View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1125_low_71 (Length: 305)

Name: NF1125_low_71
Description: NF1125
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1125_low_71
NF1125_low_71
[»] chr4 (84 HSPs)
chr4 (8-276)||(6232878-6233148)
chr4 (8-276)||(23308828-23309098)
chr4 (13-276)||(10155533-10155797)
chr4 (8-276)||(46095436-46095705)
chr4 (8-276)||(13395219-13395488)
chr4 (13-230)||(23272480-23272700)
chr4 (8-276)||(47030255-47030527)
chr4 (8-276)||(615908-616176)
chr4 (69-276)||(796413-796622)
chr4 (13-156)||(23265254-23265398)
chr4 (8-255)||(7165852-7166102)
chr4 (13-254)||(12251135-12251375)
chr4 (87-276)||(8192844-8193035)
chr4 (13-257)||(23721428-23721671)
chr4 (13-276)||(16960235-16960498)
chr4 (27-156)||(32448424-32448551)
chr4 (13-155)||(44664961-44665102)
chr4 (8-276)||(17729541-17729810)
chr4 (33-251)||(9784641-9784860)
chr4 (13-200)||(21037734-21037920)
chr4 (8-228)||(16191729-16191948)
chr4 (16-156)||(26618982-26619121)
chr4 (13-200)||(6233564-6233756)
chr4 (8-276)||(19313791-19314058)
chr4 (8-251)||(55069289-55069534)
chr4 (8-251)||(33032215-33032458)
chr4 (8-148)||(36408333-36408471)
chr4 (8-148)||(36422499-36422637)
chr4 (69-152)||(53102254-53102336)
chr4 (13-276)||(33047012-33047274)
chr4 (27-251)||(7478725-7478952)
chr4 (69-276)||(37708805-37709015)
chr4 (16-275)||(55139382-55139642)
chr4 (87-275)||(37423811-37423998)
chr4 (14-276)||(45847165-45847428)
chr4 (8-250)||(49702432-49702672)
chr4 (90-251)||(50824683-50824845)
chr4 (8-59)||(56309858-56309909)
chr4 (165-276)||(4950529-4950640)
chr4 (13-156)||(10555745-10555886)
chr4 (95-276)||(37423173-37423352)
chr4 (69-156)||(29979550-29979632)
chr4 (69-266)||(36897498-36897694)
chr4 (87-156)||(7851865-7851929)
chr4 (113-276)||(36651150-36651314)
chr4 (69-156)||(36687787-36687873)
chr4 (89-156)||(4964442-4964508)
chr4 (69-156)||(29429193-29429274)
chr4 (95-154)||(51020165-51020223)
chr4 (87-276)||(17722780-17722967)
chr4 (165-276)||(30192539-30192650)
chr4 (87-156)||(25009540-25009608)
chr4 (69-156)||(36687332-36687417)
chr4 (87-251)||(42074287-42074450)
chr4 (87-276)||(721352-721544)
chr4 (13-151)||(26808832-26808970)
chr4 (120-192)||(56309953-56310027)
chr4 (87-156)||(26705556-26705623)
chr4 (86-156)||(46076828-46076897)
chr4 (13-192)||(53306124-53306304)
chr4 (165-247)||(55814375-55814457)
chr4 (87-257)||(19854659-19854830)
chr4 (93-156)||(4649560-4649623)
chr4 (113-156)||(6232470-6232513)
chr4 (69-156)||(13771870-13771951)
chr4 (90-152)||(54092330-54092393)
chr4 (114-156)||(7165445-7165487)
chr4 (114-156)||(12250723-12250765)
chr4 (114-156)||(13392735-13392777)
chr4 (114-156)||(13395874-13395916)
chr4 (83-150)||(20544401-20544466)
chr4 (165-276)||(35667690-35667801)
chr4 (114-156)||(46096103-46096145)
chr4 (114-156)||(46138604-46138646)
chr4 (122-156)||(51267822-51267856)
chr4 (27-56)||(7479580-7479609)
chr4 (239-276)||(17730188-17730225)
chr4 (87-148)||(30558661-30558722)
chr4 (127-156)||(33046609-33046638)
chr4 (165-250)||(755460-755545)
chr4 (166-198)||(8138327-8138359)
chr4 (8-48)||(12267783-12267823)
chr4 (96-156)||(28464347-28464406)
chr4 (208-276)||(35667260-35667328)
[»] chr3 (80 HSPs)
chr3 (8-276)||(10887742-10888012)
chr3 (8-276)||(4757027-4757295)
chr3 (13-275)||(22129720-22129983)
chr3 (8-276)||(37183110-37183379)
chr3 (8-276)||(4558064-4558333)
chr3 (8-276)||(22524150-22524420)
chr3 (8-276)||(14601883-14602154)
chr3 (8-276)||(23309394-23309664)
chr3 (24-230)||(24542773-24542979)
chr3 (69-275)||(11055824-11056033)
chr3 (83-276)||(32737020-32737215)
chr3 (8-251)||(54404008-54404250)
chr3 (69-156)||(41865520-41865607)
chr3 (24-230)||(44499408-44499614)
chr3 (13-251)||(1363439-1363676)
chr3 (8-156)||(27394847-27394997)
chr3 (7-155)||(27397295-27397442)
chr3 (69-276)||(54606256-54606468)
chr3 (13-192)||(11581983-11582163)
chr3 (8-276)||(40974068-40974332)
chr3 (69-251)||(6293263-6293445)
chr3 (8-260)||(45241618-45241871)
chr3 (69-276)||(48223977-48224181)
chr3 (27-156)||(19546822-19546952)
chr3 (13-276)||(2756398-2756651)
chr3 (8-156)||(40035893-40036039)
chr3 (8-276)||(40927525-40927793)
chr3 (71-156)||(45307194-45307280)
chr3 (10-156)||(291561-291705)
chr3 (27-156)||(19562468-19562600)
chr3 (14-156)||(22517116-22517256)
chr3 (83-276)||(3089782-3089974)
chr3 (87-276)||(11344723-11344912)
chr3 (69-156)||(33314221-33314308)
chr3 (72-251)||(18480153-18480336)
chr3 (89-251)||(5963114-5963276)
chr3 (73-200)||(25481039-25481164)
chr3 (13-152)||(30604833-30604970)
chr3 (72-276)||(1763675-1763877)
chr3 (69-227)||(16067734-16067890)
chr3 (69-156)||(20030057-20030142)
chr3 (13-59)||(41865439-41865485)
chr3 (87-152)||(32221761-32221822)
chr3 (87-155)||(32255579-32255646)
chr3 (69-276)||(49764522-49764726)
chr3 (10-152)||(8449252-8449399)
chr3 (8-54)||(11056138-11056184)
chr3 (87-156)||(25259794-25259861)
chr3 (165-251)||(11581893-11581979)
chr3 (95-153)||(14600891-14600947)
chr3 (87-276)||(18365131-18365325)
chr3 (13-59)||(11388853-11388899)
chr3 (87-154)||(27255825-27255894)
chr3 (87-156)||(30128118-30128188)
chr3 (88-150)||(32373890-32373951)
chr3 (166-257)||(43184706-43184797)
chr3 (165-276)||(48841547-48841658)
chr3 (69-156)||(1780566-1780652)
chr3 (87-156)||(5984793-5984861)
chr3 (69-156)||(27638629-27638711)
chr3 (166-251)||(10689396-10689481)
chr3 (208-276)||(25259914-25259982)
chr3 (72-156)||(41586798-41586876)
chr3 (87-276)||(1262913-1263103)
chr3 (113-156)||(11056542-11056585)
chr3 (24-59)||(11397457-11397492)
chr3 (109-156)||(37183738-37183785)
chr3 (114-156)||(10888387-10888429)
chr3 (114-156)||(22130380-22130422)
chr3 (114-156)||(22524784-22524826)
chr3 (114-156)||(24542361-24542403)
chr3 (122-156)||(27393084-27393118)
chr3 (111-251)||(28248032-28248174)
chr3 (98-156)||(54876792-54876849)
chr3 (111-156)||(4558719-4558764)
chr3 (115-156)||(41865028-41865069)
chr3 (114-150)||(14601482-14601518)
chr3 (120-156)||(23308987-23309023)
chr3 (13-49)||(27393347-27393383)
chr3 (90-156)||(47794137-47794200)
[»] chr2 (64 HSPs)
chr2 (13-276)||(34247843-34248107)
chr2 (8-275)||(35899168-35899437)
chr2 (8-276)||(20894054-20894325)
chr2 (13-276)||(552288-552552)
chr2 (8-275)||(38972494-38972763)
chr2 (13-276)||(16110945-16111211)
chr2 (13-255)||(43656958-43657204)
chr2 (15-251)||(43439183-43439418)
chr2 (8-251)||(4437366-4437608)
chr2 (16-251)||(11051613-11051850)
chr2 (8-156)||(6077819-6077963)
chr2 (13-272)||(41077943-41078199)
chr2 (69-276)||(34173075-34173280)
chr2 (13-276)||(17829080-17829343)
chr2 (13-156)||(28167994-28168137)
chr2 (8-276)||(5113632-5113901)
chr2 (8-192)||(42791595-42791778)
chr2 (8-251)||(20125940-20126181)
chr2 (72-156)||(31709575-31709659)
chr2 (87-251)||(33146557-33146722)
chr2 (87-154)||(16599677-16599742)
chr2 (8-149)||(32023561-32023698)
chr2 (13-59)||(11942465-11942511)
chr2 (13-156)||(33886445-33886586)
chr2 (87-156)||(64465-64531)
chr2 (87-156)||(35657487-35657555)
chr2 (89-251)||(40020614-40020774)
chr2 (13-59)||(8726867-8726913)
chr2 (13-156)||(10356913-10357052)
chr2 (69-276)||(3044957-3045165)
chr2 (72-152)||(3514959-3515038)
chr2 (69-275)||(11796170-11796377)
chr2 (86-156)||(13873466-13873538)
chr2 (86-156)||(14013591-14013663)
chr2 (91-197)||(26196739-26196842)
chr2 (69-148)||(32875656-32875731)
chr2 (111-156)||(34247431-34247476)
chr2 (7-276)||(37330143-37330419)
chr2 (208-276)||(7939970-7940038)
chr2 (165-200)||(44332185-44332220)
chr2 (69-156)||(18467928-18468010)
chr2 (13-59)||(41521450-41521496)
chr2 (165-251)||(15006484-15006570)
chr2 (87-156)||(39160239-39160307)
chr2 (87-156)||(39208887-39208955)
chr2 (165-230)||(32023722-32023787)
chr2 (122-268)||(41521556-41521704)
chr2 (113-156)||(551874-551917)
chr2 (83-154)||(31597670-31597736)
chr2 (113-156)||(43657575-43657618)
chr2 (122-156)||(5790908-5790942)
chr2 (87-153)||(14736671-14736735)
chr2 (82-156)||(22606467-22606540)
chr2 (114-156)||(35899802-35899844)
chr2 (87-154)||(37009148-37009211)
chr2 (69-251)||(37198978-37199165)
chr2 (114-156)||(38973128-38973170)
chr2 (87-154)||(18997048-18997112)
chr2 (95-156)||(31364045-31364105)
chr2 (72-117)||(36143724-36143769)
chr2 (208-276)||(10357097-10357165)
chr2 (167-251)||(11470427-11470512)
chr2 (13-53)||(34831201-34831241)
chr2 (216-276)||(36451613-36451673)
[»] scaffold0105 (1 HSPs)
scaffold0105 (8-276)||(19420-19691)
[»] chr6 (60 HSPs)
chr6 (8-276)||(14873047-14873317)
chr6 (13-276)||(9240888-9241153)
chr6 (8-276)||(25527759-25528028)
chr6 (8-276)||(188209-188478)
chr6 (8-276)||(12025973-12026242)
chr6 (69-276)||(12032953-12033162)
chr6 (24-276)||(3767537-3767791)
chr6 (8-276)||(11522829-11523095)
chr6 (8-276)||(5443040-5443309)
chr6 (8-192)||(34709340-34709525)
chr6 (91-276)||(25577059-25577246)
chr6 (91-275)||(34280539-34280725)
chr6 (13-230)||(4100595-4100815)
chr6 (13-230)||(4125957-4126178)
chr6 (98-276)||(7127522-7127702)
chr6 (8-156)||(10702415-10702562)
chr6 (13-156)||(22268559-22268697)
chr6 (69-256)||(31281662-31281852)
chr6 (13-155)||(14223983-14224124)
chr6 (8-276)||(6936404-6936673)
chr6 (13-276)||(32113768-32114032)
chr6 (69-276)||(34794359-34794567)
chr6 (69-276)||(31881870-31882079)
chr6 (13-156)||(7448675-7448818)
chr6 (69-156)||(17336976-17337061)
chr6 (69-276)||(2091717-2091924)
chr6 (8-156)||(28494668-28494814)
chr6 (8-156)||(29807077-29807223)
chr6 (95-200)||(2655448-2655552)
chr6 (13-156)||(30461891-30462039)
chr6 (87-156)||(2523191-2523260)
chr6 (87-192)||(12767049-12767154)
chr6 (87-156)||(33276268-33276332)
chr6 (8-59)||(25576995-25577046)
chr6 (83-156)||(34250210-34250280)
chr6 (8-59)||(34280472-34280523)
chr6 (8-100)||(2661579-2661672)
chr6 (87-152)||(5916589-5916651)
chr6 (8-51)||(7127452-7127495)
chr6 (165-200)||(22022077-22022112)
chr6 (69-156)||(11721451-11721535)
chr6 (124-276)||(17311989-17312143)
chr6 (165-276)||(33950255-33950366)
chr6 (111-156)||(12025565-12025610)
chr6 (166-276)||(21801968-21802078)
chr6 (13-58)||(28023814-28023859)
chr6 (165-251)||(32003797-32003883)
chr6 (90-251)||(32522362-32522523)
chr6 (111-156)||(34709898-34709943)
chr6 (70-156)||(28023708-28023800)
chr6 (113-156)||(187818-187861)
chr6 (8-59)||(2655379-2655430)
chr6 (69-131)||(24620082-24620141)
chr6 (165-200)||(32131042-32131077)
chr6 (114-156)||(9241523-9241565)
chr6 (114-156)||(11523461-11523503)
chr6 (114-156)||(27923733-27923775)
chr6 (69-156)||(14313697-14313780)
chr6 (111-156)||(34280064-34280109)
chr6 (208-276)||(14313826-14313894)
[»] chr8 (61 HSPs)
chr8 (8-276)||(14363807-14364078)
chr8 (13-276)||(29636170-29636431)
chr8 (8-276)||(6292546-6292814)
chr8 (8-276)||(10215911-10216180)
chr8 (8-275)||(8297578-8297846)
chr8 (8-276)||(25598233-25598502)
chr8 (13-276)||(22934321-22934588)
chr8 (74-276)||(25485267-25485471)
chr8 (8-156)||(37872351-37872496)
chr8 (8-276)||(3075338-3075609)
chr8 (13-251)||(8627832-8628071)
chr8 (8-156)||(40791536-40791678)
chr8 (13-156)||(12331020-12331165)
chr8 (13-276)||(36016121-36016385)
chr8 (69-276)||(31846479-31846687)
chr8 (8-156)||(44147402-44147553)
chr8 (110-250)||(10674340-10674482)
chr8 (69-251)||(17565176-17565358)
chr8 (33-156)||(30991272-30991393)
chr8 (72-276)||(41311702-41311908)
chr8 (69-256)||(24810097-24810281)
chr8 (80-229)||(41262611-41262762)
chr8 (88-276)||(34679780-34679969)
chr8 (69-156)||(42861598-42861683)
chr8 (69-276)||(4855290-4855500)
chr8 (16-197)||(11140205-11140390)
chr8 (13-148)||(13573344-13573477)
chr8 (87-276)||(32905183-32905372)
chr8 (15-156)||(37304677-37304816)
chr8 (80-200)||(21304072-21304188)
chr8 (69-255)||(14093534-14093717)
chr8 (13-156)||(33972453-33972596)
chr8 (69-251)||(34364424-34364603)
chr8 (13-59)||(25483051-25483097)
chr8 (165-276)||(39998402-39998513)
chr8 (69-156)||(40299071-40299154)
chr8 (88-156)||(30353998-30354064)
chr8 (8-103)||(43776495-43776590)
chr8 (8-59)||(41262516-41262567)
chr8 (13-90)||(17734459-17734536)
chr8 (89-156)||(44283847-44283910)
chr8 (8-57)||(10674513-10674562)
chr8 (69-156)||(32904046-32904136)
chr8 (113-156)||(33969146-33969189)
chr8 (165-276)||(3075164-3075275)
chr8 (114-156)||(15848010-15848052)
chr8 (8-49)||(4855524-4855565)
chr8 (89-251)||(8437954-8438115)
chr8 (111-156)||(25597824-25597869)
chr8 (69-156)||(37837416-37837499)
chr8 (90-251)||(13439995-13440156)
chr8 (109-156)||(10215503-10215550)
chr8 (110-275)||(13421943-13422110)
chr8 (69-150)||(14880028-14880105)
chr8 (213-276)||(24778020-24778083)
chr8 (121-156)||(34924955-34924990)
chr8 (214-276)||(6099370-6099432)
chr8 (114-156)||(8297150-8297192)
chr8 (165-276)||(11759420-11759531)
chr8 (111-156)||(22935955-22936000)
chr8 (124-156)||(25953994-25954026)
[»] chr1 (60 HSPs)
chr1 (8-276)||(38011627-38011898)
chr1 (8-276)||(1845889-1846159)
chr1 (27-276)||(41321542-41321793)
chr1 (8-255)||(25068781-25069030)
chr1 (8-230)||(1386422-1386645)
chr1 (13-156)||(52505445-52505587)
chr1 (13-276)||(8061055-8061321)
chr1 (8-230)||(25991194-25991416)
chr1 (8-275)||(19997634-19997902)
chr1 (8-257)||(31765779-31766028)
chr1 (13-276)||(18406983-18407246)
chr1 (13-276)||(49129034-49129300)
chr1 (8-273)||(47553169-47553435)
chr1 (69-276)||(43319945-43320151)
chr1 (69-276)||(16536858-16537065)
chr1 (87-276)||(51362347-51362531)
chr1 (8-276)||(28044924-28045189)
chr1 (69-156)||(38294268-38294355)
chr1 (8-156)||(15357085-15357232)
chr1 (69-156)||(18572406-18572491)
chr1 (69-156)||(33126336-33126422)
chr1 (16-249)||(45737760-45737993)
chr1 (79-264)||(20585027-20585213)
chr1 (95-276)||(27226189-27226370)
chr1 (13-156)||(11916600-11916741)
chr1 (87-191)||(44649145-44649250)
chr1 (87-251)||(45195094-45195258)
chr1 (69-276)||(27931140-27931350)
chr1 (69-156)||(25087839-25087926)
chr1 (87-257)||(44645789-44645960)
chr1 (24-156)||(13573958-13574085)
chr1 (13-156)||(27532359-27532499)
chr1 (69-276)||(23739652-23739861)
chr1 (69-276)||(36605234-36605445)
chr1 (83-156)||(47140455-47140526)
chr1 (69-156)||(7307110-7307196)
chr1 (126-276)||(17109910-17110061)
chr1 (13-156)||(51611951-51612093)
chr1 (87-276)||(50143907-50144096)
chr1 (110-156)||(12126423-12126469)
chr1 (165-276)||(29510412-29510523)
chr1 (8-156)||(47216501-47216646)
chr1 (165-275)||(794681-794791)
chr1 (8-156)||(45559247-45559393)
chr1 (165-276)||(2275716-2275827)
chr1 (13-59)||(37419255-37419301)
chr1 (165-276)||(42830567-42830678)
chr1 (87-156)||(6645010-6645078)
chr1 (111-156)||(25068373-25068418)
chr1 (69-156)||(47291722-47291806)
chr1 (72-156)||(7842164-7842247)
chr1 (108-156)||(41322173-41322221)
chr1 (69-156)||(1114362-1114446)
chr1 (113-156)||(25813070-25813113)
chr1 (13-156)||(1116889-1117031)
chr1 (94-156)||(35503295-35503356)
chr1 (89-154)||(36511555-36511618)
chr1 (112-156)||(1386013-1386057)
chr1 (112-156)||(38011219-38011263)
chr1 (69-150)||(45738506-45738582)
[»] chr5 (64 HSPs)
chr5 (8-276)||(20540330-20540599)
chr5 (8-255)||(9118886-9119133)
chr5 (8-276)||(37334362-37334632)
chr5 (8-276)||(37657850-37658119)
chr5 (8-255)||(20691571-20691821)
chr5 (8-255)||(4054777-4055026)
chr5 (13-156)||(24625276-24625417)
chr5 (69-187)||(1198982-1199100)
chr5 (13-156)||(18524144-18524286)
chr5 (8-276)||(4877154-4877419)
chr5 (87-251)||(8007116-8007279)
chr5 (69-156)||(15175362-15175447)
chr5 (87-276)||(20183390-20183581)
chr5 (69-276)||(19408569-19408772)
chr5 (13-230)||(36762565-36762782)
chr5 (13-276)||(27979683-27979944)
chr5 (13-156)||(3933458-3933600)
