View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1125_low_62 (Length: 331)

Name: NF1125_low_62
Description: NF1125
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1125_low_62
NF1125_low_62
[»] chr3 (82 HSPs)
chr3 (1-233)||(21711269-21711501)
chr3 (1-233)||(8370296-8370527)
chr3 (1-233)||(16264396-16264628)
chr3 (1-231)||(36029141-36029372)
chr3 (1-230)||(35925529-35925757)
chr3 (1-233)||(1736111-1736346)
chr3 (1-233)||(40592589-40592823)
chr3 (1-233)||(27974759-27974993)
chr3 (11-233)||(30709606-30709831)
chr3 (1-233)||(48438260-48438494)
chr3 (16-233)||(6794537-6794754)
chr3 (25-233)||(18552716-18552924)
chr3 (1-233)||(47923711-47923947)
chr3 (22-233)||(3715830-3716043)
chr3 (1-233)||(24694973-24695205)
chr3 (1-233)||(26299034-26299267)
chr3 (5-233)||(27453004-27453235)
chr3 (1-233)||(32143367-32143602)
chr3 (22-233)||(25795827-25796038)
chr3 (1-224)||(8126685-8126909)
chr3 (1-233)||(40844697-40844934)
chr3 (1-233)||(33386482-33386707)
chr3 (1-195)||(39032362-39032555)
chr3 (1-233)||(26928406-26928642)
chr3 (1-233)||(27986263-27986487)
chr3 (1-233)||(1417298-1417531)
chr3 (16-229)||(3323513-3323727)
chr3 (16-233)||(3328179-3328397)
chr3 (22-196)||(47649653-47649828)
chr3 (1-231)||(1305996-1306231)
chr3 (1-233)||(37466337-37466574)
chr3 (1-82)||(37725873-37725954)
chr3 (22-233)||(21353608-21353821)
chr3 (1-233)||(8738874-8739114)
chr3 (1-233)||(9091112-9091352)
chr3 (1-233)||(40372607-40372846)
chr3 (181-233)||(2671585-2671637)
chr3 (181-233)||(7167290-7167342)
chr3 (181-233)||(8477408-8477460)
chr3 (1-113)||(25929203-25929317)
chr3 (1-63)||(4386784-4386846)
chr3 (2-61)||(27038270-27038329)
chr3 (134-233)||(4386869-4386968)
chr3 (1-61)||(27026925-27026985)
chr3 (1-48)||(23392109-23392156)
chr3 (18-113)||(5366146-5366244)
chr3 (16-48)||(5236656-5236688)
chr3 (16-48)||(5258344-5258376)
chr3 (16-48)||(5260523-5260555)
chr3 (16-48)||(9581219-9581251)
chr3 (16-48)||(19684089-19684121)
chr3 (16-48)||(23198137-23198169)
chr3 (16-48)||(23200336-23200368)
chr3 (181-233)||(28501697-28501748)
chr3 (181-233)||(28503864-28503915)
chr3 (167-233)||(29100205-29100273)
chr3 (16-48)||(29682295-29682327)
chr3 (16-48)||(39153561-39153593)
chr3 (16-48)||(40734434-40734466)
chr3 (16-48)||(44331481-44331513)
chr3 (16-48)||(45095101-45095133)
chr3 (173-219)||(5366304-5366351)
chr3 (182-233)||(22173184-22173234)
chr3 (1-48)||(23410529-23410576)
chr3 (16-47)||(37408395-37408426)
chr3 (195-226)||(39039995-39040026)
chr3 (183-233)||(18656481-18656530)
chr3 (173-233)||(2672910-2672970)
chr3 (173-233)||(2677066-2677126)
chr3 (173-233)||(8512263-8512323)
chr3 (173-233)||(8517143-8517203)
chr3 (185-233)||(25929435-25929484)
chr3 (16-48)||(760783-760815)
chr3 (16-48)||(7764404-7764436)
chr3 (16-48)||(9636326-9636358)
chr3 (20-48)||(29810808-29810836)
chr3 (16-44)||(31314381-31314409)
chr3 (173-233)||(32475531-32475589)
chr3 (173-233)||(32480389-32480447)
chr3 (16-44)||(32744630-32744658)
chr3 (16-48)||(32891039-32891071)
chr3 (16-48)||(40735319-40735351)
[»] chr4 (61 HSPs)
chr4 (1-233)||(36315048-36315280)
chr4 (1-233)||(36329257-36329489)
chr4 (1-233)||(10047425-10047660)
chr4 (1-233)||(3777595-3777828)
chr4 (1-233)||(16623111-16623344)
chr4 (1-233)||(5396489-5396722)
chr4 (1-233)||(6743233-6743466)
chr4 (1-233)||(38152256-38152490)
chr4 (1-233)||(5269018-5269242)
chr4 (1-196)||(8689314-8689509)
chr4 (14-233)||(31985464-31985685)
chr4 (1-233)||(42599392-42599623)
chr4 (22-233)||(24333855-24334069)
chr4 (1-196)||(25861851-25862046)
chr4 (1-150)||(16628690-16628839)
chr4 (1-233)||(5143305-5143539)
chr4 (1-232)||(5147724-5147957)
chr4 (16-233)||(5112283-5112501)
chr4 (16-233)||(39774138-39774356)
chr4 (35-233)||(54867229-54867427)
chr4 (1-233)||(28468352-28468580)
chr4 (145-229)||(16630642-16630727)
chr4 (134-233)||(3796470-3796570)
chr4 (16-226)||(37781915-37782128)
chr4 (22-112)||(3793919-3794010)
chr4 (1-231)||(1983118-1983349)
chr4 (3-233)||(18377405-18377636)
chr4 (181-233)||(24741986-24742038)
chr4 (181-233)||(29760687-29760739)
chr4 (180-233)||(39246040-39246094)
chr4 (16-48)||(5429615-5429647)
chr4 (16-48)||(5871756-5871788)
chr4 (16-48)||(6542381-6542413)
chr4 (16-48)||(9927657-9927689)
chr4 (16-48)||(13009631-13009663)
chr4 (16-48)||(13992485-13992517)
chr4 (16-48)||(37740562-37740594)
chr4 (16-48)||(45687383-45687415)
chr4 (16-48)||(48142978-48143010)
chr4 (16-48)||(52082857-52082889)
chr4 (16-48)||(52095562-52095594)
chr4 (16-48)||(56178836-56178868)
chr4 (16-47)||(12739751-12739782)
chr4 (16-47)||(12747957-12747988)
chr4 (1-48)||(51336985-51337032)
chr4 (182-233)||(51520503-51520553)
chr4 (182-233)||(56146700-56146750)
chr4 (183-233)||(3814070-3814119)
chr4 (183-233)||(5732711-5732760)
chr4 (195-233)||(8689498-8689536)
chr4 (195-233)||(25862035-25862073)
chr4 (183-233)||(45347807-45347856)
chr4 (183-233)||(45357286-45357335)
chr4 (3-48)||(4587881-4587926)
chr4 (20-48)||(26175836-26175864)
chr4 (16-44)||(29254430-29254458)
chr4 (16-48)||(30000005-30000037)
chr4 (182-233)||(34495822-34495874)
chr4 (16-48)||(36463589-36463621)
chr4 (16-48)||(47038609-47038641)
chr4 (16-44)||(54200110-54200138)
[»] chr8 (55 HSPs)
chr8 (1-233)||(7412387-7412619)
chr8 (5-233)||(4456074-4456303)
chr8 (1-233)||(5702298-5702534)
chr8 (22-233)||(6127267-6127481)
chr8 (1-233)||(19175572-19175805)
chr8 (1-233)||(23799394-23799628)
chr8 (22-233)||(26403068-26403281)
chr8 (1-196)||(4696426-4696620)
chr8 (1-233)||(31071043-31071280)
chr8 (1-233)||(19752212-19752445)
chr8 (1-233)||(1261768-1262005)
chr8 (16-233)||(3051166-3051384)
chr8 (1-233)||(26287947-26288173)
chr8 (1-233)||(26301204-26301430)
chr8 (1-233)||(26313198-26313424)
chr8 (3-221)||(7492993-7493212)
chr8 (16-111)||(28307730-28307826)
chr8 (16-81)||(9054253-9054318)
chr8 (181-233)||(4760074-4760126)
chr8 (134-233)||(9054789-9054888)
chr8 (181-233)||(36979423-36979475)
chr8 (16-233)||(5990394-5990611)
chr8 (181-233)||(10689142-10689194)
chr8 (181-233)||(30655692-30655744)
chr8 (181-233)||(33037806-33037857)
chr8 (15-48)||(4743403-4743436)
chr8 (181-233)||(18853166-18853219)
chr8 (181-233)||(18870560-18870613)
chr8 (16-48)||(3303870-3303902)
chr8 (16-48)||(4731594-4731626)
chr8 (16-48)||(4733745-4733777)
chr8 (181-233)||(6311343-6311394)
chr8 (16-48)||(6598908-6598940)
chr8 (16-48)||(6674361-6674393)
chr8 (174-233)||(6813729-6813789)
chr8 (16-48)||(12702838-12702870)
chr8 (16-48)||(15212722-15212754)
chr8 (16-48)||(17982589-17982621)
chr8 (16-48)||(18106278-18106310)
chr8 (16-48)||(31218193-31218225)
chr8 (16-48)||(33352086-33352118)
chr8 (16-48)||(43036359-43036391)
chr8 (16-48)||(44303790-44303822)
chr8 (182-233)||(7289915-7289965)
chr8 (183-233)||(25328268-25328317)
chr8 (173-233)||(10684243-10684303)
chr8 (16-48)||(1746418-1746450)
chr8 (16-48)||(4162436-4162468)
chr8 (16-44)||(10015084-10015112)
chr8 (16-48)||(19945560-19945592)
chr8 (16-44)||(30143278-30143306)
chr8 (182-233)||(35745437-35745488)
chr8 (16-48)||(40321016-40321048)
chr8 (20-48)||(41365047-41365075)
chr8 (16-48)||(42498130-42498162)
[»] chr1 (53 HSPs)
chr1 (1-233)||(3281754-3281986)
chr1 (1-233)||(29651857-29652092)
chr1 (1-233)||(13604440-13604674)
chr1 (14-233)||(16124345-16124567)
chr1 (1-233)||(26644716-26644948)
chr1 (1-233)||(21536388-21536620)
chr1 (1-233)||(13598444-13598679)
chr1 (22-233)||(19072974-19073186)
chr1 (22-233)||(19120864-19121076)
chr1 (1-233)||(37069816-37070046)
chr1 (22-233)||(47703774-47703987)
chr1 (22-210)||(40816655-40816842)
chr1 (1-233)||(47098643-47098875)
chr1 (1-233)||(9476307-9476541)
chr1 (1-233)||(19358658-19358894)
chr1 (1-233)||(19361247-19361483)
chr1 (20-233)||(32889485-32889698)
chr1 (30-233)||(19379917-19380123)
chr1 (1-233)||(24202583-24202820)
chr1 (1-233)||(47102657-47102892)
chr1 (1-233)||(22819475-22819710)
chr1 (1-168)||(19366122-19366293)
chr1 (16-111)||(27104234-27104330)
chr1 (1-113)||(9022724-9022835)
chr1 (173-233)||(27104362-27104423)
chr1 (181-233)||(24787364-24787415)
chr1 (16-113)||(11031307-11031405)
chr1 (16-48)||(197108-197140)
chr1 (16-48)||(834367-834399)
chr1 (16-48)||(3189267-3189299)
chr1 (16-48)||(3198084-3198116)
chr1 (16-48)||(3206923-3206955)
chr1 (16-48)||(3847321-3847353)
chr1 (16-48)||(10925159-10925191)
chr1 (16-48)||(13316518-13316550)
chr1 (16-48)||(20762608-20762640)
chr1 (16-48)||(23555465-23555497)
chr1 (16-48)||(30476648-30476680)
chr1 (16-48)||(50167375-50167407)
chr1 (194-233)||(775718-775757)
chr1 (183-233)||(25445079-25445128)
chr1 (183-233)||(41390627-41390676)
chr1 (183-233)||(41398282-41398331)
chr1 (18-48)||(44455098-44455128)
chr1 (173-233)||(43988443-43988503)
chr1 (173-225)||(48382471-48382524)
chr1 (16-44)||(777179-777207)
chr1 (16-48)||(1833458-1833490)
chr1 (16-48)||(4552837-4552869)
chr1 (16-48)||(13138174-13138206)
chr1 (16-48)||(15820243-15820275)
chr1 (16-48)||(28265754-28265786)
chr1 (16-48)||(31659174-31659206)
[»] chr2 (71 HSPs)
chr2 (1-233)||(21629989-21630224)
chr2 (1-233)||(28258995-28259228)
chr2 (15-226)||(23078303-23078514)
chr2 (1-229)||(36757580-36757809)
chr2 (1-226)||(10707070-10707296)
chr2 (1-233)||(39482977-39483212)
chr2 (1-233)||(14698827-14699058)
chr2 (22-233)||(31056090-31056301)
chr2 (1-233)||(13569374-13569608)
chr2 (1-233)||(17865249-17865484)
chr2 (1-233)||(33528442-33528672)
chr2 (22-233)||(8040106-8040322)
chr2 (1-233)||(8389967-8390201)
chr2 (1-233)||(34388904-34389130)
chr2 (1-233)||(33118182-33118414)
chr2 (1-233)||(20522266-20522501)
chr2 (24-233)||(34682174-34682385)
chr2 (1-233)||(3491796-3492033)
chr2 (16-224)||(40014980-40015189)
chr2 (1-233)||(2869510-2869744)
chr2 (1-233)||(40738888-40739113)
chr2 (134-233)||(10445395-10445495)
chr2 (84-233)||(42039570-42039720)
chr2 (1-93)||(10445285-10445378)
chr2 (1-225)||(15903708-15903932)
chr2 (129-233)||(25398541-25398646)
chr2 (129-233)||(25403679-25403784)
chr2 (129-233)||(25407668-25407773)
chr2 (1-69)||(25409842-25409912)
chr2 (22-113)||(2837868-2837961)
chr2 (181-233)||(9296400-9296452)
chr2 (181-233)||(11098926-11098978)
chr2 (181-233)||(14291534-14291586)
chr2 (21-113)||(35397676-35397768)
chr2 (173-234)||(16940199-16940261)
chr2 (173-234)||(17010864-17010926)
chr2 (18-113)||(18674235-18674331)
chr2 (173-233)||(27149284-27149345)
chr2 (16-48)||(2334617-2334649)
chr2 (16-48)||(4484530-4484562)
chr2 (16-48)||(4503332-4503364)
chr2 (16-48)||(5723454-5723486)
chr2 (16-48)||(11151791-11151823)
chr2 (16-48)||(11690437-11690469)
chr2 (16-48)||(14202607-14202639)
chr2 (16-48)||(29867805-29867837)
chr2 (16-48)||(34139971-34140003)
chr2 (16-48)||(36773498-36773530)
chr2 (16-48)||(39284821-39284853)
chr2 (16-48)||(42362288-42362320)
chr2 (16-48)||(45099691-45099723)
chr2 (182-233)||(44312613-44312663)
chr2 (1-69)||(1344362-1344432)
chr2 (183-233)||(32246834-32246883)
chr2 (183-233)||(39811978-39812027)
chr2 (16-61)||(41586383-41586429)
chr2 (177-225)||(2838024-2838073)
chr2 (18-233)||(28770608-28770825)
chr2 (20-48)||(723944-723972)
chr2 (16-63)||(3278217-3278265)
chr2 (20-88)||(9296232-9296303)
chr2 (20-48)||(14634026-14634054)
chr2 (16-48)||(17057569-17057601)
chr2 (16-48)||(17085552-17085584)
chr2 (182-233)||(19344467-19344518)
chr2 (182-233)||(19349325-19349376)
chr2 (16-48)||(24885597-24885629)
chr2 (16-48)||(33162650-33162682)
chr2 (16-48)||(36205863-36205895)
chr2 (16-48)||(36988275-36988307)
chr2 (16-48)||(38312176-38312208)
[»] chr5 (65 HSPs)
chr5 (1-233)||(9353150-9353383)
chr5 (1-233)||(14520276-14520509)
chr5 (1-233)||(15464578-15464813)
chr5 (22-233)||(10281797-10282010)
chr5 (1-233)||(12083995-12084226)
chr5 (1-233)||(36932166-36932401)
chr5 (1-233)||(19588792-19589024)
chr5 (1-233)||(11916790-11917023)
chr5 (22-233)||(3880345-3880558)
chr5 (1-233)||(28832305-28832536)
chr5 (1-233)||(17003777-17004011)
chr5 (1-233)||(38219444-38219681)
chr5 (1-233)||(11181650-11181883)
chr5 (1-226)||(31300413-31300640)
chr5 (39-233)||(42127266-42127461)
chr5 (1-233)||(35387708-35387945)
chr5 (1-114)||(24553345-24553459)
chr5 (129-233)||(38192219-38192324)
chr5 (1-81)||(42127188-42127268)
chr5 (1-113)||(7160722-7160835)
chr5 (51-231)||(2630279-2630460)
chr5 (54-233)||(6741898-6742076)
chr5 (16-233)||(24135894-24136117)
chr5 (16-233)||(33030771-33030991)
chr5 (174-233)||(24553499-24553557)
chr5 (181-233)||(30631452-30631503)
chr5 (181-233)||(31180260-31180311)
chr5 (16-48)||(533705-533737)
chr5 (16-48)||(5887616-5887648)
chr5 (16-48)||(13239688-13239720)
chr5 (16-48)||(13342997-13343029)
chr5 (16-48)||(19806320-19806352)
chr5 (16-48)||(25412698-25412730)
chr5 (16-48)||(36074244-36074276)
chr5 (16-48)||(39468749-39468781)
chr5 (182-233)||(1457151-1457201)
chr5 (16-47)||(3075859-3075890)
chr5 (182-233)||(27445016-27445066)
chr5 (182-233)||(27449860-27449910)
chr5 (16-47)||(31182909-31182940)
chr5 (182-233)||(43592325-43592375)
chr5 (182-233)||(43598770-43598820)
chr5 (182-233)||(43604262-43604312)
chr5 (182-233)||(43609754-43609804)
chr5 (183-233)||(15044732-15044781)
chr5 (173-233)||(31396972-31397032)
chr5 (173-233)||(31401829-31401889)
chr5 (182-234)||(33791361-33791413)
chr5 (184-233)||(37556613-37556661)
chr5 (184-233)||(37561435-37561483)
chr5 (182-233)||(2785421-2785472)
chr5 (16-48)||(8566146-8566178)
chr5 (16-48)||(13488139-13488171)
chr5 (16-48)||(16409419-16409451)
chr5 (16-48)||(16452017-16452049)
chr5 (16-48)||(26170718-26170750)
chr5 (16-48)||(26177827-26177859)
chr5 (16-48)||(28750855-28750887)
chr5 (16-48)||(30182525-30182557)
chr5 (16-48)||(30683120-30683152)
chr5 (182-233)||(33768225-33768276)
chr5 (16-48)||(33831616-33831648)
chr5 (16-44)||(37439070-37439098)
chr5 (16-48)||(42428630-42428662)
chr5 (16-48)||(42926829-42926861)
[»] scaffold0006 (3 HSPs)
scaffold0006 (1-233)||(133097-133331)
scaffold0006 (1-231)||(2540-2773)
scaffold0006 (1-233)||(5729-5964)
[»] scaffold0087 (2 HSPs)
scaffold0087 (1-233)||(43779-44012)
scaffold0087 (1-233)||(36650-36883)
[»] chr6 (41 HSPs)
chr6 (1-233)||(31086292-31086524)
chr6 (25-233)||(18232891-18233101)
chr6 (1-233)||(5572061-5572292)
chr6 (14-233)||(5757309-5757529)
chr6 (1-233)||(22963745-22963978)
chr6 (1-233)||(23824415-23824648)
chr6 (1-233)||(21356082-21356316)
chr6 (1-233)||(31979559-31979791)
chr6 (22-233)||(4630000-4630211)
chr6 (22-232)||(21801183-21801394)
chr6 (16-233)||(24435804-24436022)
chr6 (42-233)||(10077027-10077216)
chr6 (1-233)||(22709064-22709289)
chr6 (1-196)||(31936660-31936854)
chr6 (1-196)||(5017314-5017493)
chr6 (1-233)||(5674581-5674821)
chr6 (22-124)||(14521831-14521932)
chr6 (19-112)||(31076772-31076866)
chr6 (174-233)||(28155550-28155608)
chr6 (16-48)||(2171730-2171762)
chr6 (16-48)||(3039103-3039135)
chr6 (16-48)||(28137608-28137640)
chr6 (16-48)||(33160553-33160585)
chr6 (16-48)||(33211385-33211417)
chr6 (182-233)||(11857020-11857070)
chr6 (182-233)||(22010686-22010736)
chr6 (173-231)||(31076931-31076990)
chr6 (16-113)||(33721391-33721489)
chr6 (183-233)||(14737566-14737615)
chr6 (183-233)||(14742426-14742475)
chr6 (173-233)||(33330424-33330484)
chr6 (173-233)||(33335921-33335981)
chr6 (16-48)||(5406398-5406430)
chr6 (16-48)||(5410723-5410755)
chr6 (182-233)||(6005463-6005514)
chr6 (16-48)||(9183231-9183263)
chr6 (16-48)||(16452529-16452561)
chr6 (16-48)||(16567142-16567174)
chr6 (16-48)||(16568979-16569011)
chr6 (182-233)||(16838790-16838841)
chr6 (16-48)||(31404873-31404905)
[»] chr7 (65 HSPs)
chr7 (1-233)||(2479382-2479615)
chr7 (19-233)||(49091707-49091924)
chr7 (34-233)||(55993-56195)
chr7 (1-233)||(2647515-2647747)
chr7 (22-233)||(29159849-29160063)
chr7 (1-231)||(4796486-4796716)
chr7 (1-233)||(46516123-46516361)
chr7 (16-233)||(2580436-2580654)
chr7 (1-233)||(20284135-20284368)
chr7 (1-232)||(23402831-23403063)
chr7 (16-233)||(9189840-9190059)
chr7 (22-233)||(21983330-21983544)
chr7 (16-233)||(33332283-33332501)
chr7 (19-233)||(35960862-35961078)
chr7 (1-233)||(47263722-47263945)
chr7 (1-233)||(21639854-21640091)
chr7 (1-233)||(21646052-21646289)
chr7 (66-233)||(44848567-44848735)
chr7 (1-233)||(21988952-21989187)
chr7 (1-233)||(18408809-18409045)
chr7 (1-233)||(18413685-18413921)
chr7 (16-205)||(9235415-9235605)
chr7 (16-233)||(9185007-9185216)
chr7 (1-223)||(3047311-3047533)
chr7 (1-233)||(5817088-5817321)
chr7 (1-69)||(44847943-44848011)
chr7 (1-233)||(1533255-1533495)
chr7 (181-233)||(2058011-2058063)
chr7 (134-233)||(28617177-28617276)
chr7 (181-233)||(20357547-20357598)
chr7 (16-48)||(4178711-4178743)
chr7 (16-48)||(4586097-4586129)
chr7 (173-233)||(16880119-16880178)
chr7 (173-233)||(16884975-16885034)
chr7 (16-48)||(19502114-19502146)
chr7 (16-48)||(24514960-24514992)
chr7 (16-48)||(29990991-29991023)
chr7 (16-48)||(31733169-31733201)
chr7 (16-48)||(35853851-35853883)
chr7 (16-48)||(38671422-38671454)
chr7 (16-48)||(39731313-39731345)
chr7 (16-48)||(41317634-41317666)
chr7 (16-48)||(41649210-41649242)
chr7 (16-48)||(43864180-43864212)
chr7 (16-48)||(47676336-47676368)
chr7 (16-48)||(48408739-48408771)
chr7 (16-48)||(48489367-48489399)
chr7 (183-233)||(19992359-19992408)
chr7 (183-233)||(24024316-24024365)
chr7 (183-233)||(31109573-31109622)
chr7 (173-233)||(24261302-24261362)
chr7 (173-233)||(24266181-24266241)
chr7 (16-48)||(1113593-1113625)
chr7 (16-44)||(2761506-2761534)
chr7 (16-48)||(4538740-4538772)
chr7 (16-44)||(8153278-8153306)
chr7 (16-48)||(12098059-12098091)
chr7 (16-48)||(14070033-14070065)
chr7 (16-48)||(14380061-14380093)
chr7 (16-48)||(23554976-23555008)
chr7 (16-48)||(24526097-24526129)
chr7 (16-48)||(25615799-25615831)
chr7 (16-48)||(26417252-26417284)
chr7 (16-48)||(47674143-47674175)
chr7 (16-44)||(48491515-48491543)
[»] scaffold0140 (1 HSPs)
scaffold0140 (1-233)||(8235-8470)
[»] scaffold0036 (1 HSPs)
scaffold0036 (1-233)||(85729-85962)
[»] scaffold0148 (1 HSPs)
scaffold0148 (22-233)||(10775-10989)
[»] scaffold0188 (2 HSPs)
scaffold0188 (1-233)||(17766-18003)
scaffold0188 (1-233)||(23859-24096)
[»] scaffold0176 (1 HSPs)
scaffold0176 (1-233)||(17309-17530)
[»] scaffold0098 (2 HSPs)
scaffold0098 (3-103)||(45375-45475)
scaffold0098 (195-233)||(45299-45337)
[»] scaffold0078 (1 HSPs)
scaffold0078 (20-113)||(23697-23792)
[»] scaffold1519 (1 HSPs)
scaffold1519 (16-48)||(853-885)
[»] scaffold0491 (2 HSPs)
scaffold0491 (16-48)||(11361-11393)
scaffold0491 (16-48)||(8935-8967)
[»] scaffold0016 (1 HSPs)
scaffold0016 (16-48)||(114539-114571)
[»] scaffold0355 (1 HSPs)
scaffold0355 (183-233)||(9632-9681)
[»] scaffold0197 (1 HSPs)
scaffold0197 (173-233)||(14288-14348)


Alignment Details
Target: chr3 (Bit Score: 185; Significance: 1e-100; HSPs: 82)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 21711501 - 21711269
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatcaaaagtttccttttgttttttct 100  Q
    ||||||||| || ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| |||||||||| ||||||    
T  21711501 tctttgtagtgaggatctcttgggttgggaaacattgtaaacaccttgagtagtgagatttcaccattggaaggatcaaaagcttccttttgtgttttct 21711402  T
Q  101 cttaggattcattattgagagtgtaggtaacacaaatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaactctttgtaa 200  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||| | ||||||||||||||| || ||||||||||||||||||||||||||||    
T  21711401 cttaggattcattattgagagtgtgggtaacacaaatgggtagaaattaggtcttgctcttgtgtaagcttttaagctaatttcttgtaactctttgtaa 21711302  T
Q  201 cactttcatcatagtggattggagagctgctct 233  Q
    |||||||||||||||||||| ||||||||||||    
T  21711301 cactttcatcatagtggatttgagagctgctct 21711269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 161; E-Value: 8e-86
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 8370296 - 8370527
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatcaaaagtttccttttgttttttct 100  Q
    ||||||||| || |||||||||||||||||||||||||||||| |||| |||||||||||||||||||| ||||||||||||||||||||||| ||||||    
T  8370296 tctttgtagtgaggatctcttgggttgggaaacattgtaaacatcttgggtagtgagatttcaccattggaaggatcaaaagtttccttttgtgttttct 8370395  T
Q  101 cttaggattcattattgagagtgtaggtaacacaaatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaactctttgtaa 200  Q
    ||||||||||| ||||| ||| || ||| ||||||||||||||||||||  | ||| ||||||||||| || ||||||||||||||||||||||||||||    
T  8370396 cttaggattca-tattgtgagagtgggtgacacaaatgggtagaaattatgtcttgttcttgtgtaagcttttaagctaatttcttgtaactctttgtaa 8370494  T
Q  201 cactttcatcatagtggattggagagctgctct 233  Q
    |||||||||||||||||||||||||||||||||    
T  8370495 cactttcatcatagtggattggagagctgctct 8370527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 16264628 - 16264396
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatcaaaagtttccttttgttttttct 100  Q
    ||||||||  || ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| |||||||||| | ||||    
T  16264628 tctttgtaatgaggatctcttgggttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaagcttccttttgtgtcttct 16264529  T
Q  101 cttaggattcattattgagagtgtaggtaacacaaatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaactctttgtaa 200  Q
    |||||| ||||| |||||||| || ||||||||||||| ||||||||||| | ||| ||||||| ||| ||  |||||| ||||||||||||||||||||    
T  16264528 cttagggttcatcattgagagagtgggtaacacaaatgtgtagaaattaggtcttgttcttgtggaagcttgcaagctattttcttgtaactctttgtaa 16264429  T
Q  201 cactttcatcatagtggattggagagctgctct 233  Q
    |||||||||||||||||||||||||||||||||    
T  16264428 cactttcatcatagtggattggagagctgctct 16264396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 36029372 - 36029141
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatcaaaagtttccttttgttttttct 100  Q
    ||||||||| || ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| |||||||||| ||||||    
T  36029372 tctttgtagtgaggatctcttgggttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaagcttccttttgtgttttct 36029273  T
Q  101 cttaggattcat-tattgagagtgtaggtaacac-aaatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaactc-tttg 197  Q
    |||||||||||| | |||||||||   || |||| ||||||||||||||||| | ||| |||||||||||||| ||||||||||||||||||||| ||||    
T  36029272 cttaggattcatattttgagagtg--agtgacacaaaatgggtagaaattaggtcttgttcttgtgtaagtttgtaagctaatttcttgtaactcttttg 36029175  T
Q  198 taacactttcatcatagtggattggagagctgct 231  Q
    ||||||||||||||||||||||||||||||||||    
T  36029174 taacactttcatcatagtggattggagagctgct 36029141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 35925757 - 35925529
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatcaaaagtttccttttgttttttct 100  Q
    ||||||||| || ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| |||||||||| ||||||    
T  35925757 tctttgtagtgaggatcttttgggttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaagcttccttttgtgttttct 35925658  T
Q  101 cttaggattcattattgagagtgtaggtaacacaaatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaactctttgtaa 200  Q
    ||||||||||| ||||| ||| || ||| ||||||||||||||||||||| | ||| ||| ||||||| || ||| ||||||||||||||||||||||||    
T  35925657 cttaggattca-tattgtgagagtgggtgacacaaatgggtagaaattaggttttgttctagtgtaagcttataaactaatttcttgtaactctttgtaa 35925559  T
Q  201 cactttcatcatagtggattggagagctgc 230  Q
    ||||||||||||||||||||||||| ||||    
T  35925558 cactttcatcatagtggattggagaactgc 35925529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 1736111 - 1736346
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatc-aaaagtttccttttgttttttc 99  Q
    ||||||||| || ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| ||||| ||| |||||| |||||    
T  1736111 tctttgtagtgaggatctattgggttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaaagcttctttttgtgttttc 1736210  T
Q  100 tcttaggattcattattgagagtgtaggtaacac-aaatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaactc-tttg 197  Q
    ||||||||||||||||||||||||| ||| |||| ||||||||||||||||| | ||| ||||||||||| || |||| |||||||||||||||| ||||    
T  1736211 tcttaggattcattattgagagtgttggtgacacaaaatgggtagaaattaggtcttgttcttgtgtaagcttataagttaatttcttgtaactcttttg 1736310  T
Q  198 taacactttcatcatagtggattggagagctgctct 233  Q
    ||||||||||||||||||||||||||| ||||||||    
T  1736311 taacactttcatcatagtggattggagggctgctct 1736346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 40592589 - 40592823
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatc-aaaagtttccttttgttttttc 99  Q
    ||||||||| || ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| ||||| |||||||||| |||||    
T  40592589 tctttgtagtgaggatctcttgggttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaaagcttccttttgtgttttc 40592688  T
Q  100 tcttaggattcattattgagagtgtaggtaacac-aaatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaactc-tttg 197  Q
    |||||||||||| ||||| ||| || ||| |||| ||||||||||||||||||| ||| ||||||||||| || ||||||||||||||||||||| ||||    
T  40592689 tcttaggattca-tattgtgagagtgggtgacacaaaatgggtagaaattagattttgttcttgtgtaagcttgtaagctaatttcttgtaactcttttg 40592787  T
Q  198 taacactttcatcatagtggattggagagctgctct 233  Q
    |||||||||||||||||| |||||||||||| ||||    
T  40592788 taacactttcatcatagtcgattggagagcttctct 40592823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 27974759 - 27974993
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatcaaaagtttccttttgttttttct 100  Q
    ||||||||| || |||||||||||| |||||||||||||||||||||| |||||||||||||||||||| |||||||||||| |||||||||| | ||||    
T  27974759 tctttgtagtgaggatctcttgggtcgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaagcttccttttgtgtcttct 27974858  T
Q  101 c-ttaggattcattattgagagtgtaggtaacacaaatgggtagaaattagatattgctcttgtgtaagtttctaagcta-atttcttgtaactctttgt 198  Q
    | ||||| ||||||||||||||  | || |||||||||||||||||||||| | ||| ||||||||||| ||  ||||||  ||||||||||||||||||    
T  27974859 ctttagggttcattattgagagaatgggaaacacaaatgggtagaaattaggtcttgttcttgtgtaagcttgcaagctatttttcttgtaactctttgt 27974958  T
Q  199 aacactttcatcatagtggattggagagctgctct 233  Q
    |||||||||||||||||||||||||||||||||||    
T  27974959 aacactttcatcatagtggattggagagctgctct 27974993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 11 - 233
Target Start/End: Original strand, 30709606 - 30709831
Alignment:
Q  11 gatgatctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatcaaa-agtttccttttgttttttctcttaggatt 109  Q
    |||||||| ||||||||||||||||||||||||||||| | |||||||||||| ||||| || ||||||| || |||||||||| |||||||||||||||    
T  30709606 gatgatcttttgggttgggaaacattgtaaacaccttggggagtgagatttcatcattggaatgatcaaatagcttccttttgtgttttctcttaggatt 30709705  T
Q  110 cattattgagagtgtaggtaacacaa-atgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaactc-tttgtaacactttc 207  Q
    ||||||||||||||| ||| |||||| ||||||||||||||| | ||||||||||||||| || ||||||||||||||||||||| ||||||||| ||||    
T  30709706 cattattgagagtgtgggtgacacaagatgggtagaaattaggtcttgctcttgtgtaagcttataagctaatttcttgtaactcttttgtaacaatttc 30709805  T
Q  208 atcatagtggattggagagctgctct 233  Q
    ||||||||||||||||| ||||||||    
T  30709806 atcatagtggattggagggctgctct 30709831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 48438494 - 48438260
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatc-aaaagtttccttttgttttttc 99  Q
    |||||||||  | |||||||||| |||||||||||||||||||||||| |||||||||||||||||||| || |||| ||||| |||||||||| |||||    
T  48438494 tctttgtagtaaggatctcttgg-ttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaatgatcaaaaagcttccttttgtgttttc 48438396  T
Q  100 tcttaggattcattattgagagtgtaggtaacac-aaatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaactc-tttg 197  Q
    ||||||||||||||||||||||||| ||| |||| ||||||||||||||||| | ||| ||||||||||| || || |||||||||||||||||| ||||    
T  48438395 tcttaggattcattattgagagtgtgggtgacacaaaatgggtagaaattaggtcttgttcttgtgtaagcttatatgctaatttcttgtaactcttttg 48438296  T
Q  198 taacactttcatcatagtggattggagagctgctct 233  Q
    ||||||||||||||||||||||||||| ||||||||    
T  48438295 taacactttcatcatagtggattggagggctgctct 48438260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 16 - 233
Target Start/End: Original strand, 6794537 - 6794754
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatcaaaagtttccttttgttttttctcttaggattcattat 115  Q
    ||||||| ||||||||||||||||||||||||| |||||||||||||||||||| || || |||||| |||||||||| |||||||||||| |||| |||    
T  6794537 tctcttgagttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaatgaacaaaagcttccttttgtattttctcttagggttca-tat 6794635  T
Q  116 tgagagtgtaggtaacacaaatgggtagaaattagatattgctcttgtgtaagtttctaagctaa-tttcttgtaactctttgtaacactttcatcatag 214  Q
    || ||| || ||| |||||||||||||||||||||   ||| ||||||||||| ||  ||||||| ||||||||||||||||||||||||||||||||||    
T  6794636 tgtgagagtgggtgacacaaatgggtagaaattaggacttgttcttgtgtaagcttgcaagctaattttcttgtaactctttgtaacactttcatcatag 6794735  T
Q  215 tggattggagagctgctct 233  Q
    |||||||||||||||||||    
T  6794736 tggattggagagctgctct 6794754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 25 - 233
Target Start/End: Original strand, 18552716 - 18552924
Alignment:
Q  25 ttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatc-aaaagtttccttttgttttttctcttaggattcattattgagagtg 123  Q
    |||||||||||||||||||||||| |||||||||||||||||||| ||||||| ||||  |||||||||| ||||||||||||||||   ||||||||||    
T  18552716 ttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaaaacttccttttgtgttttctcttaggattc---attgagagtg 18552812  T
Q  124 taggtaacac-aaatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaactc-tttgtaacactttcatcatagtggattg 221  Q
    | ||| |||| ||||||||||||||||| | ||| ||||||||||| || ||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  18552813 tgggtgacacaaaatgggtagaaattaggtcttgttcttgtgtaagcttataagctaatttcttgtaactcttttgtaacactttcatcatagtggattg 18552912  T
Q  222 gagagctgctct 233  Q
    ||| ||||||||    
T  18552913 gagggctgctct 18552924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 47923711 - 47923947
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatc-aaaagtttccttttgttttttc 99  Q
    ||||||||| ||  |||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| ||||| |||||||||| |||||    
T  47923711 tctttgtagtgagaatctcttgggttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaaagcttccttttgtgttttc 47923810  T
Q  100 tcttaggattcattattgagagtgtaggtaacac-aaatgggtagaaattagatattgctc-ttgtgtaagtttctaagctaatttcttgtaactc-ttt 196  Q
    || |||||||||||||||||||||| | | |||| ||||||||| ||||||| | |||||| ||||||||  || ||||||||||||||||||||| |||    
T  47923811 tcgtaggattcattattgagagtgtggatgacacaaaatgggtataaattaggttttgctctttgtgtaaacttttaagctaatttcttgtaactctttt 47923910  T
Q  197 gtaacactttcatcatagtggattggagagctgctct 233  Q
    ||| ||||||||||||||| ||||| || ||||||||    
T  47923911 gtagcactttcatcatagtagattgaagggctgctct 47923947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 22 - 233
Target Start/End: Original strand, 3715830 - 3716043
Alignment:
Q  22 gggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatc-aaaagtttccttttgttttttctcttaggattcattattgaga 120  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| ||||| || ||||||| ||||||||||||||||| ||||| ||    
T  3715830 gggttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaaagctttcttttgtgttttctcttaggattca-tattgtga 3715928  T
Q  121 gtgtaggtaacac-aaatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaactc-tttgtaacactttcatcatagtgga 218  Q
      || ||| |||| ||||||||||||||||  | ||| |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| ||    
T  3715929 aagtgggtgacacaaaatgggtagaaattaagtcttgttcttgtgtaagtttgtaagctaatttcttgtaactcttttgtaacactttcatcatagtaga 3716028  T
Q  219 ttggagagctgctct 233  Q
    |||||||||||||||    
T  3716029 ttggagagctgctct 3716043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 24694973 - 24695205
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatc-aaaagtttccttttgttttttc 99  Q
    ||||||||| || ||||||||||||||||||||||||||||||||||| || ||||||||||||||||| || |||| ||||| |||||||||| |||||    
T  24694973 tctttgtagtgaggatctcttgggttgggaaacattgtaaacaccttgggtggtgagatttcaccattggaatgatcaaaaagcttccttttgtgttttc 24695072  T
Q  100 tcttaggattcattattgagagtgtaggtaacac-aaatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaactc-tttg 197  Q
    | |||||||||   ||||||||||| ||| |||| ||||||||||||||||| | ||| |||| ||||||||| ||||||||||||||||||||| ||||    
T  24695073 ttttaggattc---attgagagtgtgggtgacacaaaatgggtagaaattaggtcttgttcttttgtaagtttataagctaatttcttgtaactcttttg 24695169  T
Q  198 taacactttcatcatagtggattggagagctgctct 233  Q
    ||||||||||||||||| ||||| ||| | ||||||    
T  24695170 taacactttcatcatagcggattagagggttgctct 24695205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 26299267 - 26299034
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatc-aaaagtttcc-ttttgtttttt 98  Q
    ||||||||| || ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||  ||| ||||| |||| |||||| ||||    
T  26299267 tctttgtagtgaggatctcttgggttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaattatcaaaaagcttcctttttgtgtttt 26299168  T
Q  99 ctcttaggattcattattgagagtgtaggtaacac-aaatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaactc-ttt 196  Q
    ||||||||||   | ||||||| ||| ||| |||| ||||||||||||||||| | ||| |||||| ||||||| ||||||||||||||||||||| |||    
T  26299167 ctcttaggat---taattgagattgtgggtgacacaaaatgggtagaaattaggtcttgttcttgtctaagtttataagctaatttcttgtaactctttt 26299071  T
Q  197 gtaacactttcatcatagtggattggagagctgctct 233  Q
    ||||||||||||||||||| |||||||| ||||||||    
T  26299070 gtaacactttcatcatagtagattggagggctgctct 26299034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 5 - 233
Target Start/End: Complemental strand, 27453235 - 27453004
Alignment:
Q  5 tgtagagatgatctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatcaaaagtttccttttgttttttctc--t 102  Q
    ||||| || ||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| |||||||||||| |||||||||| | |||||  |    
T  27453235 tgtagtgaggatctcttgggttggcaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaagcttccttttgtgtcttctcttt 27453136  T
Q  103 taggattcattattgagagtgt-aggtaacacaaatgggtagaaattagatattgctcttgtgtaagtttctaagcta-atttcttgtaactctttgtaa 200  Q
    |||| |||| ||||||||| ||  || |||||||||||||||||| |||  |||| ||||||||||| ||  ||||||  ||||||||||| ||||||||    
T  27453135 tagggttca-tattgagagagtggggaaacacaaatgggtagaaaataggaattgttcttgtgtaagcttgcaagctatttttcttgtaaccctttgtaa 27453037  T
Q  201 cactttcatcatagtggattggagagctgctct 233  Q
    |||||||||||||||||||||||||||||||||    
T  27453036 cactttcatcatagtggattggagagctgctct 27453004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 32143602 - 32143367
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatcaaaagtttccttttgttttttct 100  Q
    ||||||||| |||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| |||||||||||| ||||| |||| | ||||    
T  32143602 tctttgtagtgatgatctcttgggttggaaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaagcttcctcttgtgtcttct 32143503  T
Q  101 c--ttaggattcattattgagagtgt-aggtaacacaaatgggtagaaattagatattgctcttgtgtaagtttctaagcta-atttcttgtaactcttt 196  Q
    |  ||||| |||| ||||||||| ||  || |||||||||||||||||  ||| | ||| ||||||||||| ||  ||||||  ||||||||||| ||||    
T  32143502 cttttagggttca-tattgagagagtggggaaacacaaatgggtagaatctaggtcttgttcttgtgtaagcttgcaagctatttttcttgtaacccttt 32143404  T
Q  197 gtaacactttcatcatagtggattggagagctgctct 233  Q
    |||||||||||||||||||||||||||||||||||||    
T  32143403 gtaacactttcatcatagtggattggagagctgctct 32143367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 22 - 233
Target Start/End: Complemental strand, 25796038 - 25795827
Alignment:
Q  22 gggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatc-aaaagtttccttttgttttttctcttaggattcattattgaga 120  Q
    ||||||||||||| ||||||||||||| |||||||||||||||||||| ||||||| ||||| |||||||| | ||||||||||||||||   |||||||    
T  25796038 gggttgggaaacaatgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaaagcttccttttatgttttctcttaggattc---attgaga 25795942  T
Q  121 gtgtaggtaacac-aaatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaactcttt-gtaacactttcatcatagtgga 218  Q
    |||| ||| |||| ||||||||||||||||| | ||| |||| |||||| || |||||||||||||||||||||||| |||||||||||||| |||| ||    
T  25795941 gtgtgggtgacacaaaatgggtagaaattaggtcttgttcttttgtaagcttataagctaatttcttgtaactctttcgtaacactttcatcttagtaga 25795842  T
Q  219 ttggagagctgctct 233  Q
    |||||||||||||||    
T  25795841 ttggagagctgctct 25795827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 8126909 - 8126685
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatc-aaaagtttccttttgttttttc 99  Q
    ||||||||| || | | ||||||||||||||||||||||||||||||| |||||||||||||| ||||| ||||||| ||||| ||| |||||| |||||    
T  8126909 tctttgtagtgaggttttcttgggttgggaaacattgtaaacaccttgggtagtgagatttcatcattggaaggatcaaaaagcttctttttgtgttttc 8126810  T
Q  100 tcttaggattcattattgagagtgtaggtaacac--aaatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaactc-ttt 196  Q
    ||||| |||||   ||||||||||| ||| ||||  ||||||||||||||||  ||||| |||| |||||| || ||||||||||||||||||||| |||    
T  8126809 tcttaagattc---attgagagtgtgggtgacacaaaaatgggtagaaattaagtattgttcttttgtaagcttataagctaatttcttgtaactctttt 8126713  T
Q  197 gtaacactttcatcatagtggattggag 224  Q
    |||||||||||||| |||||||||||||    
T  8126712 gtaacactttcatcgtagtggattggag 8126685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 40844934 - 40844697
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaacattgtaaacaccttgcgtagtgagatt-----tcaccattgaaaggatc-aaaagtttccttttgtt 94  Q
