |||||||||| |||| || |||||||||||||||||||||||||| ||||       ||||||| || ||||||||||||||||| ||||||       |    
T  49231000 atttattaaataatccttcgaaatttgaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattgaatacctcaagacttttttaa 49230901  T
Q  350 aatgacaaagactcttgattgaataccacaagact 384  Q
    ||||||||||| |||||||||||||||||||||||    
T  49230900 aatgacaaagagtcttgattgaataccacaagact 49230866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 157 - 294
Target Start/End: Original strand, 48668778 - 48668905
Alignment:
Q  157 agaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttatt 256  Q
    ||||||||||||| || ||||||||| ||||||||||||||||||||||| ||||||| || || | ||||||||||||||||          |||||||    
T  48668778 agaaaaacaatcccaacaaatctcatcttttcatgaaagactttttcttgttaaaattacactacagaatcccacaaaatcca----------atttatt 48668867  T
Q  257 aaacaatcatttgaaatttgaatgattttgaataccac 294  Q
    |||||||| || ||||||||||| ||||||||||||||    
T  48668868 aaacaatctttcgaaatttgaataattttgaataccac 48668905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 277 - 380
Target Start/End: Complemental strand, 22183457 - 22183354
Alignment:
Q  277 aatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagactcttgattgaatacc 376  Q
    |||||||||||||||||||||||       |||||||||||| ||||||||||||||||||||||       |||||||||||| ||||||||||||| |    
T  22183457 aatgattttgaataccactagactttttttaagtgattaagaatcttgattgaataccacaagactttttttaaatgacaaagaatcttgattgaataac 22183358  T
Q  377 acaa 380  Q
    ||||    
T  22183357 acaa 22183354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 141 - 201
Target Start/End: Complemental strand, 48524865 - 48524805
Alignment:
Q  141 agtaaaatcttaaaagagaaaaacaatcctaagaaatctcatgttttcatgaaagactttt 201  Q
    ||||||||||||||||| |||| ||||||||| ||||||||||||||||||||||||||||    
T  48524865 agtaaaatcttaaaagaaaaaaccaatcctaacaaatctcatgttttcatgaaagactttt 48524805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 232 - 291
Target Start/End: Complemental strand, 955882 - 955823
Alignment:
Q  232 aaaatccatcaaaatctgatttattaaacaatcatttgaaatttgaatgattttgaatac 291  Q
    ||||||||||||||||||||||||||||||| | || |||||||||||||||||||||||    
T  955882 aaaatccatcaaaatctgatttattaaacaacccttcgaaatttgaatgattttgaatac 955823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 307 - 384
Target Start/End: Complemental strand, 953876 - 953799
Alignment:
Q  307 aagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagactcttgattgaataccacaagact 384  Q
    |||||||||||||||||||| ||||||||||||||       |||||||||||| ||||||||||||| |||||||||    
T  953876 aagtgattaagagtcttgatcgaataccacaagactttttttaaatgacaaagaatcttgattgaataacacaagact 953799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 241 - 291
Target Start/End: Original strand, 31622536 - 31622586
Alignment:
Q  241 caaaatctgatttattaaacaatcatttgaaatttgaatgattttgaatac 291  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||||||    
T  31622536 caaaatccgatttattaaacaatcttttgaaatttgaatgattttgaatac 31622586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 143 - 299
Target Start/End: Complemental strand, 51086014 - 51085860
Alignment:
Q  143 taaaatcttaaaagagaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatca 242  Q
    ||||||||||||||| |||||||||||||  ||||||||| ||||||| ||| |     || |  ||||||||||  ||||||| ||||||||| |||||    
T  51086014 taaaatcttaaaaga-aaaaacaatcctagaaaatctcat-ttttcatcaaaaaaaaaatcatattaaaatttcacaagaaaattccacaaaattcatca 51085917  T
Q  243 aaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagac 299  Q
    |||||  ||||||| || |||| ||  |||||||||| |||||||||||||| ||||    
T  51085916 aaatccaatttatttaataatccttcaaaatttgaattattttgaataccacgagac 51085860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 157 - 382
Target Start/End: Complemental strand, 45272782 - 45272569
Alignment:
Q  157 agaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttatt 256  Q
    ||||||||||||  || ||||||||| |||| || ||||| ||||||||| ||||||| || || |||||| |||||||||||          |||||||    
T  45272782 agaaaaacaatctcaaaaaatctcatctttttataaaagattttttcttgttaaaattacactacaaaatctcacaaaatcca----------atttatt 45272693  T
Q  257 aaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgaca 356  Q
    |||| ||| || ||||||| ||| |||||||||||||| |||        ||||||| || ||||||||||||||||| ||||||       ||||||||    