chr5 (69-156)||(25214658-25214743)
chr5 (13-276)||(40957197-40957459)
chr5 (8-156)||(30920664-30920807)
chr5 (87-276)||(32458366-32458557)
chr5 (8-59)||(1198892-1198943)
chr5 (8-156)||(13279924-13280069)
chr5 (69-156)||(25278808-25278894)
chr5 (95-276)||(31476826-31477009)
chr5 (94-156)||(42598850-42598910)
chr5 (87-228)||(10402010-10402150)
chr5 (8-156)||(21687508-21687654)
chr5 (73-156)||(30782865-30782942)
chr5 (69-156)||(36854029-36854112)
chr5 (8-251)||(40027272-40027519)
chr5 (87-276)||(9017677-9017865)
chr5 (88-153)||(32347960-32348025)
chr5 (69-276)||(35751546-35751749)
chr5 (8-156)||(1405734-1405877)
chr5 (73-200)||(38497871-38497996)
chr5 (89-156)||(31850520-31850583)
chr5 (87-156)||(1931427-1931491)
chr5 (69-146)||(10688097-10688172)
chr5 (87-154)||(17780872-17780934)
chr5 (121-156)||(22730538-22730573)
chr5 (165-276)||(6031282-6031393)
chr5 (120-276)||(6048015-6048173)
chr5 (111-156)||(1198480-1198525)
chr5 (111-156)||(4055389-4055434)
chr5 (111-156)||(20691163-20691208)
chr5 (8-57)||(27302105-27302154)
chr5 (69-156)||(5138447-5138531)
chr5 (87-276)||(21639048-21639237)
chr5 (90-155)||(2554101-2554165)
chr5 (113-156)||(9119530-9119573)
chr5 (80-154)||(12586124-12586194)
chr5 (113-156)||(13686499-13686542)
chr5 (13-59)||(8438189-8438235)
chr5 (98-156)||(14594608-14594666)
chr5 (114-156)||(37657430-37657472)
chr5 (182-276)||(1199695-1199789)
chr5 (122-155)||(15612037-15612070)
chr5 (111-156)||(20540962-20541007)
chr5 (87-148)||(1198399-1198456)
chr5 (112-156)||(15144565-15144609)
chr5 (70-110)||(15611989-15612029)
chr5 (208-276)||(20570804-20570872)
chr5 (108-156)||(37333952-37334000)
[»] chr7 (66 HSPs)
chr7 (8-276)||(25286-25558)
chr7 (25-276)||(25607403-25607656)
chr7 (13-276)||(29823360-29823624)
chr7 (8-276)||(2146066-2146336)
chr7 (8-276)||(317308-317578)
chr7 (8-276)||(6184682-6184950)
chr7 (8-276)||(38670456-38670728)
chr7 (15-276)||(40343788-40344049)
chr7 (8-276)||(5228420-5228683)
chr7 (8-251)||(5951706-5951950)
chr7 (8-200)||(32867676-32867871)
chr7 (8-251)||(23742437-23742678)
chr7 (13-275)||(27144212-27144479)
chr7 (8-190)||(1573201-1573383)
chr7 (8-230)||(39186671-39186894)
chr7 (69-155)||(28308150-28308237)
chr7 (72-276)||(30870419-30870623)
chr7 (16-276)||(34999215-34999475)
chr7 (69-200)||(29103627-29103758)
chr7 (13-156)||(23728217-23728359)
chr7 (69-156)||(29736632-29736716)
chr7 (75-156)||(33869342-33869422)
chr7 (13-156)||(2790718-2790858)
chr7 (83-251)||(43450154-43450326)
chr7 (80-156)||(3340925-3341002)
chr7 (87-276)||(40400932-40401119)
chr7 (69-156)||(19435131-19435216)
chr7 (8-59)||(26200058-26200109)
chr7 (13-156)||(14078508-14078650)
chr7 (13-156)||(14388536-14388678)
chr7 (89-156)||(20261156-20261221)
chr7 (72-250)||(29616059-29616236)
chr7 (70-200)||(32387987-32388116)
chr7 (69-156)||(31872608-31872695)
chr7 (87-156)||(22712156-22712226)
chr7 (87-276)||(42813430-42813623)
chr7 (165-275)||(11640913-11641023)
chr7 (87-156)||(22263915-22263983)
chr7 (83-156)||(8122779-8122849)
chr7 (69-156)||(19155840-19155925)
chr7 (69-156)||(20755239-20755324)
chr7 (69-156)||(36889922-36890006)
chr7 (69-156)||(48872517-48872599)
chr7 (69-156)||(48891282-48891367)
chr7 (111-156)||(2146855-2146900)
chr7 (108-156)||(317935-317983)
chr7 (113-275)||(11696751-11696914)
chr7 (69-156)||(36687448-36687532)
chr7 (13-59)||(45941903-45941950)
chr7 (87-156)||(46010603-46010669)
chr7 (114-156)||(25606973-25607015)
chr7 (114-156)||(29824013-29824055)
chr7 (95-156)||(31220950-31221009)
chr7 (165-228)||(40189001-40189064)
chr7 (165-276)||(48982472-48982583)
chr7 (165-198)||(31388165-31388198)
chr7 (69-154)||(34835313-34835394)
chr7 (70-156)||(35783514-35783602)
chr7 (87-149)||(8535321-8535380)
chr7 (208-276)||(8535410-8535478)
chr7 (165-226)||(10410716-10410777)
chr7 (120-156)||(23233377-23233413)
chr7 (120-156)||(23243038-23243074)
chr7 (122-154)||(38790629-38790661)
chr7 (15-59)||(40189203-40189247)
chr7 (87-156)||(46208730-46208795)
[»] scaffold2113 (1 HSPs)
scaffold2113 (8-276)||(756-1025)
[»] scaffold0115 (3 HSPs)
scaffold0115 (8-230)||(32757-32983)
scaffold0115 (69-156)||(31194-31278)
scaffold0115 (114-156)||(33328-33370)
[»] scaffold0004 (1 HSPs)
scaffold0004 (8-251)||(351714-351956)
[»] scaffold0340 (1 HSPs)
scaffold0340 (8-276)||(12636-12904)
[»] scaffold0533 (1 HSPs)
scaffold0533 (13-156)||(9922-10063)
[»] scaffold0036 (1 HSPs)
scaffold0036 (69-251)||(25721-25903)
[»] scaffold0361 (1 HSPs)
scaffold0361 (87-276)||(16515-16702)
[»] scaffold0068 (1 HSPs)
scaffold0068 (8-156)||(26256-26402)
[»] scaffold0695 (1 HSPs)
scaffold0695 (69-255)||(2729-2913)
[»] scaffold0022 (1 HSPs)
scaffold0022 (69-144)||(118719-118791)
[»] scaffold0368 (1 HSPs)
scaffold0368 (165-276)||(10623-10734)
[»] scaffold0102 (1 HSPs)
scaffold0102 (95-156)||(26867-26927)
[»] scaffold0712 (1 HSPs)
scaffold0712 (165-257)||(3700-3792)
[»] scaffold0709 (1 HSPs)
scaffold0709 (165-257)||(3720-3812)
[»] scaffold0289 (2 HSPs)
scaffold0289 (95-156)||(3560-3622)
scaffold0289 (208-276)||(3438-3506)
[»] scaffold0067 (1 HSPs)
scaffold0067 (114-156)||(18726-18768)
[»] scaffold0003 (1 HSPs)
scaffold0003 (126-230)||(421822-421928)
[»] scaffold0460 (1 HSPs)
scaffold0460 (115-156)||(13505-13546)


Alignment Details
Target: chr4 (Bit Score: 140; Significance: 2e-73; HSPs: 84)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 8 - 276
Target Start/End: Original strand, 6232878 - 6233148
Alignment:
Q  8 cgaagaatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnnaagtgtgttaaattattattttttgctagattattagaa 107  Q
    |||| |||||||||| ||||||||||||||||||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||    
T  6232878 cgaaaaatatgtattcaattttttattatattaaaatagacccgcaatactatttttttttaagtgtgttaaattattattttttgctagattattagaa 6232977  T
Q  108 ataataaaaaagaatattgagggagtaaagtgtagattttaacataaga--nnnnnnnnatgtaattcaagcttctcttaggggaggagagtgaannnnn 205  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||| |||||||         
T  6232978 ataataaaaaagaatattgagggagtaaagtgtagattttaacataagaggggatggagatgtaattcaagcttctcttaggggaggggagtgaaatttt 6233077  T
Q  206 nnctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagaggagagtgtaattc 276  Q
      |||| |||||||||||||||||| ||  || ||||||||||||||||| | | |||| |||||||||||    
T  6233078 ttctaatatgttttgaataagaggggaggggagtgtatattttaacttaagaggggaggggagtgtaattc 6233148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 8 - 276
Target Start/End: Complemental strand, 23309098 - 23308828
Alignment:
Q  8 cgaagaatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnnaagtgtgttaaattattattttttgctagattattagaa 107  Q
    |||| |||||||||| ||||||||||||||||||||||||||||||||||||         ||| |||||||||||||||||||||||||||||||||||    
T  23309098 cgaaaaatatgtattcaattttttattatattaaaatagacccgcaatactatttttttttaagcgtgttaaattattattttttgctagattattagaa 23308999  T
Q  108 ataataaaaaagaatattgagggagtaaagtgtagattttaacataaga--nnnnnnnnatgtaattcaagcttctcttaggggaggagagtgaannnnn 205  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||| |||||||         
T  23308998 ataataaaaaagaatattgagggagtaaagtgtagattttaacataagaggggagggggatgtaattcaagcttctcttaggggaggggagtgaaattat 23308899  T
Q  206 nnctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagaggagagtgtaattc 276  Q
      |||| |||||||||||||||||| || | | ||||||||||||||||| | | |||| |||||||||||    
T  23308898 ttctaatatgttttgaataagaggggaggaaagtgtatattttaacttaagaggggaggggagtgtaattc 23308828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 13 - 276
Target Start/End: Complemental strand, 10155797 - 10155533
Alignment:
Q  13 aatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnnaagtgtgttaaattattattttttgctagattattagaaataat 112  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||         ||||||| ||||||||||||||||||||||||||||||||||||    
T  10155797 aatatgtattcaattttttattatattaaaatagacccgcaatactatttttttt-aagtgtgataaattattattttttgctagattattagaaataat 10155699  T
Q  113 aaaaaagaatattgagggagtaaagtgtagattttaacataaga--nnnnnnnnatgtaattcaagcttctcttaggggaggagagtgaannnnnnncta 210  Q
    ||||||||||||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||| |||| |||||||       |||    
T  10155698 aaaaaagaatattgagggagtaaagtgtagattttaacataagaggggagggggatgtaattcaagcttctcttaggagaggggagtgaaattttttcta 10155599  T
Q  211 acatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagaggagagtgtaattc 276  Q
    | |||||||||||||||||| ||   | ||||||||||||||||||||| ||||||||||||||||    
T  10155598 atatgttttgaataagaggggagggaagtgtatattttaacttaaaaagggaggagagtgtaattc 10155533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 8 - 276
Target Start/End: Complemental strand, 46095705 - 46095436
Alignment:
Q  8 cgaagaatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnnaagtgtgttaaattattattttttgctagattattagaa 107  Q
    |||| |||||||||| ||||||||||||||||||||||||||||||||| ||         |||||||||||||||||||||||||||||||||||||||    
T  46095705 cgaaaaatatgtattcaattttttattatattaaaatagacccgcaataatattttttt--aagtgtgttaaattattattttttgctagattattagaa 46095608  T
Q  108 ataataaaaaagaatattgagggagtaaagtgtagattttaacataaga---nnnnnnnnatgtaattcaagcttctcttaggggaggagagtgaannnn 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||           |||||||||||||||||||||||||||| | |||||        
T  46095607 ataataaaaaagaatattgagggagtaaagtgtagattttaacataagaggggagggggaatgtaattcaagcttctcttaggggaggggggtgaaattt 46095508  T
Q  205 nnnctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagaggagagtgtaattc 276  Q
       |||| |||||||||||||||||| ||  || ||||||||||||||||| | | ||||||||||||||||    
T  46095507 tttctaatatgttttgaataagaggggaggggagtgtatattttaacttaagaggggaggagagtgtaattc 46095436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 8 - 276
Target Start/End: Complemental strand, 13395488 - 13395219
Alignment:
Q  8 cgaagaatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnnaagtgtgttaaattattattttttgctagattattagaa 107  Q
    |||| |||||||||| ||||||||||||||||||||||||||||||||| ||         |||||||||||||||||||||||||||||||||||||||    
T  13395488 cgaaaaatatgtattcaattttttattatattaaaatagacccgcaataatatttttttt-aagtgtgttaaattattattttttgctagattattagaa 13395390  T
Q  108 ataataaaaaagaatattgagggagtaaagtgtagattttaacataaga--nnnnnnnnatgtaattcaagcttctcttaggggaggagagtgaannnnn 205  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||| | |||||         
T  13395389 ataataaaaaagaatattgagggagtaaagtgtagattttaacataagaggggagggggatgtaattcaagcttctcttaggggaggggggtgaaatttt 13395290  T
Q  206 nnctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagaggagagtgtaattc 276  Q
      |||| |||||||||||||||||| ||   | ||||||||||||||||| | | |||| |||||||||||    
T  13395289 ttctaatatgttttgaataagaggggagggaagtgtatattttaacttaagaggggaggggagtgtaattc 13395219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 13 - 230
Target Start/End: Complemental strand, 23272700 - 23272480
Alignment:
Q  13 aatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnn-aagtgtgttaaattattattttttgctagattattagaaataa 111  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||||||    
T  23272700 aatatgtattcaattttttattatattaaaatagacccgcaatactattttttttttaagtgtgttaaattattattttttgctagattattagaaataa 23272601  T
Q  112 taaaaaagaatattgagggagtaaagtgtagattttaacataaga--nnnnnnnnatgtaattcaagcttctcttaggggaggagagtgaannnnnnnct 209  Q
    |||||||||||||| ||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||| |||||||       ||    
T  23272600 taaaaaagaatatttagggagtaaagtgtagattttaacataagaggggagggggatgtaattcaagcttctcttaggggaggggagtgaaattttttct 23272501  T
Q  210 aacatgttttgaataagaggg 230  Q
    || ||||||||||||||||||    
T  23272500 aatatgttttgaataagaggg 23272480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 8 - 276
Target Start/End: Original strand, 47030255 - 47030527
Alignment:
Q  8 cgaagaatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnn-aagtgtgttaaattattatttt-ttgctagattattag 105  Q
    |||| |||||||||| |||||||||||||| |||||||||||||||||||||          |||||||||||||||||||||| |||||||||||||||    
T  47030255 cgaaaaatatgtattcaattttttattatactaaaatagacccgcaatactattttttttttaagtgtgttaaattattatttttttgctagattattag 47030354  T
Q  106 aaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga--nnnnnnnnatgtaattcaagcttctcttaggggaggagagtgaannn 203  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||||||||          |||||||||||||||||||||||||||| | |||||       
T  47030355 aaataataaaaaagaatattgagagagtaaagtgtagattttgacataagaggggagggagatgtaattcaagcttctcttaggggaggggggtgaaatt 47030454  T
Q  204 nnnnctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagaggagagtgtaattc 276  Q
        |||| |||||||||||||||||| ||  || ||||||||||||||||| | | ||||||||||||||||    
T  47030455 ttttctaatatgttttgaataagaggggaggggagtgtatattttaacttaagaggggaggagagtgtaattc 47030527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 8 - 276
Target Start/End: Original strand, 615908 - 616176
Alignment:
Q  8 cgaagaatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnnaagtgtgttaaattattattttttgctagattattagaa 107  Q
    |||| |||||||||| ||||||||||||||||||||||||||||||||| ||         || |||||||||||||||||||||||||||||||||| |    
T  615908 cgaaaaatatgtattcaattttttattatattaaaatagacccgcaataatattttttaaaaa-tgtgttaaattattattttttgctagattattagca 616006  T
Q  108 ataataaaaaagaatattgagggagtaaagtgtagattttaacataaga--nnnnnnnnatgtaattcaagcttctcttaggggaggagagtgaannnnn 205  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||| |||||||         
T  616007 ataataaaaaagaatattgagggagtaaagtgtagattttaacataagaggggagggggatgtaattcaagcttctcttaggggaggggagtgaattttt 616106  T
Q  206 nnctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagaggagagtgtaattc 276  Q
       ||| |||||||||||||||||| |  ||| ||||||||||||||||| |   |||| |||||||||||    
T  616107 tt-taatatgttttgaataagaggggatgagagtgtatattttaacttaagagaggaggggagtgtaattc 616176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 69 - 276
Target Start/End: Complemental strand, 796622 - 796413
Alignment:
Q  69 aagtgtgttaaattattattttttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga--nnnnnnnnat 166  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||          ||    
T  796622 aagtgtgttaaattattattttttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataagaggggagggagat 796523  T
Q  167 gtaattcaagcttctcttaggggaggagagtgaannnnnnnctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagaggag 266  Q
    |||||||||||||||||||||||||| |||||||       |||| || ||||||||||||||| ||  || ||||||||||||||||| | | |||| |    
T  796522 gtaattcaagcttctcttaggggaggggagtgaaattttttctaatatcttttgaataagaggggaggggagtgtatattttaacttaagaggggagggg 796423  T
Q  267 agtgtaattc 276  Q
    ||||||||||    
T  796422 agtgtaattc 796413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 13 - 156
Target Start/End: Complemental strand, 23265398 - 23265254
Alignment:
Q  13 aatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnn-aagtgtgttaaattattattttttgctagattattagaaataa 111  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||||||    
T  23265398 aatatgtattcaattttttattatattaaaatagacccgcaatactattttttttttaagtgtgttaaattattattttttgctagattattagaaataa 23265299  T
Q  112 taaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    |||||||||||||| ||||||||||||||||||||||||||||||    
T  23265298 taaaaaagaatatttagggagtaaagtgtagattttaacataaga 23265254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 8 - 255