    ||||||||| || ||||| |||||||| |||||||||||||||||||| ||| |||||||     | ||||||| ||||||| ||||| ||||||||||     
T  40844934 tctttgtagtgaggatctattgggttgagaaacattgtaaacaccttgagtaatgagatttgacctgaccattggaaggatcaaaaagcttccttttgtg 40844835  T
Q  95 ttttctcttaggattcattattgagagtgtaggtaacac-aaatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaactc 193  Q
    ||||||||||||||||   ||||||||||| ||| |||| ||||||||||||||||| | ||| ||||||||||| || |||||||||||||||||||||    
T  40844834 ttttctcttaggattc---attgagagtgtgggtgacacaaaatgggtagaaattaggtcttgttcttgtgtaagcttataagctaatttcttgtaactc 40844738  T
Q  194 -tttgtaacactttcatcatagtggattggagagctgctct 233  Q
     ||||||||||||||||||||||||||| ||| ||||||||    
T  40844737 ttttgtaacactttcatcatagtggatttgagggctgctct 40844697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 33386482 - 33386707
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatcaaaagtttccttttgttttttct 100  Q
    ||||||||| || |||||||||||||| |||||||||||||||||||| |||||||||||||||||||| |||||||||||| |||||||||| | ||||    
T  33386482 tctttgtagtgaggatctcttgggttgagaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaagcttccttttgtgtcttct 33386581  T
Q  101 c--ttaggattcattattgagagtgtaggtaacacaaatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaactctttgt 198  Q
    |  ||||| |||||||||||||| || || ||||||||||||||||||||||   ||| ||||||||||| ||  || ||| |||        || ||||    
T  33386582 cttttagggttcattattgagagagtgggaaacacaaatgggtagaaattaggacttgttcttgtgtaagcttgcaaactatttt--------tc-ttgt 33386672  T
Q  199 aacactttcatcatagtggattggagagctgctct 233  Q
    |||||||||||||||||||||||||||||||||||    
T  33386673 aacactttcatcatagtggattggagagctgctct 33386707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 195
Target Start/End: Original strand, 39032362 - 39032555
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatcaaaagtttccttttgttttttct 100  Q
    ||||||||| || ||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| |||||||||||| |||||||||| | ||||    
T  39032362 tctttgtagtga-gatctcttgggttggtaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaagcttccttttgtgtcttct 39032460  T
Q  101 cttaggattcattattgagagtgtaggtaacacaaatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaactctt 195  Q
    |||||| ||||| |||||||| ||  | |||| |||||| |||||||||||| ||||||||| ||||| ||  |||||| |||||||||||||||    
T  39032461 cttagggttcatcattgagagagtgagaaacataaatggatagaaattagatcttgctcttgcgtaagcttgcaagctattttcttgtaactctt 39032555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 26928406 - 26928642
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatcaaaagtttccttttgttttttct 100  Q
    ||||||||| || ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| |||||||||||| ||||| |||| | ||||    
T  26928406 tctttgtagtgaggatctcttgggttgggaaacattgtaaacaccttgggtaatgagatttcaccattggaaggatcaaaagcttcctcttgtgtcttct 26928505  T
Q  101 c--ttaggattcat-tattgagagtgtaggtaacacaaatgggtagaaattagatattgctcttgtgtaagtttctaagcta--atttcttgtaactctt 195  Q
    |  ||||| ||||| |  ||||||||  || |||||||||||||||||  ||| | ||| ||||||||||| ||  ||||||   ||||||||||| |||    
T  26928506 cttttagggttcatattgtgagagtg-gggaaacacaaatgggtagaatctaggtcttgttcttgtgtaagcttgcaagctattttttcttgtaaccctt 26928604  T
Q  196 tgtaacactttcatcatagtggattggagagctgctct 233  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  26928605 tgtaacactttcatcatagtggattggagagttgctct 26928642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 27986263 - 27986487
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatcaaaagtttccttttgttttttct 100  Q
    ||||||||| || ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| |||||||||| | ||||    
T  27986263 tctttgtagtgaggatctcttgggttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaagcttccttttgtgtcttct 27986362  T
Q  101 c--ttaggattcattattgagagtgtaggtaacacaaatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaactctttgt 198  Q
    |  ||||| || | ||||||||| || || |||||||||||||||||||||| | ||| ||||||||||| ||  |||||  ||| ||        ||||    
T  27986363 cttttagggttga-tattgagagagtgggaaacacaaatgggtagaaattaggtcttgttcttgtgtaagcttgcaagct--tttttt-------cttgt 27986452  T
Q  199 aacactttcatcatagtggattggagagctgctct 233  Q
    |||||||||||||||||||||||||||||||||||    
T  27986453 aacactttcatcatagtggattggagagctgctct 27986487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 1417298 - 1417531
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatc-aaaagtttccttttgttttttc 99  Q
    ||||||||| || | | ||||||||||||||||||||||||||| ||  |||||||||||||||||||||||||||| |||||||| ||||||| |||||    
T  1417298 tctttgtagtgaggttatcttgggttgggaaacattgtaaacactttaggtagtgagatttcaccattgaaaggatcaaaaagttttcttttgtgttttc 1417397  T
Q  100 tcttaggattcattattgagagtgtagg---taacacaaatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaactcttt 196  Q
    |||||||||||   |||| |||||| ||   ||  | |||||||||||||||||   ||| |||| ||||||||| |||||||||||||| |||||| ||    
T  1417398 tcttaggattc---attgggagtgtgggtgatatgaaaaatgggtagaaattaggacttgttcttttgtaagtttataagctaatttcttataactcatt 1417494  T
Q  197 gtaacactttcatcatagtggattggagagctgctct 233  Q
    ||||||||||| || ||||||||||||| | ||||||    
T  1417495 gtaacactttcttcttagtggattggagggatgctct 1417531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 16 - 229
Target Start/End: Original strand, 3323513 - 3323727
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatc-aaaagtttccttttgttttttctcttaggattcatta 114  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||| || |||| ||||| |||||||||| ||||||||||| ||||   |    
T  3323513 tctcttgggttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaatgatcaaaaagcttccttttgtgttttctcttagaattc---a 3323609  T
Q  115 ttgagagtgtagg---taacacaaatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaactctttgtaacactttcatca 211  Q
    |||||||||| ||   ||  |  |||||||||||||||    ||| |||| |||||| || ||||||||||||||||||||| ||||||||||||||||     
T  3323610 ttgagagtgtgggtgatatgaacaatgggtagaaattatgacttgttcttttgtaagcttataagctaatttcttgtaactcattgtaacactttcatct 3323709  T
Q  212 tagtggattggagagctg 229  Q
    ||||||||||||| ||||    
T  3323710 tagtggattggagggctg 3323727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 16 - 233
Target Start/End: Original strand, 3328179 - 3328397
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatc-aaaagtttccttttgttttttctcttaggattcatta 114  Q
    ||||||||||||| ||||||||||||||||||| |||||||||||||| ||||| ||||||| ||||  |||||||||| |||||||||||||| |   |    
T  3328179 tctcttgggttggaaaacattgtaaacaccttgggtagtgagatttcagcattggaaggatcaaaaaacttccttttgtgttttctcttaggatac---a 3328275  T
Q  115 ttgagagtgtagg---taacacaaatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaactctttgtaacactttcatca 211  Q
    |||||||||| ||   ||  | |||||||||||||||||   ||| |||| |||||| || ||||||||||||||||||||| ||||||||||||||||     
T  3328276 ttgagagtgtgggtgatatgaaaaatgggtagaaattaggacttgttcttttgtaagcttataagctaatttcttgtaactcattgtaacactttcatct 3328375  T
Q  212 tagtggattggagagctgctct 233  Q
    |||||||||| || ||||||||    
T  3328376 tagtggattgaagggctgctct 3328397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 22 - 196
Target Start/End: Complemental strand, 47649828 - 47649653
Alignment:
Q  22 gggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatc-aaaagtttccttttgttttttctcttaggattcattattgaga 120  Q
    ||||||||||||||||||||||||||| ||||| |||||||||||||  ||||||| ||||| |||||||||| ||||||||||||||||| ||||| ||    
T  47649828 gggttgggaaacattgtaaacaccttgggtagttagatttcaccatttgaaggatcaaaaagcttccttttgtgttttctcttaggattca-tattgcga 47649730  T
Q  121 gtgtaggtaacac-aaatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaactcttt 196  Q
    | || ||| |||| ||||||||||||||||| | ||| ||||||| ||| || |||| |||||||||||||||||||    
T  47649729 gagtgggtgacacaaaatgggtagaaattaggtcttgttcttgtggaagcttgtaagttaatttcttgtaactcttt 47649653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 1306231 - 1305996
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaa--cattgtaaacaccttgcgtagtgagatttcaccattgaaaggatcaaaagtttccttttgtttttt 98  Q
    ||||||||| || |||||||||||||||||||  |||||||||||||||| |||||||||||||||||||| |||||||  ||| ||||| |||| | ||    
T  1306231 tctttgtagtgaggatctcttgggttgggaaaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatcttaagcttcctcttgtgtctt 1306132  T
Q  99 ctc--ttaggattcattattgagagtgt-aggtaacacaaatgggtagaaattagatattgctcttgtgtaagtttctaagcta-atttcttgtaactct 194  Q
    |||  ||||| |||| ||||||||| ||  || |||||||||||||||||| ||    ||| ||||||||||| ||  || |||  ||||||||||| ||    
T  1306131 ctcttttagggttca-tattgagagagtggggaaacacaaatgggtagaaactatgacttgttcttgtgtaagcttgcaaactatttttcttgtaaccct 1306033  T
Q  195 ttgtaacactttcatcatagtggattggagagctgct 231  Q
    |||||||||||||||| ||||||||||||||||||||    
T  1306032 ttgtaacactttcatcgtagtggattggagagctgct 1305996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 37466574 - 37466337
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatc-aaaagtttccttttgttttttc 99  Q
    ||||||||| || | |||||| |||||||||||||||||||||| ||| || ||||||||||||||||| || |||| ||||| |||||||||| ||||     
T  37466574 tctttgtagtgaggttctcttaggttgggaaacattgtaaacactttgggttgtgagatttcaccattggaaagatcgaaaagcttccttttgtgtttta 37466475  T
Q  100 tcttaggattcattattgagagtgtagg-------taacacaaatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaact 192  Q
    | |||||||||   ||||||||||  ||       ||  | |||||||||||||||||   ||| |||| |||||| || |||  |||||||||||||||    
T  37466474 ttttaggattc---attgagagtgcgggtgagtgatatgaaaaatgggtagaaattaggacttgttcttttgtaagcttataaattaatttcttgtaact 37466378  T
Q  193 ctttgtaacactttcatcatagtggattggagagctgctct 233  Q
    | |||||||||||||||| ||||||||||||| ||| ||||    
T  37466377 cattgtaacactttcatcttagtggattggagggctactct 37466337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 37725954 - 37725873
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatcaaaag 82  Q
    ||||||||| || |||||||||||| |||||||||| |||||||||||  ||||||||||||||||||||||||||||||||    
T  37725954 tctttgtagtgaggatctcttgggtggggaaacattataaacaccttggatagtgagatttcaccattgaaaggatcaaaag 37725873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 22 - 233
Target Start/End: Complemental strand, 21353821 - 21353608
Alignment:
Q  22 gggttgggaaacattgtaaacaccttgcgtagtgagatt-tcaccattgaaaggatc-aaaagtttccttttgttttttctcttaggattcatt---att 116  Q
    |||||||||||||| |||||||| ||| ||||||||| | ||||||||| ||||||| ||||||||||||| || |||||||||| ||||||||   | |    
T  21353821 gggttgggaaacatcgtaaacactttgggtagtgagaatgtcaccattggaaggatccaaaagtttcctttagtgttttctcttaagattcattgtaagt 21353722  T
Q  117 gagagtgtaggtaacacaaatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaactc-tttgtaacactttcatcatagt 215  Q
    | ||||   || |  | ||||||||||||||||| |  || |||| ||| || |  |  |||||||||||||||||| |||||| |||||||||| ||||    
T  21353721 gtgagt---ggcatgaaaaatgggtagaaattaggttgtgttctt-tgtgagctcttgtgctaatttcttgtaactcatttgtatcactttcatcttagt 21353626  T
Q  216 ggattggagagctgctct 233  Q
    ||||||||||| ||||||    
T  21353625 ggattggagaggtgctct 21353608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 8738874 - 8739114
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaa--cattgtaaacaccttgcgtagtgag-atttcacca-ttgaaaggatcaaaagtttccttttgtttt 96  Q
    ||||||||||||  ||||||||||||||||||  |||||||| ||||||| |||||||| | ||||  | ||||||||||| |||| ||||| | || |     
T  8738874 tctttgtagagagtatctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattagttgaaaggatctaaagcttcctctagtgtc 8738973  T
Q  97 ttctctt--aggattcattat-tgagagtgtaggtaacacaaatgggtagaaattagatattgctcttgtgtaagtttctaagctaat--ttcttgtaac 191  Q
    |||||||  ||| |||||  | ||||||||  || || ||| ||||||||||  |||  |||| ||||||||||| ||  | |||| |  ||||||||||    
T  8738974 ttctcttctagggttcatattgtgagagtgg-ggaaatacatatgggtagaatctagggattgttcttgtgtaagcttgaaggctattgtttcttgtaac 8739072  T
Q  192 tctttgtaacactttcatcatagtggattggagagctgctct 233  Q
     ||||||||||||||||||||| |||||||||||||||||||    
T  8739073 cctttgtaacactttcatcatattggattggagagctgctct 8739114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 9091112 - 9091352
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaa--cattgtaaacaccttgcgtagtgag-atttcacca-ttgaaaggatcaaaagtttccttttgtttt 96  Q
    ||||||||||||  ||||||||||||||||||  |||||||| ||||||| |||||||| | ||||  | ||||||||||| |||| ||||| | || |     
T  9091112 tctttgtagagagtatctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattagttgaaaggatctaaagcttcctctagtgtc 9091211  T
Q  97 ttctctt--aggattcattat-tgagagtgtaggtaacacaaatgggtagaaattagatattgctcttgtgtaagtttctaagctaat--ttcttgtaac 191  Q
    |||||||  ||| |||||  | ||||||||  || || ||| ||||||||||  |||  |||| ||||||||||| ||  | |||| |  ||||||||||    
T  9091212 ttctcttctagggttcatattgtgagagtgg-ggaaatacatatgggtagaatctagggattgttcttgtgtaagcttgaaggctattgtttcttgtaac 9091310  T
Q  192 tctttgtaacactttcatcatagtggattggagagctgctct 233  Q
     ||||||||||||||||||||| |||||||||||||||||||    
T  9091311 cctttgtaacactttcatcatattggattggagagctgctct 9091352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 40372607 - 40372846
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaa--cattgtaaacaccttgcgtagtgag-atttcacca-ttgaaaggatcaaaagtttccttttgtttt 96  Q
    ||||||||||||   |||||||||||||||||  |||||||| ||||||| |||||||| | ||||  | ||| ||||||| |||| ||||| | || |     
T  40372607 tctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaagcttcctctagtgtc 40372706  T
Q  97 ttctctt--aggattcattat-tgagagtgtaggtaacacaaatgggtagaaattagatattgctcttgtgtaagtttctaagctaattt-cttgtaact 192  Q
    |||||||  ||| |||||  | ||||||||  || |||||| ||||||||||  |||   ||| ||||||||||| ||  |||||| ||| ||||||||     
T  40372707 ttctcttttagggttcatattatgagagtgg-ggaaacacatatgggtagaatctagggcttgttcttgtgtaagcttgcaagctatttttcttgtaacc 40372805  T
Q  193 ctttgtaacactttcatcatagtggattggagagctgctct 233  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  40372806 ctttgtaacactttcatcatattggattggagagctgctct 40372846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 181 - 233
Target Start/End: Original strand, 2671585 - 2671637
Alignment:
Q  181 tttcttgtaactctttgtaacactttcatcatagtggattggagagctgctct 233  Q
    ||||||||||| ||||||||||||||||||||| |||||||||||||||||||    
T  2671585 tttcttgtaaccctttgtaacactttcatcatattggattggagagctgctct 2671637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 181 - 233
Target Start/End: Complemental strand, 7167342 - 7167290
Alignment:
Q  181 tttcttgtaactctttgtaacactttcatcatagtggattggagagctgctct 233  Q
    ||||||||||| ||||||||||||||||||||| |||||||||||||||||||    
T  7167342 tttcttgtaaccctttgtaacactttcatcatattggattggagagctgctct 7167290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 181 - 233
Target Start/End: Complemental strand, 8477460 - 8477408
Alignment:
Q  181 tttcttgtaactctttgtaacactttcatcatagtggattggagagctgctct 233  Q
    ||||||||||| ||||||||||||||||||||| |||||||||||||||||||    
T  8477460 tttcttgtaaccctttgtaacactttcatcatattggattggagagctgctct 8477408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 25929203 - 25929317
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatc-aaaagtttc--cttttgttttt 97  Q
    ||||||||| || | ||||||| ||||| ||||||||||||||| ||| |||||||||||||||||| | ||||||| ||||| |||   |||||| |||    
T  25929203 tctttgtagtgaggttctcttgagttggaaaacattgtaaacac-ttgggtagtgagatttcaccatcggaaggatcaaaaagcttctttttttgtgttt 25929301  T
Q  98 tctcttaggattcatt 113  Q
    ||||||||||||||||    
T  25929302 tctcttaggattcatt 25929317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 4386784 - 4386846
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttca 63  Q
    ||||||||| || | ||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  4386784 tctttgtagtgaggttctcttgggttgggaaacattgtaatcaccttgagtagtgagatttca 4386846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 61
Target Start/End: Complemental strand, 27038329 - 27038270
Alignment:
Q  2 ctttgtagagatgatctcttgggttgggaaacattgtaaacaccttgcgtagtgagattt 61  Q
    |||||||| || |||||||||||| |||||||||||||||||||||| || |||||||||    
T  27038329 ctttgtagtgaggatctcttgggtagggaaacattgtaaacaccttgggtggtgagattt 27038270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 134 - 233
Target Start/End: Original strand, 4386869 - 4386968
Alignment:
Q  134 aaatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaactc-tttgtaacactttcatcatagtggattggagagctgctc 232  Q
    ||||| ||||||||||| | ||| |||| ||| || || ||||||||||||||||||| | |||||| |||||| ||| || ||||||||||||||||||    
T  4386869 aaatgagtagaaattaggttttgttctt-tgtgagcttttaagctaatttcttgtaacccatttgtatcacttttatcttattggattggagagctgctc 4386967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 27026985 - 27026925
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaacattgtaaacaccttgcgtagtgagattt 61  Q
    ||||||||  || |||||||||| | |||||||||||||||||||||| ||||||||||||    
T  27026985 tctttgtactgaggatctcttggatagggaaacattgtaaacaccttgggtagtgagattt 27026925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 23392156 - 23392109
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaacattgtaaacaccttg 48  Q
    ||||||||| || | |||||||||||||||||||||||||||||||||    
T  23392156 tctttgtagtgaggttctcttgggttgggaaacattgtaaacaccttg 23392109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 113
Target Start/End: Original strand, 5366146 - 5366244
Alignment:
Q  18 tcttgggttgggaaacatt-gtaaacaccttgcgtagtgagatttcacca-ttgaaaggatc-aaaagtttccttttgttttttctcttaggattcatt 113  Q
    ||||| ||||| ||||||| |||||||||||| ||||| ||||||||  | ||| ||||||| ||||||||||||| || ||||| |||||||||||||    
T  5366146 tcttgagttggaaaacatttgtaaacaccttgggtagtaagatttcaataattggaaggatcgaaaagtttcctttagtgttttcgcttaggattcatt 5366244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 48
Target Start/End: Complemental strand, 5236688 - 5236656
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    |||||||||||||||||||||||||||||||||    
T  5236688 tctcttgggttgggaaacattgtaaacaccttg 5236656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 48
Target Start/End: Complemental strand, 5258376 - 5258344
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    |||||||||||||||||||||||||||||||||    
T  5258376 tctcttgggttgggaaacattgtaaacaccttg 5258344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 48
Target Start/End: Complemental strand, 5260555 - 5260523
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    |||||||||||||||||||||||||||||||||    
T  5260555 tctcttgggttgggaaacattgtaaacaccttg 5260523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 48
Target Start/End: Original strand, 9581219 - 9581251
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    |||||||||||||||||||||||||||||||||    
T  9581219 tctcttgggttgggaaacattgtaaacaccttg 9581251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 48
Target Start/End: Complemental strand, 19684121 - 19684089
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    |||||||||||||||||||||||||||||||||    
T  19684121 tctcttgggttgggaaacattgtaaacaccttg 19684089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 48
Target Start/End: Complemental strand, 23198169 - 23198137
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    |||||||||||||||||||||||||||||||||    
T  23198169 tctcttgggttgggaaacattgtaaacaccttg 23198137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 48
Target Start/End: Complemental strand, 23200368 - 23200336
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    |||||||||||||||||||||||||||||||||    
T  23200368 tctcttgggttgggaaacattgtaaacaccttg 23200336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 233
Target Start/End: Original strand, 28501697 - 28501748
Alignment:
Q  181 tttcttgtaactctttgtaacactttcatcatagtggattggagagctgctct 233  Q
    |||||||||||  |||||||||||||| ||||| |||||||||||||||||||    
T  28501697 tttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctct 28501748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 233
Target Start/End: Original strand, 28503864 - 28503915
Alignment:
Q  181 tttcttgtaactctttgtaacactttcatcatagtggattggagagctgctct 233  Q
    |||||||||||  |||||||||||||| ||||| |||||||||||||||||||    
T  28503864 tttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctct 28503915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 167 - 233
Target Start/End: Complemental strand, 29100273 - 29100205
Alignment:
Q  167 agtttctaagctaatttcttgtaac-tctttgtaacact-ttcatcatagtggattggagagctgctct 233  Q
    ||||| |||||||||||||| |||| |||||||| |||| || ||||||||||| ||||||||||||||    
T  29100273 agtttttaagctaatttcttataacctctttgtatcactctttatcatagtggaatggagagctgctct 29100205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 48
Target Start/End: Original strand, 29682295 - 29682327
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    |||||||||||||||||||||||||||||||||    
T  29682295 tctcttgggttgggaaacattgtaaacaccttg 29682327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 48
Target Start/End: Complemental strand, 39153593 - 39153561
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    |||||||||||||||||||||||||||||||||    
T  39153593 tctcttgggttgggaaacattgtaaacaccttg 39153561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 48
Target Start/End: Original strand, 40734434 - 40734466
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    |||||||||||||||||||||||||||||||||    
T  40734434 tctcttgggttgggaaacattgtaaacaccttg 40734466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 48
Target Start/End: Original strand, 44331481 - 44331513
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    |||||||||||||||||||||||||||||||||    
T  44331481 tctcttgggttgggaaacattgtaaacaccttg 44331513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 48
Target Start/End: Original strand, 45095101 - 45095133
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    |||||||||||||||||||||||||||||||||    
T  45095101 tctcttgggttgggaaacattgtaaacaccttg 45095133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 173 - 219
Target Start/End: Original strand, 5366304 - 5366351
Alignment:
Q  173 taagctaatttcttgtaac-tctttgtaacactttcatcatagtggat 219  Q
    |||| |||||||||||||| |||||||| |||||||||||||||||||    
T  5366304 taagataatttcttgtaacctctttgtatcactttcatcatagtggat 5366351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 182 - 233
Target Start/End: Original strand, 22173184 - 22173234
Alignment:
Q  182 ttcttgtaactctttgtaacactttcatcatagtggattggagagctgctct 233  Q
    ||||||||||  |||||||||||||| ||||| |||||||||||||||||||    
T  22173184 ttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctct 22173234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 23410576 - 23410529
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaacattgtaaacaccttg 48  Q
    ||||||||| || | ||||||||||||| |||||||||||||||||||    
T  23410576 tctttgtagtgaggttctcttgggttggaaaacattgtaaacaccttg 23410529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 16 - 47
Target Start/End: Original strand, 37408395 - 37408426
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacacctt 47  Q
    ||||||||||||||||||||||||||||||||    
T  37408395 tctcttgggttgggaaacattgtaaacacctt 37408426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 195 - 226
Target Start/End: Original strand, 39039995 - 39040026
Alignment:
Q  195 ttgtaacactttcatcatagtggattggagag 226  Q
    ||||||||||||||||||||||||||||||||    
T  39039995 ttgtaacactttcatcatagtggattggagag 39040026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 233
Target Start/End: Complemental strand, 18656530 - 18656481
Alignment:
Q  183 tcttgtaactctttgtaacactttcatcatagtggattggagagctgctct 233  Q
    |||||||||  |||||||||||||| ||||| |||||||||||||||||||    
T  18656530 tcttgtaaccttttgtaacactttc-tcatattggattggagagctgctct 18656481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 233
Target Start/End: Original strand, 2672910 - 2672970
Alignment:
Q  173 taagctaatttcttgtaactcttt-gtaacactttcatcatagtggattggagagctgctct 233  Q
    |||||||  ||||||||||||||| ||||||| |||| |||| |||||||||||||||||||    
T  2672910 taagctagattcttgtaactcttttgtaacacattca-catattggattggagagctgctct 2672970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 233
Target Start/End: Original strand, 2677066 - 2677126
Alignment:
Q  173 taagctaatttcttgtaactcttt-gtaacactttcatcatagtggattggagagctgctct 233  Q
    |||||||  ||||||||||||||| ||||||| |||| |||| |||||||||||||||||||    
T  2677066 taagctagattcttgtaactcttttgtaacacattca-catattggattggagagctgctct 2677126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 233
Target Start/End: Complemental strand, 8512323 - 8512263
Alignment:
Q  173 taagctaatttcttgtaactcttt-gtaacactttcatcatagtggattggagagctgctct 233  Q
    |||||||  ||||||||||||||| ||||||| |||| |||| |||||||||||||||||||    
T  8512323 taagctagattcttgtaactcttttgtaacacattca-catattggattggagagctgctct 8512263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 233
Target Start/End: Complemental strand, 8517203 - 8517143
Alignment:
Q  173 taagctaatttcttgtaactcttt-gtaacactttcatcatagtggattggagagctgctct 233  Q
    |||||||  ||||||||||||||| ||||||| |||| |||| |||||||||||||||||||    
T  8517203 taagctagattcttgtaactcttttgtaacacattca-catattggattggagagctgctct 8517143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 233
Target Start/End: Original strand, 25929435 - 25929484
Alignment:
Q  185 ttgtaactc-tttgtaacactttcatcatagtggattggagagctgctct 233  Q
    ||||||||| |||||| |||||||||| ||||||||||||| ||||||||    
T  25929435 ttgtaactcatttgtatcactttcatcttagtggattggagggctgctct 25929484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 48
Target Start/End: Original strand, 760783 - 760815
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    ||||||||||||||||||||| |||||||||||    
T  760783 tctcttgggttgggaaacattataaacaccttg 760815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 48
Target Start/End: Original strand, 7764404 - 7764436
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    ||||||||||| |||||||||||||||||||||    
T  7764404 tctcttgggttaggaaacattgtaaacaccttg 7764436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 48
Target Start/End: Complemental strand, 9636358 - 9636326
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    ||||||||||||||||| |||||||||||||||    
T  9636358 tctcttgggttgggaaatattgtaaacaccttg 9636326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 48
Target Start/End: Original strand, 29810808 - 29810836
Alignment:
Q  20 ttgggttgggaaacattgtaaacaccttg 48  Q
    |||||||||||||||||||||||||||||    
T  29810808 ttgggttgggaaacattgtaaacaccttg 29810836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 44
Target Start/End: Original strand, 31314381 - 31314409
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacac 44  Q
    |||||||||||||||||||||||||||||    
T  31314381 tctcttgggttgggaaacattgtaaacac 31314409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 173 - 233
Target Start/End: Complemental strand, 32475589 - 32475531
Alignment:
Q  173 taagctaatttcttgtaactctttgtaacactttcatcatagtggattggagagctgctct 233  Q
    |||||||  ||||||||||||||||||| || |||| |||| |||||||||||||||||||    
T  32475589 taagctagattcttgtaactctttgtaa-acattca-catattggattggagagctgctct 32475531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 173 - 233
Target Start/End: Complemental strand, 32480447 - 32480389
Alignment:
Q  173 taagctaatttcttgtaactctttgtaacactttcatcatagtggattggagagctgctct 233  Q
    |||||||  ||||||||||||||||||| || |||| |||| |||||||||||||||||||    
T  32480447 taagctagattcttgtaactctttgtaa-acattca-catattggattggagagctgctct 32480389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 44
Target Start/End: Complemental strand, 32744658 - 32744630
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacac 44  Q
    |||||||||||||||||||||||||||||    
T  32744658 tctcttgggttgggaaacattgtaaacac 32744630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 48
Target Start/End: Original strand, 32891039 - 32891071
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    ||||||||| |||||||||||||||||||||||    
T  32891039 tctcttggggtgggaaacattgtaaacaccttg 32891071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 48
Target Start/End: Original strand, 40735319 - 40735351
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    ||||||||||| |||||||||||||||||||||    
T  40735319 tctcttgggttaggaaacattgtaaacaccttg 40735351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 181; Significance: 9e-98; HSPs: 61)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 181; E-Value: 9e-98
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 36315048 - 36315280
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatcaaaagtttccttttgttttttct 100  Q
    |||||||||||| ||||||||||||||||||||||||||||||| ||| |||||||||||| ||||||| |||||||||||| |||||||||| |||| |    
T  36315048 tctttgtagagaggatctcttgggttgggaaacattgtaaacacattgggtagtgagatttaaccattggaaggatcaaaagcttccttttgtgtttttt 36315147  T
Q  101 cttaggattcattattgagagtgtaggtaacacaaatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaactctttgtaa 200  Q
    | |||||||||||||||||||||| ||||||||||||||||||||||||| | ||||||||||||||| |||||||||||||||||||||||||||||||    
T  36315148 cgtaggattcattattgagagtgtgggtaacacaaatgggtagaaattaggtcttgctcttgtgtaagcttctaagctaatttcttgtaactctttgtaa 36315247  T
Q  201 cactttcatcatagtggattggagagctgctct 233  Q
    |||||||||||||||||||||||||||||||||    
T  36315248 cactttcatcatagtggattggagagctgctct 36315280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 181; E-Value: 9e-98
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 36329257 - 36329489
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatcaaaagtttccttttgttttttct 100  Q
    |||||||||||| ||||||||||||||||||||||||||||||| ||| |||||||||||| ||||||| |||||||||||| |||||||||| |||| |    
T  36329257 tctttgtagagaggatctcttgggttgggaaacattgtaaacacattgggtagtgagatttaaccattggaaggatcaaaagcttccttttgtgtttttt 36329356  T
Q  101 cttaggattcattattgagagtgtaggtaacacaaatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaactctttgtaa 200  Q
    | |||||||||||||||||||||| ||||||||||||||||||||||||| | ||||||||||||||| |||||||||||||||||||||||||||||||    
T  36329357 cgtaggattcattattgagagtgtgggtaacacaaatgggtagaaattaggtcttgctcttgtgtaagcttctaagctaatttcttgtaactctttgtaa 36329456  T
Q  201 cactttcatcatagtggattggagagctgctct 233  Q
    |||||||||||||||||||||||||||||||||    
T  36329457 cactttcatcatagtggattggagagctgctct 36329489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 10047660 - 10047425
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatc-aaaagtttccttttgttttttc 99  Q
    ||||||||  || ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| ||||  |||||||||| ||||     
T  10047660 tctttgtaatgaggatctcttgggttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaaaacttccttttgtgttttg 10047561  T
Q  100 tcttaggattcattattgagagtgtaggtaacac-aaatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaactc-tttg 197  Q
    ||||||||||||||||||||||||| ||| |||| ||||||||||||||||| | ||| ||||||||||| || ||||||||||||||||||||| ||||    
T  10047560 tcttaggattcattattgagagtgtgggtgacacaaaatgggtagaaattaggtcttgttcttgtgtaagcttataagctaatttcttgtaactcttttg 10047461  T
Q  198 taacactttcatcatagtggattggagagctgctct 233  Q
    ||||||||||||||||||||||||||| ||||||||    
T  10047460 taacactttcatcatagtggattggagggctgctct 10047425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 3777828 - 3777595
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatcaaaa-gtttccttttgttttttc 99  Q
    ||||||||| || ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || |||||||| | |||||||||| |||||    
T  3777828 tctttgtagtgaggatctcttgggttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaatgatcaaaaagcttccttttgtattttc 3777729  T
Q  100 tcttaggattcattattgagagtgtaggtaacacaaa-tgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaactctttgt 198  Q
    ||||||||||||| |||| ||| || ||| ||||||| |||||||||||||||| ||| ||||||||||||||  |||||| ||||||||||||||||||    
T  3777728 tcttaggattcat-attgtgagagtgggtgacacaaaatgggtagaaattagatcttgttcttgtgtaagtttgcaagctattttcttgtaactctttgt 3777630  T
Q  199 aacactttcatcatagtggattggagagctgctct 233  Q
    |||||||||||||||||||||||||||||| ||||    
T  3777629 aacactttcatcatagtggattggagagctactct 3777595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 16623111 - 16623344
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatcaaaagtttccttttgttttttct 100  Q
    ||||||||| || ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| |||||||||| ||||||    
T  16623111 tctttgtagtgaggatctcttgggttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaagcttccttttgtgttttct 16623210  T
Q  101 cttaggattcattattgagagtgtaggtaacac-aaatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaactc-tttgt 198  Q
     |||||||||| ||||| ||| || ||| |||| ||||||||||||||||| | ||| |||| |||||| || | ||||||||||||||||||| |||||    
T  16623211 tttaggattca-tattgtgagagtgggtgacacaaaatgggtagaaattaggtcttgttcttctgtaagcttattagctaatttcttgtaactcttttgt 16623309  T
Q  199 aacactttcatcatagtggattggagagctgctct 233  Q
    |||||||||||||||||||||||||||||||||||    
T  16623310 aacactttcatcatagtggattggagagctgctct 16623344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 5396489 - 5396722
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatcaaaagtttccttttgttttttct 100  Q
    ||||||||| || ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| |||||||| || ||||||| | ||||    
T  5396489 tctttgtagtgaggatctcttgggttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaagaatcaaaagctttcttttgtgtcttct 5396588  T
Q  101 ctt-aggattcattattgagagtgtaggtaacacaaatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaactctttgta 199  Q
    ||| ||| ||||| |||||||| ||  |||||||||||||||||||||||| | ||| ||||||||||| ||  |||||| ||||||||||||||||| |    
T  5396589 ctttagggttcatcattgagagagtgagtaacacaaatgggtagaaattaggtcttgttcttgtgtaagcttgcaagctattttcttgtaactctttgca 5396688  T
Q  200 acactttcatcatagtggattggagagctgctct 233  Q
    ||||||||||||||||||||||||||||||||||    
T  5396689 acactttcatcatagtggattggagagctgctct 5396722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 6743233 - 6743466
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatcaaaagtttccttttgttttttct 100  Q
    ||||||||| || ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| |||||||||||  |||||||||| ||||||    
T  6743233 tctttgtagcgaggatctcttgggttgggaaacattgtaaacaccttgggtaatgagatttcaccattggaaggatcaaaaacttccttttgtgttttct 6743332  T
Q  101 cttaggattcattattgagagtgtaggtaacac-aaatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaactc-tttgt 198  Q
    |||||||||||||||||||||||| ||| |||| ||||||||||||||||| | ||| |||| ||||||  | ||||||||||| ||||| ||| |||||    
T  6743333 cttaggattcattattgagagtgtgggtgacacaaaatgggtagaaattaggtcttgttcttttgtaag-ctataagctaattttttgtagctcttttgt 6743431  T
Q  199 aacactttcatcatagtggattggagagctgctct 233  Q
    |||||||||||||||||||||||||| ||||||||    
T  6743432 aacactttcatcatagtggattggagggctgctct 6743466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 38152256 - 38152490
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatcaaaagtttccttttgttttttct 100  Q
    ||||||||| || ||||||||||| ||||||| ||||||||||||||| ||||||| | |||||||||| |||||||||||| |||| ||||| ||||||    
T  38152256 tctttgtagtgaggatctcttgggatgggaaatattgtaaacaccttgggtagtgacaattcaccattggaaggatcaaaagcttccatttgtgttttct 38152355  T
Q  101 cttaggattcattattgagagtgtaggtaacac-aaatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaactc-tttgt 198  Q
    |||||||||||||||||||||||| ||| |||| |||| |||||||||||| | ||| ||||||||||| || |||||||||||||| |||||| |||||    
T  38152356 cttaggattcattattgagagtgtgggtgacacaaaattggtagaaattaggtcttgttcttgtgtaagcttataagctaatttcttataactcttttgt 38152455  T
Q  199 aacactttcatcatagtggattggagagctgctct 233  Q
    |||||||||| ||||||||||||||||||||||||    
T  38152456 aacactttcaccatagtggattggagagctgctct 38152490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 5269018 - 5269242
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatc-aaaagtttccttttgttttttc 99  Q
    ||||||||| || |||||||||||||||||||||||||||||||||||  ||||||||||||||||||| ||||||| ||||| |||||||||| |||||    
T  5269018 tctttgtagtgaggatctcttgggttgggaaacattgtaaacaccttggatagtgagatttcaccattggaaggatcaaaaagcttccttttgtgttttc 5269117  T
Q  100 tcttaggattcattattgagagtgtaggtaacaca-aatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaactctttgt 198  Q
    ||||||||||||||||||||||||| ||| ||||| |||||||||||||||| | ||| ||||||||||| || ||||||||||||          ||||    
T  5269118 tcttaggattcattattgagagtgtgggtgacacacaatgggtagaaattaggtcttgttcttgtgtaagcttataagctaatttc----------ttgt 5269207  T
Q  199 aacactttcatcatagtggattggagagctgctct 233  Q
    |||||||||||||||||||||||||| ||||||||    
T  5269208 aacactttcatcatagtggattggagggctgctct 5269242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 8689314 - 8689509
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatcaaaagtttccttttgttttttct 100  Q
    ||||||||| || ||||||||||||||||||||||| |||||||||||  ||||||||||||||||||| ||||||||||||||||||||||| | ||||    
T  8689314 tctttgtagtgaggatctcttgggttgggaaacattttaaacaccttggatagtgagatttcaccattggaaggatcaaaagtttccttttgtgtcttct 8689413  T