T  45272692 aaac-atccttcgaaatttaaataattttgaataccacgagattttttttaagtgatgaaaagtcttgattgaatacctcaagac-tttttaaaatgaca 45272595  T
Q  357 aagactcttgattgaataccacaaga 382  Q
    |||| | |||||||||||| ||||||    
T  45272594 aagagttttgattgaatacaacaaga 45272569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 307 - 380
Target Start/End: Original strand, 8141271 - 8141344
Alignment:
Q  307 aagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagactcttgattgaataccacaa 380  Q
    ||||||| || ||||||||||||||||| ||||||       |||||||||||| |||||||||||||||||||    
T  8141271 aagtgatgaatagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaataccacaa 8141344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 172 - 267
Target Start/End: Complemental strand, 38320098 - 38320003
Alignment:
Q  172 agaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatccc-acaaaatccatcaaaatctgatttattaaacaatcatt 267  Q
    |||||| |||| |||||||||||||||||||  |||||||| |||| || |||| ||| |||||||| |||||||||  ||||| ||||||||||||    
T  38320098 agaaatatcatattttcatgaaagacttttttgtgctaaaa-ttcactaaaaaaacccaacaaaatctatcaaaatcctatttagtaaacaatcatt 38320003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 140 - 191
Target Start/End: Complemental strand, 730357 - 730307
Alignment:
Q  140 tagtaaaatcttaaaagagaaaaacaatcctaagaaatctcatgttttcatg 191  Q
    ||||||||||||||||| |||||| || ||||||||||||||||||||||||    
T  730357 tagtaaaatcttaaaag-gaaaaaaaaacctaagaaatctcatgttttcatg 730307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 159 - 214
Target Start/End: Complemental strand, 18798676 - 18798621
Alignment:
Q  159 aaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatt 214  Q
    ||||||||||   ||||||||||| ||||||||||||||||||||||| |||||||    
T  18798676 aaaaacaatctctagaaatctcatcttttcatgaaagactttttcttgttaaaatt 18798621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 241 - 341
Target Start/End: Complemental strand, 47784509 - 47784410
Alignment:
Q  241 caaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaaga 340  Q
    |||||||  ||||||||||||||| || ||| ||||||| |||||||||||||| ||||       || |||  ||||||||||||||||||||||||||    
T  47784509 caaaatccaatttattaaacaatctttagaagtttgaataattttgaataccacaagacttttttaaa-tgacaaagagtcttgattgaataccacaaga 47784411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 349 - 384
Target Start/End: Complemental strand, 47784444 - 47784409
Alignment:
Q  349 aaatgacaaagactcttgattgaataccacaagact 384  Q
    |||||||||||| |||||||||||||||||||||||    
T  47784444 aaatgacaaagagtcttgattgaataccacaagact 47784409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 153; Significance: 5e-81; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 140 - 341
Target Start/End: Original strand, 38581 - 38781
Alignment:
Q  140 tagtaaaatcttaaaagagaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatcca 239  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  38581 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 38680  T
Q  240 tcaaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 339  Q
    ||||||||||| ||||||||||||| || |||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||    
T  38681 tcaaaatctga-ttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaag 38779  T
Q  340 ac 341  Q
    ||    
T  38780 ac 38781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 151; Significance: 8e-80; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 151; E-Value: 8e-80
Query Start/End: Original strand, 140 - 384
Target Start/End: Original strand, 38872 - 39115
Alignment:
Q  140 tagtaaaatcttaaaagagaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatcca 239  Q
    |||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||| ||| ||||||||| |||||||||||||||||||||    
T  38872 tagtaaaatcttaaaaga-aaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatcca 38970  T
Q  240 tcaaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 339  Q
    ||||||||||||||||||||||||| ||  ||||||||||||||||||||| ||||||||       ||||||||||||||||| |||||||||||||||    
T  38971 tcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaatatcactagacttcttttaagtgattaagagtctttattgaataccacaag 39070  T
Q  340 acnnnnnnnaaatgacaaagactcttgattgaataccacaagact 384  Q