Target Start/End: Original strand, 7165852 - 7166102
Alignment:
Q  8 cgaagaatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnnaagtgtgttaaattattatttt--ttgctagattattag 105  Q
    |||| |||||||||| ||||||||||||||||||||||||| || |||||||         |||||||||||||| || ||||  |||||||||||||||    
T  7165852 cgaaaaatatgtattcaattttttattatattaaaatagactcgtaatactatttttttt-aagtgtgttaaattttttttttttttgctagattattag 7165950  T
Q  106 aaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga--nnnnnnnnatgtaattcaagcttctcttaggggaggagagtgaannn 203  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||| |||||||       
T  7165951 aaataataaaaaagaatattgagggagtaaagtgtagattttaacataagaggggagggaaatgtaattcaagcttctcttaggggaggggagtgaaatt 7166050  T
Q  204 nnnnctaacatgttttgaataagagggaagaagaatgtatattttaacttaa 255  Q
        || | |||||||||||||||||| ||  || |||||||||||||||||    
T  7166051 ttttctgatatgttttgaataagaggggaggggagtgtatattttaacttaa 7166102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 13 - 254
Target Start/End: Original strand, 12251135 - 12251375
Alignment:
Q  13 aatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnnaagtgtgttaaattattattttttgctagattattagaaataat 112  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||         |||||||||||||| || ||||||||||||||||||||||||||    
T  12251135 aatatgtattcaattttttattatattaaaatagacccgcaatactatttttttt-aagtgtgttaaattttt-ttttttgctagattattagaaataat 12251232  T
Q  113 aaaaaagaatattgagggagtaaagtgtagattttaacataaga--nnnnnnnnatgtaattcaagcttctcttaggggaggagagtgaannnnnnncta 210  Q
    |||||||||||||||||||||||| ||| |||||||||||||||          ||||||||||||||||||||| |||||| |||||||       |||    
T  12251233 aaaaaagaatattgagggagtaaaatgtggattttaacataagaggggagggggatgtaattcaagcttctctta-gggaggggagtgaaaatttttcta 12251331  T
Q  211 acatgttttgaataagagggaagaagaatgtatattttaactta 254  Q
    | |||||||||||||||||||||   | ||||||||||||||||    
T  12251332 atatgttttgaataagagggaagggaagtgtatattttaactta 12251375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 87 - 276
Target Start/End: Original strand, 8192844 - 8193035
Alignment:
Q  87 ttttttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga--nnnnnnnnatgtaattcaagcttctctt 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||          ||||||||||||||||||||    
T  8192844 ttttttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataagaggggagggagatgtaattcaagcttctctt 8192943  T
Q  185 aggggaggagagtgaannnnnnnctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagaggagagtgtaattc 276  Q
    |||||||| |||||||       |||| |||||||||||||||||| ||  || ||||||||||||||||| | | |||| |||||||||||    
T  8192944 aggggaggggagtgaaattttttctaatatgttttgaataagaggggaggggagtgtatattttaacttaagaggggaggggagtgtaattc 8193035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 13 - 257
Target Start/End: Complemental strand, 23721671 - 23721428
Alignment:
Q  13 aatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnnaagtgtgttaaattattatt-ttttgctagattattagaaataa 111  Q
    |||||||||| ||||||||||| |||||||||||||| | |||||||         |||||||||| ||||||||| |||| |||||||||| |||||||    
T  23721671 aatatgtatttaattttttattctattaaaatagacctgtaatactatttttttcgaagtgtgttagattattattatttttctagattatttgaaataa 23721572  T
Q  112 taaaaaagaatattgagggagtaaagtgtagattttaacataagannnnnnnnatgtaattcaagcttctcttaggggaggagagtgaannnnnnnctaa 211  Q
     ||| ||  |||||||||||||||||||||| ||||||||||||         ||||||||||||||||||||||||||||||||||||       ||||    
T  23721571 aaaataa--atattgagggagtaaagtgtaggttttaacataaggggggaggaatgtaattcaagcttctcttaggggaggagagtgaaaagttttctaa 23721474  T
Q  212 catgttttgaataagagggaagaagaatgtatattttaacttaaaa 257  Q
     |||||||||||||| ||| || | ||||||||||||||| |||||    
T  23721473 tatgttttgaataagtggggaggaaaatgtatattttaacataaaa 23721428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 13 - 276
Target Start/End: Complemental strand, 16960498 - 16960235
Alignment:
Q  13 aatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnn-aagtgtgttaaattattattttttgctagattattagaaataa 111  Q
    |||||||||| || ||||  |||||||||||||||||||||||||||          |||||||||| ||||||||||||||||||||||||||||   |    
T  16960498 aatatgtattcaaattttggttatattaaaatagacccgcaatactatttgttttcgaagtgtgttagattattattttttgctagattattagaa---a 16960402  T
Q  112 taaaaaagaatattgagggagtaaagtgtagattttaacataaga--nnnnnnnnatgtaattcaagcttctcttaggggaggagagtgaannnnnnnct 209  Q
    ||||||| | |||||||||||||||||||||||||||||||||||          |||||||| |||||||||||||||||||  ||||||       ||    
T  16960401 taaaaaaaattattgagggagtaaagtgtagattttaacataagagggaagagaaatgtaatttaagcttctcttaggggagggaagtgaaaagttttct 16960302  T
Q  210 aacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagaggagagtgtaattc 276  Q
    || |||||||||||||||||| ||  || ||||||||||||| ||| | | ||||  ||||||||||    
T  16960301 aatatgttttgaataagaggggaggggagtgtatattttaacataagaggggagggaagtgtaattc 16960235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 27 - 156
Target Start/End: Complemental strand, 32448551 - 32448424
Alignment:
Q  27 tttttattatattaaaatagacccgcaatactannnnnnnnnaagtgtgttaaattattatt-ttttgctagattattagaaataataaaaaagaatatt 125  Q
    |||||||||||||||||||||||||||||||||         |||||||||| ||||||||| ||||||||||||||||||||||| ||||||   ||||    
T  32448551 tttttattatattaaaatagacccgcaatactattttttccgaagtgtgttagattattattattttgctagattattagaaataaaaaaaaa---tatt 32448455  T
Q  126 gagggagtaaagtgtagattttaacataaga 156  Q
    |||||||||||||||||||||||||||||||    
T  32448454 gagggagtaaagtgtagattttaacataaga 32448424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 13 - 155
Target Start/End: Original strand, 44664961 - 44665102
Alignment:
Q  13 aatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnnaagtgtgttaaattattatt-ttttgctagattattagaaataa 111  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||         |||||||||| ||||||||| |||| ||||||| |||||||||     
T  44664961 aatatgtatttaattttttattatattaaaatagacccgcaatactatttttttttaagtgtgttagattattattatttttctagattgttagaaata- 44665059  T
Q  112 taaaaaagaatattgagggagtaaagtgtagattttaacataag 155  Q
     ||||    |||||||||||||||||||||||||||||||||||    
T  44665060 -aaaactatatattgagggagtaaagtgtagattttaacataag 44665102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 8 - 276
Target Start/End: Complemental strand, 17729810 - 17729541
Alignment:
Q  8 cgaagaatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnn-aagtgtgttaaattattatt-ttttgctagattattag 105  Q
    |||| ||||| |||| ||||||||||| |||||||||||||| | |||||||          || ||||||| ||||||||| |||| |||||||||| |    
T  17729810 cgaaaaatatatatttaattttttattctattaaaatagacctgtaatactattttttttcgaaatgtgttagattattattatttttctagattatttg 17729711  T
Q  106 aaataataaaaaagaatattgagggagtaaagtgtagattttaacataa-gannnnnnnnatgtaattcaagcttctcttaggggaggagagtgaannnn 204  Q
    |||||| ||| ||  |||||||||||||||||||||||||||||||||| |         |||||||||||||||||||||||||||| |||||||        
T  17729710 aaataaaaaataa--atattgagggagtaaagtgtagattttaacataagggggaggggaatgtaattcaagcttctcttaggggaggggagtgaaaagt 17729613  T
Q  205 nnnctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagaggagagtgtaattc 276  Q
       |||| |||||||||||||||||  ||  |||||||||||||||| ||| | |||||   ||||||||||    
T  17729612 tttctaatatgttttgaataagaggcgaggggaatgtatattttaacataagaggagagagaagtgtaattc 17729541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 33 - 251
Target Start/End: Complemental strand, 9784860 - 9784641
Alignment:
Q  33 ttatattaaaatagacccgcaatactannnnnnnnn-aagtgtgttaaattattatttttt-gctagattattagaaataataaaaaagaatattgaggg 130  Q
    |||||||||||||||||||||||||||          |||||||||| ||||||||||||| ||||||||||||||||||| |||||    |||||| ||    
T  9784860 ttatattaaaatagacccgcaatactatttgttttcgaagtgtgttagattattatttttttgctagattattagaaataaaaaaaat---tattgaagg 9784764  T
Q  131 agtaaagtgtagattttaacataaga--nnnnnnnnatgtaattcaagcttctcttaggggaggagagtgaannnnnnnctaacatgttttgaataagag 228  Q
    ||||||||||||||||||||||||||          |||||||||||| ||||||||||||| | |||||||       |||| ||||||||||||||||    
T  9784763 agtaaagtgtagattttaacataagaggggagatgaatgtaattcaagattctcttaggggatgtgagtgaaaaattttctaatatgttttgaataagag 9784664  T
Q  229 ggaagaagaatgtatattttaac 251  Q
     | || ||| |||||||||||||    
T  9784663 aggaggagagtgtatattttaac 9784641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 13 - 200
Target Start/End: Original strand, 21037734 - 21037920
Alignment:
Q  13 aatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnn-aagtgtgttaaattattatttttt-gctagattattagaaata 110  Q
    |||| ||||| || |||| ||||||||||||||||||||||||||||          |||||||||| ||| ||||||||| ||||||||||||||||||    
T  21037734 aatacgtatttaaattttgattatattaaaatagacccgcaatactattttttcccgaagtgtgttagatttttatttttttgctagattattagaaata 21037833  T
Q  111 ataaaaaagaatattgagggagtaaagtgtagattttaacataaga--nnnnnnnnatgtaattcaagcttctcttaggggaggagagtgaa 200  Q
    | ||||     |||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||| |||||||    
T  21037834 aaaaaa-----tattgagggagtaaagtgtagattttaacataagagggaagaaaaatgtaattcaagcttctcttaggggaggggagtgaa 21037920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 8 - 228
Target Start/End: Complemental strand, 16191948 - 16191729
Alignment:
Q  8 cgaagaatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnnaagtgtgttaaattattatt--ttttgctagattattag 105  Q
    |||| ||||| |||| |||||||||||||||||||||||||||  ||||| |         |||||||||| |||||||||  |||||||||||||||||    
T  16191948 cgaaaaatatatattcaattttttattatattaaaatagacccataatacaatttttttcgaagtgtgttagattattattatttttgctagattattag 16191849  T
Q  106 aaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga--nnnnnnnnatgtaattcaagcttctcttaggggaggagagtgaannn 203  Q
    |||||| ||||     |||||||||||||||||||||||||||  ||||||          |||||||||||||||||||||||||||| | |||||       
T  16191848 aaataaaaaaa-----tattgagggagtaaagtgtagattttattataagaggggaggggaatgtaattcaagcttctcttaggggaggggggtgaaaag 16191754  T
Q  204 nnnnctaacatgttttgaataagag 228  Q
        |||| ||||||||||||||||    
T  16191753 tattctaatatgttttgaataagag 16191729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 156
Target Start/End: Original strand, 26618982 - 26619121
Alignment:
Q  16 atgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnnaagtgtgttaaattattattttttgctagattattagaaataataaa 115  Q
    ||||||| || |||| |||||||||||||||||  |||||||||         |||| ||||| ||||||||| |||| ||||||||||||||||| |||    
T  26618982 atgtattcaaattttgattatattaaaatagacatgcaatactattttttccgaagtatgttagattattattgtttgatagattattagaaataaaaaa 26619081  T
Q  116 aaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    ||| | |||||||| ||||||||||||||||||||||||||    
T  26619082 aaa-attattgaggtagtaaagtgtagattttaacataaga 26619121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 13 - 200
Target Start/End: Original strand, 6233564 - 6233756
Alignment:
Q  13 aatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnn-aagtgtgttaaattattatt-ttttgctagattattagaaata 110  Q
    |||||||||| ||||||| |||||||||||||||| || ||||||||          |||||||||| ||||||||| |||||||||||||||| |||||    
T  6233564 aatatgtattcaattttt-attatattaaaatagatccacaatactattttttttcgaagtgtgttagattattattgttttgctagattattaaaaata 6233662  T
Q  111 a--taaaaaagaatattgagggagtaaagtgtagattttaacataaga--nnnnnnnnatgtaattcaagcttctcttaggggaggagagtgaa 200  Q
    |  ||||||  |||||||| ||||||||||||||||||||||||||||          |||||||||||||||||||||||| ||| |||||||    
T  6233663 aaataaaaattaatattgatggagtaaagtgtagattttaacataagaggggaagagaatgtaattcaagcttctcttagggaaggggagtgaa 6233756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 8 - 276
Target Start/End: Original strand, 19313791 - 19314058
Alignment:
Q  8 cgaagaatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnnaagtgtgttaaattattatt-ttttgctagattattaga 106  Q
    |||| |||||||||| ||||||| ||| ||||||||||||| || |||||||         |||||| ||| ||||||||| |||| |||||||||| ||    
T  19313791 cgaaaaatatgtatttaattttt-attctattaaaatagactcgtaatactattttttca-aagtgtcttagattattattattttcctagattatttga 19313888  T
Q  107 aataataaaaaagaatattgagggagtaaagtgtagattttaacataa--gannnnnnnnatgtaattcaagcttctcttaggggaggagagtgaannnn 204  Q
    ||||| ||| ||  ||||||||||||||||||||||||||||||||||  |         ||||||||||| ||||||||||||||||   |||||        
T  19313889 aataaaaaataa--atattgagggagtaaagtgtagattttaacataaggggggatgtgaatgtaattcaaacttctcttaggggagggacgtgaaaagt 19313986  T
Q  205 nnnctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagaggagagtgtaattc 276  Q
       |||| |||||||||||||||||| ||| || ||||||||||||| ||| | | |||| |||||||||||    
T  19313987 tttctaatatgttttgaataagaggggagaggagtgtatattttaacataagacgggaggggagtgtaattc 19314058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 8 - 251
Target Start/End: Original strand, 55069289 - 55069534
Alignment:
Q  8 cgaagaatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnnaa-gtgtgttaaattattatt--ttttgctagattatta 104  Q
    |||| |||||||||| |||||||||||||||||||||||||| | ||||| |         || |||||||| |||||||||  |||||||| ||| |||    
T  55069289 cgaaaaatatgtattcaattttttattatattaaaatagacctgtaatacaatttttttccaaagtgtgttagattattattatttttgctaaattgtta 55069388  T
Q  105 gaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga--nnnnnnnnatgtaattcaagcttctcttaggggaggagagtgaann 202  Q
    ||||||| |||||| |   |||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||| | ||| |      
T  55069389 gaaataaaaaaaaaaa---ttgagggagtaaagtgtagattttaacataagaggggaggggaatgtaattcaagcttctcttaggggaggggcgtgtaaa 55069485  T
Q  203 nnnnnctaacatgttttgaataagagggaagaagaatgtatattttaac 251  Q
         |||| |||||||||||||||||| ||   | |||||||||||||    
T  55069486 gttttctaatatgttttgaataagaggggagggaattgtatattttaac 55069534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 8 - 251
Target Start/End: Complemental strand, 33032458 - 33032215
Alignment:
Q  8 cgaagaatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnnaagtgtgttaaattattatt-ttttgctagattattaga 106  Q
    |||| |||||||||| ||||||||||| ||||||||||||| || |||||||         |||||||||| ||||||||| |||| |||||||||| ||    
T  33032458 cgaaaaatatgtatttaattttttattctattaaaatagactcgtaatactattttttcg-aagtgtgttagattattattatttttctagattatttga 33032360  T
Q  107 aataataaaaaagaatattgagggagtaaagtgtagattttaacataa--gannnnnnnnatgtaattcaagcttctcttaggggaggagagtgaannnn 204  Q
    ||||| ||| ||  |||| ||||||||||| |||||||||||||||||  |         ||||||||||||||||||||| |||| | |||||||        
T  33032359 aataaaaaataa--atatcgagggagtaaaatgtagattttaacataaggggggatgagaatgtaattcaagcttctcttaagggatgggagtgaaaaat 33032262  T
Q  205 nnnctaacatgttttgaataagagggaagaagaatgtatattttaac 251  Q
       |||| ||||||||||||| |||| ||| || |||||||||||||    
T  33032261 tttctaatatgttttgaataaaaggggagaggagtgtatattttaac 33032215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 8 - 148
Target Start/End: Original strand, 36408333 - 36408471
Alignment:
Q  8 cgaagaatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnnaagtgtgttaaattattatt--ttttgctagattattag 105  Q
    |||| |||||||||| |||||||||||||||||||||||||||  ||||| |         |||||||||| |||||||||  |||||||||||||||||    
T  36408333 cgaaaaatatgtattcaattttttattatattaaaatagacccataatacaattttttgcgaagtgtgttagattattattatttttgctagattattag 36408432  T
Q  106 aaataataaaaaagaatattgagggagtaaagtgtagatttta 148  Q
    || |||    ||| |||||||||||||||||||||||||||||    
T  36408433 aactaa----aaacaatattgagggagtaaagtgtagatttta 36408471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 8 - 148