Q  101 cttaggattcattattgagagtgtaggtaacacaaatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaactcttt 196  Q
    |||||| ||||| |||||||| || || ||||||||| |||||||||||| | ||| ||||||||||| ||  |||||| ||||||||||| ||||    
T  8689414 cttagggttcatcattgagagagtgggaaacacaaattggtagaaattaggtcttgttcttgtgtaagcttgcaagctattttcttgtaacacttt 8689509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 14 - 233
Target Start/End: Original strand, 31985464 - 31985685
Alignment:
Q  14 gatctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatcaaaagtttccttttgttttttctctt--aggattca 111  Q
    ||||||||||||||||||||||||||||||||||| ||||||| |||||||||| | |||||||||||| |||||||||| | |||||||  ||| ||||    
T  31985464 gatctcttgggttgggaaacattgtaaacaccttgggtagtgaaatttcaccatgggaaggatcaaaagcttccttttgtgtcttctcttttagggttca 31985563  T
Q  112 ttattgagagtgtaggtaacacaaatgggtagaaattagatattgctcttgtgtaagtttctaagctaattt-cttgtaactctttgtaacactttcatc 210  Q
      |||| ||| || || ||||||||||||||||||||||   ||| ||||||||||| ||  |||||| ||| |||||||| ||||||||||||||||||    
T  31985564 c-attgtgagagtgggaaacacaaatgggtagaaattaggacttgttcttgtgtaagcttgcaagctatttttcttgtaaccctttgtaacactttcatc 31985662  T
Q  211 atagtggattggagagctgctct 233  Q
    |||||||||||||||||||||||    
T  31985663 atagtggattggagagctgctct 31985685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 42599392 - 42599623
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatcaaaagt-ttccttttgttttttc 99  Q
    ||||||||| || | |||||| |||||||||||||| ||||||||||| |||||||||||||||||||| |||||| ||||   |||||||||| |||||    
T  42599392 tctttgtagtgaggttctcttcggttgggaaacattctaaacaccttgggtagtgagatttcaccattggaaggataaaaaaacttccttttgtgttttc 42599491  T
Q  100 tcttaggattcattattgagagtgtaggtaacacaaa-tgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaactctttgt 198  Q
    ||||||||||||||   |||||||  ||| ||||||| |||||||||||||| | ||| |||| |||||| || ||||||||||||||||||||| ||||    
T  42599492 tcttaggattcatt---gagagtgcgggtgacacaaaatgggtagaaattaggtcttgttcttttgtaagcttataagctaatttcttgtaactcattgt 42599588  T
Q  199 aacactttcatcatagtggattggagagctgctct 233  Q
    |||| ||||||| ||||||||||||| | ||||||    
T  42599589 aacattttcatcttagtggattggagggttgctct 42599623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 22 - 233
Target Start/End: Complemental strand, 24334069 - 24333855
Alignment:
Q  22 gggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatc-aaaagtttccttttgttttttctcttaggattcattattgaga 120  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| ||||| |||||||||| ||||||||||||||||| ||||| ||    
T  24334069 gggttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaaagcttccttttgtgttttctcttaggattca-tattgtga 24333971  T
Q  121 gtgtaggtaacac-aaatgggtagaaatta-gatattgctcttgtgtaagtttctaagctaatttcttgtaactc-tttgtaacactttcatcatagtgg 217  Q
    | || | | |||| |||||||||||||||| | | ||  ||||||||||| || ||||||||||| || |||||| |||||||||| |||||||||||||    
T  24333970 gagtggctgacacaaaatgggtagaaattaggttttttttcttgtgtaagcttgtaagctaattttttataactcttttgtaacacgttcatcatagtgg 24333871  T
Q  218 attggagagctgctct 233  Q
    ||||||||||||||||    
T  24333870 attggagagctgctct 24333855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 25861851 - 25862046
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatc-aaaagtttccttttgt-ttttt 98  Q
    ||||||||| || ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| ||||  |||||||||| |||||    
T  25861851 tctttgtagtgaggatctcttgggttgggaaacattgtaaacaccttgagtagtgagatttcaccattggaaggatcaaaaaacttccttttgtgttttt 25861950  T
Q  99 ctcttaggattcattattgagagtgtaggtaacac-aaatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaactcttt 196  Q
    ||||||||||||   ||||||||||| ||| |||| |||||||||| |||||| | ||| ||||||||||| || ||||||||||||||||||| ||||    
T  25861951 ctcttaggattc---attgagagtgtgggtgacacaaaatgggtaggaattaggtcttgttcttgtgtaagcttataagctaatttcttgtaacacttt 25862046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 16628690 - 16628839
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatcaaaagtttccttttgttttttct 100  Q
    ||||||||| || ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| |||||||||| ||||||    
T  16628690 tctttgtagtgaggatctcttgggttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaagcttccttttgtgttttct 16628789  T
Q  101 cttaggattcattattgagagtgtaggtaacac-aaatgggtagaaattag 150  Q
     |||||||||| ||||| ||| || ||| |||| |||||||||||||||||    
T  16628790 tttaggattca-tattgtgagagtgggtgacacaaaatgggtagaaattag 16628839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 5143539 - 5143305
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatcaaaagtttccttttgttttttct 100  Q
    ||||||||| || |||||||||| ||||||||| |||||||||||||  |||||||||||||||||||| |||||||| ||| |||||||||| ||||||    
T  5143539 tctttgtagtgaggatctcttggattgggaaactttgtaaacaccttaggtagtgagatttcaccattggaaggatcataagcttccttttgtgttttct 5143440  T
Q  101 c-ttaggattcattattgagagtgtaggtaacac-aaatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgt-aactctttg 197  Q
    | ||||| |||| ||||  ||| || | | |||| ||||| ||||||||||| | ||| ||||||||| | ||  |||||| |||||||| || | ||||    
T  5143439 ctttagggttca-tattctgagagtggctgacacaaaatgagtagaaattaggtcttgttcttgtgtatgcttgcaagctattttcttgtaaattttttg 5143341  T
Q  198 taacactttcatcatagtggattggagagctgctct 233  Q
    |||||||||||||||||||| |||||||||||||||    
T  5143340 taacactttcatcatagtgggttggagagctgctct 5143305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 5147957 - 5147724
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatcaaaagtttccttttgttttttct 100  Q
    |||||||||  | ||||||||| ||||||||||||||||||||| |||  || |||||||||||||||| |||||||| ||| |||||||||| ||||||    
T  5147957 tctttgtagtaaggatctcttgagttgggaaacattgtaaacacattggataatgagatttcaccattggaaggatcataagcttccttttgtgttttct 5147858  T
Q  101 c-ttaggattcattattgagagtgtaggtaacac-aaatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaact-ctttg 197  Q
    | ||||| |||| ||||| |||  | ||| |||| |||||||||||||||||   ||| ||||||||||| ||  |||||| ||||||||||||  ||||    
T  5147857 ctttagggttca-tattgtgagaatgggtgacacaaaatgggtagaaattaggccttgttcttgtgtaagcttgcaagctattttcttgtaactattttg 5147759  T
Q  198 taacactttcatcatagtggattggagagctgctc 232  Q
    |||||||||||||||| |||| |||||||||||||    
T  5147758 taacactttcatcataatggactggagagctgctc 5147724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 16 - 233
Target Start/End: Complemental strand, 5112501 - 5112283
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatc-aaaagtttccttttgttttttctcttaggattcatta 114  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| ||||| |||||||| | ||||||||||||||||   |    
T  5112501 tctcttgggttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaaagcttccttttatgttttctcttaggattc---a 5112405  T
Q  115 ttgagagtgtaggtaac---acaaatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaactc-tttgtaacactttcatc 210  Q
    ||| ||||||  || ||   | |||| |||| ||||||| | | | | || | | ||||| ||||||||||||||||||| | ||||||||||||||||     
T  5112404 ttgtgagtgtgagtgacttaaaaaataggtacaaattaggtctcg-ttttttatgagtttttaagctaatttcttgtaacccatttgtaacactttcata 5112306  T
Q  211 atagtggattggagagctgctct 233  Q
     ||||||||||||||||||||||    
T  5112305 ttagtggattggagagctgctct 5112283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 16 - 233
Target Start/End: Original strand, 39774138 - 39774356
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatc-aaaagtttccttttgttttttctcttaggattcatta 114  Q
    ||||||| ||||||||||||||||||||||||| |||||||| ||||||||||| || |||| ||||| |||||||||| ||||||||| ||||||   |    
T  39774138 tctcttgagttgggaaacattgtaaacaccttgggtagtgagttttcaccattggaatgatcaaaaagcttccttttgtattttctcttgggattc---a 39774234  T
Q  115 ttgagagtgtaggtaaca--caaatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaa-ctctttgtaacactttcatca 211  Q
    ||||||||||  || |||   |||| |||||||||||| | ||| |  | ||| || || |||||||||||||||||| || |||||| |||||||||      
T  39774235 ttgagagtgtgagtgacatgaaaattggtagaaattaggtcttgtttctttgtgagcttttaagctaatttcttgtaacctatttgtatcactttcattt 39774334  T
Q  212 tagtggattggagagctgctct 233  Q
    ||||||||||||||||||||||    
T  39774335 tagtggattggagagctgctct 39774356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 35 - 233
Target Start/End: Complemental strand, 54867427 - 54867229
Alignment:
Q  35 ttgtaaacaccttgcgtagtgagatttcaccattgaaaggatcaaaag--tttcctttt-gttttttctcttaggattcattattgagagtgtaggtaac 131  Q
    ||||||||||  || |||||||||||||||||||| |||||||||||   |||| |||| || |||||||||||||||||||     |||||| | | ||    
T  54867427 ttgtaaacactatgggtagtgagatttcaccattggaaggatcaaaaagctttcttttttgtgttttctcttaggattcatt-----gagtgtggatgac 54867333  T
Q  132 acaaa-tgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaact-ctttgtaacactttcatcatagtggattggagagctg 229  Q
    ||||| |||||||||||||| ||||| ||||||||||| || |||||||||||||| |||||  ||||||||| |||||||||||| ||||| || ||||    
T  54867332 acaaaatgggtagaaattaggtattgttcttgtgtaagcttataagctaatttcttataactattttgtaacattttcatcatagttgattgaagggctg 54867233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 28468352 - 28468580
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaacat--tgtaaacaccttgcgtagtgagatttcaccattgaaaggatcaaaagtttccttttgtttttt 98  Q
    ||||||||| || ||||||||||||||||||| ||  ||||||||||||| |||||||||||||||||||| ||||||| |||| ||||| |||| | ||    
T  28468352 tctttgtagtgaggatctcttgggttgggaaaaatattgtaaacaccttgggtagtgagatttcaccattggaaggatctaaagcttcctcttgtgtctt 28468451  T
Q  99 ctc--ttaggattcattattgagagtgt-aggtaacacaaatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaactctt 195  Q
    |||  ||||| |||| ||||||||| ||  || |||||||||||||||||  ||| | ||| | ||||||||| ||  || ||| |||        |  |    
T  28468452 ctcttttagggttca-tattgagagagtggggaaacacaaatgggtagaatctaggtcttgttattgtgtaagcttgcaaactatttt--------ttct 28468542  T
Q  196 tgtaacactttcatcatagtggattggagagctgctct 233  Q
    ||||||||||||||||||||||||||||||||||||||    
T  28468543 tgtaacactttcatcatagtggattggagagctgctct 28468580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 145 - 229
Target Start/End: Original strand, 16630642 - 16630727
Alignment:
Q  145 aattagatattgctcttgtgtaagtttctaagctaatttcttgtaactc-tttgtaacactttcatcatagtggattggagagctg 229  Q
    |||||||| ||| ||||||||||| || ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  16630642 aattagatcttgttcttgtgtaagcttataagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagagctg 16630727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 134 - 233
Target Start/End: Original strand, 3796470 - 3796570
Alignment:
Q  134 aaatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaactc-tttgtaacactttcatcatagtggattggagagctgctc 232  Q
    ||||||||||||||||| | ||| ||||||| ||| || ||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| |||||    
T  3796470 aaatgggtagaaattaggtcttgttcttgtgcaagcttgtaagctaatttcttgtaactcttttgtaacactttcatcatagtggattagagagttgctc 3796569  T
Q  233 t 233  Q
    |    
T  3796570 t 3796570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 16 - 226
Target Start/End: Complemental strand, 37782128 - 37781915
Alignment:
Q  16 tctcttgggttgggaaacatt-gtaaacaccttgcgtagtgagatttcaccattgaaaggatc-aaaagtttccttttgttttttctcttaggattcatt 113  Q
    ||||||||||||| ||||||| |||||||||||| ||||||||||||||  |||| ||| ||| |||||| || ||| || |||||||||| |||||||     
T  37782128 tctcttgggttggaaaacatttgtaaacaccttgggtagtgagatttcattattggaagaatcaaaaagtctcttttagtgttttctcttaagattcat- 37782030  T
Q  114 attgagagtgtaggtaac---acaaatgggtagaaatt-agatattgctcttgtgtaagtttctaagctaatttcttgtaa-ctctttgtaacactttca 208  Q
     ||  |||||||||| ||   | ||||||||||||||| |||| ||| |||| ||| ||||| |||||||||||||||||| ||||||||| |||||| |    
T  37782029 -ttacgagtgtaggtgacttgaaaaatgggtagaaattaagat-ttgttctt-tgtgagtttttaagctaatttcttgtaacctctttgtatcactttta 37781933  T
Q  209 tcatagtggattggagag 226  Q
    | ||||||||||||||||    
T  37781932 ttatagtggattggagag 37781915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 22 - 112
Target Start/End: Original strand, 3793919 - 3794010
Alignment:
Q  22 gggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatc-aaaagtttccttttgttttttctcttaggattcat 112  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||| ||||||||| ||||| |||||||||| ||| ||||||||||||||    
T  3793919 gggttggaaaacattgtaaacaccttgggtagtgagatttcaccatagaaaggatcaaaaagcttccttttgtgtttgctcttaggattcat 3794010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 1983118 - 1983349
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaacattgtaaacaccttgcgtagtgagattt-caccattgaaaggatcaaaa-gtttccttttgtttttt 98  Q
    ||||||||| || | | |||||||||| | ||||||||||||||| ||  |||| |||||| |||||||| |||||| |||| | |||||||||  ||||    
T  1983118 tctttgtagtgaggttatcttgggttgtgtaacattgtaaacaccctggttagtaagattttcaccattggaaggataaaaaagcttccttttgggtttt 1983217  T
Q  99 ctcttaggattcattattgagagtgtaggtaac--acaaatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaa-ctctt 195  Q
    ||||||||||||   ||||||||||||||| ||    ||| || |||||||||  | ||| |||| ||| || ||  ||||||||||||||||| | |||    
T  1983218 ctcttaggattc---attgagagtgtaggtgacttgaaaaaggatagaaattatgttttgttctt-tgtgagcttgcaagctaatttcttgtaacccctt 1983313  T
Q  196 tgtaacactttcatcatagtggattggagagctgct 231  Q
    |||| |||||| ||| ||||||||||||||||||||    
T  1983314 tgtatcactttgatcctagtggattggagagctgct 1983349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 233
Target Start/End: Complemental strand, 18377636 - 18377405
Alignment:
Q  3 tttgtagagatgatctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatc-aaaagtttccttttgttttttctc 101  Q
    ||||||| || | ||||||||| ||| ||||||||||||| ||||| ||| |||||||| ||||||| ||||||| ||||| ||| |||||| |||| ||    
T  18377636 tttgtagtgaggttctcttgggatggaaaacattgtaaaccccttgggtaatgagattttaccattggaaggatcaaaaagcttcattttgtgttttttc 18377537  T
Q  102 ttaggattcattattgagagtgtaggtaaca--caaatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaactc-tttgt 198  Q
    |||||||||   ||||  ||||| ||| |||   |||||||||||||||||   ||| |  | ||| || || |||||| ||||||| |||| | |||||    
T  18377536 ttaggattc---attgtaagtgtgggtgacatgaaaatgggtagaaattagggcttgtttctttgtgagcttttaagctgatttcttataacccatttgt 18377440  T
Q  199 aacactttcatcatagtggattggagagctgctct 233  Q
    | |||||||||| ||||||| ||||| ||||||||    
T  18377439 atcactttcatcttagtggaatggagggctgctct 18377405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 181 - 233
Target Start/End: Complemental strand, 24742038 - 24741986
Alignment:
Q  181 tttcttgtaactctttgtaacactttcatcatagtggattggagagctgctct 233  Q
    ||||||||||| ||||||||||||||||||||| |||||||||||||||||||    
T  24742038 tttcttgtaaccctttgtaacactttcatcatattggattggagagctgctct 24741986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 181 - 233
Target Start/End: Complemental strand, 29760739 - 29760687
Alignment:
Q  181 tttcttgtaactctttgtaacactttcatcatagtggattggagagctgctct 233  Q
    ||||||||||| ||||||||||||||||||||| |||||||||||||||||||    
T  29760739 tttcttgtaaccctttgtaacactttcatcatattggattggagagctgctct 29760687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 180 - 233
Target Start/End: Complemental strand, 39246094 - 39246040
Alignment:
Q  180 atttcttgtaactcttt-gtaacactttcatcatagtggattggagagctgctct 233  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  39246094 atttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctct 39246040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 48
Target Start/End: Original strand, 5429615 - 5429647
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    |||||||||||||||||||||||||||||||||    
T  5429615 tctcttgggttgggaaacattgtaaacaccttg 5429647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 48
Target Start/End: Original strand, 5871756 - 5871788
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    |||||||||||||||||||||||||||||||||    
T  5871756 tctcttgggttgggaaacattgtaaacaccttg 5871788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 48
Target Start/End: Complemental strand, 6542413 - 6542381
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    |||||||||||||||||||||||||||||||||    
T  6542413 tctcttgggttgggaaacattgtaaacaccttg 6542381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 48
Target Start/End: Complemental strand, 9927689 - 9927657
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    |||||||||||||||||||||||||||||||||    
T  9927689 tctcttgggttgggaaacattgtaaacaccttg 9927657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 48
Target Start/End: Complemental strand, 13009663 - 13009631
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    |||||||||||||||||||||||||||||||||    
T  13009663 tctcttgggttgggaaacattgtaaacaccttg 13009631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 48
Target Start/End: Complemental strand, 13992517 - 13992485
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    |||||||||||||||||||||||||||||||||    
T  13992517 tctcttgggttgggaaacattgtaaacaccttg 13992485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 48
Target Start/End: Original strand, 37740562 - 37740594
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    |||||||||||||||||||||||||||||||||    
T  37740562 tctcttgggttgggaaacattgtaaacaccttg 37740594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 48
Target Start/End: Complemental strand, 45687415 - 45687383
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    |||||||||||||||||||||||||||||||||    
T  45687415 tctcttgggttgggaaacattgtaaacaccttg 45687383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 48
Target Start/End: Original strand, 48142978 - 48143010
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    |||||||||||||||||||||||||||||||||    
T  48142978 tctcttgggttgggaaacattgtaaacaccttg 48143010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 48
Target Start/End: Complemental strand, 52082889 - 52082857
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    |||||||||||||||||||||||||||||||||    
T  52082889 tctcttgggttgggaaacattgtaaacaccttg 52082857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 48
Target Start/End: Complemental strand, 52095594 - 52095562
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    |||||||||||||||||||||||||||||||||    
T  52095594 tctcttgggttgggaaacattgtaaacaccttg 52095562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 48
Target Start/End: Complemental strand, 56178868 - 56178836
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    |||||||||||||||||||||||||||||||||    
T  56178868 tctcttgggttgggaaacattgtaaacaccttg 56178836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 16 - 47
Target Start/End: Complemental strand, 12739782 - 12739751
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacacctt 47  Q
    ||||||||||||||||||||||||||||||||    
T  12739782 tctcttgggttgggaaacattgtaaacacctt 12739751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 16 - 47
Target Start/End: Complemental strand, 12747988 - 12747957
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacacctt 47  Q
    ||||||||||||||||||||||||||||||||    
T  12747988 tctcttgggttgggaaacattgtaaacacctt 12747957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 51336985 - 51337032
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaacattgtaaacaccttg 48  Q
    ||||||||| || | ||||||||||||| |||||||||||||||||||    
T  51336985 tctttgtagtgaggttctcttgggttggaaaacattgtaaacaccttg 51337032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 51520553 - 51520503
Alignment:
Q  182 ttcttgtaactctttgtaacactttcatcatagtggattggagagctgctct 233  Q
    ||||||||||  |||||||||||||| ||||| |||||||||||||||||||    
T  51520553 ttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctct 51520503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 182 - 233
Target Start/End: Original strand, 56146700 - 56146750
Alignment:
Q  182 ttcttgtaactctttgtaacactttcatcatagtggattggagagctgctct 233  Q
    ||||||||||  |||||||||||||| ||||| |||||||||||||||||||    
T  56146700 ttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctct 56146750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 233
Target Start/End: Complemental strand, 3814119 - 3814070
Alignment:
Q  183 tcttgtaactctttgtaacactttcatcatagtggattggagagctgctct 233  Q
    |||||||||  ||||||||||||||| |||| |||||||||||||||||||    
T  3814119 tcttgtaaccttttgtaacactttca-catattggattggagagctgctct 3814070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 233
Target Start/End: Complemental strand, 5732760 - 5732711
Alignment:
Q  183 tcttgtaactctttgtaacactttcatcatagtggattggagagctgctct 233  Q
    |||||||||  |||||||||||||| ||||| |||||||||||||||||||    
T  5732760 tcttgtaaccttttgtaacactttc-tcatattggattggagagctgctct 5732711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 233
Target Start/End: Original strand, 8689498 - 8689536
Alignment:
Q  195 ttgtaacactttcatcatagtggattggagagctgctct 233  Q
    ||||||||||||||||||||||||| |||||||| ||||    
T  8689498 ttgtaacactttcatcatagtggataggagagctcctct 8689536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 233
Target Start/End: Original strand, 25862035 - 25862073
Alignment:
Q  195 ttgtaacactttcatcatagtggattggagagctgctct 233  Q
    |||||||||||||||||||||||||||||| || |||||    
T  25862035 ttgtaacactttcatcatagtggattggagggccgctct 25862073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 233
Target Start/End: Original strand, 45347807 - 45347856
Alignment:
Q  183 tcttgtaactctttgtaacactttcatcatagtggattggagagctgctct 233  Q
    |||||||||  |||||||||||||| ||||| |||||||||||||||||||    
T  45347807 tcttgtaaccttttgtaacactttc-tcatattggattggagagctgctct 45347856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 233
Target Start/End: Original strand, 45357286 - 45357335
Alignment:
Q  183 tcttgtaactctttgtaacactttcatcatagtggattggagagctgctct 233  Q
    |||||||||  |||||||||||||| ||||| |||||||||||||||||||    
T  45357286 tcttgtaaccttttgtaacactttc-tcatattggattggagagctgctct 45357335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 48
Target Start/End: Original strand, 4587881 - 4587926
Alignment:
Q  3 tttgtagagatgatctcttgggttgggaaacattgtaaacaccttg 48  Q
    ||||||| || | |||| ||||||||||||||||||||||||||||    
T  4587881 tttgtagtgaggttctcatgggttgggaaacattgtaaacaccttg 4587926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 48
Target Start/End: Complemental strand, 26175864 - 26175836
Alignment:
Q  20 ttgggttgggaaacattgtaaacaccttg 48  Q
    |||||||||||||||||||||||||||||    
T  26175864 ttgggttgggaaacattgtaaacaccttg 26175836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 44
Target Start/End: Original strand, 29254430 - 29254458
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacac 44  Q
    |||||||||||||||||||||||||||||    
T  29254430 tctcttgggttgggaaacattgtaaacac 29254458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 48
Target Start/End: Complemental strand, 30000037 - 30000005
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    ||||||||||| |||||||||||||||||||||    
T  30000037 tctcttgggtttggaaacattgtaaacaccttg 30000005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 233
Target Start/End: Original strand, 34495822 - 34495874
Alignment:
Q  182 ttcttgtaactc-tttgtaacactttcatcatagtggattggagagctgctct 233  Q
    |||||||||| | |||||| |||||||||| ||||||||||||| ||||||||    
T  34495822 ttcttgtaacccatttgtatcactttcatcttagtggattggagggctgctct 34495874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 48
Target Start/End: Complemental strand, 36463621 - 36463589
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    ||||||| |||||||||||||||||||||||||    
T  36463621 tctcttgagttgggaaacattgtaaacaccttg 36463589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 48
Target Start/End: Complemental strand, 47038641 - 47038609
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    ||||||||||||||||||||| |||||||||||    
T  47038641 tctcttgggttgggaaacattataaacaccttg 47038609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 44
Target Start/End: Complemental strand, 54200138 - 54200110
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacac 44  Q
    |||||||||||||||||||||||||||||    
T  54200138 tctcttgggttgggaaacattgtaaacac 54200110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 161; Significance: 8e-86; HSPs: 55)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 161; E-Value: 8e-86
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 7412619 - 7412387
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatcaaaagtttccttttgttttttct 100  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| | | ||||    
T  7412619 tctttgtagagaggatctcttgggttgggaaacattgtaaacaccttgggtagtgagatttcaccattgaaaggatcaaaagcttccttttatgtcttct 7412520  T
Q  101 cttaggattcattattgagagtgtaggtaacacaaatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaactctttgtaa 200  Q
    |||||| |||||||||||||| || || |||||||||||||||||||||| | ||| ||||||||||| ||  ||| || ||||||||||||||||||||    
T  7412519 cttagggttcattattgagagagtgggaaacacaaatgggtagaaattaggtcttgttcttgtgtaagcttgcaagttattttcttgtaactctttgtaa 7412420  T
Q  201 cactttcatcatagtggattggagagctgctct 233  Q
    |||||||||||||||||||||||||||||||||    
T  7412419 cactttcatcatagtggattggagagctgctct 7412387  T

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Target: chr8; HSP #2
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 5 - 233
Target Start/End: Complemental strand, 4456303 - 4456074
Alignment:
Q  5 tgtagagatgatctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatcaaaagtttccttttgttttttctctt- 103  Q
    ||||| || ||||||||||||||||||||||||||||||||||| |||||||||||||||||||  |||||||||||| |||||||||| | |||||||     
T  4456303 tgtagtgaggatctcttgggttgggaaacattgtaaacaccttgggtagtgagatttcaccattagaaggatcaaaagcttccttttgtgtcttctcttt 4456204  T
Q  104 aggattcattattgagagtgtaggtaacacaaatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaactctttgtaacac 203  Q
    ||| ||||| |||||||| || ||||||||||||||||||||||||  | ||| ||||||||||| ||   ||||| |||||||||||||||||||||||    
T  4456203 agggttcatcattgagagagtgggtaacacaaatgggtagaaattatgtcttgttcttgtgtaagcttgccagctattttcttgtaactctttgtaacac 4456104  T
Q  204 tttcatcatagtggattggagagctgctct 233  Q
    ||||||||||||||||||||||||||||||    
T  4456103 tttcatcatagtggattggagagctgctct 4456074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 5702298 - 5702534
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatc-aaaagtttccttttgt-ttttt 98  Q
    ||||||||| || ||||||||||||||||||| ||||||||||||||| |||||||||||||||||||| || |||| ||||| |||||||||| |||||    
T  5702298 tctttgtagtgaggatctcttgggttgggaaatattgtaaacaccttgggtagtgagatttcaccattggaatgatcaaaaagcttccttttgtgttttt 5702397  T
Q  99 ctcttaggattcattattgagagtgtaggtaacac-aaatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaactc-ttt 196  Q
    |||||||||||||||||||||||||| ||| || | ||||||||||||||||| | ||||||||||||||| || ||||||||||||||||||||| |||    
T  5702398 ctcttaggattcattattgagagtgtgggtgactcaaaatgggtagaaattaggttttgctcttgtgtaagcttataagctaatttcttgtaactctttt 5702497  T
Q  197 gtaacactttcatcatagtggattggagagctgctct 233  Q
    |||||||||||||||||| ||||||||| | ||||||    
T  5702498 gtaacactttcatcataggggattggagggatgctct 5702534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 22 - 233
Target Start/End: Complemental strand, 6127481 - 6127267
Alignment:
Q  22 gggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatc-aaaagtttccttttgttttttctcttaggattcattattgaga 120  Q
    ||||||||||||||||||||||  ||| |||||||||||||||||||| ||||||| ||||| || ||||||| ||||||||||||||||||||||||||    
T  6127481 gggttgggaaacattgtaaacattttgggtagtgagatttcaccattggaaggatcaaaaagctttcttttgtgttttctcttaggattcattattgaga 6127382  T
Q  121 gtgtaggtaacac-aaatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaactc-tttgtaacactttcatcatagtgga 218  Q
    |||| ||| |||| ||||||||||||||||| | ||| |||| |||||| || ||||||||||||||||||||| |||||||||||||||||||||||||    
T  6127381 gtgtgggtgacacaaaatgggtagaaattaggtcttgttcttttgtaagcttataagctaatttcttgtaactcttttgtaacactttcatcatagtgga 6127282  T
Q  219 ttggagagctgctct 233  Q
    |||||||||||||||    
T  6127281 ttggagagctgctct 6127267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 19175572 - 19175805
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatcaaaagtttccttttgttttttct 100  Q
    ||||||||| || |||||||||| |||||||||||||||||||||||| ||||||||||||||| |||| ||||||||||||||||||||||| | ||||    
T  19175572 tctttgtagtgaggatctcttggattgggaaacattgtaaacaccttgggtagtgagatttcactattggaaggatcaaaagtttccttttgtgtcttct 19175671  T
Q  101 cttaggattcattattgagagtgtaggtaacacaaatgggtagaaattagatattgctcttgtgtaagtttctaagcta-atttcttgtaactctttgta 199  Q
    |||||| ||||| |||||||| || || |||||||||| |||||| |||| | ||| ||||||||||| ||  | ||||  |||||||||||||||||||    
T  19175672 cttagggttcatcattgagagagtgggaaacacaaatgtgtagaagttaggtcttgttcttgtgtaagcttgcaggctatttttcttgtaactctttgta 19175771  T
Q  200 acactttcatcatagtggattggagagctgctct 233  Q
    ||||||||||||||||||||||||||| ||||||    
T  19175772 acactttcatcatagtggattggagagttgctct 19175805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 23799394 - 23799628
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatc-aaaagtttccttttgttttttc 99  Q
    |||||||||||| |||||||||||||||| |||||||||||||||||| |||| ||||||||||||||| ||||||| ||||| |||||||||| |||||    
T  23799394 tctttgtagagaggatctcttgggttggggaacattgtaaacaccttgagtagggagatttcaccattggaaggatcaaaaagcttccttttgtgttttc 23799493  T
Q  100 tcttaggattcattattgagagtgtaggtaacac-aaatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaactc-tttg 197  Q
     ||||||||||| ||||| ||  || ||| |||| ||||||||||||||||| | ||| ||||||||||| || ||||||||||||||||||||| ||||    
T  23799494 ccttaggattca-tattgtgacagtgggtgacacaaaatgggtagaaattaggtcttgttcttgtgtaagcttgtaagctaatttcttgtaactcttttg 23799592  T
Q  198 taacactttcatcatagtggattggagagctgctct 233  Q
    ||||||||||||||||||||||||||| ||||||||    
T  23799593 taacactttcatcatagtggattggagggctgctct 23799628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 22 - 233
Target Start/End: Original strand, 26403068 - 26403281
Alignment:
Q  22 gggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatc-aaaagtttccttttgttttttctcttaggattcattattgaga 120  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| ||||| |||||||||| |||||||||| |||||| ||||| ||    
T  26403068 gggttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaaagcttccttttgtgttttctcttatgattca-tattgtga 26403166  T
Q  121 gtgtaggtaacac-aaatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaactc-tttgtaacactttcatcatagtgga 218  Q
    | ||  || |||| ||||||||||||||||| | ||| ||||||| ||| || |||||||||||| | |||||| |||||||||||||||||||||||||    
T  26403167 gagtgagtgacacaaaatgggtagaaattaggtcttgttcttgtgcaagcttgtaagctaatttcctataactcttttgtaacactttcatcatagtgga 26403266  T
Q  219 ttggagagctgctct 233  Q
    |||||||||||||||    
T  26403267 ttggagagctgctct 26403281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 4696426 - 4696620
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatc-aaaagtttccttttgttttttc 99  Q
    ||||||||| || ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || |||| ||||| |||||||||| |||||    
T  4696426 tctttgtagtgaggatctcttgggttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaagatcaaaaagcttccttttgtgttttc 4696525  T
Q  100 tcttaggattcattattgagagtgtaggtaacac-aaatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaactcttt 196  Q
    |||||||||||   | ||||||||| ||| |||| ||||||||||||||||| | ||| ||||| ||||| || ||||||||||||||||||||||||    
T  4696526 tcttaggattc---aatgagagtgtgggtgacacaaaatgggtagaaattaggtcttgttcttgcgtaagcttataagctaatttcttgtaactcttt 4696620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 31071043 - 31071280
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaa--cattgtaaacaccttgcgtagtgagatttcaccattgaaaggatcaaaagtttccttttgtttttt 98  Q
    ||||||||| || |||||||||||||||||||  |||||||||||||||| |||||||||||||||||||| |||||||  ||| ||||| |||| | ||    
T  31071043 tctttgtagtgaggatctcttgggttgggaaaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatcttaagcttcctcttgtgtctt 31071142  T
Q  99 ctctt--aggattcattat-tgagagtgtaggtaacacaaatgggtagaaattagatattgctcttgtgtaagtttctaagctaattt-cttgtaactct 194  Q
    |||||  ||| |||||  | ||||||||  || |||||||||||||||||| |||   ||| ||||||||||| ||  |||||| ||| |||||||| ||    
T  31071143 ctcttttagggttcatattgtgagagtgg-ggaaacacaaatgggtagaaactaggacttgttcttgtgtaagcttgcaagctatttttcttgtaaccct 31071241  T
Q  195 ttgtaacactttcatcatagtggattggagagctgctct 233  Q
    |||||||||||||||||||||||||||||||||||||||    
T  31071242 ttgtaacactttcatcatagtggattggagagctgctct 31071280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 19752212 - 19752445
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatc-aaaagtttccttttgttttttc 99  Q
    ||||||||| || | |||||||||||| |||| ||||||||||||||| |||||||||||||| ||||| ||||||| ||||| |||| ||||| |||||    
T  19752212 tctttgtagtgaggttctcttgggttgtgaaatattgtaaacaccttgggtagtgagatttcatcattggaaggatcaaaaagcttcc-tttgtgttttc 19752310  T
Q  100 tcttaggattcattattgagagtgtagg---taacacaaatgggtagaaattagatattgctcttgtgtaagtttctaagcta-atttcttgtaactctt 195  Q
    |||||||||||   ||||||||||| ||   ||  | |||||||||||||||||   ||| ||||||||||| ||  ||||||  ||||||||||||| |    
T  19752311 tcttaggattc---attgagagtgtgggtgatatgaaaaatgggtagaaattaggacttgttcttgtgtaagcttgcaagctatttttcttgtaactcat 19752407  T
Q  196 tgtaacactttcatcatagtggattggagagctgctct 233  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  19752408 tgtaacactttcatcttagtggattggagagctgctct 19752445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 1261768 - 1262005
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaa--cattgtaaacaccttgcgtagtgagatttcaccattgaaaggatcaaaagtttccttttgtttttt 98  Q
    |||||||||||| | |||||||||||||||||  |||||||| ||||||| |||||||||||||||||||| ||||||| |||| ||||| | || | ||    
T  1261768 tctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttgggtagtgagatttcaccattggaaggatctaaagcttcctctagtgtctt 1261867  T
Q  99 ctctt--aggattcattat-tgagagtgtaggtaacacaaatgggtagaaattagatattgctcttgtgtaagtttctaagctaattt-cttgtaactct 194  Q
    |||||  ||| |||||  | ||||||||  || |||||||||||||||||  ||| | |||  |||||||||| ||  |||||| ||| |||||||| ||    
T  1261868 ctcttttagggttcatattgtgagagtgg-ggaaacacaaatgggtagaatctaggtcttgtacttgtgtaagcttgcaagctatttttcttgtaaccct 1261966  T
Q  195 ttgtaacactttcatcatagtggattggagagctgctct 233  Q
    |||||||||||||||||||||||||||||||||||||||    
T  1261967 ttgtaacactttcatcatagtggattggagagctgctct 1262005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 16 - 233
Target Start/End: Complemental strand, 3051384 - 3051166
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatc-aaaagtttccttttgttttttctcttaggattcatta 114  Q
    ||||||| |||||||||||||||||||| |||| |||||||||||||||||||| || |||| ||||| ||||||||||  |||||||||||||||   |    
T  3051384 tctcttgagttgggaaacattgtaaacatcttgggtagtgagatttcaccattggaaagatcaaaaagcttccttttgtgctttctcttaggattc---a 3051288  T
Q  115 ttgagagtgtaggtaac---acaaatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaactc-tttgtaacactttcatc 210  Q
    ||||||||||| || ||   | ||||||||||||||||  | ||| |||| ||| || |  || |||||||||||||||||| |||||| ||||||||||    
T  3051287 ttgagagtgtaagtgacatgaaaaatgggtagaaattaagttttgttctt-tgtgagctcttatgctaatttcttgtaactcatttgtatcactttcatc 3051189  T
Q  211 atagtggattggagagctgctct 233  Q
     ||||||||||||||| ||||||    
T  3051188 ttagtggattggagaggtgctct 3051166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 26288173 - 26287947
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaa--cattgtaaacaccttgcgtagtgagatttcaccattgaaaggatcaaaagtttccttttgtttttt 98  Q
    ||||||||||||  |||||||| |||||||||  |||||||||||||||| |||||||||||||||||||| ||||||| |||| ||||| |||| | ||    
T  26288173 tctttgtagagagaatctcttgagttgggaaaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatctaaagcttcctcttgtgtctt 26288074  T
Q  99 ctc--ttaggattcattattgagagtgtaggtaacacaaatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaactcttt 196  Q
    |||  ||||| |||| ||||| ||| || || |||||||||||||||||| |||   ||| ||||||||||| ||  |||||| |||        || ||    
T  26288073 ctcttttagggttca-tattgtgagagtggggaacacaaatgggtagaaactaggacttgttcttgtgtaagcttgcaagctatttt--------tc-tt 26287984  T
Q  197 gtaacactttcatcatagtggattggagagctgctct 233  Q
    |||||||||||||||||||||||||||||||||||||    
T  26287983 gtaacactttcatcatagtggattggagagctgctct 26287947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 26301430 - 26301204
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaa--cattgtaaacaccttgcgtagtgagatttcaccattgaaaggatcaaaagtttccttttgtttttt 98  Q
    ||||||||||||  |||||||| |||||||||  |||||||||||||||| |||||||||||||||||||| ||||||| |||| ||||| |||| | ||    
T  26301430 tctttgtagagagaatctcttgagttgggaaaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatctaaagcttcctcttgtgtctt 26301331  T
Q  99 ctc--ttaggattcattattgagagtgtaggtaacacaaatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaactcttt 196  Q
    |||  ||||| |||| ||||| ||| || || |||||||||||||||||| |||   ||| ||||||||||| ||  |||||| |||        || ||    
T  26301330 ctcttttagggttca-tattgtgagagtggggaacacaaatgggtagaaactaggacttgttcttgtgtaagcttgcaagctatttt--------tc-tt 26301241  T