    ||       |||||| ||||| |||||||||||||||||||||||    
T  39071 actttttttaaatgataaagaatcttgattgaataccacaagact 39115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 150; Significance: 3e-79; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 140 - 384
Target Start/End: Complemental strand, 100444 - 100198
Alignment:
Q  140 tagtaaaatcttaaaagagaaaaa--caatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatc 237  Q
    ||||| |||||||||||| |||||  || |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| |||||||||||    
T  100444 tagtacaatcttaaaagaaaaaaaaacagtcctaagaaatctcatgttttcatgaaagactttttcttgttaaaatttcactagaaaaacccacaaaatc 100345  T
Q  238 catcaaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccaca 337  Q
    ||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||| |||||||    
T  100344 catcaaaatttgatttattaaacaatcctttgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgagtaccaca 100245  T
Q  338 agacnnnnnnnaaatgacaaagactcttgattgaataccacaagact 384  Q
    ||||       |||||||||||| ||||||||||||| |||||||||    
T  100244 agactttttttaaatgacaaagaatcttgattgaataacacaagact 100198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 144; Significance: 1e-75; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 142 - 380
Target Start/End: Complemental strand, 102324 - 102084
Alignment:
Q  142 gtaaaatcttaaaagagaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatc 241  Q
    |||||||||||||| | |||||||||| ||||||||||||| |||| ||||||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  102324 gtaaaatcttaaaataaaaaaacaatcataagaaatctcatatttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatc 102225  T
Q  242 aaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaaga- 340  Q
    ||||||||||||||||||||||| || |||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||     
T  102224 aaaatctgatttattaaacaatctttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaagac 102125  T
Q  341 -cnnnnnnnaaatgacaaagactcttgattgaataccacaa 380  Q
     |       |||||||||||| ||||||||||||| |||||    
T  102124 tctttttttaaatgacaaagaatcttgattgaataacacaa 102084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0276 (Bit Score: 112; Significance: 2e-56; HSPs: 1)
Name: scaffold0276
Description:

Target: scaffold0276; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 159 - 384
Target Start/End: Original strand, 534 - 759
Alignment:
Q  159 aaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttattaa 258  Q
    ||||| |||||||||||||||||||||||| | |||||||||||| | | ||||||||| |||||||| ||||||||||||||||||| |||||||||||    
T  534 aaaaaaaatcctaagaaatctcatgttttcgtcaaagactttttcataccaaaatttcactagaaaattccacaaaatccatcaaaatatgatttattaa 633  T
Q  259 acaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaa 358  Q
    |||||| ||  ||||||||||||||||||||||||||| |        |||||||||||||| ||||||||||||||||| ||       ||||||||||    
T  634 acaatccttccaaatttgaatgattttgaataccactaaaaaaaatttaagtgattaagagttttgattgaataccacaatactttttttaaatgacaaa 733  T
Q  359 gactcttgattgaataccacaagact 384  Q
    || ||||||||||||| |||||||||    
T  734 gaatcttgattgaataacacaagact 759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0543 (Bit Score: 104; Significance: 9e-52; HSPs: 1)
Name: scaffold0543
Description:

Target: scaffold0543; HSP #1
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 159 - 384
Target Start/End: Complemental strand, 10772 - 10547
Alignment:
Q  159 aaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttattaa 258  Q
    ||||||||||  |||||||||||| ||||||||||||||||||||||| ||||||| || || ||||||||| |||||||||||||||   |||||||||    
T  10772 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccataaaatccatcaaaattcaatttattaa 10673  T
Q  259 acaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaa 358  Q
    |||||| ||||||||||||||||||||||||||||| |||        || |||| |  ||||||||||||||||| ||||||       ||||||||||    
T  10672 acaatcctttgaaatttgaatgattttgaataccacaagattttttttaaatgatgagaagtcttgattgaatacctcaagacttttttaaaatgacaaa 10573  T
Q  359 gactcttgattgaataccacaagact 384  Q
    || |||||||||||||||||||||||    
T  10572 gagtcttgattgaataccacaagact 10547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 90; Significance: 2e-43; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 157 - 380