Target Start/End: Original strand, 36422499 - 36422637
Alignment:
Q  8 cgaagaatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnnaagtgtgttaaattattatt--ttttgctagattattag 105  Q
    |||| |||||||||| |||||||||||||||||||||||||||  ||||| |         |||||||||| |||||||||  |||||||||||||||||    
T  36422499 cgaaaaatatgtattcaattttttattatattaaaatagacccataatacaattttttgcgaagtgtgttagattattattatttttgctagattattag 36422598  T
Q  106 aaataataaaaaagaatattgagggagtaaagtgtagatttta 148  Q
    || |||    ||| |||||||||||||||||||||||||||||    
T  36422599 aactaa----aaacaatattgagggagtaaagtgtagatttta 36422637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 69 - 152
Target Start/End: Complemental strand, 53102336 - 53102254
Alignment:
Q  69 aagtgtgttaaattattattttttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacat 152  Q
    |||||||||| |||||||||||||||||||||||||||||||| |||||| |||||| | ||||||||| ||||||||||||||    
T  53102336 aagtgtgttagattattattttttgctagattattagaaataa-aaaaaaaaatattaacggagtaaagagtagattttaacat 53102254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 13 - 276
Target Start/End: Original strand, 33047012 - 33047274
Alignment:
Q  13 aatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnn-aagtgtgttaaattattattttttgctagattattagaaataa 111  Q
    |||||||||| || |||| |||||||| |||||||||||||||||||          || ||||||| ||| ||||||| | |||||||||||||||       
T  33047012 aatatgtattcaaattttgattatatttaaatagacccgcaatactagtttttttcgaattgtgttagattgttattttctactagattattagaaa--- 33047108  T
Q  112 taaaaaagaatattgagggagtaaagtgtagattttaacataaga--nnnnnnnnatgtaattcaagcttctcttaggggaggagagtgaannnnnnnct 209  Q
     ||||||  |||||||||||||||||||||||||||||||| |||          || |||||||||| |||||||||||||| |||||||       ||    
T  33047109 -aaaaaaatatattgagggagtaaagtgtagattttaacatgagaggggaggggaatataattcaagcatctcttaggggaggggagtgaaattttttct 33047207  T
Q  210 aacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagaggagagtgtaattc 276  Q
    || |||||||||||||||||| |   || ||||||||||||| ||| | | |||| |||||||||||    
T  33047208 aatatgttttgaataagaggggaagggagtgtatattttaacataagaggggaggggagtgtaattc 33047274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 27 - 251
Target Start/End: Complemental strand, 7478952 - 7478725
Alignment:
Q  27 tttttattatattaaaatagacccgcaatactannnnnnnnnaagtgtgttaaattattatttttt-gctagattattagaaataataaaaaagaatatt 125  Q
    |||||||||||||||||||||||||||||| ||         || ||||||| ||||||||||||| ||||| |||||| |||||| || ||| ||||||    
T  7478952 tttttattatattaaaatagacccgcaataatatttttttcgaattgtgttagattattattttttagctagtttattaaaaataaaaataaa-aatatt 7478854  T
Q  126 gagggagtaaagtgtaga-ttttaacataaga--nnnnnnnnatgtaattcaagcttctcttaggggaggagagtgaannnnnnnctaacatgttttgaa 222  Q
    |||||||||||||||||| |||||||||||||          |||||||||||||||||||| | ||||| |||||||       |||| ||||||||||    
T  7478853 gagggagtaaagtgtagatttttaacataagaggggatgagaatgtaattcaagcttctcttggaggaggggagtgaaaagttttctaatatgttttgaa 7478754  T
Q  223 taagagggaagaagaatgtatattttaac 251  Q
     || | || ||  ||||||||||||||||    
T  7478753 aaaaaagggaggggaatgtatattttaac 7478725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 69 - 276
Target Start/End: Complemental strand, 37709015 - 37708805
Alignment:
Q  69 aagtgtgttaaattattatttttt--gctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga--nnnnnnnn 164  Q
    |||| ||||| |||||||||||||  || ||||| |||||||||| |||||| |||||||| ||||||||| ||||||||||||| ||||              
T  37709015 aagtatgttagattattattttttttgcaagattgttagaaataaaaaaaaa-aatattgatggagtaaagggtagattttaacacaagaggggagggga 37708917  T
Q  165 atgtaattcaagcttctcttaggggaggagagtgaannnnnnnctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagagg 264  Q
    |||||||||||||||||||||||||||| |||||||       |||  |||||||||||||||||| ||  || ||||||||||||| ||| | | |||     
T  37708916 atgtaattcaagcttctcttaggggaggggagtgaaaagttttctattatgttttgaataagaggggaggggagtgtatattttaacataagaggggaga 37708817  T
Q  265 agagtgtaattc 276  Q
     |||||||||||    
T  37708816 ggagtgtaattc 37708805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 16 - 275
Target Start/End: Complemental strand, 55139642 - 55139382
Alignment:
Q  16 atgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnn-aagtgtgttaaattattatt-ttttgctagattattagaaataata 113  Q
    ||||||| |||||||||||||||||||||||||  |||||||||          |||||||||| | ||||||| |||| |||| ||||||||||||| |    
T  55139642 atgtattcaattttttattatattaaaatagacatgcaatactatttttttccgaagtgtgttagactattattatttttctagcttattagaaataaaa 55139543  T
Q  114 aaaaagaatattgagggagtaaagtgtagattttaacataa-gannnnnnnnatgtaattcaagcttctcttaggggaggagagtgaannnnnnnctaac 212  Q
    |  ||  |||| ||||||||||||||||||||||||||||| |         |||||||||||||||||||||||||| | |||||||       || |     
T  55139542 agtaa--atatcgagggagtaaagtgtagattttaacataagggggaggggaatgtaattcaagcttctcttaggggatgggagtgaaaaaatttctgat 55139445  T
Q  213 atgttttgaataagagggaagaagaatgtatattttaacttaaaaagagaggagagtgtaatt 275  Q
    || |||||||||||||||||   || ||||||||||||| ||| | |||||  ||||||||||    
T  55139444 atattttgaataagagggaaatggagtgtatattttaacataagaggagagaggagtgtaatt 55139382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 87 - 275
Target Start/End: Complemental strand, 37423998 - 37423811
Alignment:
Q  87 ttttttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga--nnnnnnnnatgtaattcaagcttctctt 184  Q
    ||||||||||||||||||||||||| ||||||   |||||||||| ||||| |||||||||||| |||||          |||||||||||||||||||     
T  37423998 ttttttgctagattattagaaataaaaaaaaa---tattgagggactaaagcgtagattttaacttaagaggggaggagaatgtaattcaagcttctctc 37423902  T
Q  185 aggggaggagagtgaannnnnnnctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagaggagagtgtaatt 275  Q
    | |||||| |||||||       |||| ||||||||||||||||||  |  || ||||||||||||| ||| | | |||| ||||||||||    
T  37423901 aagggaggggagtgaaatattttctaatatgttttgaataagaggggtggggagtgtatattttaacataagaggggaggggagtgtaatt 37423811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 14 - 276
Target Start/End: Complemental strand, 45847428 - 45847165
Alignment:
Q  14 atatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnn-aagtgtgttaaattattatt--ttttgctagattattagaaata 110  Q
    ||||||||| || |||||||||||||||||||||||||  |||| |          |||||||||| |||||||||  |||||||| |||||||||||||    
T  45847428 atatgtattcaaatttttattatattaaaatagacccgtgatacaattttttcccgaagtgtgttagattattattatttttgctaaattattagaaata 45847329  T
Q  111 ataaaaaagaatattgagggagtaaagtgtagattttaacataaga--nnnnnnnnatgtaattcaagcttctcttaggggaggagagtgaannnnnnnc 208  Q
    | ||||||    |||||| |||||||||||||||||||||||||||          ||||||||| |||||||||||||||  ||| ||| |       |    
T  45847328 aaaaaaaa----attgagtgagtaaagtgtagattttaacataagaggggaggggaatgtaattccagcttctcttagggggagagggtgtaaagttttc 45847233  T
Q  209 taacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagaggagagtgtaattc 276  Q
    ||| |||||||||||||||||| ||  || ||||||||||||| ||| | | ||||  ||||||||||    
T  45847232 taatatgttttgaataagaggggaggggattgtatattttaacataagaggggagggaagtgtaattc 45847165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 8 - 250
Target Start/End: Complemental strand, 49702672 - 49702432
Alignment:
Q  8 cgaagaatatgtattaaattttttattatattaaaatagacccgcaatacta-nnnnnnnnnaagtgtgttaaattattat--tttttgctagattatta 104  Q
    |||| |||||||||| |||||||||||||||||||||||||||| ||||| |          |||||||||| ||||||||  ||||||||| |||||||    
T  49702672 cgaaaaatatgtattcaattttttattatattaaaatagacccgtaatacaatttttttccgaagtgtgttagattattattatttttgctaaattatta 49702573  T
Q  105 gaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga--nnnnnnnnatgtaattcaagcttctcttaggggaggagagtgaann 202  Q
    | ||||| ||||      |||||| |||||||||||||||||||||  ||||          |||||||||||||||||||||||||||| | | | |      
T  49702572 gcaataaaaaaa------attgagagagtaaagtgtagattttaacgaaagaggggaggggaatgtaattcaagcttctcttaggggagg-gggcgtaaa 49702480  T
Q  203 nnnnnctaacatgttttgaataagagggaagaagaatgtatattttaa 250  Q
         |||| |||||||||||||||||| |||||| ||||||||||||    
T  49702479 gttttctaatatgttttgaataagaggggagaagattgtatattttaa 49702432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 90 - 251
Target Start/End: Complemental strand, 50824845 - 50824683
Alignment:
Q  90 tttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga--nnnnnnnnatgtaattcaagcttctcttagg 187  Q
    |||||||||||||| ||||||| |||||| | |||||||||| ||||| |||||||||||| |||||          ||||||||||||||||||| | |    
T  50824845 tttgctagattattggaaataaaaaaaaa-attattgagggactaaagcgtagattttaacttaagaggggaggggaatgtaattcaagcttctctcaag 50824747  T
Q  188 ggaggagagtgaannnnnnnctaacatgttttgaataagagggaagaagaatgtatattttaac 251  Q
    ||||| |||||||       |||| |||||||||||||||||| |  ||| |||||||||||||    
T  50824746 ggaggggagtgaaatattttctaatatgttttgaataagaggggatgagagtgtatattttaac 50824683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 8 - 59
Target Start/End: Original strand, 56309858 - 56309909
Alignment:
Q  8 cgaagaatatgtattaaattttttattatattaaaatagacccgcaatacta 59  Q
    |||| |||||||||| ||||||||||||||||||||||||||||||||||||    
T  56309858 cgaaaaatatgtattcaattttttattatattaaaatagacccgcaatacta 56309909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 165 - 276
Target Start/End: Original strand, 4950529 - 4950640
Alignment:
Q  165 atgtaattcaagcttctcttaggggaggagagtgaannnnnnnctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagagg 264  Q
    ||||||||||||||||||| | |||||| |||||||       |||| |||||||||||||||||| ||  || ||||||||||||| ||| ||||||||    
T  4950529 atgtaattcaagcttctctcaagggaggggagtgaaatattttctaatatgttttgaataagaggggaggggagtgtatattttaacataagaagagagg 4950628  T
Q  265 agagtgtaattc 276  Q
     |||||| ||||    
T  4950629 ggagtgtgattc 4950640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 13 - 156
Target Start/End: Complemental strand, 10555886 - 10555745
Alignment:
Q  13 aatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnn-aagtgtgttaaattattattttttgctagattattagaaataa 111  Q
    |||||||||| || |||| |||||||||||||||||  |||||||||          |||||||||| ||| ||  |||||| ||||||||||||||| |    
T  10555886 aatatgtattcaaattttgattatattaaaatagacttgcaatactattttattttgaagtgtgttagattttt--tttttgttagattattagaaatta 10555789  T
Q  112 taaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
     |||||| | ||||||||||||||||||||| |||||||||||||    
T  10555788 aaaaaaa-attattgagggagtaaagtgtaggttttaacataaga 10555745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 95 - 276
Target Start/End: Complemental strand, 37423352 - 37423173
Alignment:
Q  95 tagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataagannnnnnnn--atgtaattcaagcttctcttaggggagg 192  Q
    ||||||||||||||||| |||||    |||||||||| ||||| ||||||||||||||||||          ||||||||||||||||||| ||| ||||    
T  37423352 tagattattagaaataaaaaaaa----tattgagggactaaagcgtagattttaacataagaggggagaggaatgtaattcaagcttctctcaggagagg 37423257  T
Q  193 agagtgaannnnnnnctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagaggagagtgtaattc 276  Q
     |||||||       |||| |||||||||||||||||| || | | || |||||||||| ||| ||  |||| |||||||||||    
T  37423256 ggagtgaaatattttctaatatgttttgaataagaggggaggaaactgcatattttaacataagaatggaggggagtgtaattc 37423173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 69 - 156
Target Start/End: Original strand, 29979550 - 29979632
Alignment:
Q  69 aagtgtgttaaattattattttttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    |||||||||| |||||| ||||||||||||||| || || |  |||||||  ||||||||||||||||||||||||||||||||||||    
T  29979550 aagtgtgttagattatt-ttttttgctagattactaaaagt--taaaaaa--atattgagggagtaaagtgtagattttaacataaga 29979632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 69 - 266
Target Start/End: Complemental strand, 36897694 - 36897498
Alignment:
Q  69 aagtgtgttaaattattattttttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga--nnnnnnnnat 166  Q
    |||||||||| ||||| ||||||||||||||||||| ||||||   |  |   |||||||||| ||||||||||||||||||||||||          ||    
T  36897694 aagtgtgttagattataattttttgctagattattaaaaataa---attattttattgagggattaaagtgtagattttaacataagaggggagggtaat 36897598  T
Q  167 gtaattcaagcttctcttaggggaggagagtgaannnnnnnctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagaggag 266  Q
    |||||||||||||||||||| ||||  |  ||||       |||| || ||||||||||||||| ||  || ||||||||||||||||||| | ||||||    
T  36897597 gtaattcaagcttctcttagaggagtgggatgaaatattttctaatatattttgaataagaggggaggggagtgtatattttaacttaaaaggggaggag 36897498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 87 - 156
Target Start/End: Complemental strand, 7851929 - 7851865
Alignment:
Q  87 ttttttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    |||||||||||||||||||||||  |||||||   |||||| ||||||||||||||||||||||||||||    
T  7851929 ttttttgctagattattagaaat--taaaaaa---tattgatggagtaaagtgtagattttaacataaga 7851865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 113 - 276
Target Start/End: Original strand, 36651150 - 36651314
Alignment:
Q  113 aaaaaagaatattgagggagtaaagtgtagattttaacataaga--nnnnnnnnatgtaattcaagcttctcttaggggaggagagtgaannnnnnncta 210  Q
    |||||| ||||||||| || ||||||||||||||||||||||||          |||||||||||| ||||||||||||||| |||||||       |||    
T  36651150 aaaaaaaaatattgagcgattaaagtgtagattttaacataagagtggagggaaatgtaattcaagtttctcttaggggaggggagtgaa-aaaattcta 36651248  T
Q  211 acatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagaggagagtgtaattc 276  Q
    | ||||||||||||||| || || | | |||||| |||||| ||||||  |||| |||||||||||    
T  36651249 atatgttttgaataagaagggaggaaagtgtatactttaacataaaaaaggaggggagtgtaattc 36651314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 69 - 156
Target Start/End: Original strand, 36687787 - 36687873
Alignment:
Q  69 aagtgtgttaaattattattttttg--ctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    |||||||||| ||| |||||||||   |||||||||||||||||| ||||||   ||||||||| ||||||||||||||| |||||||||    
T  36687787 aagtgtgttagatttttattttttttactagattattagaaataaaaaaaaa---tattgagggggtaaagtgtagatttaaacataaga 36687873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 89 - 156
Target Start/End: Original strand, 4964442 - 4964508
Alignment:
Q  89 ttttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    |||| |||||||||||||||||| |||||| | |||| |||||||||| |||||||||||||||||||    
T  4964442 tttttctagattattagaaataaaaaaaaata-tattaagggagtaaaatgtagattttaacataaga 4964508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 69 - 156
Target Start/End: Complemental strand, 29429274 - 29429193
Alignment:
Q  69 aagtgtgttaaattattattttttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    |||||||||| ||||||||||||| |||||||||||||| | | ||||||     |||||||||||||| ||||||||||||||||||    
T  29429274 aagtgtgttagattattatttttt-ctagattattagaagttaaaaaaaa-----ttgagggagtaaagagtagattttaacataaga 29429193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 95 - 154
Target Start/End: Original strand, 51020165 - 51020223
Alignment:
Q  95 tagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataa 154  Q
    ||||||||||||||||| | |||| |||||||| ||||||||||||||||||||||||||    
T  51020165 tagattattagaaataaaataaaa-aatattgaaggagtaaagtgtagattttaacataa 51020223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 87 - 276
Target Start/End: Complemental strand, 17722967 - 17722780
Alignment:
Q  87 ttttttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga--nnnnnnnnatgtaattcaagcttctctt 184  Q
    ||||||||||||||||||||||||| ||||     ||||| |||||||||||||||||||| || |||||          ||||||||||||||||| ||    
T  17722967 ttttttgctagattattagaaataaaaaaat----tattgtgggagtaaagtgtagattttgacttaagaggggaggggaatgtaattcaagcttctatt 17722872  T
Q  185 aggggaggagagtgaannnnnnnctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagaggagagtgtaattc 276  Q
    |  ||| | |||||||       |||| |||||||||||||||||| ||  || ||||||||||||| ||| | | |||| |||||||||||    
T  17722871 aatggaagggagtgaaatttttcctaatatgttttgaataagaggggaggggagtgtatattttaacataagaggggaggggagtgtaattc 17722780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 165 - 276
Target Start/End: Complemental strand, 30192650 - 30192539
Alignment:
Q  165 atgtaattcaagcttctcttaggggaggagagtgaannnnnnnctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagagg 264  Q
    ||||||||||||||||||| |||||||| || ||||       |||| |||||||||||||||||| ||   | ||||||||||||| ||| | | ||||    
T  30192650 atgtaattcaagcttctctcaggggaggggaatgaaatattttctaatatgttttgaataagaggggagggaagtgtatattttaacataagaggggagg 30192551  T
Q  265 agagtgtaattc 276  Q
    ||||||||||||    
T  30192550 agagtgtaattc 30192539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 87 - 156
Target Start/End: Complemental strand, 25009608 - 25009540
Alignment:
Q  87 ttttttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    |||||||||| |||||||||||||| |||||| | |||||||||| ||||| |||||||||||| |||||    
T  25009608 ttttttgctaaattattagaaataaaaaaaaa-attattgagggactaaagcgtagattttaacttaaga 25009540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 69 - 156
Target Start/End: Complemental strand, 36687417 - 36687332
Alignment:
Q  69 aagtgtgttaaattattattttttg--ctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    |||||||||| ||| |||||||||   |||||||||||||||||| |||||    ||||||||| ||||||||||||||| |||||||||    
T  36687417 aagtgtgttagatttttattttttttactagattattagaaataaaaaaaa----tattgagggggtaaagtgtagatttaaacataaga 36687332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 87 - 251
Target Start/End: Original strand, 42074287 - 42074450
Alignment:
Q  87 ttttttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga-nnnnnnnnatgtaattcaagcttctctta 185  Q
    ||||||||||||||||||||||| |||||||  | ||||||  || |||||||||||||| |||||||||         |||||||||||| ||||||||    
T  42074287 ttttttgctagattattagaaattataaaaa--attattgaaagaataaagtgtagatttcaacataagaggggaggggatgtaattcaagtttctctta 42074384  T
Q  186 ggggaggagagtgaannnnnnnctaacatgttttgaataagagggaagaagaatgtatattttaac 251  Q
    ||||||| || | ||       |||| ||||||||||||||||||  || || | |||||||||||    
T  42074385 ggggaggggaataaaaagttttctaatatgttttgaataagaggggggaggagtatatattttaac 42074450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 87 - 276
Target Start/End: Complemental strand, 721544 - 721352
Alignment:
Q  87 ttttttgctagattattagaaataataaaaaagaat-attgagggagtaaagtgtagattttaacataagannnnnnnn--atgtaattcaagcttctct 183  Q
    ||||||| |||||||||| ||| || || ||| ||| ||||||||||||||  |||||||||||||||| |          ||||||||||||||||| |    
T  721544 ttttttgttagattattataaaaaaaaataaaaaattattgagggagtaaaacgtagattttaacataaaatggaaggggaatgtaattcaagcttcttt 721445  T
Q  184 taggggaggagagtgaannnnnnnctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagaggagagtgtaattc 276  Q
     | ||||||||||||||       |||| |||||||||||||||||||||   | ||||||||||||  ||| | | |||| |||||||||||    
T  721444 caagggaggagagtgaaatattttctaatatgttttgaataagagggaagggaagtgtatattttaatataagaggggaggggagtgtaattc 721352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 151
Target Start/End: Original strand, 26808832 - 26808970
Alignment:
Q  13 aatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnnaagtgtgttaaattattatt----ttttgctagattattagaaa 108  Q
    |||||||||  |||||||||||||| |||||||||| |||| |||||         | |||||||| |||||||||    ||||||||||||||||||||    
T  26808832 aatatgtatacaattttttattatactaaaatagactcgcagtactattttttta-atgtgtgttagattattattatttttttgctagattattagaaa 26808930  T
Q  109 taataaaaaagaatattgagggagtaaagtgtagattttaaca 151  Q
    |||  ||||| |   |||| |||||||||||||||||||||||    
T  26808931 taaacaaaaaaa---ttgaaggagtaaagtgtagattttaaca 26808970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 120 - 192
Target Start/End: Original strand, 56309953 - 56310027
Alignment:
Q  120 aatattgagggagtaaagtgtagattttaacataag--annnnnnnnatgtaattcaagcttctcttaggggagg 192  Q
    |||||||||||||||||| |||||||||||||||||  |        ||||||||||||||||||||||||||||    
T  56309953 aatattgagggagtaaagcgtagattttaacataagaaaggaggggcatgtaattcaagcttctcttaggggagg 56310027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 87 - 156
Target Start/End: Original strand, 26705556 - 26705623
Alignment:
Q  87 ttttttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    |||||| ||| |||||||||||||| ||||||  ||||||||||| ||||| |||||||||||| |||||    
T  26705556 ttttttactaaattattagaaataaaaaaaaa--atattgagggactaaagcgtagattttaacttaaga 26705623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 156
Target Start/End: Original strand, 46076828 - 46076897
Alignment:
Q  86 attttttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    ||||||| ||||||||||| |||||| | |||| | ||||||||||||||| || ||||||||||||||||    
T  46076828 atttttttctagattattataaataa-ataaaatattattgagggagtaaaatgcagattttaacataaga 46076897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 192
Target Start/End: Original strand, 53306124 - 53306304
Alignment:
Q  13 aatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnnaagtgtgttaaattatta--ttttttgctagattattagaaata 110  Q
    |||||||||| || |||| |||||||||||||||||||||||||| |         || | ||||| ||||| |  ||||||||||||||||||||||||    
T  53306124 aatatgtattcaaattttgattatattaaaatagacccgcaatacca-ttttttttaattatgttagattatcaatttttttgctagattattagaaata 53306222  T
Q  111 ataaaaaagaatattgagggagtaaagtgtagattttaacat--aagannnnnnnnatgtaattcaagcttctcttaggggagg 192  Q
      |||||| | |||||||| |||||||| ||| | |||||||  |||         ||||||||||||||||||||||||||||    
T  53306223 --aaaaaaaattattgaggaagtaaagtttaggtcttaacataaaaggggaggggaatgtaattcaagcttctcttaggggagg 53306304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 165 - 247
Target Start/End: Complemental strand, 55814457 - 55814375
Alignment:
Q  165 atgtaattcaagcttctcttaggggaggagagtgaannnnnnnctaacatgttttgaataagagggaagaagaatgtatattt 247  Q
    ||||||||||||||||||| | ||||||||||||||       |||| |||||||||||||||||| ||   |||||||||||    
T  55814457 atgtaattcaagcttctctcaagggaggagagtgaaatattttctaagatgttttgaataagaggggagggaaatgtatattt 55814375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 257
Target Start/End: Original strand, 19854659 - 19854830
Alignment:
Q  87 ttttttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataag--annnnnnnnatgtaattcaagcttctctt 184  Q
    ||||||||| || ||||| ||||||||||| | || ||||| ||||||||||||||||| | |||||||           |||||||||||| || || |    
T  19854659 ttttttgctggaatattacaaataataaaagaaaa-attgacggagtaaagtgtagattcttacataagcagggaggagaatgtaattcaagattttcct 19854757  T
Q  185 aggggaggagagtgaannnnnnnctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaa 257  Q
    |||| |||||||||||       | || |||||||||||||||||| |||  ||||||||||||||| |||||    
T  19854758 agggaaggagagtgaaatgttttcaaatatgttttgaataagaggggagagaaatgtatattttaacataaaa 19854830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 93 - 156
Target Start/End: Original strand, 4649560 - 4649623
Alignment:
Q  93 gctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    |||||||||||||||||||   |||| | |||||||||||||||  ||||||||||| ||||||    
T  4649560 gctagattattagaaataaagtaaaacattattgagggagtaaaacgtagattttaaaataaga 4649623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 113 - 156
Target Start/End: Complemental strand, 6232513 - 6232470
Alignment:
Q  113 aaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    |||||| |||||||||||||||||||||| |||||||| |||||    
T  6232513 aaaaaaaaatattgagggagtaaagtgtatattttaacttaaga 6232470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 69 - 156
Target Start/End: Complemental strand, 13771951 - 13771870
Alignment:
Q  69 aagtgtgttaaattattattttttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    |||||||||| ||||||  |||||||||||||||||||||||| ||||||    ||| ||| | ||||| |||||||||||| |||||    
T  13771951 aagtgtgttagattatt--tttttgctagattattagaaataaaaaaaaa----attaaggaactaaagcgtagattttaacttaaga 13771870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 90 - 152
Target Start/End: Complemental strand, 54092393 - 54092330
Alignment:
Q  90 tttgctagattattagaaataataaaaa-agaatattgagggagtaaagtgtagattttaacat 152  Q
    |||| ||||||||||||||||| ||||| | || ||||||||| ||||| ||||||||||||||    
T  54092393 tttgttagattattagaaataaaaaaaataaaaaattgagggactaaagcgtagattttaacat 54092330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 156
Target Start/End: Complemental strand, 7165487 - 7165445
Alignment:
Q  114 aaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    ||||| |||||||||||||||||||||| |||||||| |||||    
T  7165487 aaaaaaaatattgagggagtaaagtgtatattttaacttaaga 7165445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 156
Target Start/End: Complemental strand, 12250765 - 12250723
Alignment:
Q  114 aaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    ||||| |||||||||||||||||||||| |||||||| |||||    
T  12250765 aaaaacaatattgagggagtaaagtgtatattttaacttaaga 12250723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 156
Target Start/End: Original strand, 13392735 - 13392777
Alignment:
Q  114 aaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    ||||| |||||||||||||||||||||| |||||||| |||||    
T  13392735 aaaaaaaatattgagggagtaaagtgtatattttaacttaaga 13392777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 156
Target Start/End: Original strand, 13395874 - 13395916
Alignment:
Q  114 aaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    ||||| |||||||||||||||||||||| |||||||| |||||    
T  13395874 aaaaaaaatattgagggagtaaagtgtatattttaacttaaga 13395916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 83 - 150
Target Start/End: Complemental strand, 20544466 - 20544401
Alignment:
Q  83 attatttttt-gctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaac 150  Q
    |||||||||| ||||||||||||||||||| || |||   |||||||||| ||||| ||||||||||||    
T  20544466 attattttttcgctagattattagaaataaaaacaaa---tattgagggactaaagcgtagattttaac 20544401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 276
Target Start/End: Original strand, 35667690 - 35667801
Alignment:
Q  165 atgtaattcaagcttctcttaggggaggagagtgaannnnnnnctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagagg 264  Q
    ||||||||||||||||||| | |||||| || ||||       |||| ||||||||||||||||||  |  || ||||||||||||| ||| | | ||||    
T  35667690 atgtaattcaagcttctctcaagggaggggaatgaaatattttctaatatgttttgaataagagggggggggagtgtatattttaacataagaggggagg 35667789  T
Q  265 agagtgtaattc 276  Q
     |||||||||||    
T  35667790 ggagtgtaattc 35667801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 156
Target Start/End: Original strand, 46096103 - 46096145
Alignment:
Q  114 aaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    ||||| |||||||||||||||||||||| |||||||| |||||    
T  46096103 aaaaaaaatattgagggagtaaagtgtatattttaacttaaga 46096145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 156
Target Start/End: Original strand, 46138604 - 46138646
Alignment:
Q  114 aaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    ||||| |||||||||||||||||||||| |||||||| |||||    
T  46138604 aaaaaaaatattgagggagtaaagtgtatattttaacttaaga 46138646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 156
Target Start/End: Complemental strand, 51267856 - 51267822
Alignment:
Q  122 tattgagggagtaaagtgtagattttaacataaga 156  Q
    |||||||||| ||||||||||||||||||||||||    
T  51267856 tattgagggaataaagtgtagattttaacataaga 51267822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 56
Target Start/End: Complemental strand, 7479609 - 7479580
Alignment:
Q  27 tttttattatattaaaatagacccgcaata 56  Q
    ||||||||||||||||||||||||||||||    
T  7479609 tttttattatattaaaatagacccgcaata 7479580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 276
Target Start/End: Original strand, 17730188 - 17730225
Alignment:
Q  239 tgtatattttaacttaaaaagagaggagagtgtaattc 276  Q
    ||||||||||||| ||||| ||||||||||||||||||    
T  17730188 tgtatattttaacataaaaggagaggagagtgtaattc 17730225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 148
Target Start/End: Original strand, 30558661 - 30558722
Alignment:
Q  87 ttttttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagatttta 148  Q
    ||||||| ||||||||||||||||| |||||| |  ||| |||||| ||| |||||||||||    
T  30558661 ttttttgttagattattagaaataaaaaaaaaaacaattaagggaggaaattgtagatttta 30558722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 156
Target Start/End: Complemental strand, 33046638 - 33046609
Alignment:
Q  127 agggagtaaagtgtagattttaacataaga 156  Q
    ||||||||||||||||||||||||||||||    
T  33046638 agggagtaaagtgtagattttaacataaga 33046609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 250
Target Start/End: Original strand, 755460 - 755545
Alignment:
Q  165 atgtaattcaagcttctcttaggggaggagagtgaannnnnnnctaacatgttttgaataagagggaagaagaatgtatattttaa 250  Q
    |||||||||||| |||| | | ||||||||||||||       |||| |||||||||||||||||||||   | ||||||||||||    
T  755460 atgtaattcaagtttctttcaagggaggagagtgaaatattttctaatatgttttgaataagagggaagggaagtgtatattttaa 755545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 166 - 198
Target Start/End: Complemental strand, 8138359 - 8138327
Alignment:
Q  166 tgtaattcaagcttctcttaggggaggagagtg 198  Q
    ||||||||||||||||||||||||||| |||||    
T  8138359 tgtaattcaagcttctcttaggggaggggagtg 8138327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 48
Target Start/End: Complemental strand, 12267823 - 12267783
Alignment:
Q  8 cgaagaatatgtattaaattttttattatattaaaatagac 48  Q
    |||| |||||||||| ||||||||||||||| |||||||||    
T  12267823 cgaaaaatatgtattcaattttttattatatgaaaatagac 12267783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 96 - 156
Target Start/End: Complemental strand, 28464406 - 28464347
Alignment:
Q  96 agattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    |||||||||||||| | ||| || | |||||||||| ||||| ||||||||||||||||||    
T  28464406 agattattagaaatgaaaaagaa-attattgagggactaaagcgtagattttaacataaga 28464347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 276
Target Start/End: Original strand, 35667260 - 35667328
Alignment:
Q  208 ctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagaggagagtgtaattc 276  Q
    |||| |||||||||||||||||| ||  || ||||||||||||| ||| | | |||| |||||||||||    
T  35667260 ctaatatgttttgaataagaggggaggggagtgtatattttaacataagaggggaggggagtgtaattc 35667328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 140; Significance: 2e-73; HSPs: 80)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 8 - 276
Target Start/End: Complemental strand, 10888012 - 10887742
Alignment:
Q  8 cgaagaatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnnaagtgtgttaaattattattttttgctagattattagaa 107  Q
    |||| |||||||||| ||||||||||||||||||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||    
T  10888012 cgaaaaatatgtattcaattttttattatattaaaatagacccgcaatactatttttttttaagtgtgttaaattattattttttgctagattattagaa 10887913  T