Q  197 gtaacactttcatcatagtggattggagagctgctct 233  Q
    |||||||||||||||||||||||||||||||||||||    
T  26301240 gtaacactttcatcatagtggattggagagctgctct 26301204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 26313424 - 26313198
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaa--cattgtaaacaccttgcgtagtgagatttcaccattgaaaggatcaaaagtttccttttgtttttt 98  Q
    ||||||||||||  |||||||| |||||||||  |||||||||||||||| |||||||||||||||||||| ||||||| |||| ||||| |||| | ||    
T  26313424 tctttgtagagagaatctcttgagttgggaaaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatctaaagcttcctcttgtgtctt 26313325  T
Q  99 ctc--ttaggattcattattgagagtgtaggtaacacaaatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaactcttt 196  Q
    |||  ||||| |||| ||||| ||| || || |||||||||||||||||| |||   ||| ||||||||||| ||  |||||| |||        || ||    
T  26313324 ctcttttagggttca-tattgtgagagtggggaacacaaatgggtagaaactaggacttgttcttgtgtaagcttgcaagctatttt--------tc-tt 26313235  T
Q  197 gtaacactttcatcatagtggattggagagctgctct 233  Q
    |||||||||||||||||||||||||||||||||||||    
T  26313234 gtaacactttcatcatagtggattggagagctgctct 26313198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 3 - 221
Target Start/End: Original strand, 7492993 - 7493212
Alignment:
Q  3 tttgtagagatgatctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatc-aaaagtttccttttgttttttctc 101  Q
    ||||||| || | |||||||| |||||||||||||||||||||||| ||||||||||||||| |||  ||||||| ||||| ||||||| || |||| ||    
T  7492993 tttgtagtgaggttctcttggattgggaaacattgtaaacaccttgggtagtgagatttcacaattagaaggatcaaaaagcttcctttagtgttttttc 7493092  T
Q  102 ttaggattcattattgagagtgtaggtaac---acaaatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaac-tctttg 197  Q
    |||||||   ||||||||||||| ||| ||   | |||  |||||||||||| | ||| || ||||| || || || | ||||||||| |||| ||||||    
T  7493093 ttaggat---ttattgagagtgtgggtgacttgaaaaacaggtagaaattaggttttgttc-tgtgtgagcttttatgttaatttcttataacttctttg 7493188  T
Q  198 taacactttcatcatagtggattg 221  Q
    || |||||||||| ||||||||||    
T  7493189 tatcactttcatcttagtggattg 7493212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 16 - 111
Target Start/End: Complemental strand, 28307826 - 28307730
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggat-caaaagtttccttttgttttttctcttaggattca 111  Q
    |||||| |||||||||||||||| ||||||||| ||||||||||||||| |||| ||||||  ||||| || ||||||| |||||| ||||||||||    
T  28307826 tctcttaggttgggaaacattgttaacaccttgggtagtgagatttcacaattggaaggataaaaaagctttcttttgtgttttcttttaggattca 28307730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 81
Target Start/End: Original strand, 9054253 - 9054318
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatcaaaa 81  Q
    ||||||||||||| ||||||| ||| ||||||| |||||||||||||||||||| |||||||||||    
T  9054253 tctcttgggttggaaaacattataatcaccttgggtagtgagatttcaccattggaaggatcaaaa 9054318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 181 - 233
Target Start/End: Original strand, 4760074 - 4760126
Alignment:
Q  181 tttcttgtaactctttgtaacactttcatcatagtggattggagagctgctct 233  Q
    ||||||||||| ||||||||||||||||||||| |||||||||||||||||||    
T  4760074 tttcttgtaaccctttgtaacactttcatcatattggattggagagctgctct 4760126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 134 - 233
Target Start/End: Original strand, 9054789 - 9054888
Alignment:
Q  134 aaatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaact-ctttgtaacactttcatcatagtggattggagagctgctc 232  Q
    ||||||||||||||||||| ||| |||| |||  | || |||||||||||||||||||  ||||||| |||||||||| ||||||||| |||||||||||    
T  9054789 aaatgggtagaaattagattttgttctt-tgtgcgcttttaagctaatttcttgtaaccactttgtatcactttcatcttagtggattagagagctgctc 9054887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 181 - 233
Target Start/End: Complemental strand, 36979475 - 36979423
Alignment:
Q  181 tttcttgtaactctttgtaacactttcatcatagtggattggagagctgctct 233  Q
    ||||||||||| ||||||||||||||||||||| |||||||||||||||||||    
T  36979475 tttcttgtaaccctttgtaacactttcatcatattggattggagagctgctct 36979423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 16 - 233
Target Start/End: Original strand, 5990394 - 5990611
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccatt-gaaaggatcaaaagtttccttttgttttttctcttaggattcatta 114  Q
    ||||||||||||||||||||||||| || ||||  | |||||||||||||||| ||||||   ||||| || |||| || |||||||||||||||||||     
T  5990394 tctcttgggttgggaaacattgtaatcatcttggtttgtgagatttcaccattcgaaaggtcaaaaagctttctttagtgttttctcttaggattcatt- 5990492  T
Q  115 ttgagagtgtaggtaac---acaaatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaac-tctttgtaacactttcatc 210  Q
      || ||||| ||| ||   | ||||||||  |||| || |  || |||| ||| || || ||||||||||||||||||| |||||||| ||||||||||    
T  5990493 --gaaagtgtgggtgacttgaaaaatgggtgaaaatgaggtcgtgttctt-tgtgagcttttaagctaatttcttgtaacatctttgtatcactttcatc 5990589  T
Q  211 atagtggattggagagctgctct 233  Q
     ||||  |||||||||| |||||    
T  5990590 ttagt-aattggagagccgctct 5990611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 181 - 233
Target Start/End: Original strand, 10689142 - 10689194
Alignment:
Q  181 tttcttgtaactctttgtaacactttcatcatagtggattggagagctgctct 233  Q
    ||||||||||| || |||||||||||||||||| |||||||||||||||||||    
T  10689142 tttcttgtaaccctctgtaacactttcatcatattggattggagagctgctct 10689194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 181 - 233
Target Start/End: Complemental strand, 30655744 - 30655692
Alignment:
Q  181 tttcttgtaactctttgtaacactttcatcatagtggattggagagctgctct 233  Q
    ||||||||||| ||||||||||||||||||||| | |||||||||||||||||    
T  30655744 tttcttgtaaccctttgtaacactttcatcatattagattggagagctgctct 30655692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 181 - 233
Target Start/End: Original strand, 33037806 - 33037857
Alignment:
Q  181 tttcttgtaactctttgtaacactttcatcatagtggattggagagctgctct 233  Q
    ||||||||||| ||||||||||||||| ||||| |||||||||||||||||||    
T  33037806 tttcttgtaaccctttgtaacactttc-tcatattggattggagagctgctct 33037857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 15 - 48
Target Start/End: Complemental strand, 4743436 - 4743403
Alignment:
Q  15 atctcttgggttgggaaacattgtaaacaccttg 48  Q
    ||||||||||||||||||||||||||||||||||    
T  4743436 atctcttgggttgggaaacattgtaaacaccttg 4743403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 181 - 233
Target Start/End: Original strand, 18853166 - 18853219
Alignment:
Q  181 tttcttgtaactcttt-gtaacactttcatcatagtggattggagagctgctct 233  Q
    ||||||||||| |||| ||||||||||||| ||| |||||||||||||||||||    
T  18853166 tttcttgtaacccttttgtaacactttcattatattggattggagagctgctct 18853219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 181 - 233
Target Start/End: Original strand, 18870560 - 18870613
Alignment:
Q  181 tttcttgtaactcttt-gtaacactttcatcatagtggattggagagctgctct 233  Q
    ||||||||||| |||| ||||||||||||| ||| |||||||||||||||||||    
T  18870560 tttcttgtaacccttttgtaacactttcattatattggattggagagctgctct 18870613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 48
Target Start/End: Complemental strand, 3303902 - 3303870
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    |||||||||||||||||||||||||||||||||    
T  3303902 tctcttgggttgggaaacattgtaaacaccttg 3303870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 48
Target Start/End: Original strand, 4731594 - 4731626
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    |||||||||||||||||||||||||||||||||    
T  4731594 tctcttgggttgggaaacattgtaaacaccttg 4731626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 48
Target Start/End: Original strand, 4733745 - 4733777
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    |||||||||||||||||||||||||||||||||    
T  4733745 tctcttgggttgggaaacattgtaaacaccttg 4733777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 233
Target Start/End: Complemental strand, 6311394 - 6311343
Alignment:
Q  181 tttcttgtaactctttgtaacactttcatcatagtggattggagagctgctct 233  Q
    |||||||||||  |||||||||||||| ||||| |||||||||||||||||||    
T  6311394 tttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctct 6311343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 48
Target Start/End: Original strand, 6598908 - 6598940
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    |||||||||||||||||||||||||||||||||    
T  6598908 tctcttgggttgggaaacattgtaaacaccttg 6598940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 48
Target Start/End: Original strand, 6674361 - 6674393
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    |||||||||||||||||||||||||||||||||    
T  6674361 tctcttgggttgggaaacattgtaaacaccttg 6674393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 233
Target Start/End: Complemental strand, 6813789 - 6813729
Alignment:
Q  174 aagctaatttcttgtaactc-tttgtaacactttcatcatagtggattggagagctgctct 233  Q
    |||||||||||||||||| | |||||  |||||||||| || |||||||||||||||||||    
T  6813789 aagctaatttcttgtaacccctttgtgtcactttcatcttattggattggagagctgctct 6813729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 48
Target Start/End: Complemental strand, 12702870 - 12702838
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    |||||||||||||||||||||||||||||||||    
T  12702870 tctcttgggttgggaaacattgtaaacaccttg 12702838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 48
Target Start/End: Original strand, 15212722 - 15212754
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    |||||||||||||||||||||||||||||||||    
T  15212722 tctcttgggttgggaaacattgtaaacaccttg 15212754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 48
Target Start/End: Original strand, 17982589 - 17982621
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    |||||||||||||||||||||||||||||||||    
T  17982589 tctcttgggttgggaaacattgtaaacaccttg 17982621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 48
Target Start/End: Complemental strand, 18106310 - 18106278
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    |||||||||||||||||||||||||||||||||    
T  18106310 tctcttgggttgggaaacattgtaaacaccttg 18106278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 48
Target Start/End: Original strand, 31218193 - 31218225
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    |||||||||||||||||||||||||||||||||    
T  31218193 tctcttgggttgggaaacattgtaaacaccttg 31218225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 48
Target Start/End: Original strand, 33352086 - 33352118
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    |||||||||||||||||||||||||||||||||    
T  33352086 tctcttgggttgggaaacattgtaaacaccttg 33352118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 48
Target Start/End: Original strand, 43036359 - 43036391
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    |||||||||||||||||||||||||||||||||    
T  43036359 tctcttgggttgggaaacattgtaaacaccttg 43036391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 48
Target Start/End: Original strand, 44303790 - 44303822
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    |||||||||||||||||||||||||||||||||    
T  44303790 tctcttgggttgggaaacattgtaaacaccttg 44303822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 182 - 233
Target Start/End: Original strand, 7289915 - 7289965
Alignment:
Q  182 ttcttgtaactctttgtaacactttcatcatagtggattggagagctgctct 233  Q
    ||||||||||  |||||||||||||| ||||| |||||||||||||||||||    
T  7289915 ttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctct 7289965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 233
Target Start/End: Original strand, 25328268 - 25328317
Alignment:
Q  183 tcttgtaactctttgtaacactttcatcatagtggattggagagctgctct 233  Q
    |||||||||  |||||||||||||| ||||| |||||||||||||||||||    
T  25328268 tcttgtaaccttttgtaacactttc-tcatattggattggagagctgctct 25328317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 233
Target Start/End: Original strand, 10684243 - 10684303
Alignment:
Q  173 taagctaatttcttgtaactcttt-gtaacactttcatcatagtggattggagagctgctct 233  Q
    |||||||  ||||||||||||||| ||||||| |||| |||| |||||||||||||||||||    
T  10684243 taagctagattcttgtaactcttttgtaacacattca-catattggattggagagctgctct 10684303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 48
Target Start/End: Complemental strand, 1746450 - 1746418
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    |||||| ||||||||||||||||||||||||||    
T  1746450 tctctttggttgggaaacattgtaaacaccttg 1746418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 48
Target Start/End: Original strand, 4162436 - 4162468
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    ||||||||||||| |||||||||||||||||||    
T  4162436 tctcttgggttggaaaacattgtaaacaccttg 4162468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 44
Target Start/End: Original strand, 10015084 - 10015112
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacac 44  Q
    |||||||||||||||||||||||||||||    
T  10015084 tctcttgggttgggaaacattgtaaacac 10015112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 48
Target Start/End: Complemental strand, 19945592 - 19945560
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    |||||||||| ||||||||||||||||||||||    
T  19945592 tctcttgggtcgggaaacattgtaaacaccttg 19945560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 44
Target Start/End: Original strand, 30143278 - 30143306
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacac 44  Q
    |||||||||||||||||||||||||||||    
T  30143278 tctcttgggttgggaaacattgtaaacac 30143306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 35745488 - 35745437
Alignment:
Q  182 ttcttgtaactcttt-gtaacactttcatcatagtggattggagagctgctct 233  Q
    ||||||||||||||| ||||||| |||| |||| |||||||||||||||||||    
T  35745488 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctct 35745437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 48
Target Start/End: Original strand, 40321016 - 40321048
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    ||||||| |||||||||||||||||||||||||    
T  40321016 tctcttgagttgggaaacattgtaaacaccttg 40321048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 48
Target Start/End: Complemental strand, 41365075 - 41365047
Alignment:
Q  20 ttgggttgggaaacattgtaaacaccttg 48  Q
    |||||||||||||||||||||||||||||    
T  41365075 ttgggttgggaaacattgtaaacaccttg 41365047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 48
Target Start/End: Original strand, 42498130 - 42498162
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    |||||||||||||||||| ||||||||||||||    
T  42498130 tctcttgggttgggaaacgttgtaaacaccttg 42498162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 153; Significance: 5e-81; HSPs: 53)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 3281986 - 3281754
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatcaaaagtttccttttgttttttct 100  Q
    ||||||||| || ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| |||||||||| | ||||    
T  3281986 tctttgtagtgaggatctcttgggttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaagcttccttttgtgtcttct 3281887  T
Q  101 cttaggattcattattgagagtgtaggtaacacaaatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaactctttgtaa 200  Q
    |||||| ||||| |||||||| || || |||||||||||||||||||||| | ||| ||||||||||| ||  |||||| ||||||||||||||||||||    
T  3281886 cttagggttcatcattgagagagtgggaaacacaaatgggtagaaattaggtcttgttcttgtgtaagcttgcaagctattttcttgtaactctttgtaa 3281787  T
Q  201 cactttcatcatagtggattggagagctgctct 233  Q
    |||||||||||| ||||||||||||||||||||    
T  3281786 cactttcatcatcgtggattggagagctgctct 3281754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 29652092 - 29651857
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatc-aaaagtttccttttgttttttc 99  Q
    ||||||||| || ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| |||||||||||||||| |||||    
T  29652092 tctttgtagtgaggatcttttgggttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaaagtttccttttgtgttttc 29651993  T
Q  100 tcttaggattcattattgagagtgtaggtaacac-aaatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaactc-tttg 197  Q
    ||||||||||||||||||||||||| ||| |||| ||||||||||||||||| | ||| ||||||||||| || |||| ||||||||||||| || ||||    
T  29651992 tcttaggattcattattgagagtgtgggtgacacaaaatgggtagaaattaggtcttgttcttgtgtaagcttataagttaatttcttgtaattcttttg 29651893  T
Q  198 taacactttcatcatagtggattggagagctgctct 233  Q
    ||||||||||||||||||||||||||| ||||||||    
T  29651892 taacactttcatcatagtggattggagtgctgctct 29651857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 13604440 - 13604674
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatcaaaagtttccttttgttttttct 100  Q
    ||||||||| || ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| |||||||||| | ||||    
T  13604440 tctttgtagtgaggatctcttgggttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaagcttccttttgtgtcttct 13604539  T
Q  101 c-ttaggattcattattgagagtgtaggtaacacaaatgggtagaaattagatattgctcttgtgtaagtttctaagcta-atttcttgtaactctttgt 198  Q
    | ||||| |||||||||||||| || || |||||||||||||||||||||| | ||| ||||||||||||||  ||||||  ||||||||||||||||||    
T  13604540 ctttagggttcattattgagagagtgggaaacacaaatgggtagaaattaggtcttgttcttgtgtaagtttgcaagctatttttcttgtaactctttgt 13604639  T
Q  199 aacactttcatcatagtggattggagagctgctct 233  Q
    |||| ||||||||||||||||||||||||||||||    
T  13604640 aacattttcatcatagtggattggagagctgctct 13604674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 14 - 233
Target Start/End: Original strand, 16124345 - 16124567
Alignment:
Q  14 gatctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatc-aaaagtttccttttgttttttctcttaggattcat 112  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| ||||| |||||||||| ||||||||||||||||||    
T  16124345 gatctcttgggttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaaagcttccttttgtgttttctcttaggattcat 16124444  T
Q  113 tattgagagtgtaggtaacac-aaatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaactc-tttgtaacactttcatc 210  Q
    |||||| ||||| |||||||| ||||||||||||||||| | ||| |||| |||||| || ||||||||||||||||||||| |||||||||||||||||    
T  16124445 tattgaaagtgtgggtaacacaaaatgggtagaaattaggtcttgttcttatgtaagcttataagctaatttcttgtaactcttttgtaacactttcatc 16124544  T
Q  211 atagtggattggagagctgctct 233  Q
    |||||||||||||| ||||||||    
T  16124545 atagtggattggagggctgctct 16124567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 26644716 - 26644948
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatcaaaagtttccttttgttttttct 100  Q
    ||||||||| || ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| |||||||||| | ||||    
T  26644716 tctttgtagtgaagatcttttgggttgggaaacattgtaaacaccttgagtagtgagatttcaccattggaaggatcaaaagcttccttttgtgtcttct 26644815  T
Q  101 cttaggattcattattgagagtgtaggtaacacaaatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaactctttgtaa 200  Q
    |||||| ||||| |||||||| ||  | |||||||||||||||||||||| | ||| ||||||||||| ||  |||||| ||||||||||||||||||||    
T  26644816 cttagggttcatcattgagagagtgagaaacacaaatgggtagaaattaggtcttgttcttgtgtaagcttgcaagctattttcttgtaactctttgtaa 26644915  T
Q  201 cactttcatcatagtggattggagagctgctct 233  Q
    ||||||||||||| |||||||||||||||||||    
T  26644916 cactttcatcataatggattggagagctgctct 26644948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 21536388 - 21536620
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatcaaaagtttccttttgttttttct 100  Q
    ||||||||| || |||||||| |||||| ||||||||||||||||||| ||||| |||||||||||||| ||||||| |||| |||||||||| | ||||    
T  21536388 tctttgtagtgaggatctcttaggttggaaaacattgtaaacaccttgggtagtaagatttcaccattggaaggatcgaaagcttccttttgtgtcttct 21536487  T
Q  101 cttaggattcattattgagagtgtaggtaacacaaatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaactctttgtaa 200  Q
    |||||| ||||| |||||||| || ||||||||||| ||||||||||||  ||||| ||||||||||| ||  |||||| ||||||||||||||||||||    
T  21536488 cttagggttcatcattgagagagtgggtaacacaaacgggtagaaattaagtattgttcttgtgtaagcttgcaagctattttcttgtaactctttgtaa 21536587  T
Q  201 cactttcatcatagtggattggagagctgctct 233  Q
    ||||||||| |||||||||||||||||||||||    
T  21536588 cactttcattatagtggattggagagctgctct 21536620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 13598679 - 13598444
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatc-aaaagtttccttttgttttttc 99  Q
    ||||||||| || ||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| ||||||| ||||| |||||||||| |||||    
T  13598679 tctttgtagtgaggatctcttgggttggcaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaaagcttccttttgtgttttc 13598580  T
Q  100 tcttaggattcattattgagagtgtaggtaacac-aaatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaactc-tttg 197  Q
    ||||||||||||| ||||||||||| ||| |||| ||||| ||||||||||  | ||| ||||||||||| || ||||||||||||||||| ||| ||||    
T  13598579 tcttaggattcatcattgagagtgtgggtgacacaaaatgagtagaaattaagtcttgttcttgtgtaagcttataagctaatttcttgtatctcttttg 13598480  T
Q  198 taacactttcatcatagtggattggagagctgctct 233  Q
    |||||||||||||||||||||||| || ||||||||    
T  13598479 taacactttcatcatagtggattgaagggctgctct 13598444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 22 - 233
Target Start/End: Complemental strand, 19073186 - 19072974
Alignment:
Q  22 gggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatc-aaaagtttccttttgttttttctcttaggattcattattgaga 120  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||| ||||||| ||||| |||||||||| |||||||||||| |||||  ||||||    
T  19073186 gggttgggaaacattgtaaacaccttggatagtgagatttcaccattggaaggatcaaaaagcttccttttgtgttttctcttagggttcat--ttgaga 19073089  T
Q  121 gtgtaggtaacac-aaatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaactc-tttgtaacactttcatcatagtgga 218  Q
    ||||  || |||| ||||||||||||||||| ||||| |||| |||||| || ||||||||||||||||||||| ||||||||||||||||| |||||||    
T  19073088 gtgtgagtgacacaaaatgggtagaaattaggtattgttcttttgtaagcttataagctaatttcttgtaactcttttgtaacactttcatcttagtgga 19072989  T
Q  219 ttggagagctgctct 233  Q
    |||||||||||||||    
T  19072988 ttggagagctgctct 19072974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 22 - 233
Target Start/End: Complemental strand, 19121076 - 19120864
Alignment:
Q  22 gggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatc-aaaagtttccttttgttttttctcttaggattcattattgaga 120  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||| ||||||| ||||| |||||||||| |||||||||||| |||||  ||||||    
T  19121076 gggttgggaaacattgtaaacaccttggatagtgagatttcaccattggaaggatcaaaaagcttccttttgtgttttctcttagggttcat--ttgaga 19120979  T
Q  121 gtgtaggtaacac-aaatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaactc-tttgtaacactttcatcatagtgga 218  Q
    ||||  || |||| ||||||||||||||||| ||||| |||| |||||| || ||||||||||||||||||||| ||||||||||||||||| |||||||    
T  19120978 gtgtgagtgacacaaaatgggtagaaattaggtattgttcttttgtaagcttataagctaatttcttgtaactcttttgtaacactttcatcttagtgga 19120879  T
Q  219 ttggagagctgctct 233  Q
    |||||||||||||||    
T  19120878 ttggagagctgctct 19120864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 37070046 - 37069816
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatcaaaagtttccttttgttttttct 100  Q
    ||||||||| || |||||||||||||||||||||||||||||||||||  || |||||||||||||||| |||||||||||| |||||||||| | ||||    
T  37070046 tctttgtagtgaggatctcttgggttgggaaacattgtaaacaccttggataatgagatttcaccattggaaggatcaaaagcttccttttgtgtcttct 37069947  T
Q  101 c-ttaggattcattattgagagtgtaggtaacacaaatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaactctttgta 199  Q
    | ||| | |||||||||||| | || ||||||||||||||||||||||||| | ||| ||||||||||| ||  || |||   | |||||||||||||||    
T  37069946 ctttatggttcattattgagtgagtgggtaacacaaatgggtagaaattaggtcttgttcttgtgtaagcttgcaaacta---ttttgtaactctttgta 37069850  T
Q  200 acactttcatcatagtggattggagagctgctct 233  Q
    |||||||||||||||||||| |||||| ||||||    
T  37069849 acactttcatcatagtggatcggagagatgctct 37069816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 22 - 233
Target Start/End: Original strand, 47703774 - 47703987
Alignment:
Q  22 gggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggat-caaaagtttccttttgttttttctcttaggattcattattgaga 120  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||| || |||  ||||  |||||||||| ||||||||||||||||| ||||| ||    
T  47703774 gggttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaatgataaaaaaacttccttttgtgttttctcttaggattca-tattgtga 47703872  T
Q  121 gtgtaggtaacac-aaatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaactc-tttgtaacactttcatcatagtgga 218  Q
    | || ||| |||| ||||||||||||||||| | ||| ||||||||||| || |||||||||||||||||| || |||||||||||||||||||||||||    
T  47703873 gagtgggtgacacaaaatgggtagaaattaggtcttgttcttgtgtaagcttgtaagctaatttcttgtaattcttttgtaacactttcatcatagtgga 47703972  T
Q  219 ttggagagctgctct 233  Q
    |||||||||||||||    
T  47703973 ttggagagctgctct 47703987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 22 - 210
Target Start/End: Original strand, 40816655 - 40816842
Alignment:
Q  22 gggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatc-aaaagtttccttttgttttttctcttaggattcattattgaga 120  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| ||||| |||||||||| ||||||||||||||||   |||||||    
T  40816655 gggttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaaagcttccttttgtgttttctcttaggattc---attgaga 40816751  T
Q  121 gtgtaggtaacacaaatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaactc-tttgtaacactttcatc 210  Q
    |||| ||| ||||||||| ||||||||||| | ||| |||| |||||| || ||||||||||||||||||||| |||||||||||||||||    
T  40816752 gtgtgggtgacacaaatgagtagaaattaggtcttgttcttttgtaagcttataagctaatttcttgtaactcttttgtaacactttcatc 40816842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 47098643 - 47098875
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatc-aaaagtttccttttgttttttc 99  Q
    ||||||||| || | ||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| ||||| |||||||||| ||||     
T  47098643 tctttgtagcgaggttctcttgggttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaaagcttccttttgtgttttt 47098742  T
Q  100 tcttaggattcattattgagagtgtaggtaa--cacaaatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaactctttg 197  Q
    ||||||| |||   ||||||||||| ||| |     |||||||||||||||||   ||| |||| |||||| || ||||||||||||||||||||| |||    
T  47098743 tcttaggtttc---attgagagtgtgggtgatgtgaaaatgggtagaaattaggacttgttcttttgtaagcttataagctaatttcttgtaactcattg 47098839  T
Q  198 taacactttcatcatagtggattggagagctgctct 233  Q
    ||||||||||||| ||||||||||||| ||||||||    
T  47098840 taacactttcatcttagtggattggagggctgctct 47098875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 9476541 - 9476307
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatc-aaaagtttccttttgttttttc 99  Q
    ||||||||| || | |||||| ||||||||||||||||||||| |||| |||||||||||||||||||  ||||||| ||||| |||||||||| |||||    
T  9476541 tctttgtagtgaggttctctttggttgggaaacattgtaaacatcttgggtagtgagatttcaccatttgaaggatcaaaaagcttccttttgtgttttc 9476442  T
Q  100 tcttaggattcattattgagagtgtaggtaacac-aaatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaactc-tttg 197  Q
    ||||| ||||||  |||| ||| ||  || |||| |||||| |||||||||| | ||| ||||||||||| || |||||||||||||| |||||| ||||    
T  9476441 tcttaagattca-cattgtgagagtgagtgacacaaaatggatagaaattaggtcttgttcttgtgtaagcttgtaagctaatttcttataactcttttg 9476343  T
Q  198 taacactttcatcatagtggattggagagctgctct 233  Q
    ||| ||||||||||||||||||||||||||||||||    
T  9476342 taatactttcatcatagtggattggagagctgctct 9476307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 19358658 - 19358894
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaa-cattgtaaacaccttgcgtagtgagatttcaccattgaaaggatcaaaagtttccttttgttttttc 99  Q
    ||||||||| || ||||| ||||||||||||| |||||||||||||||| |||||||||||||||||||| ||||||| |||| ||||| |||| | |||    
T  19358658 tctttgtagtgaggatcttttgggttgggaaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatctaaagcttcctcttgtgtcttc 19358757  T
Q  100 tctt--aggattcattattgagagtgtaggtaa-cacaaatgggtagaaattagatattgctcttgtgtaagtttctaagctaattt-cttgtaactctt 195  Q
    ||||  ||| ||||| |||||||| || || || |||||||||||||||  ||| | ||| ||||||||||| ||  |||||| ||| |||||||| |||    
T  19358758 tcttttagggttcat-attgagagagtggggaaacacaaatgggtagaatctaggtcttgttcttgtgtaagcttgcaagctatttttcttgtaaccctt 19358856  T
Q  196 tgtaacactttcatcatagtggattggagagctgctct 233  Q
    ||||||||||||||||||||||||||||||||||||||    
T  19358857 tgtaacactttcatcatagtggattggagagctgctct 19358894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 19361247 - 19361483
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaa-cattgtaaacaccttgcgtagtgagatttcaccattgaaaggatcaaaagtttccttttgttttttc 99  Q
    ||||||||| || ||||||||||||||||||| |||||||||||||||| |||||||||||||||||||| ||||||| |||| ||||| |||| | |||    
T  19361247 tctttgtagtgaggatctcttgggttgggaaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatctaaagcttcctcttgtgtcttc 19361346  T
Q  100 tctt--aggattcattattgagagtgtaggtaa-cacaaatgggtagaaattagatattgctcttgtgtaagtttctaagctaattt-cttgtaactctt 195  Q
    ||||  ||| ||||| |||||||| || || || |||||||||||||||  ||| | ||| ||||||||||| ||  || ||| ||| |||||||| |||    
T  19361347 tcttttagggttcat-attgagagagtggggaaacacaaatgggtagaatctaggtcttgttcttgtgtaagcttgcaaactatttttcttgtaaccctt 19361445  T
Q  196 tgtaacactttcatcatagtggattggagagctgctct 233  Q
    ||||||||||||||||||||||||||||||||||||||    
T  19361446 tgtaacactttcatcatagtggattggagagctgctct 19361483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 20 - 233
Target Start/End: Complemental strand, 32889698 - 32889485
Alignment:
Q  20 ttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatcaaaagtttccttttgttttttctcttaggattcattattgag 119  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||| |||| ||||||| || ||||||| ||||||||||||||||   ||||||    
T  32889698 ttgggttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggttcaaaagctt-cttttgtgttttctcttaggattc---attgag 32889603  T
Q  120 agtgtagg---taacacaaatgggtagaaattagatattgctcttgtgtaagtttctaagcta-atttcttgtaactctttgtaacactttcatcatagt 215  Q
    ||||| ||   ||  | |||||||||||||||||   ||| ||||||||||| ||  ||||||  ||||||||||||| |||||||||||||||| ||||    
T  32889602 agtgtgggtgatatgaaaaatgggtagaaattaggacttgttcttgtgtaagcttgcaagctatttttcttgtaactcattgtaacactttcatcttagt 32889503  T
Q  216 ggattggagagctgctct 233  Q
    ||||||||||||||||||    
T  32889502 ggattggagagctgctct 32889485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 30 - 233
Target Start/End: Original strand, 19379917 - 19380123
Alignment:
Q  30 aaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatcaaaagtttccttttgttttttctctt--aggattcattattgagagtgtagg 127  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||||| |||| ||||| |||| | |||||||  ||| ||||| |||||||| || ||    
T  19379917 aaacattgtaaacaccttgggtagtgagatttcaccattggaaggatctaaagcttcctcttgtgtcttctcttttagggttcat-attgagagagtggg 19380015  T
Q  128 taa-cacaaatgggtagaaattagatattgctcttgtgtaagtttctaagctaattt-cttgtaactctttgtaacactttcatcatagtggattggaga 225  Q
     || |||||||||||||||  ||| | ||| ||||||||||| ||  || ||| ||| |||||||| |||||||||||||||||||||||||||||||||    
T  19380016 gaaacacaaatgggtagaatctaggtcttgttcttgtgtaagcttgcaaactatttttcttgtaaccctttgtaacactttcatcatagtggattggaga 19380115  T
Q  226 gctgctct 233  Q
    ||||||||    
T  19380116 gctgctct 19380123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 24202583 - 24202820
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaa--cattgtaaacaccttgcgtagtgagatttcaccattgaaaggatcaaaagtttccttttgtttttt 98  Q
    ||||||||||||   |||||||||||||||||  |||||||| ||||||| |||||||||| ||||||||| ||||||| |||| ||||| | || | ||    
T  24202583 tctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgagatctcaccattggaaggatctaaagcttcctctagtgtctt 24202682  T
Q  99 ctctt--aggattcattat-tgagagtgtaggtaacacaaatgggtagaaattagatattgctcttgtgtaagtttctaagctaattt-cttgtaactct 194  Q
    |||||  ||| |||||  | ||||||||  || |||||||||||||||||  ||| | ||| ||||||||||| ||  |||||| ||| |||||||| ||    
T  24202683 ctcttttagggttcatattgtgagagtgg-ggaaacacaaatgggtagaatctaggtcttgttcttgtgtaagcttgcaagctatttttcttgtaaccct 24202781  T
Q  195 ttgtaacactttcatcatagtggattggagagctgctct 233  Q
    |||||||||||||||||||||||||||||||||||||||    
T  24202782 ttgtaacactttcatcatagtggattggagagctgctct 24202820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 47102657 - 47102892
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatc-aaaagtttccttttgttttttc 99  Q
    ||||||||| || | ||||||||||||||||||||||||||||||||| |||||||||||||| ||||| ||||||| ||||| || ||||||| ||||     
T  47102657 tctttgtagtgaggttctcttgggttgggaaacattgtaaacaccttgggtagtgagatttcatcattggaaggatcaaaaagctttcttttgtgttttt 47102756  T
Q  100 tcttaggattcattattgagagtgt---aggtaacacaaatggg--tagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaactct 194  Q
    |||||||||||   |||||||||||    | ||  | |||||||  ||||||||||   ||| |||| |||| | || |||| ||||||||||||||||     
T  47102757 tcttaggattc---attgagagtgtgagtgatatgaaaaatgggtatagaaattaggacttgttcttttgtatgcttataagttaatttcttgtaactca 47102853  T
Q  195 ttgtaacactttcatcatagtggattggagagctgctct 233  Q
    |||||||| ||||||| ||||||||||||  ||||||||    
T  47102854 ttgtaacattttcatcttagtggattggatggctgctct 47102892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 22819710 - 22819475
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatc-aaaagtttccttt--tgttttt 97  Q
    ||||||||| || | ||||||||||||||||||||||||||||||||| ||||| | |||||||||||| ||||||| ||||| |||||||  |||||||    
T  22819710 tctttgtagtgaggttctcttgggttgggaaacattgtaaacaccttgggtagttacatttcaccattggaaggatcaaaaagcttccttttgtgttttt 22819611  T
Q  98 tctcttaggattcattattgagagtgtaggtaac---acaaatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaactc- 193  Q
    |||||||||||||   ||||||||||| ||| ||   | |||||| |||||||||  | ||  |||| ||| || |   ||||||||||||||||||||     
T  22819610 tctcttaggattc---attgagagtgtgggtgacttgaaaaatggttagaaattatgtcttattctt-tgtgagctaaaaagctaatttcttgtaactca 22819515  T
Q  194 tttgtaacactttcatcatagtggattggagagctgctct 233  Q
    |||||| |||||||||| | ||||||||||| ||| ||||    
T  22819514 tttgtatcactttcatcttggtggattggagggctactct 22819475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 19366122 - 19366293
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaacat--tgtaaacaccttgcgtagtgagatttcaccattgaaaggatcaaaagtttccttttgtttttt 98  Q
    ||||||||| || ||||||||||||||||||| ||  ||||||||||||| |||||||||||||||||||| ||||||| |||| ||||| |||| | ||    
T  19366122 tctttgtagtgaggatctcttgggttgggaaaaatattgtaaacaccttgggtagtgagatttcaccattggaaggatctaaagcttcctcttgtgtctt 19366221  T
Q  99 ctc--ttaggattcattattgagagtgt-aggtaacacaaatgggtagaaattagatattgctcttgtgtaag 168  Q
    |||  ||||| |||| ||||||||| ||  || |||||||||||||||||  ||| | ||| |||||||||||    
T  19366222 ctcttttagggttca-tattgagagagtggggaaacacaaatgggtagaatctaggtcttgttcttgtgtaag 19366293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 16 - 111
Target Start/End: Original strand, 27104234 - 27104330
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatc-aaaagtttccttttgttttttctcttaggattca 111  Q
    ||||||||||||||||||||| ||| ||||||| |||||||||||||||||||| ||| ||| ||||| |||||||||| |||||||||| ||||||    
T  27104234 tctcttgggttgggaaacattataagcaccttgggtagtgagatttcaccattggaagaatcaaaaagcttccttttgtgttttctcttaagattca 27104330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 9022724 - 9022835
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggat-caaaagtttccttttgttttttc 99  Q
    ||||||||| || | |||||||||||| ||||||||||||||||||| ||||||||||||||||||||| ||||||  ||||| ||||  |||  |||||    
T  9022724 tctttgtagtgaggttctcttgggttgagaaacattgtaaacacctttcgtagtgagatttcaccattggaaggataaaaaagcttcc--ttgagttttc 9022821  T
Q  100 tcttaggattcatt 113  Q
    ||||||||||||||    
T  9022822 tcttaggattcatt 9022835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 173 - 233
Target Start/End: Original strand, 27104362 - 27104423
Alignment:
Q  173 taagctaatttcttgtaactcttt-gtaacactttcatcatagtggattggagagctgctct 233  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  27104362 taagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagagctgctct 27104423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 181 - 233
Target Start/End: Original strand, 24787364 - 24787415
Alignment:
Q  181 tttcttgtaactctttgtaacactttcatcatagtggattggagagctgctct 233  Q
    ||||||||||| ||||||||||||||| ||||| |||||||||||||||||||    
T  24787364 tttcttgtaaccctttgtaacactttc-tcatattggattggagagctgctct 24787415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 16 - 113
Target Start/End: Original strand, 11031307 - 11031405
Alignment:
Q  16 tctcttgggttgggaaaca-ttgtaaacaccttgcgtagtgagatttcaccattgaaaggatc-aaaagtttccttttgt-tttttctcttaggattcat 112  Q
    ||||||||||||||||||| ||||||||||| || ||||||||  ||||  |||| ||||||| ||||| ||||||| || ||||||||||||||| |||    
T  11031307 tctcttgggttgggaaacatttgtaaacaccgtgggtagtgag--ttcattattggaaggatcaaaaagcttcctttagtgtttttctcttaggatacat 11031404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 48
Target Start/End: Complemental strand, 197140 - 197108
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    |||||||||||||||||||||||||||||||||    
T  197140 tctcttgggttgggaaacattgtaaacaccttg 197108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 48