Target Start/End: Original strand, 39610 - 39833
Alignment:
Q  157 agaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttatt 256  Q
    ||||||||||||  ||||||||| || ||||||||||||||||||||||| ||||||| || || ||||||||||||||||||||||||||  |||||||    
T  39610 agaaaaacaatctcaagaaatcttatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttatt 39709  T
Q  257 aaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgaca 356  Q
    ||| |||| || ||| ||||||||||||||||||||||  |||       ||||||| || | |||||||||||||   ||||||       ||||||||    
T  39710 aaataatccttcgaagtttgaatgattttgaataccacatgacattttttaagtgatgaaaaatcttgattgaatagttcaagactttttaaaaatgaca 39809  T
Q  357 aagactcttgattgaataccacaa 380  Q
    |||| |||||||||||||||||||    
T  39810 aagagtcttgattgaataccacaa 39833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1504 (Bit Score: 89; Significance: 8e-43; HSPs: 1)
Name: scaffold1504
Description:

Target: scaffold1504; HSP #1
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 159 - 384
Target Start/End: Complemental strand, 1075 - 850
Alignment:
Q  159 aaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttattaa 258  Q
    ||||||||||  |||||||||||| |||| |||||||||||||||| | ||||||| || || ||||||||||||||||||||||||||| |||||||||    
T  1075 aaaaacaatctcaagaaatctcatattttaatgaaagactttttctagttaaaattacactacaaaatcccacaaaatccatcaaaatct-atttattaa 977  T
Q  259 acaatcatttgaaatttgaatgattttgaataccactagac-nnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaa 357  Q
    | |||  || |||||||||||||||||||||||||| ||||        ||||||| || ||||||||||||||||| || ||        |||||||||    
T  976 ataattcttcgaaatttgaatgattttgaataccacaagacttttttttaagtgatgaaaagtcttgattgaatacctcatgatttttttaaaatgacaa 877  T
Q  358 agactcttgattgaataccacaagact 384  Q
    ||| |||||||||||||||||||||||    
T  876 agagtcttgattgaataccacaagact 850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 86; Significance: 5e-41; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 157 - 294
Target Start/End: Original strand, 58069 - 58206
Alignment:
Q  157 agaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttatt 256  Q
    ||||||||||||  |||||||||||| ||||||||||||| ||| ||||| |||||||  | || ||||||||||||||||||||||||||  |||||||    
T  58069 agaaaaacaatctcaagaaatctcatcttttcatgaaagattttctcttgttaaaattatactacaaaatcccacaaaatccatcaaaatccaatttatt 58168  T
Q  257 aaacaatcatttgaaatttgaatgattttgaataccac 294  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  58169 aaacaatcattcgaaatttgaatgattttgaataccac 58206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 83; Significance: 3e-39; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 157 - 384
Target Start/End: Complemental strand, 14086 - 13869
Alignment:
Q  157 agaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttatt 256  Q
    ||||||||||||  |||||||||||| ||||||||||||||||||||||  ||||||  || ||          |||||||||||||||||  |||||||    
T  14086 agaaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttattaaaatcccacta----------caaaatccatcaaaatccaatttatt 13997  T
Q  257 aaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgaca 356  Q
    |||||||| ||||||||||||||||||||||||||||| ||||       ||||||| || ||||||||||||||||| ||| ||       ||||||||    
T  13996 aaacaatcttttgaaatttgaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattgaatacctcaatacttttttaaaatgaca 13897  T
Q  357 aagactcttgattgaataccacaagact 384  Q
    |||| |||||||||||||||||||||||    
T  13896 aagagtcttgattgaataccacaagact 13869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 83; Significance: 3e-39; HSPs: 2)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 157 - 384
Target Start/End: Original strand, 21241 - 21458
Alignment:
Q  157 agaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttatt 256  Q
    ||||||||||||  |||||||||||| ||||||||||||||||||||||  ||||||  || ||          |||||||||||||||||  |||||||    
T  21241 agaaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttattaaaatcccacta----------caaaatccatcaaaatccaatttatt 21330  T
Q  257 aaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgaca 356  Q
    |||||||| ||||||||||||||||||||||||||||| ||||       ||||||| || ||||||||||||||||| ||| ||       ||||||||    
T  21331 aaacaatcttttgaaatttgaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattgaatacctcaatacttttttaaaatgaca 21430  T