Q  108 ataataaaaaagaatattgagggagtaaagtgtagattttaacataaga--nnnnnnnnatgtaattcaagcttctcttaggggaggagagtgaannnnn 205  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||| |||||||         
T  10887912 ataataaaaaagaatattgagggagtaaagtgtagattttaacataagaggggagggggatgtaattcaagcttctcttaggggaggggagtgaaatttt 10887813  T
Q  206 nnctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagaggagagtgtaattc 276  Q
      |||| |||||||||||||||||| ||  || ||||||||||||||||| | | |||| |||||||||||    
T  10887812 ttctaatatgttttgaataagaggggaggggagtgtatattttaacttaagaggggaggggagtgtaattc 10887742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 8 - 276
Target Start/End: Complemental strand, 4757295 - 4757027
Alignment:
Q  8 cgaagaatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnnaagtgtgttaaattattattttttgctagattattagaa 107  Q
    |||| |||||||||| ||||||||||||||||||||||||||||||||||||         |||||||||||||||||| ||||||||||| ||||||||    
T  4757295 cgaaaaatatgtattcaattttttattatattaaaatagacccgcaatactattttttt--aagtgtgttaaattattaatttttgctagaatattagaa 4757198  T
Q  108 ataataaaaaagaatattgagggagtaaagtgtagattttaacataaga--nnnnnnnnatgtaattcaagcttctcttaggggaggagagtgaannnnn 205  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||| |||||||         
T  4757197 ataataaaaaagaatattgagggagtaaagtgtagattttaacataagagtggaggagaatgtaattcaagcttctcttaggggaggggagtgaaatttt 4757098  T
Q  206 nnctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagaggagagtgtaattc 276  Q
      |||| |||||||||||||||||| |   || ||||||||||||||||| | | ||||||||||||||||    
T  4757097 ttctaatatgttttgaataagaggggatgggagtgtatattttaacttaagaggggaggagagtgtaattc 4757027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 13 - 275
Target Start/End: Complemental strand, 22129983 - 22129720
Alignment:
Q  13 aatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnnaagtgtgttaaattattattttttgctagattattagaaataat 112  Q
    |||||||||| ||||||||||||||||||||||||||||||||| ||         ||||||||||||||||||||||||||||||||||||||||||||    
T  22129983 aatatgtattcaattttttattatattaaaatagacccgcaataatatttttttt-aagtgtgttaaattattattttttgctagattattagaaataat 22129885  T
Q  113 aaaaaagaatattgagggagtaaagtgtagattttaacataaga--nnnnnnnnatgtaattcaagcttctcttaggggaggagagtgaannnnnnncta 210  Q
    ||||||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||| | |||||       |||    
T  22129884 aaaaaagaatattgagggagtaaagtgtagattttaacataagaggggagggggatgtaattcaagcttctcttaggggaggggggtgaaattttttcta 22129785  T
Q  211 acatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagaggagagtgtaatt 275  Q
    | |||||||||||||||||| ||  || ||||||||||||||||| | | |||| ||||||||||    
T  22129784 atatgttttgaataagaggggaggggagtgtatattttaacttaagaggggaggggagtgtaatt 22129720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 8 - 276
Target Start/End: Complemental strand, 37183379 - 37183110
Alignment:
Q  8 cgaagaatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnnaagtgtgttaaattattattttttgctagattattagaa 107  Q
    |||| |||||||||| ||||||||||||||||||||||||||||||||||||         |||||||||||||||||||||||| ||||||||||||||    
T  37183379 cgaaaaatatgtattcaattttttattatattaaaatagacccgcaatactatttttttttaagtgtgttaaattattatttttt-ctagattattagaa 37183281  T
Q  108 ataataaaaaagaatattgagggagtaaagtgtagattttaacataaga--nnnnnnnnatgtaattcaagcttctcttaggggaggagagtgaannnnn 205  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||          |||| ||||||||||||||||||| ||| |||||||         
T  37183280 ataataaaaaagaatattgagggagtaaagtgtagattttaacataagaggggagggggatgttattcaagcttctcttagggcaggggagtgaaatttt 37183181  T
Q  206 nnctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagaggagagtgtaattc 276  Q
      |||| |||||||||||||||||| ||  || ||||||||||||||||| | | |||| |||||||||||    
T  37183180 ttctaatatgttttgaataagaggggaggggagtgtatattttaacttaagaggggaggggagtgtaattc 37183110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 8 - 276
Target Start/End: Complemental strand, 4558333 - 4558064
Alignment:
Q  8 cgaagaatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnnaagtgtgttaaattattattttttgctagattattagaa 107  Q
    |||| |||||||||| ||||||||||||||||||||||||||||||||| ||         |||||||||||||||||||||||||||||||||||||||    
T  4558333 cgaaaaatatgtattcaattttttattatattaaaatagacccgcaataatattttttta-aagtgtgttaaattattattttttgctagattattagaa 4558235  T
Q  108 ataataaaaaagaatattgagggagtaaagtgtagattttaacataaga--nnnnnnnnatgtaattcaagcttctcttaggggaggagagtgaannnnn 205  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||| || || |         
T  4558234 ataataaaaaagaatattgagggagtaaagtgtagattttaacataagaggggagggggatgtaattcaagcttctcttaggggaggggaatgtaaattt 4558135  T
Q  206 nnctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagaggagagtgtaattc 276  Q
      |||| |||||||||||||||||| ||  || ||||||||||||||||| | | |||| |||||||||||    
T  4558134 ttctaatatgttttgaataagaggggaggggagtgtatattttaacttaagaggggaggggagtgtaattc 4558064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 8 - 276
Target Start/End: Complemental strand, 22524420 - 22524150
Alignment:
Q  8 cgaagaatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnnaagtgtgttaaattattattttttgctagattattagaa 107  Q
    |||| |||||||||| ||| |||||||||||||||||||||||||| |||||         |||||||||||||||||||||||||||||||||||||||    
T  22524420 cgaaaaatatgtattcaatgttttattatattaaaatagacccgcactactatttttttttaagtgtgttaaattattattttttgctagattattagaa 22524321  T
Q  108 ataataaaaaagaatattgagggagtaaagtgtagattttaacataaga--nnnnnnnnatgtaattcaagcttctcttaggggaggagagtgaannnnn 205  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||| |||||||         
T  22524320 ataataaaaaagaatattgagggagtaaagtgtagattttaacataagaggggagggggatgtaattcaagcttctcttaggggaggggagtgaaaattt 22524221  T
Q  206 nnctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagaggagagtgtaattc 276  Q
      |||| |||||||||||||||||| ||   | ||||| ||||||||||| | | |||  |||||||||||    
T  22524220 ttctaatatgttttgaataagaggggagggaagtgtatcttttaacttaagaggggagaggagtgtaattc 22524150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 8 - 276
Target Start/End: Original strand, 14601883 - 14602154
Alignment:
Q  8 cgaagaatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnn-aagtgtgttaaattattattttttgctagattattaga 106  Q
    |||| |||||| ||| ||||||||||||||||||||||||| ||||||||||          |||||||||||||||||||||||||||  |||||||||    
T  14601883 cgaaaaatatgcattcaattttttattatattaaaatagactcgcaatactattttttttttaagtgtgttaaattattattttttgctcaattattaga 14601982  T
Q  107 aataataaaaaagaatattgagggagtaaagtgtagattttaacataaga--nnnnnnnnatgtaattcaagcttctcttaggggaggagagtgaannnn 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||| || |||||        
T  14601983 aataataaaaaagaatattgagggagtaaagtgtagattttaacataagaggggagggggatgtaattcaagcttctcttaggggagcagggtgaaattt 14602082  T
Q  205 nnnctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagaggagagtgtaattc 276  Q
       |||| |||||||||||||||||| ||  || ||||||||||||||||| | | ||||  ||||||||||    
T  14602083 tttctaatatgttttgaataagaggggaggggagtgtatattttaacttaagaggggagggaagtgtaattc 14602154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 8 - 276
Target Start/End: Original strand, 23309394 - 23309664
Alignment:
Q  8 cgaagaatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnnaagtgtgttaaattattatttt-ttgctagattattaga 106  Q
    |||| |||||||||| ||||||||||||||||||||||||||||||| | |          |||||||||||||||||||||| ||||||||||||||||    
T  23309394 cgaaaaatatgtattcaattttttattatattaaaatagacccgcaa-atttattttttttaagtgtgttaaattattatttttttgctagattattaga 23309492  T
Q  107 aataataaaaaagaatattgagggagtaaagtgtagattttaacataaga--nnnnnnnnatgtaattcaagcttctcttaggggaggagagtgaannnn 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||||  ||||||        
T  23309493 aataataaaaaagaatattgagggagtaaagtgtagattttaacataagaggggagaggaatgtaattcaagcttctcttaggggagggaagtgaaattt 23309592  T
Q  205 nnnctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagaggagagtgtaattc 276  Q
       |||| |||||||||||||||||| ||  || |||||||||||| |||| |   |||| |||||||||||    
T  23309593 tttctaatatgttttgaataagaggggaggggagtgtatattttaagttaagagaggaggggagtgtaattc 23309664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 24 - 230
Target Start/End: Original strand, 24542773 - 24542979
Alignment:
Q  24 aattttttattatattaaaatagacccgcaatactannnnnnnnnaagtgtgttaaattattattttttgctagattattagaaataataaaaaagaata 123  Q
    ||||||||||||||||||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24542773 aattttttattatattaaaatagacccgcaatactattttttt--aagtgtgttaaattattattttttgctagattattagaaataataaaaaagaata 24542870  T
Q  124 ttgagggagtaaagtgtagattttaacataaga--nnnnnnnnatgtaattcaagcttctcttaggggaggagagtgaannnnnnnctaacatgttttga 221  Q
    |||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||| || || |       |||| |||||||||    
T  24542871 ttgagggagtaaagtgtagattttaacataagaggggagggggatgtaattcaagcttctcttaggggaggggaatgtaattttttctaatatgttttga 24542970  T
Q  222 ataagaggg 230  Q
    |||||||||    
T  24542971 ataagaggg 24542979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 69 - 275
Target Start/End: Complemental strand, 11056033 - 11055824
Alignment:
Q  69 aagtgtgttaaattattatttttt-gctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga--nnnnnnnna 165  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||          |    
T  11056033 aagtgtgttaaattattatttttttgctaggttattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataagaggggaggggaa 11055934  T
Q  166 tgtaattcaagcttctcttaggggaggagagtgaannnnnnnctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagagga 265  Q
    ||||||||||||||||||||||||||| |||||||       |||| |||| ||||||||||||| ||  || ||||||||||||||||| | | ||||     
T  11055933 tgtaattcaagcttctcttaggggaggggagtgaaattttttctaatatgtattgaataagaggggaggggagtgtatattttaacttaagaggggaggg 11055834  T
Q  266 gagtgtaatt 275  Q
    ||||||||||    
T  11055833 gagtgtaatt 11055824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 83 - 276
Target Start/End: Original strand, 32737020 - 32737215
Alignment:
Q  83 attattttttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga--nnnnnnnnatgtaattcaagcttc 180  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||          ||||||||||||||||    
T  32737020 attattttttgccagattattagaaataataaaaaagaatattgagggagtaaaatgtagattttaacataagaggggaggtggatgtaattcaagcttc 32737119  T
Q  181 tcttaggggaggagagtgaannnnnnnctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagaggagagtgtaattc 276  Q
    |||||||||||| |||||||       |||| |||||||||||||||||| ||  || ||||||||||||||||||| | ||||| ||||||||||    
T  32737120 tcttaggggaggggagtgaaattttttctaatatgttttgaataagaggggaggggagtgtatattttaacttaaaaggggaggaaagtgtaattc 32737215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 8 - 251
Target Start/End: Original strand, 54404008 - 54404250
Alignment:
Q  8 cgaagaatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnnaagtgtgttaaattattatt-ttttgctagattattaga 106  Q
    |||| |||||||||| ||||||||||||||||||||||||| ||||||||||         |||||||||| ||||||||| ||||||||||||||||||    
T  54404008 cgaaaaatatgtattcaattttttattatattaaaatagactcgcaatactatttttttcgaagtgtgttagattattattattttgctagattattaga 54404107  T
Q  107 aataataaaaaagaatattgagggagtaaagtgtagattttaacataaga--nnnnnnnnatgtaattcaagcttctcttaggggaggagagtgaannnn 204  Q
    ||||| |||||    |||||||||||||||||||||||||||||||||||           |||||||||||||||||||| |||||| || ||||        
T  54404108 aataaaaaaaa----tattgagggagtaaagtgtagattttaacataagaggggaggggagtgtaattcaagcttctcttaagggaggggaatgaaattt 54404203  T
Q  205 nnnctaacatgttttgaataagagggaagaagaatgtatattttaac 251  Q
       |||| |||||||||||||||||| ||  ||||||||||||||||    
T  54404204 tttctaatatgttttgaataagaggggaggggaatgtatattttaac 54404250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 69 - 156
Target Start/End: Original strand, 41865520 - 41865607
Alignment:
Q  69 aagtgtgttaaattattattttttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  41865520 aagtgtgttaaattattattttttgctagattattagaaataataaaaatgaatattgagggagtaaagtgtagattttaacataaga 41865607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 24 - 230
Target Start/End: Complemental strand, 44499614 - 44499408
Alignment:
Q  24 aattttttattatattaaaatagacccgcaatactannnnnnnnn-aagtgtgttaaattattatttt-ttgctagattattagaaataataaaaaagaa 121  Q
    ||||||||||||||||||||||||||||||||||||          ||||||||||||||||||| || ||||||||||||||||||||| |||||        
T  44499614 aattttttattatattaaaatagacccgcaatactattttttttcgaagtgtgttaaattattatattgttgctagattattagaaataaaaaaaa---- 44499519  T
Q  122 tattgagggagtaaagtgtagattttaacata--agannnnnnnnatgtaattcaagcttctcttaggggaggagagtgaannnnnnnctaacatgtttt 219  Q
    ||||||||||||||||||||||||||||||||  |||        ||||||||||||||||||||| |||||| |||||||       |||| |||||||    
T  44499518 tattgagggagtaaagtgtagattttaacataagagaggagatgaatgtaattcaagcttctcttaagggaggggagtgaaaagtattctaatatgtttt 44499419  T
Q  220 gaataagaggg 230  Q
    |||||||||||    
T  44499418 gaataagaggg 44499408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 13 - 251
Target Start/End: Complemental strand, 1363676 - 1363439
Alignment:
Q  13 aatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnnaagtgtgttaaattattattttttg-ctagattattagaaataa 111  Q
    |||||||||| || |||| |||||||||||||||||| |||||||||         |||||||||| || ||||||||||| ||||||| |||||||  |    
T  1363676 aatatgtattcaaattttgattatattaaaatagacctgcaatactattttttccaaagtgtgttagataattattttttggctagatttttagaaa--a 1363579  T
Q  112 taaaaaagaatattgagggagtaaagtgtagattttaacataagannnnnnnn--atgtaattcaagcttctcttaggggaggagagtgaannnnnnnct 209  Q
    |||||||  |||||  |||||||||||||||||||||||||||||          |||||||||||||||||||||||||||| |||||||       ||    
T  1363578 taaaaaa--atattaggggagtaaagtgtagattttaacataagaatggagatgaatgtaattcaagcttctcttaggggaggggagtgaaatgttttct 1363481  T
Q  210 aacatgttttgaataagagggaagaagaatgtatattttaac 251  Q
    || ||| |||||||||||||| || |||||||||||||||||    
T  1363480 aatatgctttgaataagaggggaggagaatgtatattttaac 1363439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 8 - 156
Target Start/End: Original strand, 27394847 - 27394997
Alignment:
Q  8 cgaagaatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnn---aagtgtgttaaattattatttttt-gctagattatt 103  Q
    |||| ||||| |||| ||||||||||||||||||||||||||||||||||||            |||||||||||||||||||||||| |||| ||||||    
T  27394847 cgaaaaatatttattcaattttttattatattaaaatagacccgcaatactactttttttttttaagtgtgttaaattattatttttttgctaaattatt 27394946  T
Q  104 agaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    |||||||| ||||||  ||||||||||||||||||||||||||||||||||||    
T  27394947 agaaataaaaaaaaa--atattgagggagtaaagtgtagattttaacataaga 27394997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 7 - 155
Target Start/End: Original strand, 27397295 - 27397442
Alignment:
Q  7 tcgaagaatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnnaagtgtgttaaattattatt-ttttgctagattattag 105  Q
    ||||| |||||||||| |||||||||||||||||||||||||| |||||||||         |||||||||| ||||||||| |||| ||| ||||||||    
T  27397295 tcgaaaaatatgtattcaattttttattatattaaaatagacctgcaatactatttttttcgaagtgtgttatattattattatttttctaaattattag 27397394  T
Q  106 aaataataaaaaagaatattgagggagtaaagtgtagattttaacataag 155  Q
    |||||| ||| ||  |||||||||||||||||||||||||||| ||||||    