Target Start/End: Complemental strand, 834399 - 834367
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    |||||||||||||||||||||||||||||||||    
T  834399 tctcttgggttgggaaacattgtaaacaccttg 834367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 48
Target Start/End: Original strand, 3189267 - 3189299
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    |||||||||||||||||||||||||||||||||    
T  3189267 tctcttgggttgggaaacattgtaaacaccttg 3189299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 48
Target Start/End: Original strand, 3198084 - 3198116
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    |||||||||||||||||||||||||||||||||    
T  3198084 tctcttgggttgggaaacattgtaaacaccttg 3198116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 48
Target Start/End: Original strand, 3206923 - 3206955
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    |||||||||||||||||||||||||||||||||    
T  3206923 tctcttgggttgggaaacattgtaaacaccttg 3206955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 48
Target Start/End: Complemental strand, 3847353 - 3847321
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    |||||||||||||||||||||||||||||||||    
T  3847353 tctcttgggttgggaaacattgtaaacaccttg 3847321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 48
Target Start/End: Original strand, 10925159 - 10925191
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    |||||||||||||||||||||||||||||||||    
T  10925159 tctcttgggttgggaaacattgtaaacaccttg 10925191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 48
Target Start/End: Complemental strand, 13316550 - 13316518
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    |||||||||||||||||||||||||||||||||    
T  13316550 tctcttgggttgggaaacattgtaaacaccttg 13316518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 48
Target Start/End: Original strand, 20762608 - 20762640
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    |||||||||||||||||||||||||||||||||    
T  20762608 tctcttgggttgggaaacattgtaaacaccttg 20762640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 48
Target Start/End: Complemental strand, 23555497 - 23555465
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    |||||||||||||||||||||||||||||||||    
T  23555497 tctcttgggttgggaaacattgtaaacaccttg 23555465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 48
Target Start/End: Complemental strand, 30476680 - 30476648
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    |||||||||||||||||||||||||||||||||    
T  30476680 tctcttgggttgggaaacattgtaaacaccttg 30476648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 48
Target Start/End: Complemental strand, 50167407 - 50167375
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    |||||||||||||||||||||||||||||||||    
T  50167407 tctcttgggttgggaaacattgtaaacaccttg 50167375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 194 - 233
Target Start/End: Complemental strand, 775757 - 775718
Alignment:
Q  194 tttgtaacactttcatcatagtggattggagagctgctct 233  Q
    ||||||||||||||||| ||||||||||||||||| ||||    
T  775757 tttgtaacactttcatcttagtggattggagagctactct 775718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 233
Target Start/End: Original strand, 25445079 - 25445128
Alignment:
Q  183 tcttgtaactctttgtaacactttcatcatagtggattggagagctgctct 233  Q
    |||||||||  |||||||||||||| ||||| |||||||||||||||||||    
T  25445079 tcttgtaaccttttgtaacactttc-tcatattggattggagagctgctct 25445128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 233
Target Start/End: Complemental strand, 41390676 - 41390627
Alignment:
Q  183 tcttgtaactctttgtaacactttcatcatagtggattggagagctgctct 233  Q
    |||||||||  |||||||||||||| ||||| |||||||||||||||||||    
T  41390676 tcttgtaaccttttgtaacactttc-tcatattggattggagagctgctct 41390627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 233
Target Start/End: Complemental strand, 41398331 - 41398282
Alignment:
Q  183 tcttgtaactctttgtaacactttcatcatagtggattggagagctgctct 233  Q
    |||||||||  |||||||||||||| ||||| |||||||||||||||||||    
T  41398331 tcttgtaaccttttgtaacactttc-tcatattggattggagagctgctct 41398282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 48
Target Start/End: Original strand, 44455098 - 44455128
Alignment:
Q  18 tcttgggttgggaaacattgtaaacaccttg 48  Q
    |||||||||||||||||||||||||||||||    
T  44455098 tcttgggttgggaaacattgtaaacaccttg 44455128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 233
Target Start/End: Original strand, 43988443 - 43988503
Alignment:
Q  173 taagctaatttcttgtaactcttt-gtaacactttcatcatagtggattggagagctgctct 233  Q
    |||||||  ||||||||||||||| ||||||| |||| |||| |||||||||||||||||||    
T  43988443 taagctagattcttgtaactcttttgtaacacattca-catattggattggagagctgctct 43988503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 225
Target Start/End: Original strand, 48382471 - 48382524
Alignment:
Q  173 taagctaatttcttgtaac-tctttgtaacactttcatcatagtggattggaga 225  Q
    |||| |||||||||||||| | |||||| ||||||||||||| |||||||||||    
T  48382471 taagttaatttcttgtaacctatttgtatcactttcatcatattggattggaga 48382524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 44
Target Start/End: Original strand, 777179 - 777207
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacac 44  Q
    |||||||||||||||||||||||||||||    
T  777179 tctcttgggttgggaaacattgtaaacac 777207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 48
Target Start/End: Original strand, 1833458 - 1833490
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    |||||||| ||||||||||||||||||||||||    
T  1833458 tctcttggattgggaaacattgtaaacaccttg 1833490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 48
Target Start/End: Complemental strand, 4552869 - 4552837
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    |||||||||||| ||||||||||||||||||||    
T  4552869 tctcttgggttgagaaacattgtaaacaccttg 4552837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 48
Target Start/End: Complemental strand, 13138206 - 13138174
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    ||||||||| |||||||||||||||||||||||    
T  13138206 tctcttggggtgggaaacattgtaaacaccttg 13138174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 48
Target Start/End: Original strand, 15820243 - 15820275
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    ||||||| |||||||||||||||||||||||||    
T  15820243 tctcttgagttgggaaacattgtaaacaccttg 15820275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 48
Target Start/End: Complemental strand, 28265786 - 28265754
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    |||||| ||||||||||||||||||||||||||    
T  28265786 tctcttaggttgggaaacattgtaaacaccttg 28265754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 48
Target Start/End: Original strand, 31659174 - 31659206
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    ||||||||||| |||||||||||||||||||||    
T  31659174 tctcttgggttcggaaacattgtaaacaccttg 31659206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 152; Significance: 2e-80; HSPs: 71)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 21630224 - 21629989
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatc-aaaagtttccttttgttttttc 99  Q
    ||||||||| || ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| ||||| |||||||||| |||||    
T  21630224 tctttgtagtgaggatctcttgggttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaaagcttccttttgtgttttc 21630125  T
Q  100 tcttaggattcattattgagagtgtaggtaacac-aaatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaactc-tttg 197  Q
    ||||||||||||||||||||||||| ||| |||| ||||||||||||||||  | ||| ||||||||||| || ||| ||||||||||||||||| ||||    
T  21630124 tcttaggattcattattgagagtgtgggtgacacaaaatgggtagaaattaagtcttgttcttgtgtaagcttataaactaatttcttgtaactcttttg 21630025  T
Q  198 taacactttcatcatagtggattggagagctgctct 233  Q
    ||||||||||||||||||||||||||||||||||||    
T  21630024 taacactttcatcatagtggattggagagctgctct 21629989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 28258995 - 28259228
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatcaaaagtttccttttgttttttct 100  Q
    ||||| ||| || |||||||||||||||||||||||||||||| |||| |||||||||||||||||||| |||||||||||| |||||||||| | ||||    
T  28258995 tctttatagtgaggatctcttgggttgggaaacattgtaaacatcttgggtagtgagatttcaccattggaaggatcaaaagcttccttttgtgtcttct 28259094  T
Q  101 ctt-aggattcattattgagagtgtaggtaacacaaatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaactctttgta 199  Q
    ||| |||  ||||||||||||| || || |||||||||||||||||||||||| ||| ||||||||||| ||  |||||| |||||||||||||||||||    
T  28259095 ctttaggggtcattattgagagagtgggaaacacaaatgggtagaaattagatcttgttcttgtgtaagcttgcaagctattttcttgtaactctttgta 28259194  T
Q  200 acactttcatcatagtggattggagagctgctct 233  Q
    ||||||||||||||||||||||||||||||||||    
T  28259195 acactttcatcatagtggattggagagctgctct 28259228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 15 - 226
Target Start/End: Original strand, 23078303 - 23078514
Alignment:
Q  15 atctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatcaaaagtttccttttgttttttctcttaggattcatta 114  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||| ||||| |||||||||||| |||||||||| | |||||||||| ||||| |    
T  23078303 atctcttgggttgggaaacattgtaaacaccttgggtagtgagatttcatcattggaaggatcaaaagcttccttttgtgtcttctcttagggttcatca 23078402  T
Q  115 ttgagagtgtaggtaacacaaatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaactctttgtaacactttcatcatag 214  Q
    |||||||||| ||||||||||||||||||||||||  | ||| ||||||||||| ||  |||||| |||||||||||||||| |||||||||||||||||    
T  23078403 ttgagagtgtgggtaacacaaatgggtagaaattaagtcttgttcttgtgtaagcttgcaagctattttcttgtaactctttctaacactttcatcatag 23078502  T
Q  215 tggattggagag 226  Q
    ||||||||||||    
T  23078503 tggattggagag 23078514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 36757580 - 36757809
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatcaaaagtttccttttgttttttct 100  Q
    ||||||||| || ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| |||||||||| | ||||    
T  36757580 tctttgtagtgaggatctcttgggttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaagcttccttttgtgtcttct 36757679  T
Q  101 c-ttaggattcattattgagagtgtaggtaacacaaatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaactctttgta 199  Q
    | ||||| ||||| |||||||| || ||||||||||||||||||||||||| | ||| ||||||||||| ||  |||||  |||||| |||||||||| |    
T  36757680 ctttagggttcatcattgagagagtgggtaacacaaatgggtagaaattaggttttgttcttgtgtaagcttgaaagcttttttcttataactctttgaa 36757779  T
Q  200 acactttcatcatagtggattggagagctg 229  Q
    |||||||||||||| |||||||||||||||    
T  36757780 acactttcatcatactggattggagagctg 36757809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 10707070 - 10707296
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatc-aaaagtttccttttgttttttc 99  Q
    ||||||||| || |||||||||||||| |||||||||||||||||||| ||||| |||||||||||||  ||||||| ||||| |||||||||| |||||    
T  10707070 tctttgtagtgaggatctcttgggttgagaaacattgtaaacaccttgggtagttagatttcaccattagaaggatcaaaaagcttccttttgtgttttc 10707169  T
Q  100 tcttaggattcattattgagagtgtaggtaacacaaatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaactc-tttgt 198  Q
    |||||||||||| ||||| ||| || ||| ||||| ||||||||||||||| | ||| ||||||||||| || ||||||||||||||||||||| |||||    
T  10707170 tcttaggattca-tattgtgagagtgggtgacacagatgggtagaaattaggtcttgttcttgtgtaagcttgtaagctaatttcttgtaactcttttgt 10707268  T
Q  199 aacactttcatcatagtggattggagag 226  Q
    ||||||||||||||||||||||||||||    
T  10707269 aacactttcatcatagtggattggagag 10707296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 39483212 - 39482977
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatc-aaaagtttccttttgttttttc 99  Q
    ||||||| | || ||||||||||||||||||| ||||||||||||||| |||||||||||||||||||| || |||| ||||  |||||||||| |||||    
T  39483212 tctttgttgtgaggatctcttgggttgggaaatattgtaaacaccttgggtagtgagatttcaccattggaatgatcaaaaaacttccttttgtgttttc 39483113  T
Q  100 tcttaggattcattattgagagtgtaggtaaca-caaatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaactc-tttg 197  Q
    ||||||||||||||||||||||||| ||| |||  ||||||||||||||||| | ||| ||||||||||| || ||||||||||||||||||||| ||||    
T  39483112 tcttaggattcattattgagagtgtgggtgacataaaatgggtagaaattaggtcttgttcttgtgtaagcttataagctaatttcttgtaactcttttg 39483013  T
Q  198 taacactttcatcatagtggattggagagctgctct 233  Q
    ||||| |||||||||||||||||||||  |||||||    
T  39483012 taacattttcatcatagtggattggaggcctgctct 39482977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 14698827 - 14699058
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatc-aaaagtttccttttgttttttc 99  Q
    ||||||||| || ||||||| ||||||||||||||||||||||||||| ||||||||||||||| |||| ||||||| ||||| |||||||||| |||||    
T  14698827 tctttgtagtgaggatctctcgggttgggaaacattgtaaacaccttgggtagtgagatttcactattggaaggatcaaaaagcttccttttgtgttttc 14698926  T
Q  100 tcttaggattcattattgagagtgtaggtaacac-aaatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaactc-tttg 197  Q
    |||||||||||   ||||||||||| ||| |||| ||||||||||||||||| | ||| ||||||||||| || ||||||||||||||||||||| ||||    
T  14698927 tcttaggattc---attgagagtgtgggtgacacaaaatgggtagaaattaggtcttgttcttgtgtaagcttataagctaatttcttgtaactcttttg 14699023  T
Q  198 taacactttcatcatagtggattggagagctgctct 233  Q
    |||| |||||||||||||||||||||| ||||||||    
T  14699024 taac-ctttcatcatagtggattggagggctgctct 14699058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 22 - 233
Target Start/End: Complemental strand, 31056301 - 31056090
Alignment:
Q  22 gggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatc-aaaagtttccttttgttttttctcttaggattcattattgaga 120  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| |||||||||| ||||||||||||||||   |||||||    
T  31056301 gggttgggaaacattgtaaacaccttgggtagtgagatttcaccattgaaaggatcaaaaagcttccttttgtgttttctcttaggattc---attgaga 31056205  T
Q  121 gtgtaggtaacac-aaatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaactc-tttgtaacactttcatcatagtgga 218  Q
    |||| ||| |||| ||||||||||||||||| | ||| |||| |||||| || ||||||||||| ||||||||| ||||||||||||||||| |||||||    
T  31056204 gtgtgggtgacacaaaatgggtagaaattaggtcttgttcttttgtaagcttataagctaatttattgtaactcttttgtaacactttcatcttagtgga 31056105  T
Q  219 ttggagagctgctct 233  Q
    |||||||||||||||    
T  31056104 ttggagagctgctct 31056090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 13569608 - 13569374
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatc-aaaagtttccttttgttttttc 99  Q
    ||||||||| || ||||||||||||||||||||||| |||||||||||  ||||||||||||||||||| ||||||| ||||| |||||||||| |||||    
T  13569608 tctttgtagtgaggatctcttgggttgggaaacattataaacaccttggatagtgagatttcaccattggaaggatcaaaaagcttccttttgtgttttc 13569509  T
Q  100 tcttaggattcattattgagagtgtaggtaacaca-aatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaactc-tttg 197  Q
    |||||||||||| ||||| ||| || ||| ||| | || ||||||||||||| | ||| ||||||||||  || ||||||||||||||||||||| ||||    
T  13569508 tcttaggattca-tattgtgagagtgggtgacaaacaaagggtagaaattaggtcttgttcttgtgtaaacttataagctaatttcttgtaactcttttg 13569410  T
Q  198 taacactttcatcatagtggattggagagctgctct 233  Q
    ||||||||||||||||||||||||||||||||||||    
T  13569409 taacactttcatcatagtggattggagagctgctct 13569374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 17865484 - 17865249
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatc-aaaagtttccttttgttttttc 99  Q
    ||||||||| || ||||||||||||||||||||||||||||||||||| ||||||||||||||| | |  ||||||| ||||| |||||||||| |||||    
T  17865484 tctttgtagtgaagatctcttgggttgggaaacattgtaaacaccttgggtagtgagatttcacaaatagaaggatcaaaaagcttccttttgtgttttc 17865385  T
Q  100 tcttaggattcattattgagagtgtaggtaaca-caaatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaactc-tttg 197  Q
    ||||||||||||||||||||||||| | | |||  |||| |||||||||||  | ||| ||||||||||| || ||||||||||||||||||||| ||||    
T  17865384 tcttaggattcattattgagagtgtggatgacataaaataggtagaaattatgtcttgttcttgtgtaagcttataagctaatttcttgtaactcttttg 17865285  T
Q  198 taacactttcatcatagtggattggagagctgctct 233  Q
    ||||||||||||||||||||||||||| | ||||||    
T  17865284 taacactttcatcatagtggattggagggttgctct 17865249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 33528442 - 33528672
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatc-aaaagtttccttttgttttttc 99  Q
    ||||||||| || ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||| ||||| |||||||||| |||||    
T  33528442 tctttgtagtgaggatctcttgggttgggaaacattgtaaacacattgggtagtgagatttcaccattggaaggatcaaaaagcttccttttgtgttttc 33528541  T
Q  100 tcttaggattcattattgagagtgtaggtaacac-aaatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaactc-tttg 197  Q
    ||||||||||||||||||||||| | ||| |||| ||||||||||||||||| | ||| ||||     || || ||||||||||||||||||||| ||||    
T  33528542 tcttaggattcattattgagagtttgggtgacacaaaatgggtagaaattaggtcttgttctt-----agcttataagctaatttcttgtaactcttttg 33528636  T
Q  198 taacactttcatcatagtggattggagagctgctct 233  Q
    ||||||||||||||||||||||||||| | ||||||    
T  33528637 taacactttcatcatagtggattggagggttgctct 33528672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 22 - 233
Target Start/End: Complemental strand, 8040322 - 8040106
Alignment:
Q  22 gggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatc-aaaagtttccttttgt-tttttctcttaggattcattattgag 119  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| ||||| |||||||| | |||||||||||||||||| ||||| |    
T  8040322 gggttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaaagcttccttttatgtttttctcttaggattca-tattgtg 8040224  T
Q  120 agtgtaggtaacac-aaatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaactc---tttgtaacactttcatcatagt 215  Q
    || || ||| |||| ||||||||||||||||| | ||| ||||||||||| || |||||||||||||||||||||   ||||||||||||||||||||||    
T  8040223 agagtgggtgacacaaaatgggtagaaattaggtcttgttcttgtgtaagcttgtaagctaatttcttgtaactctcttttgtaacactttcatcatagt 8040124  T
Q  216 ggattggagagctgctct 233  Q
    ||||||||||||||||||    
T  8040123 ggattggagagctgctct 8040106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 8389967 - 8390201
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatc-aaaagtttccttttgttttttc 99  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||||  ||||||||||| ||||||| ||| ||| ||||| ||||| |||| |||||    
T  8389967 tctttgtagtgatgatctcttgggttaggaaacattgtaaacaccttggatagtgagattttaccattggaagaatcaaaaagcttcctcttgtgttttc 8390066  T
Q  100 tcttaggattcattattgagagtgtaggtaacac-aaatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaactc-tttg 197  Q
    |||||||||||| ||||| ||| || ||| |||| ||||||||||||||||| | ||| ||||||| ||| || ||||||||||||||||||||| |||     
T  8390067 tcttaggattca-tattgtgagagtgggtgacacaaaatgggtagaaattaggtcttgttcttgtgcaagcttgtaagctaatttcttgtaactcttttt 8390165  T
Q  198 taacactttcatcatagtggattggagagctgctct 233  Q
    ||||||||||||||||||||||||||||||||||||    
T  8390166 taacactttcatcatagtggattggagagctgctct 8390201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 34389130 - 34388904
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatc-aaaagtttccttttgttttttc 99  Q
    ||||||||| || ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| ||||| |||||||||| |||||    
T  34389130 tctttgtagtgaggatctcttgggttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaaagcttccttttgtgttttc 34389031  T
Q  100 tcttaggattcattattgagagtgtaggtaacac-aaatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaactc-tttg 197  Q
    |||||||||||| ||||| ||| || ||| |||| ||||||||||||||||| | ||| |||||||        ||||||||||||||||||||| ||||    
T  34389030 tcttaggattca-tattgtgagagtgggtgacacaaaatgggtagaaattaggtcttgttcttgtg--------taagctaatttcttgtaactcttttg 34388940  T
Q  198 taacactttcatcatagtggattggagagctgctct 233  Q
    ||||||||||||||||||||||||||||||| ||||    
T  34388939 taacactttcatcatagtggattggagagctactct 34388904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 33118414 - 33118182
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatc-aaaagtttccttttgttttttc 99  Q
    ||||||||| || |||||||||||||||| |||||||||||||||||| ||||||||||||| |||||| ||||||| ||||| |||||||||| |||||    
T  33118414 tctttgtagtgaggatctcttgggttggggaacattgtaaacaccttgggtagtgagatttcgccattggaaggatcaaaaagcttccttttgtgttttc 33118315  T
Q  100 tcttaggattcattattgagagtgtaggtaacac-aaatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaact-ctttg 197  Q
    ||||| |||||   ||||||||||  ||| |||| ||||||||||||||||  | ||| ||||||||||| || ||||||||||||||||||||  ||||    
T  33118314 tcttaagattc---attgagagtgagggtgacacaaaatgggtagaaattaagtcttgttcttgtgtaagcttataagctaatttcttgtaactattttg 33118218  T
Q  198 taacactttcatcatagtggattggagagctgctct 233  Q
    |||| |||||||||||||||||||||| ||||||||    
T  33118217 taactctttcatcatagtggattggagggctgctct 33118182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 20522501 - 20522266
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatc-aaaagtttccttttgttttttc 99  Q
    ||||||||| ||  ||||||||||||||||| ||||||||||| |||| |||||||||||||||||||  || |||| ||||| |||||||||| ||||     
T  20522501 tctttgtagtgagtatctcttgggttgggaagcattgtaaacaacttgggtagtgagatttcaccatttgaatgatcaaaaagcttccttttgtgttttt 20522402  T
Q  100 tcttaggattcattattgagagtgtaggtaacac-aaatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaactc-tttg 197  Q
    |||||||| |||||||||||||||| ||| |||| ||||||||||||||||  | ||| |||| |||||| || ||| ||||||||||||||| | ||||    
T  20522401 tcttaggactcattattgagagtgtgggtgacacaaaatgggtagaaattaagtcttgttcttttgtaagcttataatctaatttcttgtaacccttttg 20522302  T
Q  198 taacactttcatcatagtggattggagagctgctct 233  Q
    ||||||||||||||||||||||||||| | ||||||    
T  20522301 taacactttcatcatagtggattggagggttgctct 20522266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 24 - 233
Target Start/End: Original strand, 34682174 - 34682385
Alignment:
Q  24 gttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatcaaaa-gtttccttttgttttttctcttaggattcattattgagagt 122  Q
    ||||| ||||||||||||||||||| ||||||||||||||||| |  ||||||||||| |||||||||||| |||||||||||||||||   ||| |||     
T  34682174 gttggaaaacattgtaaacaccttgggtagtgagatttcaccacttgaaggatcaaaatgtttccttttgtgttttctcttaggattca-ccttgtgaga 34682272  T
Q  123 gtaggtaacac-aaatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaactc-tttgtaacactttcatcatagtggatt 220  Q
    || ||| |||| ||||||||||||||||  | ||| |||||||||||  | ||||||||||||||||||||| |||||||||||||||| ||||||||||    
T  34682273 gtgggtgacacaaaatgggtagaaattaagtcttgttcttgtgtaagcctgtaagctaatttcttgtaactcttttgtaacactttcattatagtggatt 34682372  T
Q  221 ggagagctgctct 233  Q
    |||||||||||||    
T  34682373 ggagagctgctct 34682385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 3492033 - 3491796
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaa--cattgtaaacaccttgcgtagtgagatttcaccattgaaaggatcaaaagtttccttttgtttttt 98  Q
    ||||||||| || ||||||||||||||| |||  |||||||||||||||| ||||||||||| |||||||| |||||||  ||| ||||| |||| | ||    
T  3492033 tctttgtagtgaggatctcttgggttggaaaaaacattgtaaacaccttgggtagtgagattccaccattggaaggatcttaagcttcctcttgtgtctt 3491934  T
Q  99 ctctt--aggattcattat-tgagagtgtaggtaacacaaatgggtagaaattagatattgctcttgtgtaagtttctaagctaattt-cttgtaactct 194  Q
    |||||  ||| |||||  | ||||||||  || |||||||||||||||||  ||| | ||| ||||||||||| ||  |||||| ||| |||||||| ||    
T  3491933 ctcttttagggttcatattgtgagagtgg-ggaaacacaaatgggtagaatctaggtcttgttcttgtgtaagcttgcaagctatttttcttgtaaccct 3491835  T
Q  195 ttgtaacactttcatcatagtggattggagagctgctct 233  Q
    |||||||||||||||||||||||||||||||||||||||    
T  3491834 ttgtaacactttcatcatagtggattggagagctgctct 3491796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 16 - 224
Target Start/End: Complemental strand, 40015189 - 40014980
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatc-aaaagtttccttttgttttttctcttaggattcatta 114  Q
    ||||||||||||||||||||||||||||| |||  ||||||||||||||||||| ||||||| ||||| ||||||||||  ||| |||||||||   |||    
T  40015189 tctcttgggttgggaaacattgtaaacacattggatagtgagatttcaccattggaaggatcaaaaagcttccttttgtgatttttcttaggat---tta 40015093  T
Q  115 ttgagagtgtaggtaaca--caaatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaactc-tttgtaacactttcatca 211  Q
    |||||||||| ||| |||   ||||| ||||||||||| | ||| |||| ||| ||||| ||||||||||||| | ||||| |||||| ||||||||||     
T  40015092 ttgagagtgtgggtgacatgaaaatgagtagaaattaggtcttgttcttttgtgagtttttaagctaatttctcgcaactcatttgtatcactttcatct 40014993  T
Q  212 tagtggattggag 224  Q
    |||||||||||||    
T  40014992 tagtggattggag 40014980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 2869510 - 2869744
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatcaaaa-gtttccttttgttttttc 99  Q
    ||||||||| || | ||||||| ||||| ||||||||||||||| ||| ||||||||||||| |||||| ||| ||||||| | |||| || || |||||    
T  2869510 tctttgtagtgaggttctcttgagttggaaaacattgtaaacacattgggtagtgagatttcgccattggaagaatcaaaaagcttccgttagtgttttc 2869609  T
Q  100 tcttaggattcattattgagagtgtaggtaac---acaaatgggtagaaatta-gatattgctcttgtgtaagtttctaagctaatttcttgtaact-ct 194  Q
    ||||||||||||||   |||||||| ||| ||   | |||||||||||||||| | | ||| |||| ||| || || |||||||||||||||||||| ||    
T  2869610 tcttaggattcatt---gagagtgtgggtgacttgaaaaatgggtagaaattaggtttttgttctt-tgtgagcttttaagctaatttcttgtaactcct 2869705  T
Q  195 ttgtaacactttcatcatagtggattggagagctgctct 233  Q
    ||||| |||||||||| ||||||||||||||||| ||||    
T  2869706 ttgtatcactttcatcttagtggattggagagctactct 2869744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 40739113 - 40738888
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatcaaaagtttccttttgttttttct 100  Q
    ||||||||| || ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| |||||||||||| || || |||| | ||||    
T  40739113 tctttgtagtgaggatctcttgggttgggaaacattgtaaacaccttgggtaatgagatttcaccattggaaggatcaaaagcttactattgtgtcttct 40739014  T
Q  101 c--ttaggattcat-tattgagagtgtaggtaacacaaatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaactctttg 197  Q
    |  ||||| ||||| |  ||||||||  || |||||||||||||||||| ||    ||| ||||||||||| ||  |||||| |||        || |||    
T  40739013 cttttagggttcatattgtgagagtg-gggaaacacaaatgggtagaaactaagacttgttcttgtgtaagcttgcaagctatttt--------tc-ttg 40738924  T
Q  198 taacactttcatcatagtggattggagagctgctct 233  Q
    ||||||||||||||||||||||||||||||||||||    
T  40738923 taacactttcatcatagtggattggagagctgctct 40738888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 134 - 233
Target Start/End: Original strand, 10445395 - 10445495
Alignment:
Q  134 aaatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaactc-tttgtaacactttcatcatagtggattggagagctgctc 232  Q
    ||||||||||||||||| | ||| ||||||||||| || ||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  10445395 aaatgggtagaaattaggtcttgttcttgtgtaagattgtaagctaatttcttgtaactcttttgtaacactttcataatagtggattggagagctgctc 10445494  T
Q  233 t 233  Q
    |    
T  10445495 t 10445495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 84 - 233
Target Start/End: Original strand, 42039570 - 42039720
Alignment:
Q  84 ttccttttgttttttctcttaggattcattattgagagtgtaggtaacacaaa-tgggtagaaattagatattgctcttgtgtaagtttctaagctaatt 182  Q
    |||||||| | |||||||||||||||||| |||| ||| || ||| ||||||| |||||||||||||| | ||| | ||||||||| ||  |||||||||    
T  42039570 ttccttttatgttttctcttaggattcat-attgtgagagtgggtgacacaaaatgggtagaaattaggtcttgtttttgtgtaagcttgcaagctaatt 42039668  T
Q  183 t-cttgtaactctttgtaacactttcatcatagtggattggagagctgctct 233  Q
    | |||||||||||| |||||||||||||||||||||||| ||||||||||||    
T  42039669 ttcttgtaactcttcgtaacactttcatcatagtggattagagagctgctct 42039720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 10445285 - 10445378
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatc-aaaagtttccttttgt 93  Q
    ||||||||| || | ||||| ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| ||||| ||||||||||    
T  10445285 tctttgtagtgaggttctctcgggttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaaagcttccttttgt 10445378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 15903708 - 15903932
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatcaaaa-gtttccttttgttttttc 99  Q
    ||||||||| || | ||||||||||| ||||||||||||||||| |||  || |||||||||||||||| || ||| |||| | || ||||||| |||||    
T  15903708 tctttgtagtgaggttctcttgggttaggaaacattgtaaacacattggataatgagatttcaccattggaatgataaaaaagatttcttttgtgttttc 15903807  T
Q  100 tcttaggattcattattgagagtgtaggtaac---acaaatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaactc-tt 195  Q
    || |||||||||||   |||||||| ||| ||   | ||||||||||||||||||  ||| |||| ||| || || ||||||| ||||||||||| | ||    
T  15903808 tcataggattcatt---gagagtgtgggtgacttgaaaaatgggtagaaattagaatttgttctt-tgtgagcttgtaagcta-tttcttgtaacccctt 15903902  T
Q  196 tgtaacactttcatcatagtggattggaga 225  Q
    |||| |||||| ||| ||||||||||||||    
T  15903903 tgtatcacttttatcttagtggattggaga 15903932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 129 - 233
Target Start/End: Complemental strand, 25398646 - 25398541
Alignment:
Q  129 aacacaaatgggtagaaattagatattgctcttgtgtaagtttctaagctaattt-cttgtaactctttgtaacactttcatcatagtggattggagagc 227  Q
    |||||||||||||||||| |||   ||| ||||||||||| ||  |||||| ||| |||||||| |||||||||||||||||||||||||||||||||||    
T  25398646 aacacaaatgggtagaaactaggacttgttcttgtgtaagcttgcaagctatttttcttgtaaccctttgtaacactttcatcatagtggattggagagc 25398547  T
Q  228 tgctct 233  Q
    ||||||    
T  25398546 tgctct 25398541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 129 - 233
Target Start/End: Complemental strand, 25403784 - 25403679
Alignment:
Q  129 aacacaaatgggtagaaattagatattgctcttgtgtaagtttctaagctaattt-cttgtaactctttgtaacactttcatcatagtggattggagagc 227  Q
    |||||||||||||||||| |||   ||| ||||||||||| ||  |||||| ||| |||||||| |||||||||||||||||||||||||||||||||||    
T  25403784 aacacaaatgggtagaaactaggacttgttcttgtgtaagcttgcaagctatttttcttgtaaccctttgtaacactttcatcatagtggattggagagc 25403685  T
Q  228 tgctct 233  Q
    ||||||    
T  25403684 tgctct 25403679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 129 - 233
Target Start/End: Complemental strand, 25407773 - 25407668
Alignment:
Q  129 aacacaaatgggtagaaattagatattgctcttgtgtaagtttctaagctaattt-cttgtaactctttgtaacactttcatcatagtggattggagagc 227  Q
    |||||||||||||||||| |||   ||| ||||||||||| ||  |||||| ||| |||||||| |||||||||||||||||||||||||||||||||||    
T  25407773 aacacaaatgggtagaaactaggacttgttcttgtgtaagcttgcaagctatttttcttgtaaccctttgtaacactttcatcatagtggattggagagc 25407674  T
Q  228 tgctct 233  Q
    ||||||    
T  25407673 tgctct 25407668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 25409912 - 25409842
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaa--cattgtaaacaccttgcgtagtgagatttcaccattg 69  Q
    |||||||||||| |||||||||||||||||||  |||||||||||||||| ||||||||||||||||||||    
T  25409912 tctttgtagagaggatctcttgggttgggaaaaacattgtaaacaccttgggtagtgagatttcaccattg 25409842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 22 - 113
Target Start/End: Original strand, 2837868 - 2837961
Alignment:
Q  22 gggttgggaaacattgtaaacaccttgcgtagtgag-atttcaccattgaaaggatcaaaagt-ttccttttgttttttctcttaggattcatt 113  Q
    |||||||||||||||||||||||||||  ||||||| |||||||||||| |||||| |||| | ||||||| || |||||||||||||||||||    
T  2837868 gggttgggaaacattgtaaacaccttggatagtgagaatttcaccattggaaggataaaaaatattcctttagtgttttctcttaggattcatt 2837961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 181 - 233
Target Start/End: Original strand, 9296400 - 9296452
Alignment:
Q  181 tttcttgtaactctttgtaacactttcatcatagtggattggagagctgctct 233  Q
    ||||||||||| ||||||||||||||||||||| |||||||||||||||||||    
T  9296400 tttcttgtaaccctttgtaacactttcatcatattggattggagagctgctct 9296452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 181 - 233
Target Start/End: Original strand, 11098926 - 11098978
Alignment:
Q  181 tttcttgtaactctttgtaacactttcatcatagtggattggagagctgctct 233  Q
    ||||||||||| ||||||||||||||||||||| |||||||||||||||||||    
T  11098926 tttcttgtaaccctttgtaacactttcatcatattggattggagagctgctct 11098978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 181 - 233
Target Start/End: Complemental strand, 14291586 - 14291534
Alignment:
Q  181 tttcttgtaactctttgtaacactttcatcatagtggattggagagctgctct 233  Q
    ||||||||||| ||||||||||||||||||||| |||||||||||||||||||    
T  14291586 tttcttgtaaccctttgtaacactttcatcatattggattggagagctgctct 14291534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 21 - 113
Target Start/End: Complemental strand, 35397768 - 35397676
Alignment:
Q  21 tgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatcaaaagtttccttttgttttttctcttaggattcatt 113  Q
    |||||||| |||||||||||  |||||| |||||||||||||||||||| ||||||||| |  |||   |||| |||||||||||||||||||    
T  35397768 tgggttggaaaacattgtaattaccttgggtagtgagatttcaccattggaaggatcaataacttcaaattgtattttctcttaggattcatt 35397676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 173 - 234
Target Start/End: Original strand, 16940199 - 16940261
Alignment:
Q  173 taagctaatttcttgtaactcttt-gtaacactttcatcatagtggattggagagctgctctt 234  Q
    |||||||||||||||||| ||||| |||||||||||||||||||||||||||| |||| ||||    
T  16940199 taagctaatttcttgtaattcttttgtaacactttcatcatagtggattggagggctgatctt 16940261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 173 - 234
Target Start/End: Original strand, 17010864 - 17010926
Alignment:
Q  173 taagctaatttcttgtaactcttt-gtaacactttcatcatagtggattggagagctgctctt 234  Q
    |||||||||||||||||| ||||| |||||||||||||||||||||||||||| |||| ||||    
T  17010864 taagctaatttcttgtaattcttttgtaacactttcatcatagtggattggagggctgatctt 17010926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 113
Target Start/End: Original strand, 18674235 - 18674331
Alignment:
Q  18 tcttgggttgggaaacatt-gtaaacaccttgcgtagtgagatttcaccattgaaaggatc-aaaagtttccttttgttttttctcttaggattcatt 113  Q
    ||||||||||||||||||| |||||||||||| | ||||||||||||  |||| ||||||| ||||| |||||||  | |||||||||| ||||||||    
T  18674235 tcttgggttgggaaacattcgtaaacaccttgagcagtgagatttcattattg-aaggatcaaaaagcttcctttaatgttttctcttatgattcatt 18674331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 173 - 233
Target Start/End: Original strand, 27149284 - 27149345
Alignment:
Q  173 taagctaatttcttgtaactc-tttgtaacactttcatcatagtggattggagagctgctct 233  Q
    |||| ||||||||||| || | |||||| ||||||||| |||||||||||||||||||||||    
T  27149284 taaggtaatttcttgttacccctttgtatcactttcattatagtggattggagagctgctct 27149345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 48
Target Start/End: Complemental strand, 2334649 - 2334617
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    |||||||||||||||||||||||||||||||||    
T  2334649 tctcttgggttgggaaacattgtaaacaccttg 2334617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 48
Target Start/End: Complemental strand, 4484562 - 4484530
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    |||||||||||||||||||||||||||||||||    
T  4484562 tctcttgggttgggaaacattgtaaacaccttg 4484530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 48
Target Start/End: Complemental strand, 4503364 - 4503332
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    |||||||||||||||||||||||||||||||||    
T  4503364 tctcttgggttgggaaacattgtaaacaccttg 4503332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 48
Target Start/End: Complemental strand, 5723486 - 5723454
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    |||||||||||||||||||||||||||||||||    
T  5723486 tctcttgggttgggaaacattgtaaacaccttg 5723454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 48
Target Start/End: Complemental strand, 11151823 - 11151791
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    |||||||||||||||||||||||||||||||||    
T  11151823 tctcttgggttgggaaacattgtaaacaccttg 11151791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 48
Target Start/End: Original strand, 11690437 - 11690469
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    |||||||||||||||||||||||||||||||||    
T  11690437 tctcttgggttgggaaacattgtaaacaccttg 11690469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 48
Target Start/End: Complemental strand, 14202639 - 14202607
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    |||||||||||||||||||||||||||||||||    
T  14202639 tctcttgggttgggaaacattgtaaacaccttg 14202607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 48
Target Start/End: Original strand, 29867805 - 29867837
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    |||||||||||||||||||||||||||||||||    
T  29867805 tctcttgggttgggaaacattgtaaacaccttg 29867837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 48
Target Start/End: Complemental strand, 34140003 - 34139971
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    |||||||||||||||||||||||||||||||||    
T  34140003 tctcttgggttgggaaacattgtaaacaccttg 34139971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 48
Target Start/End: Original strand, 36773498 - 36773530
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    |||||||||||||||||||||||||||||||||    
T  36773498 tctcttgggttgggaaacattgtaaacaccttg 36773530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 48
Target Start/End: Original strand, 39284821 - 39284853
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    |||||||||||||||||||||||||||||||||    
