View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1125_low_70 (Length: 306)
Name: NF1125_low_70
Description: NF1125
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1125_low_70 |
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Alignment Details
Target: chr8 (Bit Score: 238; Significance: 1e-132; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 13 - 278
Target Start/End: Complemental strand, 32499596 - 32499331
Alignment:
| Q |
13 |
aatatatattgcttaaacttaattgttttattatttgaatgatgattaatttgtactcaaaagtcaaaacaatgttactatttttagaatattcactaca |
112 |
Q |
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| T |
32499596 |
aatatatattgcttaaacttaattgttttattatttgaatgatgattaatttgtactcaaaagtcaaaacaatgttactatttttagaatattcactaca |
32499497 |
T |
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| Q |
113 |
aagtatatgcatgtataatttaaaaagaaatgtgtctagttaaattgagaatgagaagcataatactatcaaagatagagacttttctgaggttgccata |
212 |
Q |
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||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| |
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| T |
32499496 |
aagtatatgaatgtataatttaaaaagaaatgtgtctagttaaattgagaatgagcagcataatactatcaaagatagagacttttcaaaggttgccata |
32499397 |
T |
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| Q |
213 |
aaataaaataatgatcaaaagaaggggaaggaagtgttgctcaagcaaaaagaagatgctgccatt |
278 |
Q |
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|||||||| |||||| ||||||||||||||||||||||||||||||||||||| |||||||||||| |
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| T |
32499396 |
aaataaaacaatgataaaaagaaggggaaggaagtgttgctcaagcaaaaagatgatgctgccatt |
32499331 |
T |
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