T  27397395 aaataaaaaataa--atattgagggagtaaagtgtagattttaccataag 27397442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 69 - 276
Target Start/End: Original strand, 54606256 - 54606468
Alignment:
Q  69 aagtgtgttaaattattatttttt-gctagattattagaaataa--taaaaaagaatattgagggagtaaagtgtagattttaacataaga--nnnnnnn 163  Q
    |||||||||| ||||||||||||| |||||||||||| ||||||  ||||||  |||||||| ||||||||||||||||||||||||||||             
T  54606256 aagtgtgttagattattatttttttgctagattattaaaaataaaataaaaattaatattgatggagtaaagtgtagattttaacataagaggggagggg 54606355  T
Q  164 natgtaattcaagcttctcttaggggaggagagtgaannnnnnnctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagag 263  Q
      |||||||||||||| |||||||||||| |||||||       | || | |||||||||||||||| ||  || ||||||||||||| ||| | |||||    
T  54606356 agtgtaattcaagcttatcttaggggaggggagtgaaaaaaattcaaataagttttgaataagaggggaggggagtgtatattttaacataagaggagag 54606455  T
Q  264 gagagtgtaattc 276  Q
    | |||||||||||    
T  54606456 gggagtgtaattc 54606468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 13 - 192
Target Start/End: Complemental strand, 11582163 - 11581983
Alignment:
Q  13 aatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnn-aagtgtgttaaattattatttttt-gctagattattagaaata 110  Q
    |||||||||| || ||||  |||||||||||||||||||||||||||          |||||||||| ||||||||||||| ||||||||||||||||||    
T  11582163 aatatgtattcaaattttggttatattaaaatagacccgcaatactatttgttttcgaagtgtgttagattattatttttttgctagattattagaaata 11582064  T
Q  111 ataaaaaagaatattgagggagtaaagtgtagattttaacata--agannnnnnnnatgtaattcaagcttctcttaggggagg 192  Q
    | |||||    |||||| |||||||||||||||||||||||||  |||        ||||||||||||||||||||||||||||    
T  11582063 aaaaaaat---tattgaaggagtaaagtgtagattttaacataagagaggaggggaatgtaattcaagcttctcttaggggagg 11581983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 8 - 276
Target Start/End: Complemental strand, 40974332 - 40974068
Alignment:
Q  8 cgaagaatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnnaagtgtgttaaattattatt--ttttgctagattattag 105  Q
    |||| |||||||||| ||||||||||||| |||||||||||||  ||||| |         |||||||||| |||||||||  |||||||||||||||||    
T  40974332 cgaaaaatatgtattcaattttttattat-ttaaaatagacccataatac-aattttttcgaagtgtgttagattattattatttttgctagattattag 40974235  T
Q  106 aaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga--nnnnnnnnatgtaattcaagcttctcttaggggaggagagtgaannn 203  Q
    |||||| ||||     |||||||||||||||||||||||||||  ||||||          |||||||||||||||||||||||||||| | |||||       
T  40974234 aaataaaaaaa-----tattgagggagtaaagtgtagattttattataagagggaagatgaatgtaattcaagcttctcttaggggagg-gtgtgaaaag 40974141  T
Q  204 nnnnctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagaggagagtgtaattc 276  Q
        |||| |||||||||||||||||| ||  || ||||||||||||| ||| | | |||| |||||||||||    
T  40974140 ttttctaatatgttttgaataagaggggaggggattgtatattttaacataagaggggaggggagtgtaattc 40974068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 69 - 251
Target Start/End: Complemental strand, 6293445 - 6293263
Alignment:
Q  69 aagtgtgttaaattattattttttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga--nnnnnnnnat 166  Q
    |||||||||| ||| | ||| |||||||||||||||||||||| ||||||  |||||||| || ||||||||||||||||||||||||          ||    
T  6293445 aagtgtgttagattttaattatttgctagattattagaaataaaaaaaaa--atattgagagattaaagtgtagattttaacataagaggggaggggaat 6293348  T
Q  167 gtaattcaagcttctcttaggggaggagagtgaannnnnnnctaacatgttttgaataagagggaagaagaatgtatattttaac 251  Q
    |||||||||||||||||||||||||| |||||||       |||| || ||||||||||||| | ||  || |||||||||||||    
T  6293347 gtaattcaagcttctcttaggggaggggagtgaaaaaaattctaatatattttgaataagagaggagcggagtgtatattttaac 6293263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 8 - 260
Target Start/End: Original strand, 45241618 - 45241871
Alignment:
Q  8 cgaagaatatgtattaaattttttattatattaaaatagacccgcaatacta-nnnnnnnnnaagtgtgttaaattatta--ttttttgctagattatta 104  Q
    |||| |||||||||| |||||||||||||||||||||||||||| ||||| |          |||||||||| |||||||   ||||||||| |||||||    
T  45241618 cgaaaaatatgtattcaattttttattatattaaaatagacccgtaatacaatttttttccgaagtgtgttagattattactatttttgctaaattatta 45241717  T
Q  105 gaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga--nnnnnnnnatgtaattcaagcttctcttaggggaggagagtgaann 202  Q
    ||   ||||||||  || ||||||||||||||||| ||||||||||||||||          ||||||||||||||||||||||| ||  |||||| |      
T  45241718 ga---aataaaaagaaaaattgagggagtaaagtgcagattttaacataagaggggaggggaatgtaattcaagcttctcttaggaga-aagagtgtaaa 45241813  T
Q  203 nnnnnctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaaaga 260  Q
         |||| ||||||||||||||||||||| ||| | ||||||||||| ||||||||    
T  45241814 gttttctaatatgttttgaataagagggaaggagattatatattttaacataaaaaga 45241871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 69 - 276
Target Start/End: Original strand, 48223977 - 48224181
Alignment:
Q  69 aagtgtgttaaattattattttttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga--nnnnnnnnat 166  Q
    |||| ||||| ||||||||||||||||||||||||||||||     |||| |||||||||||||||||| ||||||||||||||||||          ||    
T  48223977 aagtatgttagattattattttttgctagattattagaaat-----aaaaaaatattgagggagtaaagagtagattttaacataagaggggaggggaat 48224071  T
Q  167 gtaattcaagcttctcttaggggaggagagtgaannnnnnnctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagaggag 266  Q
    ||||||||||||||||| | ||||||||||||||       |||| | |||||||| ||||||| ||   | ||||||||||||| ||| | | |||| |    
T  48224072 gtaattcaagcttctctcaagggaggagagtgaaatattttctaataggttttgaaaaagaggggagggaagtgtatattttaacataagatgggagggg 48224171  T
Q  267 agtgtaattc 276  Q
    ||||||||||    
T  48224172 agtgtaattc 48224181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 27 - 156
Target Start/End: Original strand, 19546822 - 19546952
Alignment:
Q  27 tttttattatattaaaatagacccgcaatactannnnnnnnnaagtgtgttaaattattatt-ttttgctagattattagaaataataaaaaagaatatt 125  Q
    |||| ||||||||||| |||||||||||| |||         |||||| ||| ||||||||| |||||||||||||||||||||  |  |||| ||||||    
T  19546822 ttttgattatattaaagtagacccgcaatcctaattttttcgaagtgtattagattattattattttgctagattattagaaattttttaaaaaaatatt 19546921  T
Q  126 gagggagtaaagtgtagattttaacataaga 156  Q
    |||||||||||||||||||||||||||||||    
T  19546922 gagggagtaaagtgtagattttaacataaga 19546952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 13 - 276
Target Start/End: Original strand, 2756398 - 2756651
Alignment:
Q  13 aatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnnaagtgtgttaaattatta--ttttttgctagattattagaaata 110  Q
    |||||||||| || |||| ||||||||||||||||||||||||| ||         |||||||||  |||||||  ||||||||||||||||||||||||    
T  2756398 aatatgtattcaaattttgattatattaaaatagacccgcaatattatttttttcgaagtgtgttcgattattagtttttttgctagattattagaaata 2756497  T
Q  111 ataaaaaagaatattgagggagtaaagtgtagattttaacataagannnnnnnnatgtaattcaagcttctcttaggggaggagagtgaannnnnnncta 210  Q
    | ||||     ||||||||| |||||||||||||||| ||| |||         |||||||||||||||||||||| | ||| | |||||       |||    
T  2756498 aaaaaat----tattgagggggtaaagtgtagattttgacacaag-------gaatgtaattcaagcttctcttagagaagg-gggtgaaaccttttcta 2756585  T
Q  211 acatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagaggagagtgtaattc 276  Q
    | ||||||||||||||| |||||  || ||||||||||||| ||| | | |||| |||||||||||    
T  2756586 atatgttttgaataagatggaaggggagtgtatattttaacataagaggggaggggagtgtaattc 2756651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 8 - 156
Target Start/End: Complemental strand, 40036039 - 40035893
Alignment:
Q  8 cgaagaatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnnaagtgtgttaaattattatt--ttttgctagattattag 105  Q
    |||| |||||||||| ||||| ||||||| |||||||||||||  |||||||         |||||||||| |||||| ||  |||||||||||||||||    
T  40036039 cgaaaaatatgtattcaatttcttattattttaaaatagacccataatactatttttttt-aagtgtgttagattattgttatttttgctagattattag 40035941  T
Q  106 aaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    |||||| ||||||   |||||| ||||||||||||||||||||||||||||    
T  40035940 aaataaaaaaaaa---tattgaaggagtaaagtgtagattttaacataaga 40035893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 8 - 276
Target Start/End: Complemental strand, 40927793 - 40927525
Alignment:
Q  8 cgaagaatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnn-aagtgtgttaaattattatt-ttttgctagattattag 105  Q
    |||| |||||||||| || ||||||||||||||||||||| |||||||| ||          |||||||||| ||||||||| |||||||||||||||||    
T  40927793 cgaaaaatatgtattcaaatttttattatattaaaatagatccgcaatattatttttttccgaagtgtgttagattattattcttttgctagattattag 40927694  T
Q  106 aaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga--nnnnnnnnatgtaattcaagcttctcttaggggaggagagtgaannn 203  Q
    |||| | ||||     |||||||||| ||||||||||||||||||||||||          ||||||||||||||||||||| ||||||  ||||||       
T  40927693 aaatgaaaaaat----tattgagggattaaagtgtagattttaacataagaggagagaggaatgtaattcaagcttctcttaagggagggaagtgaaata 40927598  T
Q  204 nnnnctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagaggagagtgtaattc 276  Q
        |||| |  ||||||||||||||| ||  || ||||||||||||| ||| | | ||||  ||||||||||    
T  40927597 ttttctaataaattttgaataagaggggaggggagtgtatattttaacataagaggggagggaagtgtaattc 40927525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 71 - 156
Target Start/End: Original strand, 45307194 - 45307280
Alignment:
Q  71 gtgtgttaaattatta--ttttttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    |||||||| |||||||  ||||||| ||||||||||||||||| |||||| ||||||||||||||||||||| |||||||||||||||    
T  45307194 gtgtgttagattattaatttttttgttagattattagaaataaaaaaaaa-aatattgagggagtaaagtgtggattttaacataaga 45307280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 10 - 156
Target Start/End: Original strand, 291561 - 291705
Alignment:
Q  10 aagaatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnnaagtgtgttaaattattat-tttttgctagattattagaaa 108  Q
    ||||||||||||| || ||||||||||||||||||||||||||||   |          |||| ||||| |||||||| ||||| |||||||||||||||    
T  291561 aagaatatgtattcaaatttttattatattaaaatagacccgcaacgttttttttcccaaagtatgttagattattatattttttctagattattagaaa 291660  T
Q  109 taataaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    ||| ||||||   |||||||||| |||||||||||||||||| |||||    
T  291661 taaaaaaaaa---tattgagggattaaagtgtagattttaacttaaga 291705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 27 - 156
Target Start/End: Original strand, 19562468 - 19562600
Alignment:
Q  27 tttttattatattaaaatagacccgcaatactannnnnnnnnaagtgtgttaaattattatt-ttttgctagattattagaaataataaaaaagaa--ta 123  Q
    |||| ||||||||||||||| ||||||||||||         || ||| ||| ||||||||| ||||||||||||||||||||| | |||||| ||  ||    
T  19562468 ttttgattatattaaaataggcccgcaatactatttttttcgaactgtattagattattattgttttgctagattattagaaattaaaaaaaaaaaatta 19562567  T
Q  124 ttgagggagtaaagtgtagattttaacataaga 156  Q
    ||||||||||||| |||||||||||||||||||    
T  19562568 ttgagggagtaaaatgtagattttaacataaga 19562600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 14 - 156
Target Start/End: Complemental strand, 22517256 - 22517116
Alignment:
Q  14 atatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnn-aagtgtgttaaattattattttttgctagattattagaaataat 112  Q
    ||||||||| || |||| ||||||||||||||||||||||| ||||          |||||||||| |||||||||||||| |||||| ||||||||||     
T  22517256 atatgtattcaaattttgattatattaaaatagacccgcaacactattttttttcgaagtgtgttagattattattttttgttagattgttagaaataa- 22517158  T
Q  113 aaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
      |||| | ||||||||||||||| | |||||||||||||||||    
T  22517157 --aaaatattattgagggagtaaaatatagattttaacataaga 22517116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 83 - 276
Target Start/End: Complemental strand, 3089974 - 3089782
Alignment:
Q  83 attattttttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga--nnnnnnnnatgtaattcaagcttc 180  Q
    |||||||||| |||||||||||||||||| ||||||   |||||||||| ||||| |||||||||||| |||||          ||||||||||||||||    
T  3089974 attatttttttctagattattagaaataaaaaaaaa---tattgagggactaaagcgtagattttaacttaagaggggaggtgaatgtaattcaagcttc 3089878  T
Q  181 tcttaggggaggagagtgaannnnnnnctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagaggagagtgtaattc 276  Q
    ||| | |||||| |||||||       |||| |||||||||||||||||| ||  || ||||||||||||| ||| | | ||||  ||||||||||    
T  3089877 tctcaagggaggggagtgaaatattttctaatatgttttgaataagaggggaggggagtgtatattttaacataagaggggagggaagtgtaattc 3089782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 87 - 276
Target Start/End: Complemental strand, 11344912 - 11344723
Alignment:
Q  87 ttttttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga--nnnnnnnnatgtaattcaagcttctctt 184  Q
    ||||||||||||||||||||||||| ||||||  ||||||||||| ||||| |||||||||||| |||||          |||||||||||||||||||     
T  11344912 ttttttgctagattattagaaataaaaaaaaa--atattgagggactaaagcgtagattttaacttaagagggaagggtaatgtaattcaagcttctctc 11344815  T
Q  185 aggggaggagagtgaannnnnnnctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagaggagagtgtaattc 276  Q
    | |||||| | |||||       |||| |||||||||||||||||| || ||  ||||||||||| | ||| | | |||| |||||||||||    
T  11344814 aagggaggggggtgaaatattttctaatatgttttgaataagaggggaggagggtgtatattttagcataagaggggaggggagtgtaattc 11344723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 69 - 156
Target Start/End: Complemental strand, 33314308 - 33314221
Alignment:
Q  69 aagtgtgttaaattattattttttg-ctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    |||||||||| |||||| ||||||| ||||||||||| |||||| |||||| |||||| ||||||||||||||||||||||| ||||||    
T  33314308 aagtgtgttagattatttttttttggctagattattaaaaataaaaaaaaa-aatattaagggagtaaagtgtagattttaagataaga 33314221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 72 - 251
Target Start/End: Complemental strand, 18480336 - 18480153
Alignment:
Q  72 tgtgttaaattattatt-ttttgctagattattagaaataataaaaaagaat-attgagggagtaaagtgtagattttaacataaga--nnnnnnnnatg 167  Q
    ||||||| ||||||||| ||||||| |||||||||||||  ||||||| ||| |||||||||||||| |||||||||||||||||||          |||    
T  18480336 tgtgttagattattattgttttgcttgattattagaaattttaaaaaaaaattattgagggagtaaaatgtagattttaacataagagggaagcgaaatg 18480237  T
Q  168 taattcaagcttctcttaggggaggagagtgaannnnnnnctaacatgttttgaataagagggaagaagaatgtatattttaac 251  Q
    ||||| ||||||||| ||| |||||||||| ||       |||| | |||||||||||||||| ||  |||||| |||||||||    
T  18480236 taattgaagcttctcctagtggaggagagtaaaatgttttctaataagttttgaataagaggggaggggaatgtttattttaac 18480153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 89 - 251
Target Start/End: Complemental strand, 5963276 - 5963114
Alignment:
Q  89 ttttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga--nnnnnnnnatgtaattcaagcttctcttag 186  Q
    |||| |||||||||||||||||| |||||   ||||||| |||||||||||||||| |||||||||||          |||||||||||||||||||| |    
T  5963276 tttttctagattattagaaataaaaaaaat--atattgatggagtaaagtgtagatattaacataagaggggaggggaatgtaattcaagcttctcttgg 5963179  T
Q  187 gggaggagagtgaannnnnnnctaacatgttttgaataagagggaagaagaatgtatattttaac 251  Q
    |||||| | |||||       |||| |||||||||||||||||| ||  || |||||||||||||    
T  5963178 gggaggggtgtgaaaaaatttctaatatgttttgaataagaggggaggggagtgtatattttaac 5963114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 73 - 200
Target Start/End: Original strand, 25481039 - 25481164
Alignment:
Q  73 gtgttaaattattattttttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga-nnnnnnnnatgtaat 171  Q