T  39284821 tctcttgggttgggaaacattgtaaacaccttg 39284853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 48
Target Start/End: Original strand, 42362288 - 42362320
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    |||||||||||||||||||||||||||||||||    
T  42362288 tctcttgggttgggaaacattgtaaacaccttg 42362320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 48
Target Start/End: Original strand, 45099691 - 45099723
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    |||||||||||||||||||||||||||||||||    
T  45099691 tctcttgggttgggaaacattgtaaacaccttg 45099723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 182 - 233
Target Start/End: Original strand, 44312613 - 44312663
Alignment:
Q  182 ttcttgtaactctttgtaacactttcatcatagtggattggagagctgctct 233  Q
    ||||||||||  |||||||||||||| ||||| |||||||||||||||||||    
T  44312613 ttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctct 44312663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 1344362 - 1344432
Alignment:
Q  1 tctttgtagagatgatctcttg-ggttgggaaacattgtaaacaccttgcgtagtgag-atttcaccattg 69  Q
    ||||||||| || | ||||||| ||||||||||||||||||||| |||  |||||||| ||||||||||||    
T  1344362 tctttgtagtgaggttctcttgaggttgggaaacattgtaaacatcttcggtagtgagaatttcaccattg 1344432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 233
Target Start/End: Complemental strand, 32246883 - 32246834
Alignment:
Q  183 tcttgtaactctttgtaacactttcatcatagtggattggagagctgctct 233  Q
    |||||||||  |||||||||||||| ||||| |||||||||||||||||||    
T  32246883 tcttgtaaccttttgtaacactttc-tcatattggattggagagctgctct 32246834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 233
Target Start/End: Original strand, 39811978 - 39812027
Alignment:
Q  183 tcttgtaactctttgtaacactttcatcatagtggattggagagctgctct 233  Q
    |||||||||  |||||||||||||| ||||| |||||||||||||||||||    
T  39811978 tcttgtaaccttttgtaacactttc-tcatattggattggagagctgctct 39812027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 61
Target Start/End: Original strand, 41586383 - 41586429
Alignment:
Q  16 tctcttgggttgggaaaca-ttgtaaacaccttgcgtagtgagattt 61  Q
    ||||||||||||| ||||| |||||||||||||| ||||||||||||    
T  41586383 tctcttgggttggaaaacagttgtaaacaccttgggtagtgagattt 41586429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 225
Target Start/End: Original strand, 2838024 - 2838073
Alignment:
Q  177 ctaatttcttgtaactc-tttgtaacactttcatcatagtggattggaga 225  Q
    ||||||||||||||||| |||||| |||||||||  ||||||||||||||    
T  2838024 ctaatttcttgtaactcatttgtatcactttcattttagtggattggaga 2838073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 233
Target Start/End: Original strand, 28770608 - 28770825
Alignment:
Q  18 tcttgggttgggaaacatt-gtaaacaccttgcgtagtgagatttcaccattgaaaggatcaaaa-gtttccttttgttttttctcttaggattcattat 115  Q
    |||| |||||| ||||||| |||||||||||| |||||||||| |||  |    |||||| |||| ||||||||| || |||||||||||||||||||      
T  28770608 tctttggttggaaaacatttgtaaacaccttgggtagtgagatctcattagctgaaggataaaaaagtttcctttagtgttttctcttaggattcatt-- 28770705  T
Q  116 tgagagtgtaggtaac---acaaatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaa-ctctttgtaacactttcatca 211  Q
     | ||||||   | ||   | ||||||||||||||||||  ||| |||| ||| || || ||||||||||||||||||  |||||||| || | | |||     
T  28770706 -gcgagtgtgtatgacttgaaaaatgggtagaaattagagtttgttctt-tgtgagcttttaagctaatttcttgtaatatctttgtatcattcttatcg 28770803  T
Q  212 tagtggattggagagctgctct 233  Q
    ||| |||| |||||||||||||    
T  28770804 tagaggatcggagagctgctct 28770825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 48
Target Start/End: Complemental strand, 723972 - 723944
Alignment:
Q  20 ttgggttgggaaacattgtaaacaccttg 48  Q
    |||||||||||||||||||||||||||||    
T  723972 ttgggttgggaaacattgtaaacaccttg 723944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 63
Target Start/End: Complemental strand, 3278265 - 3278217
Alignment:
Q  16 tctcttgggttgggaaacatt-gtaaacaccttgcgtagtgagatttca 63  Q
    ||||||||||||| ||||||| ||||||||||||  |||||||||||||    
T  3278265 tctcttgggttggaaaacatttgtaaacaccttggatagtgagatttca 3278217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 88
Target Start/End: Original strand, 9296232 - 9296303
Alignment:
Q  20 ttgggttgggaaa--cattgtaaacaccttgcgtagtga-gatttcaccattgaaaggatcaaaagtttcct 88  Q
    |||||||||||||  |||||||| ||||||| ||||||| || |||||||||| ||||||| |||| |||||    
T  9296232 ttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcaccattggaaggatctaaagcttcct 9296303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 48
Target Start/End: Complemental strand, 14634054 - 14634026
Alignment:
Q  20 ttgggttgggaaacattgtaaacaccttg 48  Q
    |||||||||||||||||||||||||||||    
T  14634054 ttgggttgggaaacattgtaaacaccttg 14634026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 48
Target Start/End: Complemental strand, 17057601 - 17057569
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    ||||||||||||||||| |||||||||||||||    
T  17057601 tctcttgggttgggaaatattgtaaacaccttg 17057569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 48
Target Start/End: Complemental strand, 17085584 - 17085552
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    ||||||||||||||||| |||||||||||||||    
T  17085584 tctcttgggttgggaaatattgtaaacaccttg 17085552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 19344518 - 19344467
Alignment:
Q  182 ttcttgtaactcttt-gtaacactttcatcatagtggattggagagctgctct 233  Q
    ||||||||||||||| ||||||| |||| |||| |||||||||||||||||||    
T  19344518 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctct 19344467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 19349376 - 19349325
Alignment:
Q  182 ttcttgtaactcttt-gtaacactttcatcatagtggattggagagctgctct 233  Q
    ||||||||||||||| ||||||| |||| |||| |||||||||||||||||||    
T  19349376 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctct 19349325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 48
Target Start/End: Original strand, 24885597 - 24885629
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    |||| ||||||||||||||||||||||||||||    
T  24885597 tctcatgggttgggaaacattgtaaacaccttg 24885629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 48
Target Start/End: Complemental strand, 33162682 - 33162650
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    ||||||| |||||||||||||||||||||||||    
T  33162682 tctcttgagttgggaaacattgtaaacaccttg 33162650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 48
Target Start/End: Complemental strand, 36205895 - 36205863
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    |||||||||||||||||||| ||||||||||||    
T  36205895 tctcttgggttgggaaacatggtaaacaccttg 36205863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 48
Target Start/End: Complemental strand, 36988307 - 36988275
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    |||||||||||||||||||| ||||||||||||    
T  36988307 tctcttgggttgggaaacatagtaaacaccttg 36988275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 48
Target Start/End: Original strand, 38312176 - 38312208
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    |||||||||||||||||||||||| ||||||||    
T  38312176 tctcttgggttgggaaacattgtatacaccttg 38312208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 150; Significance: 3e-79; HSPs: 65)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 9353150 - 9353383
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatcaaaagtttccttttgttttttct 100  Q
    ||||||||| || ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| |||||||||| | ||||    
T  9353150 tctttgtagtgaggatctcttgggttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaagcttccttttgtgtcttct 9353249  T
Q  101 ctt-aggattcattattgagagtgtaggtaacacaaatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaactctttgta 199  Q
    ||| | | |||||||||||||| || || |||||||||||||||||||||||| ||| ||||||||||| ||  |||||  |||||||||||||||||||    
T  9353250 ctttaaggttcattattgagagagtgggaaacacaaatgggtagaaattagatcttgttcttgtgtaagcttgcaagcttttttcttgtaactctttgta 9353349  T
Q  200 acactttcatcatagtggattggagagctgctct 233  Q
    ||||||||||||||||||||||||||||||||||    
T  9353350 acactttcatcatagtggattggagagctgctct 9353383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 14520509 - 14520276
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatcaaaagtttccttttgttttttct 100  Q
    ||||||||| || |||||||||||||||||||||||||||||||||||  ||||||||||||||||||| |||||||||||| |||||||||| | ||||    
T  14520509 tctttgtagtgaggatctcttgggttgggaaacattgtaaacaccttggatagtgagatttcaccattggaaggatcaaaagcttccttttgtgtcttct 14520410  T
Q  101 ctt-aggattcattattgagagtgtaggtaacacaaatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaactctttgta 199  Q
    ||| ||| ||||| |||||||| || ||||||||||||||||||||||||| | ||| ||||||||||| ||  |||||| |||||||||||||||||||    
T  14520409 ctttagggttcataattgagagagtgggtaacacaaatgggtagaaattaggtcttgttcttgtgtaagcttgcaagctattttcttgtaactctttgta 14520310  T
Q  200 acactttcatcatagtggattggagagctgctct 233  Q
    |||||||||||||||||||||| |||||||||||    
T  14520309 acactttcatcatagtggattgaagagctgctct 14520276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 15464813 - 15464578
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatcaaaagtttccttttgttttttct 100  Q
    ||||||||| || |||||||||||||||||||||| |||||||||||| |||||||||||||||||||| |||||||||||| |||||||||| | ||||    
T  15464813 tctttgtagtgaggatctcttgggttgggaaacatcgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaagcttccttttgtgtcttct 15464714  T
Q  101 c--ttaggattcattattgagagtgtaggtaacacaaatgggtagaaattagatattgctcttgtgtaagtttctaagcta-atttcttgtaactctttg 197  Q
    |  ||||| |||||||||| ||| || || |||||||||||||||||||||| | ||| ||||||||||| ||  ||||||  |||||||||||||||||    
T  15464713 cttttagggttcattattgtgagagtgggaaacacaaatgggtagaaattaggtcttgttcttgtgtaagcttgcaagctatttttcttgtaactctttg 15464614  T
Q  198 taacactttcatcatagtggattggagagctgctct 233  Q
    ||||||||||||||||||||||||||||||||||||    
T  15464613 taacactttcatcatagtggattggagagctgctct 15464578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 22 - 233
Target Start/End: Complemental strand, 10282010 - 10281797
Alignment:
Q  22 gggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatc-aaaagtttccttttgttttttctcttaggattcattattgaga 120  Q
    |||||| |||||||||||||||||||| |||||||||||||||||||| ||||||| ||||| || ||||||| ||||||||||||||||| ||||| ||    
T  10282010 gggttgtgaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaaagctttcttttgtgttttctcttaggattca-tattgtga 10281912  T
Q  121 gtgtaggtaacac-aaatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaactc-tttgtaacactttcatcatagtgga 218  Q
    |||| ||| |||| ||||||||||||||||| | ||| ||||||||||| || ||||||||||||||||||||| |||||||||||||||||||||||||    
T  10281911 gtgtgggtgacacaaaatgggtagaaattaggtcttgttcttgtgtaagcttgtaagctaatttcttgtaactcttttgtaacactttcatcatagtgga 10281812  T
Q  219 ttggagagctgctct 233  Q
    |||||||||||||||    
T  10281811 ttggagagctgctct 10281797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 12083995 - 12084226
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccatt-gaaaggatcaaaagtttccttttgttttttc 99  Q
    ||||| ||| || ||||||||||||||| ||||||| ||||||||||| ||||||||| ||||||||| | |||||| ||||| |||||||||| ||||     
T  12083995 tctttatagtgaggatctcttgggttggtaaacattttaaacaccttgggtagtgagaattcaccatttggaaggat-aaaagcttccttttgtgttttt 12084093  T
Q  100 tcttaggattcattattgagagtgtaggtaacacaaatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaactctttgta 199  Q
    ||||||||||||| |||| ||| || ||| ||||||||||||||||||||| | ||| ||||||||||| || |||| ||||||||||||||||||||||    
T  12084094 tcttaggattcat-attgtgagagtgggtgacacaaatgggtagaaattaggtcttgttcttgtgtaagcttttaagttaatttcttgtaactctttgta 12084192  T
Q  200 acactttcatcatagtggattggagagctgctct 233  Q
    ||||||||||||||||||||||||||||||||||    
T  12084193 acactttcatcatagtggattggagagctgctct 12084226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 36932166 - 36932401
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatcaaaagtttccttttgttttttc- 99  Q
    ||||| ||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| ||||| |||| | |||     
T  36932166 tctttatagtgatgatctcttgggttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaagcttcctcttgtgtcttct 36932265  T
Q  100 -tcttaggattcattattgagagtgtaggtaacacaaatgggtagaaattagatattgctcttgtgtaagtttctaagcta-atttcttgtaactctttg 197  Q
     | ||||| |||||||||||||| || || |||||||||||||||||||||  | ||| |||| |||||  ||  ||||||  |||||||||||||||||    
T  36932266 gttttagggttcattattgagagagtgggaaacacaaatgggtagaaattaagtcttgttcttatgtaaacttgcaagctatttttcttgtaactctttg 36932365  T
Q  198 taacactttcatcatagtggattggagagctgctct 233  Q
    ||||||||||||||||||||||||||||||||||||    
T  36932366 taacactttcatcatagtggattggagagctgctct 36932401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 19589024 - 19588792
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatcaaaagt-ttccttttgttttttc 99  Q
    ||||||||| || |||||||||||||||||||||||||||||| |||| | |||||||||||||||||| ||||||||||| | |||||||||| |||||    
T  19589024 tctttgtagtgaggatctcttgggttgggaaacattgtaaacatcttgggcagtgagatttcaccattggaaggatcaaaaatcttccttttgtgttttc 19588925  T
Q  100 tcttaggattcattattgagagtgtaggtaacac-aaatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaactc-tttg 197  Q
    |||||||||||   ||||||| ||| ||| |||| ||| ||||||||||||| | ||| ||||||||||| || |||| |||||||||||||||| ||||    
T  19588924 tcttaggattc---attgagattgtgggtgacacaaaaagggtagaaattaggtcttgttcttgtgtaagcttataaggtaatttcttgtaactcttttg 19588828  T
Q  198 taacactttcatcatagtggattggagagctgctct 233  Q
    ||||||||||||||||||||||||||| ||||||||    
T  19588827 taacactttcatcatagtggattggagggctgctct 19588792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 11916790 - 11917023
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatcaaaagtttccttttgttttttct 100  Q
    ||||||||| || ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||  |||||||||| ||||||    
T  11916790 tctttgtagtgaggatctcttgggttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaaacttccttttgtgttttct 11916889  T
Q  101 cttaggattcat-tattgagagtgtaggtaacac-aaatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaactc-tttg 197  Q
    |||||| |||||   |||||||||  ||| |||| ||||||||||||||||| | ||| ||||||||||| ||  || ||| ||||||||||||| ||||    
T  11916890 cttagggttcatcgtttgagagtg--ggtgacacaaaatgggtagaaattaggtcttgttcttgtgtaagcttgcaaactattttcttgtaactcttttg 11916987  T
Q  198 taacactttcatcatagtggattggagagctgctct 233  Q
    |||||||||||| |||||||||||||||||||||||    
T  11916988 taacactttcattatagtggattggagagctgctct 11917023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 22 - 233
Target Start/End: Complemental strand, 3880558 - 3880345
Alignment:
Q  22 gggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatcaaaa-gtttccttttgttttttctcttaggattcattattgaga 120  Q
    |||||| |||||||||||||||| ||| || ||||||||||||||||| ||||||||||| | |||||||||||||||||| |||||||||| |||| ||    
T  3880558 gggttgagaaacattgtaaacacattgggttgtgagatttcaccattggaaggatcaaaaagcttccttttgttttttctcctaggattcat-attgtga 3880460  T
Q  121 gtgtaggtaacacaaa-tgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaactcttt-gtaacactttcatcatagtgga 218  Q
    | || ||| ||||||| |||||||||||||| | ||| ||||||||||| || ||| |||||||||||||||||||| ||||||||||||||||||||||    
T  3880459 gagtgggtgacacaaaatgggtagaaattaggtcttgttcttgtgtaagcttgtaaactaatttcttgtaactcttttgtaacactttcatcatagtgga 3880360  T
Q  219 ttggagagctgctct 233  Q
    |||||||||||||||    
T  3880359 ttggagagctgctct 3880345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 28832536 - 28832305
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatc-aaaagtttccttttgttttttc 99  Q
    ||||||||| || | ||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| ||||| |||||||||| |||||    
T  28832536 tctttgtagtgaggttctcttgggttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaaagcttccttttgtgttttc 28832437  T
Q  100 tcttaggattcattattgagagtgtagg---taacacaaatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaactcttt 196  Q
    |||||||||||   ||||||||||| ||   ||  | ||||||||||||||||||  ||| |||| ||||   || ||||||||||||||||||||| ||    
T  28832436 tcttaggattc---attgagagtgtgggtgatatgaaaaatgggtagaaattagaacttgttcttttgta--cttataagctaatttcttgtaactcatt 28832342  T
Q  197 gtaacactttcatcatagtggattggagagctgctct 233  Q
    |||||||||||||| ||||||||||||| ||||||||    
T  28832341 gtaacactttcatcttagtggattggagggctgctct 28832305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 17003777 - 17004011
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatc-aaaagtttccttttgttttttc 99  Q
    ||||||||| || | ||||||||||| ||||||||||||||||||||| |||||||||||||||||||| ||||||| ||||| |||||||||| |||||    
T  17003777 tctttgtagtgaggttctcttgggtttggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaaagcttccttttgtgttttc 17003876  T
Q  100 tcttaggattcat-tattgagagtgtaggtaacacaaatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaactc-tttg 197  Q
    ||||||||||||| |  |||||||| ||  ||   ||||||||||||||||| | ||| ||||||||||| || |||| |||||| ||||||||| ||||    
T  17003877 tcttaggattcatattgtgagagtg-agtgaaattaaatgggtagaaattaggtcttgttcttgtgtaagcttgtaagttaattttttgtaactcttttg 17003975  T
Q  198 taacactttcatcatagtggattggagagctgctct 233  Q
     || |||||||||||||||||||| |||||||||||    
T  17003976 aaatactttcatcatagtggattgaagagctgctct 17004011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 38219681 - 38219444
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaa--cattgtaaacaccttgcgtagtgagatttcaccattgaaaggatcaaaagtttccttttgtttttt 98  Q
    ||||||||| || |||||||||||||||||||  |||||||||||||||| |||||||||||||||||||| ||||||| |||| ||||| |||| | ||    
T  38219681 tctttgtagtgaggatctcttgggttgggaaaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatctaaagcttcctcttgtgtctt 38219582  T
Q  99 ctctt--aggattcattat-tgagagtgtaggtaacacaaatgggtagaaattagatattgctcttgtgtaagtttctaagctaattt-cttgtaactct 194  Q
    |||||  ||| |||||  | ||||||||  || |||||||||||||||||| |||   ||| ||||||||||| ||  |||||| ||| |||||||| ||    
T  38219581 ctcttttagggttcatattgtgagagtgg-ggaaacacaaatgggtagaaactaggacttgttcttgtgtaagcttgcaagctatttttcttgtaaccct 38219483  T
Q  195 ttgtaacactttcatcatagtggattggagagctgctct 233  Q
    |||||||||||||||||||||||||||||||||||||||    
T  38219482 ttgtaacactttcatcatagtggattggagagctgctct 38219444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 11181650 - 11181883
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatc-aaaagtttccttttgttttttc 99  Q
    ||||||||| || | ||||||||||||||||||||||||||||||||| ||||||| |||||||||||| ||||||| ||||| |||||||||| |||||    
T  11181650 tctttgtagtgaggttctcttgggttgggaaacattgtaaacaccttgggtagtgaaatttcaccattggaaggatcaaaaagcttccttttgtgttttc 11181749  T
Q  100 tcttaggattcattattgagagtgtaggtaaca--caaatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaactc-ttt 196  Q
    |||||||||||   |||| |||||| ||| |||   ||||||||||||||||| | ||| || | ||  || || || |||||||||||||||||| |||    
T  11181750 tcttaggattc---attgtgagtgtgggtgacatgaaaatgggtagaaattaggtcttgttcatttgagagcttttaggctaatttcttgtaactcattt 11181846  T
Q  197 gtaacactttcatcatagtggattggagagctgctct 233  Q
    ||| |||||||||| ||||||||||||| | ||||||    
T  11181847 gtatcactttcatcttagtggattggagggttgctct 11181883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 31300413 - 31300640
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatcaaaa-gtttccttttgttttttc 99  Q
    ||||||||| || | |||||||||||| |||||||||||||||||||| |||||||||||||||||||| ||||||||||| | |||||||||| |||||    
T  31300413 tctttgtagtgaggttctcttgggttgagaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaaggcttccttttgtgttttc 31300512  T
Q  100 tcttaggattcattattgagagtgtagg---taacacaaatgggtagaaattagatattgctcttgtgtaagtttctaagcta-atttcttgtaactctt 195  Q
    |||||||||||   ||||||||||| ||   ||  | |||||||||||||||||   ||| ||||||||||| ||  || |||  ||||||| ||||| |    
T  31300513 tcttaggattc---attgagagtgtgggtgatatgagaaatgggtagaaattaggacttgttcttgtgtaagcttgcaaactatttttcttgcaactcat 31300609  T
Q  196 tgtaacactttcatcatagtggattggagag 226  Q
    | ||||||||||||| |||||||||||||||    
T  31300610 tataacactttcatcttagtggattggagag 31300640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 39 - 233
Target Start/End: Original strand, 42127266 - 42127461
Alignment:
Q  39 aaacaccttgcgtagtgagatttcaccattgaaaggatcaaaa-gtttccttttgttttttctcttaggattcattattgagagtgtaggtaacac---a 134  Q
    |||||||||| |||||||||||||||||||| ||||||||||| | || ||||||| |||||||||||||||||||   |||||||| ||| | |    |    
T  42127266 aaacaccttgggtagtgagatttcaccattggaaggatcaaaaagctttcttttgtgttttctcttaggattcatt---gagagtgtgggtgatatgaaa 42127362  T
Q  135 aatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaactctttgtaacactttcatcatagtggattggagagctgctct 233  Q
    |||||||||||| |||   ||| |||| |||||| || ||||||||||||||||||||| |||||||||||||||| ||||||||||| | ||||||||    
T  42127363 aatgggtagaaagtaggacttgttcttttgtaagcttataagctaatttcttgtaactcattgtaacactttcatcttagtggattggggggctgctct 42127461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 35387945 - 35387708
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaa--cattgtaaacaccttgcgtagtgagatttcaccattgaaaggatcaaaagtttccttttgtttttt 98  Q
    |||||||||||| | ||||||||||||| |||  |||||||| ||||||| |||||||||||||||||||| ||||||| |||  ||||| | || | ||    
T  35387945 tctttgtagagagggtctcttgggttggaaaaaacattgtaatcaccttgggtagtgagatttcaccattggaaggatctaaaacttcctctagtgtctt 35387846  T
Q  99 ctctt--aggattcattat-tgagagtgtaggtaacacaaatgggtagaaattagatattgctcttgtgtaagtttctaagctaattt-cttgtaactct 194  Q
    |||||  ||| |||||  | ||||||||  || |||||||||||||||||| |||   ||  ||||||||||| ||  |||||| ||| |||||||| ||    
T  35387845 ctcttttagggttcatattgtgagagtgg-ggaaacacaaatgggtagaaactaggacttattcttgtgtaagcttgcaagctatttttcttgtaaccct 35387747  T
Q  195 ttgtaacactttcatcatagtggattggagagctgctct 233  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  35387746 ttgtaacactttcatcatagtagattggagagctgctct 35387708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 24553345 - 24553459
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatc-aaaagtttccttttgttttttc 99  Q
    ||||||||| || | ||||||||||||||||||||||||||||||||| |||||||||||||||||||  ||||||| ||||| |||||||||| |||||    
T  24553345 tctttgtagtgaggttctcttgggttgggaaacattgtaaacaccttgggtagtgagatttcaccattagaaggatcaaaaagcttccttttgtgttttc 24553444  T
Q  100 tcttaggattcatta 114  Q
    |||||| ||||||||    
T  24553445 tcttagaattcatta 24553459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 129 - 233
Target Start/End: Complemental strand, 38192324 - 38192219
Alignment:
Q  129 aacacaaatgggtagaaattagatattgctcttgtgtaagtttctaagctaattt-cttgtaactctttgtaacactttcatcatagtggattggagagc 227  Q
    |||||||||||||||||| |||   ||| ||||||||||| ||  |||||| ||| |||||||| |||||||||||||||||||||||||||||||||||    
T  38192324 aacacaaatgggtagaaactaggacttgttcttgtgtaagcttgcaagctatttttcttgtaaccctttgtaacactttcatcatagtggattggagagc 38192225  T
Q  228 tgctct 233  Q
    ||||||    
T  38192224 tgctct 38192219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 42127188 - 42127268
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatcaaaa 81  Q
    ||||||||| || | |||||||||||| ||||||||||| |||||||| |||||||||||||||||||| |||||||||||    
T  42127188 tctttgtagtgaggttctcttgggttgagaaacattgtatacaccttgggtagtgagatttcaccattggaaggatcaaaa 42127268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 7160722 - 7160835
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatc-aaaagtttccttttgttttttc 99  Q
    ||||||||| || | |||||||| |||||||||||||||| |||||||   |||||||||||| ||||| ||||||| ||||| ||| |||| | |||||    
T  7160722 tctttgtagtgaggttctcttggattgggaaacattgtaatcaccttggacagtgagatttcatcattggaaggatcaaaaagcttcattttatgttttc 7160821  T
Q  100 tcttaggattcatt 113  Q
    ||||||||||||||    
T  7160822 tcttaggattcatt 7160835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 51 - 231
Target Start/End: Complemental strand, 2630460 - 2630279
Alignment:
Q  51 tagtgagatttcaccattgaaaggatc-aaaagtttccttttgttttttctcttaggattcattattgagagtgtaggtaac---acaaatgggtagaaa 146  Q
    |||||| |||||||||||||||||||| ||||| ||||||| || ||||||||||||||||   |||| |||||  ||| ||   | |||||  || |||    
T  2630460 tagtgaaatttcaccattgaaaggatcaaaaagcttcctttagtgttttctcttaggattc---attgtgagtgagggtgacttgaaaaatgtataaaaa 2630364  T
Q  147 ttagatattgctcttgtgtaagtttctaagctaatttcttgtaactc-tttgtaacactttcatcatagtggattggagagctgct 231  Q
    |||| | ||| |||| |||  |||| ||||||||||| ||||||| | |||||| ||||||||||||||||||||| |||||||||    
T  2630363 ttaggttttgttctt-tgtgtgtttttaagctaatttattgtaacccttttgtatcactttcatcatagtggattgaagagctgct 2630279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 54 - 233
Target Start/End: Complemental strand, 6742076 - 6741898
Alignment:
Q  54 tgagatttcaccattgaaaggatcaaaa-gtttccttttgttttttctcttaggattcattattgagagtgtaggtaac---acaaatgggtagaaatta 149  Q
    |||||||||||||||||||| ||||||| | |||  | ||||||||||  |||||||||||   |||||||| ||| ||   | ||||| ||||||||||    
T  6742076 tgagatttcaccattgaaagaatcaaaaagattctctgtgttttttct--taggattcatt---gagagtgtgggtgacttgaaaaatgagtagaaatta 6741982  T
Q  150 gatattgctcttgtgtaagtttctaagctaatttcttgtaact-ctttgtaacactttcatcatagtggattggagagctgctct 233  Q
    | | ||| |||| ||| |||||  ||||||||||||||||||| ||||||| ||||| |||| || |||||||||||||||||||    
T  6741981 ggttttgttctt-tgtgagtttgcaagctaatttcttgtaacttctttgtatcacttccatcttaatggattggagagctgctct 6741898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 16 - 233
Target Start/End: Complemental strand, 24136117 - 24135894
Alignment:
Q  16 tctcttgggttgggaaa--cattgtaaacaccttgcgtagtgag-atttcaccattgaaaggatcaaaagtttccttttgttttttctctt--aggattc 110  Q
    |||||||||||||||||  |||||||| ||||||| |||||||| | |||||||||| ||||||| |||| ||||| | || | |||||||  ||| |||    
T  24136117 tctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcaccattggaaggatctaaagcttcctctagtgtcttctcttttagggttc 24136018  T
Q  111 attat-tgagagtgtaggtaacacaaatgggtagaaattagatattgctcttgtgtaagtttctaagctaattt-cttgtaactctttgtaacactttca 208  Q
    |   | ||||||||  || ||||| || ||||||||  |||   ||| ||||||||||| ||  |||||| ||| |||||||| ||||||||||||||||    
T  24136017 acattgtgagagtgg-ggaaacaccaaagggtagaatctaggacttgttcttgtgtaagcttgcaagctatttttcttgtaaccctttgtaacactttca 24135919  T
Q  209 tcatagtggattggagagctgctct 233  Q
    || ||||| |||||| |||||||||    
T  24135918 tcttagtgcattggatagctgctct 24135894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 16 - 233
Target Start/End: Original strand, 33030771 - 33030991
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatcaaaagtttccttt--tgttt---tttctcttaggattc 110  Q
    |||||||||||| |||| ||||||| || |||| ||||||||||||||||||||  || |  ||||| |||||||  |||||   |||||||||||||||    
T  33030771 tctcttgggttgagaaatattgtaatcatcttgggtagtgagatttcaccattg--agaacaaaaagcttcctttagtgttttaatttctcttaggattc 33030868  T
Q  111 attattgagagtgtaggtaac---acaaatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaa-ctctttgtaacacttt 206  Q
       |||||||||||  || ||   | ||||||||||||||||  | ||| |||| ||| || || |||||||||||||||||| | | ||| | ||||||    
T  33030869 ---attgagagtgtgagtgacttgaaaaatgggtagaaattatgttttgttctt-tgtgagcttttaagctaatttcttgtaaccccattgcatcacttt 33030964  T
Q  207 catcatagtggattggagagctgctct 233  Q
    |||| ||||| ||||||||||||||||    
T  33030965 catcttagtgaattggagagctgctct 33030991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 174 - 233
Target Start/End: Original strand, 24553499 - 24553557
Alignment:
Q  174 aagctaatttcttgtaactctttgtaacactttcatcatagtggattggagagctgctct 233  Q
    |||||||||||||||||||| |||||||||||||||| ||||||| ||||| ||||||||    
T  24553499 aagctaatttcttgtaactcattgtaacactttcatcttagtggagtggag-gctgctct 24553557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 181 - 233
Target Start/End: Complemental strand, 30631503 - 30631452
Alignment:
Q  181 tttcttgtaactctttgtaacactttcatcatagtggattggagagctgctct 233  Q
    ||||||||||| ||||||||||||||| ||||| |||||||||||||||||||    
T  30631503 tttcttgtaaccctttgtaacactttc-tcatattggattggagagctgctct 30631452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 181 - 233
Target Start/End: Complemental strand, 31180311 - 31180260
Alignment:
Q  181 tttcttgtaactctttgtaacactttcatcatagtggattggagagctgctct 233  Q
    ||||||||||| ||||||||||||||| ||||| |||||||||||||||||||    
T  31180311 tttcttgtaaccctttgtaacactttc-tcatattggattggagagctgctct 31180260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 48
Target Start/End: Original strand, 533705 - 533737
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    |||||||||||||||||||||||||||||||||    
T  533705 tctcttgggttgggaaacattgtaaacaccttg 533737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 48
Target Start/End: Complemental strand, 5887648 - 5887616
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    |||||||||||||||||||||||||||||||||    
T  5887648 tctcttgggttgggaaacattgtaaacaccttg 5887616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 48
Target Start/End: Original strand, 13239688 - 13239720
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    |||||||||||||||||||||||||||||||||    
T  13239688 tctcttgggttgggaaacattgtaaacaccttg 13239720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 48
Target Start/End: Original strand, 13342997 - 13343029
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    |||||||||||||||||||||||||||||||||    
T  13342997 tctcttgggttgggaaacattgtaaacaccttg 13343029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 48
Target Start/End: Original strand, 19806320 - 19806352
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    |||||||||||||||||||||||||||||||||    
T  19806320 tctcttgggttgggaaacattgtaaacaccttg 19806352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 48
Target Start/End: Original strand, 25412698 - 25412730
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    |||||||||||||||||||||||||||||||||    
T  25412698 tctcttgggttgggaaacattgtaaacaccttg 25412730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 48
Target Start/End: Complemental strand, 36074276 - 36074244
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    |||||||||||||||||||||||||||||||||    
T  36074276 tctcttgggttgggaaacattgtaaacaccttg 36074244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 48
Target Start/End: Complemental strand, 39468781 - 39468749
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    |||||||||||||||||||||||||||||||||    
T  39468781 tctcttgggttgggaaacattgtaaacaccttg 39468749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 182 - 233
Target Start/End: Original strand, 1457151 - 1457201
Alignment:
Q  182 ttcttgtaactctttgtaacactttcatcatagtggattggagagctgctct 233  Q
    ||||||||||  |||||||||||||| ||||| |||||||||||||||||||    
T  1457151 ttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctct 1457201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 16 - 47
Target Start/End: Complemental strand, 3075890 - 3075859
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacacctt 47  Q
    ||||||||||||||||||||||||||||||||    
T  3075890 tctcttgggttgggaaacattgtaaacacctt 3075859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 27445066 - 27445016
Alignment:
Q  182 ttcttgtaactctttgtaacactttcatcatagtggattggagagctgctct 233  Q
    ||||||||||  |||||||||||||| ||||| |||||||||||||||||||    
T  27445066 ttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctct 27445016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 27449910 - 27449860
Alignment:
Q  182 ttcttgtaactctttgtaacactttcatcatagtggattggagagctgctct 233  Q
    ||||||||||  |||||||||||||| ||||| |||||||||||||||||||    
T  27449910 ttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctct 27449860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 16 - 47
Target Start/End: Original strand, 31182909 - 31182940
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacacctt 47  Q
    ||||||||||||||||||||||||||||||||    
T  31182909 tctcttgggttgggaaacattgtaaacacctt 31182940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 43592375 - 43592325
Alignment:
Q  182 ttcttgtaactctttgtaacactttcatcatagtggattggagagctgctct 233  Q
    ||||||||||  |||||||||||||| ||||| |||||||||||||||||||    
T  43592375 ttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctct 43592325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 43598820 - 43598770
Alignment:
Q  182 ttcttgtaactctttgtaacactttcatcatagtggattggagagctgctct 233  Q
    ||||||||||  |||||||||||||| ||||| |||||||||||||||||||    
T  43598820 ttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctct 43598770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 43604312 - 43604262
Alignment:
Q  182 ttcttgtaactctttgtaacactttcatcatagtggattggagagctgctct 233  Q
    ||||||||||  |||||||||||||| ||||| |||||||||||||||||||    
T  43604312 ttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctct 43604262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 43609804 - 43609754
Alignment:
Q  182 ttcttgtaactctttgtaacactttcatcatagtggattggagagctgctct 233  Q
    ||||||||||  |||||||||||||| ||||| |||||||||||||||||||    
T  43609804 ttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctct 43609754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 233
Target Start/End: Complemental strand, 15044781 - 15044732
Alignment:
Q  183 tcttgtaactctttgtaacactttcatcatagtggattggagagctgctct 233  Q
    |||||||||  |||||||||||||| ||||| |||||||||||||||||||    
T  15044781 tcttgtaaccttttgtaacactttc-tcatattggattggagagctgctct 15044732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 233
Target Start/End: Original strand, 31396972 - 31397032
Alignment:
Q  173 taagctaatttcttgtaactcttt-gtaacactttcatcatagtggattggagagctgctct 233  Q
    |||||||  ||||||||||||||| ||||||| |||| |||| |||||||||||||||||||    
T  31396972 taagctagattcttgtaactcttttgtaacacattca-catattggattggagagctgctct 31397032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 233
Target Start/End: Original strand, 31401829 - 31401889
Alignment:
Q  173 taagctaatttcttgtaactcttt-gtaacactttcatcatagtggattggagagctgctct 233  Q
    |||||||  ||||||||||||||| ||||||| |||| |||| |||||||||||||||||||    
T  31401829 taagctagattcttgtaactcttttgtaacacattca-catattggattggagagctgctct 31401889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 234
Target Start/End: Complemental strand, 33791413 - 33791361
Alignment:
Q  182 ttcttgtaactcttt-gtaacactttcatcatagtggattggagagctgctctt 234  Q
    ||||||||||||||| ||||||| |||| |||| ||||||||||||||||||||    
T  33791413 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctt 33791361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 233
Target Start/End: Original strand, 37556613 - 37556661
Alignment:
Q  184 cttgtaactctttgtaacactttcatcatagtggattggagagctgctct 233  Q
    ||||||||  ||||||||||||||| |||| |||||||||||||||||||    
T  37556613 cttgtaaccttttgtaacactttca-catattggattggagagctgctct 37556661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 233
Target Start/End: Original strand, 37561435 - 37561483
Alignment:
Q  184 cttgtaactctttgtaacactttcatcatagtggattggagagctgctct 233  Q
    ||||||||  ||||||||||||||| |||| |||||||||||||||||||    
T  37561435 cttgtaaccttttgtaacactttca-catattggattggagagctgctct 37561483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 2785472 - 2785421
Alignment:
Q  182 ttcttgtaactcttt-gtaacactttcatcatagtggattggagagctgctct 233  Q
    ||||||||||||||| ||||||| |||| |||| |||||||||||||||||||    
T  2785472 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctct 2785421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 48
Target Start/End: Complemental strand, 8566178 - 8566146
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    ||||||||||| |||||||||||||||||||||    
T  8566178 tctcttgggttcggaaacattgtaaacaccttg 8566146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 48
Target Start/End: Original strand, 13488139 - 13488171
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    ||||||||||||| |||||||||||||||||||    
T  13488139 tctcttgggttggaaaacattgtaaacaccttg 13488171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 48
Target Start/End: Original strand, 16409419 - 16409451
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    |||||||||||||||||||| ||||||||||||    
T  16409419 tctcttgggttgggaaacatggtaaacaccttg 16409451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 48
Target Start/End: Original strand, 16452017 - 16452049
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    ||||||||||| |||||||||||||||||||||    
T  16452017 tctcttgggttcggaaacattgtaaacaccttg 16452049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 48
Target Start/End: Original strand, 26170718 - 26170750
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    |||||||||||||||||||| ||||||||||||    
T  26170718 tctcttgggttgggaaacatggtaaacaccttg 26170750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 48
Target Start/End: Original strand, 26177827 - 26177859
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    |||||||||||||||||||| ||||||||||||    