Q  357 aagactcttgattgaataccacaagact 384  Q
    |||| |||||||||||||||||||||||    
T  21431 aagagtcttgattgaataccacaagact 21458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 157 - 205
Target Start/End: Complemental strand, 28556 - 28508
Alignment:
Q  157 agaaaaacaatcctaagaaatctcatgttttcatgaaagactttttctt 205  Q
    ||||||||||||  |||||||||||| ||||||||||||||||||||||    
T  28556 agaaaaacaatctcaagaaatctcatcttttcatgaaagactttttctt 28508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 79; Significance: 8e-37; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 162 - 341
Target Start/End: Original strand, 36905 - 37084
Alignment:
Q  162 aacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttattaaaca 261  Q
    |||||||  ||||||||| || ||||||||||||||||||||||| ||||||| || || ||||||||||||||||||||||||||  ||||||||||||    
T  36905 aacaatctcaagaaatcttatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaaca 37004  T
Q  262 atcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagac 341  Q
    ||  || ||||||| |||||||||||||||| | ||||       || |||  |||||||||||||||||| ||||||||    
T  37005 atgcttcgaaattttaatgattttgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatagcacaagac 37084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0922 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0922
Description:

Target: scaffold0922; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 234 - 384
Target Start/End: Complemental strand, 4337 - 4187
Alignment:
Q  234 aatccatcaaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatac 333  Q
    ||||||||||||||  ||||||||||||||| ||  ||||||||||||||||||||||||| ||||       || |||| || ||||||||||||||||    
T  4337 aatccatcaaaatccaatttattaaacaatccttcaaaatttgaatgattttgaataccacaagactttttttaaatgatgaaaagtcttgattgaatac 4238  T
Q  334 cacaagacnnnnnnnaaatgacaaagactcttgattgaataccacaagact 384  Q
    | ||||||       |||| ||||||| |||||||||||||||||||||||    
T  4237 ctcaagacttttttaaaattacaaagagtcttgattgaataccacaagact 4187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 59; Significance: 7e-25; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 157 - 239
Target Start/End: Complemental strand, 14974 - 14892
Alignment:
Q  157 agaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatcca 239  Q
    |||||||||||| ||||||||||||| ||||||||||||||||||||||| ||||||| || || ||||||||||||||||||    
T  14974 agaaaaacaatcttaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatcca 14892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0839 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0839
Description:

Target: scaffold0839; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 157 - 267
Target Start/End: Original strand, 3685 - 3795
Alignment:
Q  157 agaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttatt 256  Q
    ||||||||||||  || |||| | || |||| ||||||||| |||||||| ||||||| || || ||||||||||||||||||||||||||  |||||||    
T  3685 agaaaaacaatctcaaaaaatataatctttttatgaaagaccttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttatt 3784  T
Q  257 aaacaatcatt 267  Q
    |||||||||||    
T  3785 aaacaatcatt 3795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 291
Target Start/End: Complemental strand, 199989 - 199905
Alignment:
Q  207 ctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcatttgaaatttgaatgattttgaatac 291  Q
    ||||| ||||| || |||||| ||||||||| ||||||||   |||||||||||| || ||  |||||||||||||||| |||||    
T  199989 ctaaagtttcactaaaaaatctcacaaaatcaatcaaaattcaatttattaaacactctttcaaaatttgaatgattttaaatac 199905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 32; Significance: 0.000000009; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 349 - 384
Target Start/End: Complemental strand, 233759 - 233724
Alignment:
Q  349 aaatgacaaagactcttgattgaataccacaagact 384  Q
    |||||||||||| |||||||||||||||||||||||    
T  233759 aaatgacaaagagtcttgattgaataccacaagact 233724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 349 - 384
Target Start/End: Complemental strand, 234607 - 234572
Alignment:
Q  349 aaatgacaaagactcttgattgaataccacaagact 384  Q
    |||||||||||| |||||||||||||||||||||||    
T  234607 aaatgacaaagagtcttgattgaataccacaagact 234572  T

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