T  26177827 tctcttgggttgggaaacatggtaaacaccttg 26177859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 48
Target Start/End: Complemental strand, 28750887 - 28750855
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    |||||||||||||||||||||| ||||||||||    
T  28750887 tctcttgggttgggaaacattgaaaacaccttg 28750855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 48
Target Start/End: Original strand, 30182525 - 30182557
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    |||||||||||||||||||||| ||||||||||    
T  30182525 tctcttgggttgggaaacattgcaaacaccttg 30182557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 48
Target Start/End: Complemental strand, 30683152 - 30683120
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    |||||||||||| ||||||||||||||||||||    
T  30683152 tctcttgggttgcgaaacattgtaaacaccttg 30683120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 33768276 - 33768225
Alignment:
Q  182 ttcttgtaactcttt-gtaacactttcatcatagtggattggagagctgctct 233  Q
    ||||||||||||||| ||||||| |||| |||| |||||||||||||||||||    
T  33768276 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctct 33768225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 48
Target Start/End: Original strand, 33831616 - 33831648
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    ||||||||||||| |||||||||||||||||||    
T  33831616 tctcttgggttggaaaacattgtaaacaccttg 33831648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 44
Target Start/End: Original strand, 37439070 - 37439098
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacac 44  Q
    |||||||||||||||||||||||||||||    
T  37439070 tctcttgggttgggaaacattgtaaacac 37439098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 48
Target Start/End: Complemental strand, 42428662 - 42428630
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    ||||||||||||||||| |||||||||||||||    
T  42428662 tctcttgggttgggaaatattgtaaacaccttg 42428630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 48
Target Start/End: Original strand, 42926829 - 42926861
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    |||||||| ||||||||||||||||||||||||    
T  42926829 tctcttggattgggaaacattgtaaacaccttg 42926861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 147; Significance: 2e-77; HSPs: 3)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 133097 - 133331
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatcaaaagtttccttttgttttttct 100  Q
    ||||||||| || ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| |||||||||| | ||||    
T  133097 tctttgtagtgaggatctcttgggttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaagcttccttttgtgtcttct 133196  T
Q  101 c-ttaggattcattattgagagtgtaggtaacacaaatgggtagaaattagatattgctcttgtgtaagtttctaagcta-atttcttgtaactctttgt 198  Q
    | ||||| |||||||||||||| || || |||||||||||||||||||||| | ||| ||||||||||||||  ||||||  ||||||||||||||||||    
T  133197 ctttagggttcattattgagagagtgggaaacacaaatgggtagaaattaggtcttgttcttgtgtaagtttgcaagctatttttcttgtaactctttgt 133296  T
Q  199 aacactttcatcatagtggattggagagctgctct 233  Q
    |||| ||||||||||||||||||||||||||||||    
T  133297 aacattttcatcatagtggattggagagctgctct 133331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 2773 - 2540
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatc-aaaagtttccttttgttttttc 99  Q
    ||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| |||||||||| ||||     
T  2773 tctttgtagtgaggatctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattggaaggatcaaaaagcttccttttgtgtttta 2674  T
Q  100 tcttaggattcattattgagagtgtaggtaacac-aaatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaactc-tttg 197  Q
    ||||||||||||| ||||||||||| ||| |||| ||||||||||||||||| | ||| ||||||||||| || |||||||||||||| ||| || ||||    
T  2673 tcttaggattcatcattgagagtgtgggtgacacaaaatgggtagaaattagttcttgttcttgtgtaagcttataagctaatttcttataattcttttg 2574  T
Q  198 taacactttcatcatagtggattggagagctgct 231  Q
    ||||||||||||||||||||||||||| ||||||    
T  2573 taacactttcatcatagtggattggagggctgct 2540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #3
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 5964 - 5729
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatc-aaaagtttccttttgttttttc 99  Q
    ||||||||| || ||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| ||||||| ||||| |||||||||| |||||    
T  5964 tctttgtagtgaggatctcttgggttggcaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaaagcttccttttgtgttttc 5865  T
Q  100 tcttaggattcattattgagagtgtaggtaacac-aaatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaactc-tttg 197  Q
    ||||||||||||| ||||||||||| ||| |||| ||||| ||||||||||  | ||| ||||||||||| || ||||||||||||||||| ||| ||||    
T  5864 tcttaggattcatcattgagagtgtgggtgacacaaaatgagtagaaattaagtcttgttcttgtgtaagcttataagctaatttcttgtatctcttttg 5765  T
Q  198 taacactttcatcatagtggattggagagctgctct 233  Q
    |||||||||||||||||||||||| || ||||||||    
T  5764 taacactttcatcatagtggattgaagggctgctct 5729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 138; Significance: 4e-72; HSPs: 2)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 43779 - 44012
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatcaaaagtttccttttgttttttct 100  Q
    ||||||||| || ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| |||||||||| | ||||    
T  43779 tctttgtagtgaggatcttttgggttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaagcttccttttgtgtcttct 43878  T
Q  101 ctt-aggattcattattgagagtgtaggtaacacaaatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaactctttgta 199  Q
    ||| ||| |||||||||||||| |   | |||||||||||||||||||||| | ||| |||||| |||| ||  |||||| |||||||||||||||||||    
T  43879 ctttagggttcattattgagagagagtggaacacaaatgggtagaaattaggtcttgttcttgtataagcttgcaagctattttcttgtaactctttgta 43978  T
Q  200 acactttcatcatagtggattggagagctgctct 233  Q
    ||||||||||||||||||||||||||||||||||    
T  43979 acactttcatcatagtggattggagagctgctct 44012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087; HSP #2
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 36650 - 36883
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatcaaaagtttccttttgttttttct 100  Q
    ||||||||| || ||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| |||||||||||| |||||||||| | ||||    
T  36650 tctttgtagtgaggatctcttgggttggaaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaagcttccttttgtgtcttct 36749  T
Q  101 ctt-aggattcattattgagagtgtaggtaacacaaatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaactctttgta 199  Q
    ||| ||| |||||||||||||| || || ||||||||||||||||||| |  | ||| ||||||||||| ||  |||||| |||||||||||||||||||    
T  36750 ctttagggttcattattgagagagtgggaaacacaaatgggtagaaatcatgtcttgttcttgtgtaagcttgcaagctattttcttgtaactctttgta 36849  T
Q  200 acactttcatcatagtggattggagagctgctct 233  Q
    |||||||||||||||||| |||| ||||||||||    
T  36850 acactttcatcatagtgggttggcgagctgctct 36883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 136; Significance: 6e-71; HSPs: 41)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 31086292 - 31086524
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatcaaaagtttccttttgttttttct 100  Q
    ||||||||| || |||||||| ||||| |||||||||||||||||||| || ||||||||||||||||| |||||||||||| ||| |||| | ||||||    
T  31086292 tctttgtagtgaggatctcttaggttgagaaacattgtaaacaccttgggttgtgagatttcaccattggaaggatcaaaagcttctttttatgttttct 31086391  T
Q  101 cttaggattcattattgagagtgtaggtaacac-aaatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaact-ctttgt 198  Q
    ||||||||||||||||  |||||| ||| |||| ||||||||||||||||| | ||||||||||||||| || |||||||||||||||||||| ||||||    
T  31086392 cttaggattcattatt--gagtgtgggtgacacaaaatgggtagaaattaggtcttgctcttgtgtaagcttataagctaatttcttgtaactcctttgt 31086489  T
Q  199 aacactttcatcatagtggattggagagctgctct 233  Q
    |||||||||||||||||||||||||||| ||||||    
T  31086490 aacactttcatcatagtggattggagagttgctct 31086524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 25 - 233
Target Start/End: Complemental strand, 18233101 - 18232891
Alignment:
Q  25 ttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatcaaaagtttccttttgttttttctcttaggattcattattgagagtgt 124  Q
    |||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| |||||||||| ||||||||||||||||||||||||||||||    
T  18233101 ttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaagcttccttttgtgttttctcttaggattcattattgagagtgt 18233002  T
Q  125 aggtaacac-aaatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaactc-tttgtaacactttcatcatagtggattgg 222  Q
     ||| |||| ||||||||||||||||| | ||| ||||||||||| || |||||| |||||||||||||| ||||||||||||||||||||||| |||||    
T  18233001 gggtgacacaaaatgggtagaaattaggtcttgttcttgtgtaagcttataagctgatttcttgtaactcttttgtaacactttcatcatagtgaattgg 18232902  T
Q  223 agagctgctct 233  Q
    || | ||||||    
T  18232901 agggttgctct 18232891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 5572061 - 5572292
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatcaaaagtttccttttgttttttct 100  Q
    ||||||||| |  ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||| || ||||||||| |||||||||| ||||||    
T  5572061 tctttgtagtggggatctcttgggttgggaaacattgtaaacaccttgggtagtgagatttcactattggaatgatcaaaagcttccttttgtgttttct 5572160  T
Q  101 cttaggattcattattgagagtgtaggtaacac-aaatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaactc-tttgt 198  Q
    ||||||||||   ||||||||||| ||| |||| ||||| ||||||||||| | ||| ||||||||||| || ||||||||||||||||||||| |||||    
T  5572161 cttaggattc---attgagagtgtgggtgacacaaaatgcgtagaaattaggtcttgttcttgtgtaagcttataagctaatttcttgtaactcttttgt 5572257  T
Q  199 aacactttcatcatagtggattggagagctgctct 233  Q
    |||||||||||||||||||||||||| ||||||||    
T  5572258 aacactttcatcatagtggattggagggctgctct 5572292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 14 - 233
Target Start/End: Original strand, 5757309 - 5757529
Alignment:
Q  14 gatctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatcaaaagtttccttttgttttttctctt-aggattcat 112  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| ||||||  || | ||||||| ||| |||||    
T  5757309 gatctcttgggttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaagcttccttccgtgtcttctctttagggttcat 5757408  T
Q  113 tattgagagtgtaggtaacacaaatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaactctttgtaacactttcatcat 212  Q
    ||||||||| |   | |||||||||||||||||||||| | ||| |||||| |||| ||  |||||| ||||||||||||||||||||||||||||||||    
T  5757409 tattgagagagagtggaacacaaatgggtagaaattaggtcttgttcttgtataagcttgcaagctattttcttgtaactctttgtaacactttcatcat 5757508  T
Q  213 agtggattggagagctgctct 233  Q
    |||||||||||||||||||||    
T  5757509 agtggattggagagctgctct 5757529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 22963978 - 22963745
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatcaaaagtttccttttgttttttct 100  Q
    ||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| ||||| ||||| ||||||    
T  22963978 tctttgtagtgaagatctcttggattgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaaatttccctttgtgttttct 22963879  T
Q  101 cttaggattcattattgagagtgtaggtaac-acaaatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaactc-tttgt 198  Q
     |||||||||||||||||||||||  || || | ||||||||||||||||    ||| | ||||||||| || ||||||||||||||||||||| |||||    
T  22963878 tttaggattcattattgagagtgtgagtgacaaaaaatgggtagaaattacggcttg-ttttgtgtaaggttataagctaatttcttgtaactcttttgt 22963780  T
Q  199 aacactttcatcatagtggattggagagctgctct 233  Q
    |||||||||||||||||||||||||| ||||||||    
T  22963779 aacactttcatcatagtggattggagggctgctct 22963745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 23824415 - 23824648
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatcaaaagtttccttttgttttttct 100  Q
    ||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| ||||| ||||| ||||||    
T  23824415 tctttgtagtgaagatctcttggattgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaaatttccctttgtgttttct 23824514  T
Q  101 cttaggattcattattgagagtgtaggtaac-acaaatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaactc-tttgt 198  Q
     |||||||||||||||||||||||  || || | ||||||||||||||||    ||| | ||||||||| || ||||||||||||||||||||| |||||    
T  23824515 tttaggattcattattgagagtgtgagtgacaaaaaatgggtagaaattacggcttg-ttttgtgtaaggttataagctaatttcttgtaactcttttgt 23824613  T
Q  199 aacactttcatcatagtggattggagagctgctct 233  Q
    |||||||||||||||||||||||||| ||||||||    
T  23824614 aacactttcatcatagtggattggagggctgctct 23824648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 21356316 - 21356082
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatcaaaagtttccttttgttttttct 100  Q
    ||||||||| || ||||||||||||| ||||||||||||||||||||| |||||||||||||| ||||| ||| |||||||| |||||||||| | || |    
T  21356316 tctttgtagtgaggatctcttgggttaggaaacattgtaaacaccttgggtagtgagatttcatcattggaagaatcaaaagcttccttttgtgtctttt 21356217  T
Q  101 c-ttaggattcattattgagagtgtaggtaacacaaatgggtagaaattagatattgctcttgtgtaagtttctaagcta-atttcttgtaactctttgt 198  Q
    | ||||| |||||||||||||| ||  | |||||||||||||||||||||| | ||| ||||||||||| ||  ||| ||  ||||||||||||||| ||    
T  21356216 ctttagggttcattattgagagagtgagaaacacaaatgggtagaaattaggtcttgttcttgtgtaagcttgcaagttatttttcttgtaactcttagt 21356117  T
Q  199 aacactttcatcatagtggattggagagctgctct 233  Q
    |||||||||||||||||||||||||||||||||||    
T  21356116 aacactttcatcatagtggattggagagctgctct 21356082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 31979791 - 31979559
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatcaaaagtttccttttgttttttct 100  Q
    ||||||||| || | ||| |||||||| |||||||||||||||||||| |||||||||||||||||||| |||||||||||| |||||||||| ||||||    
T  31979791 tctttgtagtgaggttcttttgggttgagaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaagcttccttttgtgttttct 31979692  T
Q  101 cttaggattcattattgagagtgtaggtaacac--aaatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaactc-tttg 197  Q
    ||||||||||   ||||||||||| ||| ||||  ||||||||||||||||| | ||| |||| |||||| || |||| |||||||||||||||| ||||    
T  31979691 cttaggattc---attgagagtgtgggtgacacaaaaatgggtagaaattaggtcttgttcttttgtaagcttataagttaatttcttgtaactcttttg 31979595  T
Q  198 taacactttcatcatagtggattggagagctgctct 233  Q
     |||||||||||| ||||||||||||| ||||||||    
T  31979594 caacactttcatcttagtggattggagggctgctct 31979559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 22 - 233
Target Start/End: Complemental strand, 4630211 - 4630000
Alignment:
Q  22 gggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatcaaaagtttccttttgttttttctcttaggattcattattgagag 121  Q
    ||||||||||||||| ||||||| ||| |||||||||||||||||||| |||||||||||| |||||||||| ||||||||||||||||||  |||||||    
T  4630211 gggttgggaaacattttaaacacattgggtagtgagatttcaccattggaaggatcaaaagcttccttttgtgttttctcttaggattcat--ttgagag 4630114  T
Q  122 tgtaggtaacac-aaatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaact-ctttgtaacactttcatcatagtggat 219  Q
    | | ||| |||| |||| |||||||||||| | ||| |||| |||||| || |||| |||||||||||||||  ||||||||||||||||| ||||||||    
T  4630113 tttgggtgacacaaaataggtagaaattaggtcttgttcttttgtaagcttataagttaatttcttgtaactattttgtaacactttcatcttagtggat 4630014  T
Q  220 tggagagctgctct 233  Q
    ||||||||||||||    
T  4630013 tggagagctgctct 4630000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 22 - 232
Target Start/End: Original strand, 21801183 - 21801394
Alignment:
Q  22 gggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatc-aaaagtttccttttgttttttctcttaggattcattattgaga 120  Q
    ||||||||||||||||||||||||||| |||||||||||||| ||||| ||||||| ||||| |||||||||| |||||||||||| |||||  ||||||    
T  21801183 gggttgggaaacattgtaaacaccttgggtagtgagatttcaacattggaaggatcaaaaagcttccttttgtgttttctcttagggttcat--ttgaga 21801280  T
Q  121 gtgtaggtaacac-aaatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaactc-tttgtaacactttcatcatagtgga 218  Q
    |||| ||| |||| ||||||||||||||||  | ||| |||| |||||| || |||| |||||||||||||||| ||||||||||||| ||| |||||||    
T  21801281 gtgtgggtgacacaaaatgggtagaaattaagtcttgttcttttgtaagcttataagataatttcttgtaactcttttgtaacacttttatcttagtgga 21801380  T
Q  219 ttggagagctgctc 232  Q
    ||||||||||||||    
T  21801381 ttggagagctgctc 21801394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 16 - 233
Target Start/End: Original strand, 24435804 - 24436022
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatc-aaaagtttccttttgttttttctcttaggattcatta 114  Q
    ||||||| ||||||||||||||||||||||||| |||||||||||||||||||| ||||||| ||||| |||||||||| ||||||||||||||||||||    
T  24435804 tctcttgagttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaaagcttccttttgtgttttctcttaggattcatta 24435903  T
Q  115 ttgagagtgtaggt--aacacaaatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaactc-tttgtaacactttcatca 211  Q
    |   || ||| |||   | | ||||||||||||||||| | ||| | || |||||| || |||||||||||||||||| || ||||||||| |||||||     
T  24435904 t---gaatgtgggtgatataaaaatgggtagaaattaggtcttgtttttttgtaagcttataagctaatttcttgtaattcatttgtaacattttcatcc 24436000  T
Q  212 tagtggattggagagctgctct 233  Q
    |||||||| |||| ||||||||    
T  24436001 tagtggatcggagggctgctct 24436022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 42 - 233
Target Start/End: Original strand, 10077027 - 10077216
Alignment:
Q  42 caccttgcgtagtgagatttcaccattgaaaggatcaaaa-gtttccttttgttttttctcttaggattcattattgagagtgtaggtaacacaaa-tgg 139  Q
    ||||||| |||||||||||| ||||||| ||||||||||| | |||||||||| |||| ||||||||||||||     |||||| ||| ||||||| |||    
T  10077027 caccttgggtagtgagatttgaccattggaaggatcaaaaagcttccttttgtgttttatcttaggattcatt-----gagtgtgggtgacacaaaatgg 10077121  T
Q  140 gtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaactcttt-gtaacactttcatcatagtggattggagagctgctct 233  Q
    ||||||||||| | ||| |||| |||||| || |||||||||||||||||||| ||| |||||||||||||||||||||||||||| ||||||||    
T  10077122 gtagaaattaggtcttgttcttttgtaagcttataagctaatttcttgtaacttttttgtaacactttcatcatagtggattggagggctgctct 10077216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 22709289 - 22709064
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatcaaaagtttccttttgttttttct 100  Q
    ||||||||| || |||||||||||||||||||||||||||||||||||  ||||||||||||||||||| |||||||||||  ||||| |||| | ||||    
T  22709289 tctttgtagtgaggatctcttgggttgggaaacattgtaaacaccttggatagtgagatttcaccattggaaggatcaaaaacttcctcttgtgtcttct 22709190  T
Q  101 c--ttaggattcat-tattgagagtgtaggtaacacaaatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaactctttg 197  Q
    |  ||||| ||||| |  ||||||||  || |||||||||||||||||| |||   ||| ||||||||||| ||  |||||| |||        || |||    
T  22709189 cttttagggttcatattgtgagagtg-gggaaacacaaatgggtagaaactaggacttgttcttgtgtaagcttgcaagctatttt--------tc-ttg 22709100  T
Q  198 taacactttcatcatagtggattggagagctgctct 233  Q
    ||||||||||||||||||||||||||||||||||||    
T  22709099 taacactttcatcatagtggattggagagctgctct 22709064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 31936854 - 31936660
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatc-aaaagtttccttttgttttttc 99  Q
    ||||||||| || ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| ||||| |||  ||||| |||||    
T  31936854 tctttgtagtgaggatctattgggttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaaagcttc--tttgtgttttc 31936757  T
Q  100 tcttaggattcattattgagagtgtagg---taacacaaatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaactcttt 196  Q
    |||||||||||   ||||||||||| ||   ||  | |||||||||||||||||   ||| ||||||||||| ||  |||||| ||||||||||| ||||    
T  31936756 tcttaggattc---attgagagtgtgggtgatatgaaaaatgggtagaaattaggatttgttcttgtgtaagcttgcaagctattttcttgtaacacttt 31936660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 5017314 - 5017493
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatc-aaaagtttccttttgttttttc 99  Q
    ||||||||| || ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| ||||||| ||||| ||||||              
T  5017314 tctttgtagtgaggatctcttgggttgggaaacattgtaaacaccttgggtaatgagatttcaccattggaaggatcgaaaagcttcctt---------- 5017403  T
Q  100 tcttaggattcattattgagagtgtaggtaacac-aaatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaactcttt 196  Q
            ||||||||||||||||| ||| |||| ||||||||||||||||| | ||| ||||||||||| || ||||||||||||||||||| ||||    
T  5017404 --------ttcattattgagagtgtgggtgacacaaaatgggtagaaattaggtcttgttcttgtgtaagcttataagctaatttcttgtaacacttt 5017493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 5674581 - 5674821
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaa--cattgtaaacaccttgcgtagtgag-atttcaccattgaaaggatcaaaagtttccttttgttttt 97  Q
    ||||||||||||   |||||||||||||||||  |||||||| ||||||| |||||||| | |||||||||| ||||||| |||| ||||| | || | |    
T  5674581 tctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcaccattggaaggatctaaagcttcctctagtgtct 5674680  T
Q  98 tctctt--aggattcattat-tgagagtgtaggtaacacaaatgggtagaaattagatattgct-cttgtgtaagtttctaagctaat--ttcttgtaac 191  Q
    ||||||  ||| |||||  | ||||||||  || ||||| || ||||||||  ||| | ||| | |||||||||| ||  |||||| |  ||||||||||    
T  5674681 tctcttttagggttcatattgtgagagtgg-ggaaacaccaaagggtagaatctaggtcttgtttcttgtgtaagcttgcaagctattgtttcttgtaac 5674779  T
Q  192 tctttgtaacactttcatcatagtggattggagagctgctct 233  Q
     ||||||||||||||||||||| |||||||||||||||||||    
T  5674780 cctttgtaacactttcatcatattggattggagagctgctct 5674821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 22 - 124
Target Start/End: Complemental strand, 14521932 - 14521831
Alignment:
Q  22 gggttgggaaacattgtaaacaccttgcgtagtgag-atttcaccattgaaaggatcaaaagt-ttccttttgttttttctcttaggattcattattgag 119  Q
    ||||||||||||||||||||||||||| |||||||| |||||||||||| |||||| |||| | |||||||  | ||||||||||||||   ||||||||    
T  14521932 gggttgggaaacattgtaaacaccttgggtagtgagaatttcaccattggaaggataaaaaatcttcctttaatgttttctcttaggat---ttattgag 14521836  T
Q  120 agtgt 124  Q
    |||||    
T  14521835 agtgt 14521831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 19 - 112
Target Start/End: Original strand, 31076772 - 31076866
Alignment:
Q  19 cttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatc-aaaagtttccttttgttttttctcttaggattcat 112  Q
    ||||||||| ||||| |||||||||||||  ||| |||||||||||||||| || |||| ||||  || |||| || ||||||||||||||||||    
T  31076772 cttgggttgagaaactttgtaaacaccttaggtattgagatttcaccattggaatgatcaaaaaaatttctttagtgttttctcttaggattcat 31076866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 174 - 233
Target Start/End: Original strand, 28155550 - 28155608
Alignment:
Q  174 aagctaatttcttgtaactctttgtaacactttcatcatagtggattggagagctgctct 233  Q
    ||||||| ||||||||||  |||||||||||||| ||||| |||||||||||||||||||    
T  28155550 aagctaaattcttgtaaccttttgtaacactttc-tcatattggattggagagctgctct 28155608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 48
Target Start/End: Complemental strand, 2171762 - 2171730
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    |||||||||||||||||||||||||||||||||    
T  2171762 tctcttgggttgggaaacattgtaaacaccttg 2171730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 48
Target Start/End: Complemental strand, 3039135 - 3039103
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    |||||||||||||||||||||||||||||||||    
T  3039135 tctcttgggttgggaaacattgtaaacaccttg 3039103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 48
Target Start/End: Complemental strand, 28137640 - 28137608
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    |||||||||||||||||||||||||||||||||    
T  28137640 tctcttgggttgggaaacattgtaaacaccttg 28137608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 48
Target Start/End: Complemental strand, 33160585 - 33160553
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    |||||||||||||||||||||||||||||||||    
T  33160585 tctcttgggttgggaaacattgtaaacaccttg 33160553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 48
Target Start/End: Complemental strand, 33211417 - 33211385
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    |||||||||||||||||||||||||||||||||    
T  33211417 tctcttgggttgggaaacattgtaaacaccttg 33211385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 11857070 - 11857020
Alignment:
Q  182 ttcttgtaactctttgtaacactttcatcatagtggattggagagctgctct 233  Q
    ||||||||||  |||||||||||||| ||||| |||||||||||||||||||    
T  11857070 ttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctct 11857020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 182 - 233
Target Start/End: Original strand, 22010686 - 22010736
Alignment:
Q  182 ttcttgtaactctttgtaacactttcatcatagtggattggagagctgctct 233  Q
    ||||||||||  |||||||||||||| ||||| |||||||||||||||||||    
T  22010686 ttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctct 22010736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 173 - 231
Target Start/End: Original strand, 31076931 - 31076990
Alignment:
Q  173 taagctaatttcttgtaactc-tttgtaacactttcatcatagtggattggagagctgct 231  Q
    ||||||||||| ||||||| | |||||| |||||| ||| ||||||||||||||||||||    
T  31076931 taagctaatttattgtaacccatttgtatcacttttatcttagtggattggagagctgct 31076990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 16 - 113
Target Start/End: Original strand, 33721391 - 33721489
Alignment:
Q  16 tctcttgggttgggaaacatt-gtaaacaccttgcgtagtgagatttcaccattgaaaggatcaaaa-gtttccttttgttttttctcttaggattcatt 113  Q
    |||||| |||||||||||||| |||||||||||  ||||||||||||||  |||| || ||| |||| | | ||||| || |||||||||||||||||||    
T  33721391 tctcttaggttgggaaacatttgtaaacaccttt-gtagtgagatttcattattggaatgatgaaaaagctccctttagtgttttctcttaggattcatt 33721489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 233
Target Start/End: Original strand, 14737566 - 14737615
Alignment:
Q  183 tcttgtaactctttgtaacactttcatcatagtggattggagagctgctct 233  Q
    |||||||||  |||||||||||||| ||||| |||||||||||||||||||    
T  14737566 tcttgtaaccttttgtaacactttc-tcatattggattggagagctgctct 14737615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 233
Target Start/End: Original strand, 14742426 - 14742475
Alignment:
Q  183 tcttgtaactctttgtaacactttcatcatagtggattggagagctgctct 233  Q
    |||||||||  |||||||||||||| ||||| |||||||||||||||||||    
T  14742426 tcttgtaaccttttgtaacactttc-tcatattggattggagagctgctct 14742475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 233
Target Start/End: Original strand, 33330424 - 33330484
Alignment:
Q  173 taagctaatttcttgtaactcttt-gtaacactttcatcatagtggattggagagctgctct 233  Q
    |||||||  ||||||||||||||| ||||||| |||| |||| |||||||||||||||||||    
T  33330424 taagctagattcttgtaactcttttgtaacacattca-catattggattggagagctgctct 33330484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 233
Target Start/End: Original strand, 33335921 - 33335981
Alignment:
Q  173 taagctaatttcttgtaactcttt-gtaacactttcatcatagtggattggagagctgctct 233  Q
    |||||||  ||||||||||||||| ||||||| |||| |||| |||||||||||||||||||    
T  33335921 taagctagattcttgtaactcttttgtaacacattca-catattggattggagagctgctct 33335981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 48
Target Start/End: Complemental strand, 5406430 - 5406398
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    ||||| |||||||||||||||||||||||||||    
T  5406430 tctctcgggttgggaaacattgtaaacaccttg 5406398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 48
Target Start/End: Complemental strand, 5410755 - 5410723
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    ||||| |||||||||||||||||||||||||||    
T  5410755 tctctcgggttgggaaacattgtaaacaccttg 5410723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 6005514 - 6005463
Alignment:
Q  182 ttcttgtaactcttt-gtaacactttcatcatagtggattggagagctgctct 233  Q
    ||||||||||||||| ||||||| |||| |||| |||||||||||||||||||    
T  6005514 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctct 6005463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 48
Target Start/End: Complemental strand, 9183263 - 9183231
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    |||| ||||||||||||||||||||||||||||    
T  9183263 tctcctgggttgggaaacattgtaaacaccttg 9183231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 48
Target Start/End: Complemental strand, 16452561 - 16452529
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    |||||||||||| ||||||||||||||||||||    
T  16452561 tctcttgggttgagaaacattgtaaacaccttg 16452529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 48
Target Start/End: Original strand, 16567142 - 16567174
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    ||||||||||| |||||||||||||||||||||    
T  16567142 tctcttgggtttggaaacattgtaaacaccttg 16567174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 48
Target Start/End: Original strand, 16568979 - 16569011
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    ||||||||||| |||||||||||||||||||||    
T  16568979 tctcttgggtttggaaacattgtaaacaccttg 16569011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 16838841 - 16838790
Alignment:
Q  182 ttcttgtaactcttt-gtaacactttcatcatagtggattggagagctgctct 233  Q
    ||||||||||||||| ||||||| |||| |||| |||||||||||||||||||    
T  16838841 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctct 16838790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 48
Target Start/End: Complemental strand, 31404905 - 31404873
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    ||||||||||||| |||||||||||||||||||    
T  31404905 tctcttgggttggaaaacattgtaaacaccttg 31404873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 134; Significance: 1e-69; HSPs: 65)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 2479615 - 2479382
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatcaaaagtttccttttgttttttct 100  Q
    ||||| ||| || ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| |||||||| | | ||||    
T  2479615 tctttatagtgaggatctcttgggttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaagcttccttttatatcttct 2479516  T
Q  101 ctt-aggattcattattgagagtgtaggtaacacaaatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaactctttgta 199  Q
    ||| ||| |||||||||||||| || || |||||| ||||||||||||||| | ||| ||||||||||| ||  |||||| |||||| ||||||||||||    
T  2479515 ctttagggttcattattgagagagtgggaaacacacatgggtagaaattaggtcttgttcttgtgtaagcttgcaagctattttcttataactctttgta 2479416  T
Q  200 acactttcatcatagtggattggagagctgctct 233  Q
    ||||||||||||||||||||| ||||||||||||    
T  2479415 acactttcatcatagtggatttgagagctgctct 2479382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 19 - 233
Target Start/End: Complemental strand, 49091924 - 49091707
Alignment:
Q  19 cttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatc-aaaagtttccttttgttttttctcttaggattcattattg 117  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||||||| ||||||| ||||| |||||||||| ||||||||||||||||||||| |    
T  49091924 cttgggttgggaaacattgaaaacaccttgggtagtgagatttcaccattggaaggatcaaaaagcttccttttgtgttttctcttaggattcattatgg 49091825  T
Q  118 agagtgtaggtaacaca-aatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaactc-tttgtaacactttcatcatagt 215  Q
    ||||||| ||| ||||| |||||||||||||||| | ||| ||||||||||| || |||| |||||||||||||||| ||||||||||||||||||||||    
T  49091824 agagtgtgggtgacacagaatgggtagaaattaggtcttgttcttgtgtaagcttataaggtaatttcttgtaactcttttgtaacactttcatcatagt 49091725  T
Q  216 ggattggagagctgctct 233  Q
    ||||||||||| ||||||    
T  49091724 ggattggagagttgctct 49091707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 34 - 233
Target Start/End: Complemental strand, 56195 - 55993
Alignment:
Q  34 attgtaaacaccttgcgtagtgagatttcaccattgaaaggatcaaaa-gtttccttttgttttttctcttaggattcattattgagagtgtaggtaaca 132  Q
    ||||||||||||||| |||||||||||||||||||| ||||||||||| | ||| |||||| |||||||||||||||||||||||||||||| ||| |||    
T  56195 attgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaaagcttctttttgtgttttctcttaggattcattattgagagtgtgggtgaca 56096  T
Q  133 caaa-tgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaactc-tttgtaacactttcatcatagtggattggagagctgc 230  Q
    |||| |||||||||||||| | ||| ||||||||||| || ||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  56095 caaaatgggtagaaattaggtcttgttcttgtgtaagcttataagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagggctgc 55996  T
Q  231 tct 233  Q
    |||    
T  55995 tct 55993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 2647515 - 2647747
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatc-aaaagtttccttttgttttttc 99  Q
    ||||||||| || |||||||||||||||||||||| |||| ||||||| |||||||||||||||||||| ||||||| ||||  ||| |||||| |||||    
T  2647515 tctttgtagtgaggatctcttgggttgggaaacatggtaagcaccttgggtagtgagatttcaccattggaaggatcaaaaaacttcattttgtgttttc 2647614  T
Q  100 tcttaggattcattattgagagtgtaggtaacac-aaatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaactc-tttg 197  Q
    |||||||||||   ||||||||||| ||| |||| ||||||||||||||||| | ||| ||||||||||| || ||||||||||||||||||||| ||||    
T  2647615 tcttaggattc---attgagagtgtgggtgacacaaaatgggtagaaattaggtcttgttcttgtgtaagcttataagctaatttcttgtaactcttttg 2647711  T
Q  198 taacactttcatcatagtggattggagagctgctct 233  Q
    ||||||||||||||||||||||||||| ||||||||    
T  2647712 taacactttcatcatagtggattggagggctgctct 2647747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 22 - 233
Target Start/End: Complemental strand, 29160063 - 29159849
Alignment:
Q  22 gggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatc-aaaagtttccttttgttttttctcttaggattcattattgaga 120  Q
    ||||||||||||||||||||||||||| |||||||||||||| ||||| ||||||| ||||| |||||||||| ||||||||||||||||| ||||| ||    
T  29160063 gggttgggaaacattgtaaacaccttgggtagtgagatttcaacattggaaggatcaaaaagcttccttttgtgttttctcttaggattca-tattgtga 29159965  T
Q  121 gtgtaggtaacac--aaatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaactc-tttgtaacactttcatcatagtgg 217  Q
    | || ||| ||||  ||||||||||||||||| | ||| ||||||||||| || ||||||||||||||||||||| ||||||||||||||||||||||||    
T  29159964 gagtgggtgacacaaaaatgggtagaaattaggtcttgttcttgtgtaagcttgtaagctaatttcttgtaactcttttgtaacactttcatcatagtgg 29159865  T
Q  218 attggagagctgctct 233  Q
    ||||||||||||||||    
T  29159864 attggagagctgctct 29159849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 4796486 - 4796716
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatc-aaaagtttccttttgttttttc 99  Q
    ||||||||| || ||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| ||||||| ||||| ||| |||||| |||||    
T  4796486 tctttgtagtgaggatctcttgggttggaaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaaagcttctttttgtgttttc 4796585  T
Q  100 tcttaggattcattattgagagtgtaggtaacac-aaatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaactc-tttg 197  Q
    |||||||||||   ||||||| ||||||| |||| ||||||||| |||| || | ||| ||||||||||| || ||||||||||||||||||||| ||||    
T  4796586 tcttaggattc---attgagaatgtaggtgacacaaaatgggtataaatgaggtcttgttcttgtgtaagcttataagctaatttcttgtaactcttttg 4796682  T
Q  198 taacactttcatcatagtggattggagagctgct 231  Q
    ||||| ||||||||||||||||| ||| ||||||    
T  4796683 taacaatttcatcatagtggatttgagggctgct 4796716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 46516123 - 46516361
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatc-aaaagtttccttttgttttttc 99  Q
    ||||||||| || ||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| ||||||| ||||| ||| |||||| |||||    
T  46516123 tctttgtagtgaggatctcttgagttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaaagcttcattttgtgttttc 46516222  T
Q  100 tcttaggattcattatt---gagagtgtaggtaacac-aaatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaactc-t 194  Q
    ||||| ||||||||  |   | | |||| ||| |||| ||||||||||||||||  | ||| ||||||||||| || ||||||||||||||||||||| |    
T  46516223 tcttaagattcattggtggagtgtgtgtgggtgacacaaaatgggtagaaattatgtcttgttcttgtgtaagcttttaagctaatttcttgtaactctt 46516322  T
Q  195 ttgtaacactttcatcatagtggattggagagctgctct 233  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  46516323 ttgtaacactttcatcatagtggattggagggctgctct 46516361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 16 - 233
Target Start/End: Complemental strand, 2580654 - 2580436
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatc-aaaagtttccttttgttttttctcttaggattcatta 114  Q
    ||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||| ||||| |||||||||| ||||||||||||||||   |    
T  2580654 tctcttgggttggaaaacattgtaaacaccttgggtagtgagatttcaccattgaaaggatcaaaaagcttccttttgtgttttctcttaggattc---a 2580558  T
Q  115 ttgagagtgtagg---taacacaaatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaactctttgtaacactttcatca 211  Q
    |||||||||| ||   ||  | ||||||||||||| |||   ||| ||||||||||| ||  |||||| ||||||||||||| ||||||||||||||||     
T  2580557 ttgagagtgtgggtgatatgaaaaatgggtagaaactaggacttgttcttgtgtaagcttgcaagctattttcttgtaactcattgtaacactttcatct 2580458  T
Q  212 tagtggattggagagctgctct 233  Q
    ||||||||||||||||||||||    
T  2580457 tagtggattggagagctgctct 2580436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 20284368 - 20284135
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatc-aaaagtttccttttgttttttc 99  Q
    ||||||||| || | ||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| ||||| |||||||||| |||||    
T  20284368 tctttgtagtgaggttctcttgggttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaaagcttccttttgtgttttc 20284269  T
Q  100 tcttaggattcattattgagagtgtagg---taacacaaatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaactcttt 196  Q
    |||||||||||   ||||||||||| ||   ||  | ||| |||||||||||||   ||| |||| |||||| || ||||||||||||||||||| | ||    
T  20284268 tcttaggattc---attgagagtgtgggtgatatgaaaaaagggtagaaattaggacttgttcttttgtaagcttataagctaatttcttgtaacgcatt 20284172  T
Q  197 gtaacactttcatcatagtggattggagagctgctct 233  Q
    |||||||||||||| ||||||||||||| ||||||||    
T  20284171 gtaacactttcatcttagtggattggagggctgctct 20284135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 23402831 - 23403063
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatc-aaaagtttccttttgttttttc 99  Q
    ||||||||| || | ||||||||||||||||||||||||||||||||| |||||||||||||||||||| || |||| ||||| |||||||||| |||||    
T  23402831 tctttgtagtgaggttctcttgggttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaatgatcaaaaagcttccttttgtgttttc 23402930  T
Q  100 tcttaggattcattattgagagtgtaggtaa---cacaaatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaactcttt 196  Q
    |||||||||||   |||||||||||  || |    | |||||||||||||||||   ||| |||| |||||| || ||||||||||||||||||||| ||    
T  23402931 tcttaggattc---attgagagtgtgagtgatgtgaaaaatgggtagaaattaggacttgttcttttgtaagcttataagctaatttcttgtaactcatt 23403027  T
Q  197 gtaacactttcatcatagtggattggagagctgctc 232  Q
    |||||||||||||| |||| |||||||| |||||||    
T  23403028 gtaacactttcatcttagtagattggagggctgctc 23403063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 16 - 233
Target Start/End: Original strand, 9189840 - 9190059
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatc-aaaagtttccttttgttttttctcttaggattcatta 114  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| ||||| |||||| ||| ||||||||||||||||||||    
T  9189840 tctcttgggttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaaagcttccttgtgtgttttctcttaggattcatta 9189939  T
Q  115 ttgagagtgtagg---taacacaaatgggtagaaattagatattgctcttgtgtaagtttctaagcta-atttcttgtaactctttgtaacactttcatc 210  Q
       ||||||| ||   ||  | |||||||||||||||||   ||| ||||||||||| ||  ||||||  ||||||||||||| ||||||||||||||||    
T  9189940 ---agagtgtgggtgatatgaaaaatgggtagaaattaggacttgttcttgtgtaagcttgcaagctatttttcttgtaactcattgtaacactttcatc 9190036  T
Q  211 atagtggattggagagctgctct 233  Q
     ||||||||||||||||||||||    
T  9190037 ttagtggattggagagctgctct 9190059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 22 - 233
Target Start/End: Complemental strand, 21983544 - 21983330
Alignment:
Q  22 gggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatcaaaagtttccttttgttttttctc-ttaggattcat-tattgag 119  Q
    |||| |||||||||||||||||||||| |||||||||||||||||||| |||||||| ||| |||||||||| ||||||| ||||| ||||| | |||||    
T  21983544 gggtggggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatcataagcttccttttgtgttttctctttagggttcatattttgag 21983445  T
Q  120 agtgtaggtaacac-aaatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaactc--tttgtaacactttcatcatagtg 216  Q
    ||||  ||| |||| ||||||||||||| ||| | ||| ||||||||||| ||  |||||| |||||||||||||  |||||||||||||||||||||||    
T  21983444 agtg--ggtgacacaaaatgggtagaaactaggtcttgttcttgtgtaagcttgcaagctattttcttgtaactctttttgtaacactttcatcatagtg 21983347  T
Q  217 gattggagagctgctct 233  Q
    |||||||||||||||||    
T  21983346 gattggagagctgctct 21983330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 16 - 233
Target Start/End: Original strand, 33332283 - 33332501
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatc-aaaagtttccttttgttttttctcttaggattcatta 114  Q
    |||||||||||| ||||||||||||||| |||| |||||||||||||||||||| ||||||| ||||| |||| ||||| |||||||||||||   || |    
T  33332283 tctcttgggttgagaaacattgtaaacatcttgggtagtgagatttcaccattggaaggatcaaaaagcttccctttgtgttttctcttagga---atca 33332379  T
Q  115 ttgagagtgtaggt--aacacaaatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaactc-tttgtaacactttcatca 211  Q
    ||||||||||  ||   ||| ||||| ||||||||||| | ||| |||| |||||| || ||||||||||||||||||||| |||||||||||||||||     
T  33332380 ttgagagtgtgcgtgatacaaaaatgagtagaaattaggtcttgttcttttgtaagcttataagctaatttcttgtaactcttttgtaacactttcatct 33332479  T
Q  212 tagtggattggagagctgctct 233  Q
    ||||||||||||| ||||||||    
T  33332480 tagtggattggagggctgctct 33332501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 19 - 233
Target Start/End: Complemental strand, 35961078 - 35960862
Alignment:
Q  19 cttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatcaaaa-gtttccttttgttttttctcttaggattcattattg 117  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||| ||||||||||| | |||||||||  |||||||||| |||||||  |||    
T  35961078 cttgggttgggaaacattgtaaacaccttaggtagtgagatttcaccattggaaggatcaaaaagcttccttttgcgttttctcttaagattcatctttg 35960979  T
Q  118 agagtgtaggtaacacaaatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaactc-tttgtaacactttcatcatagtg 216  Q
    || |||   |  |   ||||||||||||||||| ||||| |||| |||||| || |||||||||||||| |||||| |||||||||||||||||||||||    
T  35960978 agtgtgggtgatatgaaaatgggtagaaattaggtattgttcttttgtaagcttataagctaatttcttctaactcatttgtaacactttcatcatagtg 35960879  T
Q  217 gattggagagctgctct 233  Q
    | |||||| ||||||||    
T  35960878 gtttggagggctgctct 35960862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 47263945 - 47263722
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatcaaaagtttccttttgttttttct 100  Q
    ||||||||| ||  ||||||| ||||||||||||||||||| |||||| |||||||||||||||||||| |||||||||||| |||||||||| | ||||    
T  47263945 tctttgtagtgagaatctcttcggttgggaaacattgtaaataccttgggtagtgagatttcaccattggaaggatcaaaagcttccttttgtgtcttct 47263846  T
Q  101 -cttaggattcattattgagagtgtaggtaacacaaatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaactctttgta 199  Q
      ||||| |||||||||||||| || || ||||||||||| |||||||||| | ||| ||||||||||| ||  |||||| ||||          || ||    
T  47263845 atttagggttcattattgagagagtgggaaacacaaatggatagaaattaggtcttgttcttgtgtaagcttgcaagctattttc----------ttata 47263756  T
Q  200 acactttcatcatagtggattggagagctgctct 233  Q
    ||||||||||||||||||||||||||||||||||    
T  47263755 acactttcatcatagtggattggagagctgctct 47263722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 21640091 - 21639854
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaa--cattgtaaacaccttgcgtagtgagatttcaccattgaaaggatcaaaagtttccttt--tgtttt 96  Q
    |||||||||||| |||||||||||||||||||  |||||||||||||||| |||||||||||||||||||| ||||||| |||| ||||| |  ||| ||    
T  21640091 tctttgtagagaggatctcttgggttgggaaaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatctaaagcttcctctagtgtctt 21639992  T
Q  97 ttctcttaggattcat-tattgagagtgtaggtaacacaaatgggtagaaattagatattgctcttgtgtaagtttctaagcta-atttcttgtaactct 194  Q
     ||| ||||| ||||| |  ||||||||  || |||||||||||||||||  ||| | ||| ||||||||||| ||  ||||||  ||||||||||| ||    
T  21639991 ctcttttagggttcatattgtgagagtg-gggaaacacaaatgggtagaatctaggtcttgttcttgtgtaagcttgcaagctatttttcttgtaaccct 21639893  T
Q  195 ttgtaacactttcatcatagtggattggagagctgctct 233  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  21639892 ttgtaacactttcattatagtggattggagagctgctct 21639854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 21646289 - 21646052
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaa--cattgtaaacaccttgcgtagtgagatttcaccattgaaaggatcaaaagtttccttt--tgtttt 96  Q
    |||||||||||| |||||||||||||||||||  |||||||||||||||| |||||||||||||||||||| ||||||| |||  ||||| |  ||| ||    
T  21646289 tctttgtagagaggatctcttgggttgggaaaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatctaaatcttcctctagtgtctt 21646190  T
Q  97 ttctcttaggattcat-tattgagagtgtaggtaacacaaatgggtagaaattagatattgctcttgtgtaagtttctaagcta-atttcttgtaactct 194  Q
     ||| ||||| ||||| |  ||||||||  || |||||||||||||||||  ||| | ||| ||||||||||| ||  ||||||  ||||||||||| ||    
T  21646189 ctcttttagggttcatattgtgagagtg-gggaaacacaaatgggtagaatctaggtcttgttcttgtgtaagcttgcaagctatttttcttgtaaccct 21646091  T
Q  195 ttgtaacactttcatcatagtggattggagagctgctct 233  Q
    || ||||||||||||||||||||||||||||||||||||    
T  21646090 ttttaacactttcatcatagtggattggagagctgctct 21646052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 66 - 233
Target Start/End: Original strand, 44848567 - 44848735
Alignment:
Q  66 attgaaaggatcaaaagtttccttttgttttttctcttagga-ttcattattgagagtgtaggtaacacaaatgggtagaaattagatattgctcttgtg 164  Q
    |||| |||||||||||| |||||||||| | |||||||  || |||||||||||||| || || |||||||||||||||||||||| | ||  |||||||    
T  44848567 attggaaggatcaaaagcttccttttgtgtcttctctttagagttcattattgagagagtgggaaacacaaatgggtagaaattaggtcttattcttgtg 44848666  T
Q  165 taagtttctaagctaatttcttgtaactctttgtaacactttcatcatagtggattggagagctgctct 233  Q
    |||| ||  |||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44848667 taagcttgcaagcttttttcttgtaactctttgtaacactttcatcatagtggattggagagctgctct 44848735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 21989187 - 21988952
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatcaaaagtttccttttgttttttct 100  Q
    ||||||||| || ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| |||||||| ||| |||||||  | ||||||    
T  21989187 tctttgtagtgaggatctcttgggttgggaaacattgtaaacaccttgggtagtgagattttaccattggaaggatcataagcttcctttattgttttct 21989088  T
Q  101 c-ttaggattcat-tattgagagtgtaggtaacac-aaatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaactc--tt 195  Q
    | ||||| ||||| | || ||||||  ||| |||| ||||||||||||| ||| | ||  |||||| |||| ||  || ||| |||||||||||||  ||    
T  21989087 ctttagggttcatatttttagagtg--ggtgacacaaaatgggtagaaactaggttttattcttgtataagcttgcaatctattttcttgtaactctttt 21988990  T
Q  196 tgtaacactttcatcatagtggattggagagctgctct 233  Q
    |||||||||||||||| |||||||||||||| ||||||    
T  21988989 tgtaacactttcatcaaagtggattggagagttgctct 21988952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 18409045 - 18408809
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaa--cattgtaaacaccttgcgtagtgagatttcaccattgaaaggatcaaaagtttccttttgt-tttt 97  Q
    ||||||||| || |||||||||||||||||||  |||||||||||||||| ||||||||||||||||||| ||||||||  ||| ||||| |||| | ||    
T  18409045 tctttgtagtgaggatctcttgggttgggaaaaacattgtaaacaccttgggtagtgagatttcaccattaaaaggatcttaagcttcctcttgtgtctt 18408946  T
Q  98 tctcttaggattcat-tattgagagtgtaggtaacacaaatgggtagaaattagatattgctcttgtgtaagtttctaagcta-atttcttgtaactctt 195  Q
     || ||||| ||||| |  ||||||||  || |||||||||||||||||| |||   ||| ||||||||||| ||  ||| ||  ||||||||||| |||    
T  18408945 ccttttagggttcatattgtgagagtg-gggaaacacaaatgggtagaaactaggacttgttcttgtgtaagcttgcaagttatttttcttgtaaccctt 18408847  T
Q  196 tgtaacactttcatcatagtggattggagagctgctct 233  Q
    |||||||||||||||||| |||||||||||||||||||    
T  18408846 tgtaacactttcatcatactggattggagagctgctct 18408809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 18413921 - 18413685
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaa--cattgtaaacaccttgcgtagtgagatttcaccattgaaaggatcaaaagtttccttttgtttttt 98  Q
    ||||||||| || |||||||||||||||||||  || ||||||||||||| |||||||||||||||||||| |||||||  ||| ||||| |||| | ||    
T  18413921 tctttgtagtgaggatctcttgggttgggaaaaacaatgtaaacaccttgggtagtgagatttcaccattggaaggatcttaagcttcctcttgtgtctt 18413822  T
Q  99 c-tcttaggattcattat-tgagagtgtaggtaacacaaatgggtagaaattagatattgctcttgtgtaagtttctaagctaattt-cttgtaactctt 195  Q
    | | ||||| |||||  | ||||||||  || |||||||||||||||||| |||   ||| ||||||||||| ||  || ||| ||| |||||||| |||    
T  18413821 ccttttagggttcatattgtgagagtgg-ggaaacacaaatgggtagaaactaggacttgttcttgtgtaagcttgcaatctatttttcttgtaaccctt 18413723  T
Q  196 tgtaacactttcatcatagtggattggagagctgctct 233  Q
    ||||||||||||||||||||||||||||||||||||||    
T  18413722 tgtaacactttcatcatagtggattggagagctgctct 18413685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 16 - 205
Target Start/End: Original strand, 9235415 - 9235605
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatc-aaaagtttccttttgttttttctcttaggattcatta 114  Q
    |||||||||||||||||||||||||||||||||  |||||| |||||||||||| ||||||| ||||| |||||||||| ||||||||||||||||        
T  9235415 tctcttgggttgggaaacattgtaaacaccttggatagtgatatttcaccattgcaaggatcaaaaagcttccttttgtgttttctcttaggattc---g 9235511  T
Q  115 ttgagagtgtagg---taacacaaatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaactctttgtaacactt 205  Q
    |||||||||  ||   ||  | |||||||||||||||||   ||| |||| |||||| || ||||||||||||||||||||| |||||||||||    
T  9235512 ttgagagtgcgggtgatatgaaaaatgggtagaaattaggacttgttcttttgtaagcttataagctaatttcttgtaactcattgtaacactt 9235605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 16 - 233
Target Start/End: Original strand, 9185007 - 9185216
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatc-aaaagtttccttttgttttttctcttaggattcatta 114  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| ||||| |||||| ||| ||||||||||||||||||||    
T  9185007 tctcttgggttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaaagcttccttgtgtgttttctcttaggattcatta 9185106  T
Q  115 ttgagagtgtagg---taacacaaatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaactctttgtaacactttcatca 211  Q
       ||||||| ||   ||  | |||||||||||||||||   ||| ||||||||||| ||  |||||| |||        || ||||||||||||||||     
T  9185107 ---agagtgtgggtgatatgaaaaatgggtagaaattaggacttgttcttgtgtaagcttgcaagctatttt--------tc-ttgtaacactttcatct 9185194  T
Q  212 tagtggattggagagctgctct 233  Q
    ||||||||||||||||| ||||    
T  9185195 tagtggattggagagcttctct 9185216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 3047533 - 3047311
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatc-aaaagtttccttttgttttttc 99  Q
    ||||||||| || | ||||||||||||||||||| | ||| || |||| |||||||||||||| ||||| ||||||| ||||| |||||||||| ||||     
T  3047533 tctttgtagtgaggttctcttgggttgggaaacactataatcatcttgggtagtgagatttcatcattggaaggatcaaaaagcttccttttgtgtttta 3047434  T
Q  100 tcttaggattcattattgagagtgtaggtaac--acaaatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaactc-ttt 196  Q
    ||||| |||||   ||||||||||| ||| ||  | ||||||||||||||||| | ||| |||| ||| || || |||| | |||||||||||||| |||    
T  3047433 tcttaagattc---attgagagtgtgggtgacttaaaaatgggtagaaattaggtcttgttctt-tgtgagcttttaagttgatttcttgtaactcattt 3047338  T
Q  197 gtaacactttcatcatagtggattgga 223  Q
    ||| |||||||||  ||||||||||||    
T  3047337 gtaccactttcatattagtggattgga 3047311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 5817088 - 5817321
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatc-aaaagtttccttttgttttttc 99  Q
    ||||||||| || | ||| || ||||||||||||||||||| |||||| | |||||||||||||||||| ||||||| ||||| |||||||||| ||||     
T  5817088 tctttgtagtgaggttctatttggttgggaaacattgtaaataccttggggagtgagatttcaccattggaaggatcaaaaagcttccttttgtgttttt 5817187  T
Q  100 tcttaggattcattattgagagtgtaggtaac---acaaatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaa-ctctt 195  Q
    |||||||||||   |||||||||||  || ||   | |||||| |||||||||| | ||| |||| ||| || |  || || |||||||||||| | |||    
T  5817188 tcttaggattc---attgagagtgtgagtgacttgaaaaatggatagaaattaggttttgttctt-tgtgagctcttatgcaaatttcttgtaacccctt 5817283  T
Q  196 tgtaacactttcatcatagtggattggagagctgctct 233  Q
    |||| |||||||||  ||||||||||||||||||||||    
T  5817284 tgtatcactttcatattagtggattggagagctgctct 5817321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 44847943 - 44848011
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattg 69  Q
    ||||||||| || |||||||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  44847943 tctttgtagtgaggatctcttgggttgggaaacattgtaaacaccttggatagtgagatttcaccattg 44848011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 1533255 - 1533495
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaa--cattgtaaacaccttgcgtagtgag-atttcaccattgaaaggatcaaaagtttccttttgttttt 97  Q
    ||||||||||||   |||||||||||||||||  |||||||| ||||||| |||||||| | |||||||||| ||||||| |||| ||||| | || | |    
T  1533255 tctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcaccattggaaggatctaaagcttcctctagtgtct 1533354  T
Q  98 tctctt--aggattcattattgagagtgtaggtaa-cacaaatgggtagaaattagatattgct-cttgtgtaagtttctaagctaat--ttcttgtaac 191  Q
    ||||||  ||| ||||| |||| ||| || || || ||| || ||||||||  ||| | ||| | |||||||||| ||  |||||| |  ||||||||||    
T  1533355 tctcttttagggttcat-attgtgagagtgggaaaacaccaaagggtagaatctaggtcttgtttcttgtgtaagcttgcaagctattgtttcttgtaac 1533453  T
Q  192 tctttgtaacactttcatcatagtggattggagagctgctct 233  Q
     ||||||||||||||||||||| |||||||||||| ||||||    
T  1533454 cctttgtaacactttcatcatattggattggagagatgctct 1533495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 181 - 233
Target Start/End: Complemental strand, 2058063 - 2058011
Alignment:
Q  181 tttcttgtaactctttgtaacactttcatcatagtggattggagagctgctct 233  Q
    ||||||||||| ||||||||||||||||||||| |||||||||||||||||||    
T  2058063 tttcttgtaaccctttgtaacactttcatcatattggattggagagctgctct 2058011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 134 - 233
Target Start/End: Original strand, 28617177 - 28617276
Alignment:
Q  134 aaatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaactct-ttgtaacactttcatcatagtggattggagagctgctc 232  Q
    |||| |||||||||||| | ||| |||| ||| || || ||||||||||||||||||| |  ||||| |||||||||| |||||||||||||||||||||    
T  28617177 aaataggtagaaattaggttttgttctt-tgtgagcttttaagctaatttcttgtaaccccattgtatcactttcatcttagtggattggagagctgctc 28617275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 181 - 233
Target Start/End: Original strand, 20357547 - 20357598
Alignment:
Q  181 tttcttgtaactctttgtaacactttcatcatagtggattggagagctgctct 233  Q
    ||||||||||| ||||||||||||||| ||||| |||||||||||||||||||    
T  20357547 tttcttgtaaccctttgtaacactttc-tcatattggattggagagctgctct 20357598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 48
Target Start/End: Original strand, 4178711 - 4178743
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    |||||||||||||||||||||||||||||||||    
T  4178711 tctcttgggttgggaaacattgtaaacaccttg 4178743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 48
Target Start/End: Original strand, 4586097 - 4586129
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    |||||||||||||||||||||||||||||||||    
T  4586097 tctcttgggttgggaaacattgtaaacaccttg 4586129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 173 - 233
Target Start/End: Complemental strand, 16880178 - 16880119
Alignment:
Q  173 taagctaatttcttgtaactctttgtaacactttcatcatagtggattggagagctgctct 233  Q
    |||||||  ||||||||||||||||||| || |||| |||| |||||||||||||||||||    
T  16880178 taagctagattcttgtaactctttgtaaaacattca-catattggattggagagctgctct 16880119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 173 - 233
Target Start/End: Complemental strand, 16885034 - 16884975
Alignment:
Q  173 taagctaatttcttgtaactctttgtaacactttcatcatagtggattggagagctgctct 233  Q
    |||||||  ||||||||||||||||||| || |||| |||| |||||||||||||||||||    
T  16885034 taagctagattcttgtaactctttgtaaaacattca-catattggattggagagctgctct 16884975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 48
Target Start/End: Original strand, 19502114 - 19502146
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    |||||||||||||||||||||||||||||||||    
T  19502114 tctcttgggttgggaaacattgtaaacaccttg 19502146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 48
Target Start/End: Complemental strand, 24514992 - 24514960
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    |||||||||||||||||||||||||||||||||    
T  24514992 tctcttgggttgggaaacattgtaaacaccttg 24514960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 48
Target Start/End: Original strand, 29990991 - 29991023
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    |||||||||||||||||||||||||||||||||    
T  29990991 tctcttgggttgggaaacattgtaaacaccttg 29991023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 48
Target Start/End: Complemental strand, 31733201 - 31733169
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    |||||||||||||||||||||||||||||||||    
T  31733201 tctcttgggttgggaaacattgtaaacaccttg 31733169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 48
Target Start/End: Original strand, 35853851 - 35853883
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    |||||||||||||||||||||||||||||||||    
T  35853851 tctcttgggttgggaaacattgtaaacaccttg 35853883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 48
Target Start/End: Complemental strand, 38671454 - 38671422
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    |||||||||||||||||||||||||||||||||    
T  38671454 tctcttgggttgggaaacattgtaaacaccttg 38671422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 48
Target Start/End: Original strand, 39731313 - 39731345
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    |||||||||||||||||||||||||||||||||    
T  39731313 tctcttgggttgggaaacattgtaaacaccttg 39731345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 48
Target Start/End: Complemental strand, 41317666 - 41317634
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    |||||||||||||||||||||||||||||||||    
T  41317666 tctcttgggttgggaaacattgtaaacaccttg 41317634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 48
Target Start/End: Complemental strand, 41649242 - 41649210
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    |||||||||||||||||||||||||||||||||    
T  41649242 tctcttgggttgggaaacattgtaaacaccttg 41649210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 48
Target Start/End: Original strand, 43864180 - 43864212
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    |||||||||||||||||||||||||||||||||    
T  43864180 tctcttgggttgggaaacattgtaaacaccttg 43864212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 48
Target Start/End: Complemental strand, 47676368 - 47676336
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    |||||||||||||||||||||||||||||||||    
T  47676368 tctcttgggttgggaaacattgtaaacaccttg 47676336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 48
Target Start/End: Original strand, 48408739 - 48408771
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    |||||||||||||||||||||||||||||||||    
T  48408739 tctcttgggttgggaaacattgtaaacaccttg 48408771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 48
Target Start/End: Original strand, 48489367 - 48489399
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    |||||||||||||||||||||||||||||||||    
T  48489367 tctcttgggttgggaaacattgtaaacaccttg 48489399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 233
Target Start/End: Complemental strand, 19992408 - 19992359
Alignment:
Q  183 tcttgtaactctttgtaacactttcatcatagtggattggagagctgctct 233  Q
    |||||||||  ||||||||||||||| |||| |||||||||||||||||||    
T  19992408 tcttgtaaccttttgtaacactttca-catattggattggagagctgctct 19992359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 233
Target Start/End: Original strand, 24024316 - 24024365
Alignment:
Q  183 tcttgtaactctttgtaacactttcatcatagtggattggagagctgctct 233  Q
    |||||||||  |||||||||||||| ||||| |||||||||||||||||||    
T  24024316 tcttgtaacattttgtaacactttc-tcatattggattggagagctgctct 24024365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 233
Target Start/End: Original strand, 31109573 - 31109622
Alignment:
Q  183 tcttgtaactctttgtaacactttcatcatagtggattggagagctgctct 233  Q
    |||||||||  |||||||||||||| ||||| |||||||||||||||||||    
T  31109573 tcttgtaaccttttgtaacactttc-tcatattggattggagagctgctct 31109622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 233
Target Start/End: Original strand, 24261302 - 24261362
Alignment:
Q  173 taagctaatttcttgtaactcttt-gtaacactttcatcatagtggattggagagctgctct 233  Q
    |||||||  ||||||||||||||| ||||||| |||| |||| |||||||||||||||||||    
T  24261302 taagctagattcttgtaactcttttgtaacacattca-catattggattggagagctgctct 24261362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 233
Target Start/End: Original strand, 24266181 - 24266241
Alignment:
Q  173 taagctaatttcttgtaactcttt-gtaacactttcatcatagtggattggagagctgctct 233  Q
    |||||||  ||||||||||||||| ||||||| |||| |||| |||||||||||||||||||    
T  24266181 taagctagattcttgtaactcttttgtaacacattca-catattggattggagagctgctct 24266241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 48
Target Start/End: Original strand, 1113593 - 1113625
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    |||||||||||||||||||||||||||| ||||    
T  1113593 tctcttgggttgggaaacattgtaaacaacttg 1113625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 44
Target Start/End: Complemental strand, 2761534 - 2761506
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacac 44  Q
    |||||||||||||||||||||||||||||    
T  2761534 tctcttgggttgggaaacattgtaaacac 2761506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 48
Target Start/End: Complemental strand, 4538772 - 4538740
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    ||||||||||||||||| |||||||||||||||    
T  4538772 tctcttgggttgggaaaaattgtaaacaccttg 4538740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 44
Target Start/End: Original strand, 8153278 - 8153306
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacac 44  Q
    |||||||||||||||||||||||||||||    
T  8153278 tctcttgggttgggaaacattgtaaacac 8153306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 48
Target Start/End: Complemental strand, 12098091 - 12098059
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    |||||||||||||||||||||||||||| ||||    
T  12098091 tctcttgggttgggaaacattgtaaacatcttg 12098059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 48
Target Start/End: Complemental strand, 14070065 - 14070033
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    |||||||||||||| ||||||||||||||||||    
T  14070065 tctcttgggttgggtaacattgtaaacaccttg 14070033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 48
Target Start/End: Complemental strand, 14380093 - 14380061
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    |||||||||||||| ||||||||||||||||||    
T  14380093 tctcttgggttgggtaacattgtaaacaccttg 14380061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 48
Target Start/End: Original strand, 23554976 - 23555008
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    ||||||| |||||||||||||||||||||||||    
T  23554976 tctcttgagttgggaaacattgtaaacaccttg 23555008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 48
Target Start/End: Complemental strand, 24526129 - 24526097
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    |||||| ||||||||||||||||||||||||||    
T  24526129 tctcttaggttgggaaacattgtaaacaccttg 24526097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 48
Target Start/End: Original strand, 25615799 - 25615831
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    ||||||||||||| |||||||||||||||||||    
T  25615799 tctcttgggttggaaaacattgtaaacaccttg 25615831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 48
Target Start/End: Original strand, 26417252 - 26417284
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    |||||||| ||||||||||||||||||||||||    
T  26417252 tctcttggattgggaaacattgtaaacaccttg 26417284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 48
Target Start/End: Complemental strand, 47674175 - 47674143
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    ||||||||||||| |||||||||||||||||||    
T  47674175 tctcttgggttggaaaacattgtaaacaccttg 47674143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 44
Target Start/End: Original strand, 48491515 - 48491543
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacac 44  Q
    |||||||||||||||||||||||||||||    
T  48491515 tctcttgggttgggaaacattgtaaacac 48491543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 133; Significance: 4e-69; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 8235 - 8470
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatcaaaagtttccttttgttttttct 100  Q
    ||||||||| || ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| ||||| |||||||||| | ||||    
T  8235 tctttgtagtgaggatctcttgggttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggattaaaagcttccttttgtgtcttct 8334  T
Q  101 c--ttaggattcattattgagagtgtaggtaacacaaatgggtagaaattagatattgctcttgtgtaagtttctaagcta-atttcttgtaactctttg 197  Q
    |  ||||| |||||||||||||| || || |||||||||  ||||||||||| | ||| ||||||||||| ||  ||||||  |||||||||||||||||    
T  8335 cttttagggttcattattgagagagtgggaaacacaaatacgtagaaattaggtcttgttcttgtgtaagcttgcaagctatttttcttgtaactctttg 8434  T
Q  198 taacactttcatcatagtggattggagagctgctct 233  Q
    ||||||||||||||||||||||||||||||||||||    
T  8435 taacactttcatcatagtggattggagagctgctct 8470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 131; Significance: 6e-68; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 85962 - 85729
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatcaaaagtttccttttgt-tttttc 99  Q
    ||||||||| || ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| |||||||||||  |||||||||| ||||||    
T  85962 tctttgtagtgaggatctcttgggttgggaaacattgtaaacactttgggtagtgagatttcaccattggaaggatcaaaaacttccttttgtgtttttc 85863  T
Q  100 tcttaggattcattattgagagtgtaggtaacac-aaatgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaactctttgt 198  Q
    |||||| ||||| ||||| | | || ||  |||| ||||||||||||||||| | ||||||||||||||| || ||||||||||||||||||||||||||    
T  85862 tcttagaattca-tattgtgggagtgggagacacaaaatgggtagaaattaggtcttgctcttgtgtaagcttttaagctaatttcttgtaactctttgt 85764  T
Q  199 aacactttcatcatagtggattggagagctgctct 233  Q
    |||||||||||||| |||||||||||||| |||||    
T  85763 aacactttcatcatggtggattggagagccgctct 85729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 94; Significance: 7e-46; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 22 - 233
Target Start/End: Complemental strand, 10989 - 10775
Alignment:
Q  22 gggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatcaaaa-gtttccttttgtt-ttttctcttaggattcat-tattga 118  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| | ||| ||||  | |||||||||||||||||| |  |||    
T  10989 gggttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaaagcttcttttttctgttttctcttaggattcatatcatga 10890  T
Q  119 gagtgtaggtaacacaaa-tgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaactcttt-gtaacactttcatcatagtg 216  Q
    |||||  ||| ||||||| | | |||||||||| | ||| ||||||||||| || ||| |||||||||||||||||||| |||||||||||||| |||||    
T  10889 gagtg--ggtgacacaaaatagatagaaattaggtcttgttcttgtgtaagcttgtaaactaatttcttgtaactcttttgtaacactttcatcttagtg 10792  T
Q  217 gattggagagctgctct 233  Q
    |||||||||||||||||    
T  10791 gattggagagctgctct 10775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 93; Significance: 3e-45; HSPs: 2)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 17766 - 18003
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaa--cattgtaaacaccttgcgtagtgagatttcaccattgaaaggatcaaaagtttccttttgtttttt 98  Q
    |||||||||||| |||||||||||||||||||  |||||||| ||||||| |||||||||||||||||||| ||||||| |||| ||||| |||| | ||    
T  17766 tctttgtagagaggatctcttgggttgggaaaaacattgtaatcaccttgggtagtgagatttcaccattggaaggatctaaagcttcctcttgtgtctt 17865  T
Q  99 ctc--ttaggattcat-tattgagagtgtaggtaacacaaatgggtagaaattagatattgctcttgtgtaagtttctaagcta-atttcttgtaactct 194  Q
    |||  ||||| ||||| |  ||||||||  || |||||||||||||||||| ||    ||| ||||||||||| ||  ||||||  ||||||||||| ||    
T  17866 ctcttttagggttcatattgtgagagtg-gggaaacacaaatgggtagaaactatgacttgttcttgtgtaagcttgcaagctatttttcttgtaaccct 17964  T
Q  195 ttgtaacactttcatcatagtggattggagagctgctct 233  Q
    |||||||||||||||||||||||||||||||||||||||    
T  17965 ttgtaacactttcatcatagtggattggagagctgctct 18003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188; HSP #2
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 23859 - 24096
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaa--cattgtaaacaccttgcgtagtgagatttcaccattgaaaggatcaaaagtttccttttgtttttt 98  Q
    |||||||||||| |||||||||||||||||||  |||||||| ||||||| |||||||||||||||||||| ||||||| |||| ||||| |||| | ||    
T  23859 tctttgtagagaggatctcttgggttgggaaaaacattgtaatcaccttgggtagtgagatttcaccattggaaggatctaaagcttcctcttgtgtctt 23958  T
Q  99 ctc--ttaggattcat-tattgagagtgtaggtaacacaaatgggtagaaattagatattgctcttgtgtaagtttctaagcta-atttcttgtaactct 194  Q
    |||  ||||| ||||| |  ||||||||  || |||||||||||||||||| ||    ||| ||||||||||| ||  ||||||  ||||||||||| ||    
T  23959 ctcttttagggttcatattgtgagagtg-gggaaacacaaatgggtagaaactatgacttgttcttgtgtaagcttgcaagctatttttcttgtaaccct 24057  T
Q  195 ttgtaacactttcatcatagtggattggagagctgctct 233  Q
    |||||||||||||||||||||||||||||||||||||||    
T  24058 ttgtaacactttcatcatagtggattggagagctgctct 24096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 90; Significance: 2e-43; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 17530 - 17309
Alignment:
Q  1 tctttgtagagatgatctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatcaaaagtttccttttgttttttct 100  Q
    ||||||||| |  |||||||||| |||||||||||||||||||||||| ||||||||||||||||          ||||||  |||||||||| ||||||    
T  17530 tctttgtagtggagatctcttggattgggaaacattgtaaacaccttgggtagtgagatttcacc----------tcaaaaacttccttttgtgttttct 17441  T
Q  101 cttaggattcattattgagagtgtaggtaacacaaa-tgggtagaaattagatattgctcttgtgtaagtttctaagctaatttcttgtaactc-tttgt 198  Q
    ||||||||||||||   |||||||  || ||||||| | |||||||||||| | ||| ||||||||||| || ||||||||||||||||||||| |||||    
T  17440 cttaggattcatta---agagtgtgagtgacacaaaataggtagaaattaggtcttgttcttgtgtaagcttataagctaatttcttgtaactcttttgt 17344  T
Q  199 aacactttcatcatagtggattggagagctgctct 233  Q
    ||||||||||||||| |||||||||| | ||||||    
T  17343 aacactttcatcataatggattggagggttgctct 17309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 69; Significance: 6e-31; HSPs: 2)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 3 - 103
Target Start/End: Complemental strand, 45475 - 45375
Alignment:
Q  3 tttgtagagatgatctcttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatcaaaagtttccttttgttttttctct 102  Q
    ||||||| || |||||||||||||| |||||||||||||||||||| |||||||||||||||||||| |||||||||||| |||||||||| | ||||||    
T  45475 tttgtagtgaggatctcttgggttgtgaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaagcttccttttgtgtcttctct 45376  T
Q  103 t 103  Q
    |    
T  45375 t 45375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 233
Target Start/End: Complemental strand, 45337 - 45299
Alignment:
Q  195 ttgtaacactttcatcatagtggattggagagctgctct 233  Q
    ||||||| |||||||||||||||||||||||||||||||    
T  45337 ttgtaacgctttcatcatagtggattggagagctgctct 45299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 20 - 113
Target Start/End: Complemental strand, 23792 - 23697
Alignment:
Q  20 ttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattgaaaggatcaaaa--gtttccttttgttttttctcttaggattcatt 113  Q
    ||||||||| ||| ||||||| ||||||| |||||||||| ||||||||  |||||| ||||  |  || |||||| |||||||||||||||||||    
T  23792 ttgggttggaaaaaattgtaatcaccttgggtagtgagatgtcaccattagaaggataaaaaaggcatcattttgtgttttctcttaggattcatt 23697  T

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Target: scaffold1519 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold1519
Description:

Target: scaffold1519; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 48
Target Start/End: Original strand, 853 - 885
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    |||||||||||||||||||||||||||||||||    
T  853 tctcttgggttgggaaacattgtaaacaccttg 885  T

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Target: scaffold0491 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 48
Target Start/End: Complemental strand, 11393 - 11361
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    |||||||||||||||||||||||||||||||||    
T  11393 tctcttgggttgggaaacattgtaaacaccttg 11361  T

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Target: scaffold0491; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 48
Target Start/End: Complemental strand, 8967 - 8935
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    |||||||||||||||||||||||||| ||||||    
T  8967 tctcttgggttgggaaacattgtaaagaccttg 8935  T

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Target: scaffold0016 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 48
Target Start/End: Original strand, 114539 - 114571
Alignment:
Q  16 tctcttgggttgggaaacattgtaaacaccttg 48  Q
    |||||||||||||||||||||||||||||||||    
T  114539 tctcttgggttgggaaacattgtaaacaccttg 114571  T

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Target: scaffold0355 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0355
Description:

Target: scaffold0355; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 233
Target Start/End: Original strand, 9632 - 9681
Alignment:
Q  183 tcttgtaactctttgtaacactttcatcatagtggattggagagctgctct 233  Q
    |||||||||  |||||||||||||| ||||| |||||||||||||||||||    
T  9632 tcttgtaaccttttgtaacactttc-tcatattggattggagagctgctct 9681  T

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Target: scaffold0197 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 233
Target Start/End: Original strand, 14288 - 14348
Alignment:
Q  173 taagctaatttcttgtaactcttt-gtaacactttcatcatagtggattggagagctgctct 233  Q
    |||||||  ||||||||||||||| ||||||| |||| |||| |||||||||||||||||||    
T  14288 taagctagattcttgtaactcttttgtaacacattca-catattggattggagagctgctct 14348  T

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