    |||||| |||||| ||||||||||||||||||||||||  |||||| | |||||||||| ||||  ||||||||||||||||||         |||||||    
T  25481039 gtgttagattatt-ttttttgctagattattagaaata--aaaaaaaattattgagggactaaatcgtagattttaacataagagagaggggaatgtaat 25481135  T
Q  172 tcaagcttctcttaggggaggagagtgaa 200  Q
    |||||||||||| | ||||||||||||||    
T  25481136 tcaagcttctctcaagggaggagagtgaa 25481164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 13 - 152
Target Start/End: Complemental strand, 30604970 - 30604833
Alignment:
Q  13 aatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnnaagtgtgttaaattattatttttt-gctagattattagaaataa 111  Q
    |||||||||| || |||| |||||||||||||||||||||| |||||         ||||| |||| ||||||||||||| | |||||||||||||||||    
T  30604970 aatatgtattcaaattttgattatattaaaatagacccgcagtactatttttttagaagtgcgttagattattatttttttggtagattattagaaataa 30604871  T
Q  112 taaaaaagaatattgagggagtaaagtgtagattttaacat 152  Q
     |||| |   |||||||||| |||| |||||| ||||||||    
T  30604870 aaaaata---tattgagggattaaattgtagaatttaacat 30604833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 72 - 276
Target Start/End: Complemental strand, 1763877 - 1763675
Alignment:
Q  72 tgtgttaaattattatttttt-gctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataagannnnnnnn--atgt 168  Q
    ||||||| ||||||||||||| | ||||||||||||||||| ||||| |    ||||| |||||||||||||||||||||| ||||          ||||    
T  1763877 tgtgttagattattatttttttgatagattattagaaataaaaaaaatg----ttgagagagtaaagtgtagattttaacacaagagaggagaagaatgt 1763782  T
Q  169 aattcaagcttctcttaggggaggagagtgaannnnnnnctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagaggagag 268  Q
    | |||||| || ||||| |||||| |||| ||        ||| |||||||||||||||||| || ||| ||||||||||||| ||||||| ||||| ||    
T  1763781 agttcaagattttcttaagggaggggagtaaatgttttt-taatatgttttgaataagaggggaggagagtgtatattttaacataaaaagggaggaaag 1763683  T
Q  269 tgtaattc 276  Q
    ||||||||    
T  1763682 tgtaattc 1763675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 69 - 227
Target Start/End: Original strand, 16067734 - 16067890
Alignment:
Q  69 aagtgtgttaaattattattttttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga--nnnnnnnnat 166  Q
    |||||||||| ||||||  ||||||||| |||||||||||||| ||||||   |||||||||| |||||||||||||||||| |||||          ||    
T  16067734 aagtgtgttagattatt--tttttgctaaattattagaaataaaaaaaaat--tattgagggactaaagtgtagattttaacttaagaggggaggggaat 16067829  T
Q  167 gtaattcaagcttctcttaggggaggagagtgaannnnnnnctaacatgttttgaataaga 227  Q
    ||||||||||||||||| | |||||| |||||||       |||| |||||||||||||||    
T  16067830 gtaattcaagcttctctcaagggaggggagtgaaatattttctaatatgttttgaataaga 16067890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 69 - 156
Target Start/End: Complemental strand, 20030142 - 20030057
Alignment:
Q  69 aagtgtgttaaattattatttttt-gctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    |||||||||| ||||||||||||| | |||||||||||   |||||||||| | |||||| ||| ||||||||||||||||||||||||    
T  20030142 aagtgtgttagattattatttttttgttagattattag---taataaaaaaaattattgaaggattaaagtgtagattttaacataaga 20030057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 13 - 59
Target Start/End: Original strand, 41865439 - 41865485
Alignment:
Q  13 aatatgtattaaattttttattatattaaaatagacccgcaatacta 59  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||    
T  41865439 aatatgtattcaattttttattatattaaaatagacccgcaatacta 41865485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 87 - 152
Target Start/End: Complemental strand, 32221822 - 32221761
Alignment:
Q  87 ttttttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacat 152  Q
    ||||||| ||||||||||||||||| |||||    |||||||||||||||||||||||||||||||    
T  32221822 ttttttggtagattattagaaataaaaaaaa----tattgagggagtaaagtgtagattttaacat 32221761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 87 - 155
Target Start/End: Original strand, 32255579 - 32255646
Alignment:
Q  87 ttttttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataag 155  Q
    ||||||||| ||||||||||||||| ||| || | |||||||||||||||| |||||||||||||||||    
T  32255579 ttttttgcttgattattagaaataaaaaataata-tattgagggagtaaagcgtagattttaacataag 32255646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 69 - 276
Target Start/End: Complemental strand, 49764726 - 49764522
Alignment:
Q  69 aagtgtgttaaattattattttttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataagannnnnnnn--at 166  Q
    |||||||||| ||||||  | ||||||||||||||||||| || |||||    |||||||||| ||||  ||||||||||||||||||          ||    
T  49764726 aagtgtgttagattatt--tgtttgctagattattagaaacaaaaaaaat---tattgagggactaaatagtagattttaacataagaggggaggagaat 49764632  T
Q  167 gtaattcaagcttctcttaggggaggagagtgaannnnnnnctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagaggag 266  Q
    ||||||||||||||||| | |||||| |||||||       |||| |||||||||||||||||| |||  | ||||||||||||| ||| | | ||||      
T  49764631 gtaattcaagcttctctcaagggaggggagtgaaatattttctaatatgttttgaataagaggggagagaagtgtatattttaacataagaggggaggga 49764532  T
Q  267 agtgtaattc 276  Q
    ||||||||||    
T  49764531 agtgtaattc 49764522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 10 - 152
Target Start/End: Complemental strand, 8449399 - 8449252
Alignment:
Q  10 aagaatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnn---aagtgtgttaaattattatt-ttttgctagattattag 105  Q
    ||||||||| ||| ||||||||||||||||||||||||  || |||||||            ||||||| || ||||||||| ||||||||||||||||     
T  8449399 aagaatatgcattcaattttttattatattaaaatagaatcgtaatactattttttttcccgaagtgtgatagattattattattttgctagattattat 8449300  T
Q  106 aaata-ataaaaaagaatattgagggagtaaagtgtagattttaacat 152  Q
    ||||  | |||||| ||||||||  |||||||||||||||||||||||    
T  8449299 aaatttagaaaaaaaaatattgaatgagtaaagtgtagattttaacat 8449252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 11056184 - 11056138
Alignment:
Q  8 cgaagaatatgtattaaattttttattatattaaaatagacccgcaa 54  Q
    |||| |||||||||| |||||||||||||||||||||||||||||||    
T  11056184 cgaaaaatatgtattcaattttttattatattaaaatagacccgcaa 11056138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 87 - 156
Target Start/End: Original strand, 25259794 - 25259861
Alignment:
Q  87 ttttttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    ||||||||||||||||||||||||  |||||| |||||| | ||| ||||||||| ||||||||||||||    
T  25259794 ttttttgctagattattagaaata--aaaaaaaaatattaaaggaataaagtgtaaattttaacataaga 25259861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 165 - 251
Target Start/End: Complemental strand, 11581979 - 11581893
Alignment:
Q  165 atgtaattcaagcttctcttaggggaggagagtgaannnnnnnctaacatgttttgaataagagggaagaagaatgtatattttaac 251  Q
    |||||||||||||||||||||||||||  |||||||       |||| |||||||||||||||||| ||  || |||||||||||||    
T  11581979 atgtaattcaagcttctcttaggggagaggagtgaaaagttttctaatatgttttgaataagaggggaggggagtgtatattttaac 11581893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 95 - 153
Target Start/End: Original strand, 14600891 - 14600947
Alignment:
Q  95 tagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacata 153  Q
    ||||||||||||| ||| ||||||  ||||||||||||||||| |||||||||||||||    
T  14600891 tagattattagaagtaaaaaaaaa--atattgagggagtaaagagtagattttaacata 14600947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 87 - 276
Target Start/End: Original strand, 18365131 - 18365325
Alignment:
Q  87 ttttttgctagat--tattagaaataataaaaaagaa-tattgagggagtaaagtgtagattttaacataagannnnnnnn--atgtaattcaagcttct 181  Q
    |||||||||||||  |||||||||||| | |||| || |||||||||| ||||| |||||||||||| |||||          |||| ||||||||||||    
T  18365131 ttttttgctagatattattagaaataaaataaaaaaagtattgagggactaaagcgtagattttaacttaagaaaggaggggaatgtgattcaagcttct 18365230  T
Q  182 cttaggggaggagagtgaannnnnnnctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagaggagagtgtaattc 276  Q
    || | |||||| | |||||       |||| |||||||||||||||||| ||  || ||||||||||||| ||| | | |||| |||||||||||    
T  18365231 ctcaagggaggggggtgaaatattttctaatatgttttgaataagaggggaggggagtgtatattttaacataagaggggaggggagtgtaattc 18365325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 59
Target Start/End: Original strand, 11388853 - 11388899
Alignment:
Q  13 aatatgtattaaattttttattatattaaaatagacccgcaatacta 59  Q
    |||||| ||| |||||||||||||||||||||| |||||||||||||    
T  11388853 aatatgcattcaattttttattatattaaaataaacccgcaatacta 11388899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 87 - 154
Target Start/End: Original strand, 27255825 - 27255894
Alignment:
Q  87 ttttttgctagattattagaaataataaaaaagaa--tattgagggagtaaagtgtagattttaacataa 154  Q
    |||||||||||||||||| ||| || || ||| ||  |||||||||||||||| ||||||||||||||||    
T  27255825 ttttttgctagattattataaaaaaaaataaaaaaattattgagggagtaaagcgtagattttaacataa 27255894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 87 - 156
Target Start/End: Original strand, 30128118 - 30128188
Alignment:
Q  87 ttttttgctagattattagaaataataaaaaagaa-tattgagggagtaaagtgtagattttaacataaga 156  Q
    |||||| |||||||||||||||||| |||||| || |||  ||||| ||||| ||||||||||||||||||    
T  30128118 tttttttctagattattagaaataaaaaaaaaaaattatcaagggactaaagcgtagattttaacataaga 30128188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 88 - 150
Target Start/End: Complemental strand, 32373951 - 32373890
Alignment:
Q  88 tttttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaac 150  Q
    |||||||||||| ||||||||| | |||||| |||||||||||| ||||| ||||||||||||    
T  32373951 tttttgctagatcattagaaattaaaaaaaa-aatattgagggactaaagagtagattttaac 32373890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 166 - 257
Target Start/End: Complemental strand, 43184797 - 43184706
Alignment:
Q  166 tgtaattcaagcttctcttaggggaggagagtgaannnnnnnctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaa 257  Q
    |||||||||||||||||| | |||||  |||||||       |||| | ||||||||||||||||||| | ||||||||||||||| |||||    
T  43184797 tgtaattcaagcttctctcaagggagatgagtgaaataatctctaatacgttttgaataagagggaaggaaaatgtatattttaacataaaa 43184706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 276
Target Start/End: Complemental strand, 48841658 - 48841547
Alignment:
Q  165 atgtaattcaagcttctcttaggggaggagagtgaannnnnnnctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagagg 264  Q
    ||||||||||||||||||| | | |||| |||||||       |||| |||||||||||||||||| || ||| |||||| |||||| ||| | |||||     
T  48841658 atgtaattcaagcttctctcaagagaggggagtgaaatattttctaatatgttttgaataagaggggaggagagtgtataatttaacataagaggagaga 48841559  T
Q  265 agagtgtaattc 276  Q
     |||||||||||    
T  48841558 ggagtgtaattc 48841547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 69 - 156
Target Start/End: Original strand, 1780566 - 1780652
Alignment:
Q  69 aagtgtgttaaattattat-tttttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    |||||||||| |||||| | ||||||| | ||||||| ||||||  |||||  ||||||| |||||||||| |||||||||||||||||    
T  1780566 aagtgtgttagattattttctttttgccaaattattaaaaataaataaaaa--atattgaaggagtaaagtatagattttaacataaga 1780652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 87 - 156
Target Start/End: Original strand, 5984793 - 5984861
Alignment:
Q  87 ttttttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    |||||||||||| | |||||||||| |||||| | |||||||||| ||||| |||||||||||| |||||    
T  5984793 ttttttgctagagttttagaaataaaaaaaaa-actattgagggactaaagcgtagattttaacttaaga 5984861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 69 - 156
Target Start/End: Complemental strand, 27638711 - 27638629
Alignment:
Q  69 aagtgtgttaaattattattttttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    |||||||||| ||||||  |||||||||||||||||||||||  |||||||  |||| ||||| ||||| |||||||||||| |||||    
T  27638711 aagtgtgttagattatt--tttttgctagattattagaaata--aaaaaag-ttattaagggactaaagcgtagattttaacttaaga 27638629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 251
Target Start/End: Original strand, 10689396 - 10689481
Alignment:
Q  166 tgtaattcaagcttctcttaggggaggagagtgaannnnnnnctaacatgttttgaataagagggaagaagaatgtatattttaac 251  Q
    |||||||||||||||||| | |||||| || || |       |||| |||||||||||||||||| || |||||||||||||||||    
T  10689396 tgtaattcaagcttctctcaagggaggggaatgtaatattttctaatatgttttgaataagaggggaggagaatgtatattttaac 10689481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 208 - 276
Target Start/End: Original strand, 25259914 - 25259982
Alignment:
Q  208 ctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagaggagagtgtaattc 276  Q
    |||| |||||||||||||||||||||| | || ||||||||||| |||||   |||| |||||||||||    
T  25259914 ctaatatgttttgaataagagggaagagggatatatattttaacataaaagaggaggggagtgtaattc 25259982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 72 - 156
Target Start/End: Complemental strand, 41586876 - 41586798
Alignment:
Q  72 tgtgttaaattattattttttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    ||||||| ||||||||||||| ||| ||| |||||||     |||||  |||||||| |||||||||||||||||||||||||||    
T  41586876 tgtgttagattattatttttt-ctaaatttttagaaa-----aaaaaatatattgagtgagtaaagtgtagattttaacataaga 41586798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 87 - 276
Target Start/End: Original strand, 1262913 - 1263103
Alignment:
Q  87 ttttttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataagannnnnnnna--tgtaattcaagcttctctt 184  Q
    |||||||||| |||||||||||| | |||||| | | |||||||| ||||  |||||||||||| |||||        |  |||||||||||||||| |     
T  1262913 ttttttgctatattattagaaattaaaaaaaa-attgttgagggactaaatagtagattttaacttaagaggggagggaaatgtaattcaagcttctttc 1263011  T
Q  185 aggggaggagagtgaannnnnnnctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagaggagagtgtaattc 276  Q
    | |||||  |||||||       |||| |||||||||||||||||| || | | ||||||||||||| ||| | | |||| |||||||||||    
T  1263012 aagggagatgagtgaaatattttctaatatgttttgaataagaggggaggaaagtgtatattttaacataagaggggaggggagtgtaattc 1263103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 113 - 156
Target Start/End: Original strand, 11056542 - 11056585
Alignment:
Q  113 aaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    |||||| |||||||||||||||||||||| |||||||| |||||    
T  11056542 aaaaaaaaatattgagggagtaaagtgtatattttaacttaaga 11056585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 24 - 59
Target Start/End: Original strand, 11397457 - 11397492
Alignment:
Q  24 aattttttattatattaaaatagacccgcaatacta 59  Q
    |||||||||||||||||||||| |||||||||||||    
T  11397457 aattttttattatattaaaataaacccgcaatacta 11397492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 109 - 156
Target Start/End: Original strand, 37183738 - 37183785
Alignment:
Q  109 taataaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    ||||| |||| |||||||||||||||||||||| |||||||| |||||    
T  37183738 taatataaaaaaatattgagggagtaaagtgtatattttaacttaaga 37183785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 156
Target Start/End: Original strand, 10888387 - 10888429
Alignment:
Q  114 aaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    ||||| |||||||||||||||||||||| |||||||| |||||    
T  10888387 aaaaaaaatattgagggagtaaagtgtatattttaacttaaga 10888429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 156
Target Start/End: Original strand, 22130380 - 22130422
Alignment:
Q  114 aaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    ||||| |||||||||||||||||||||| |||||||| |||||    
T  22130380 aaaaaaaatattgagggagtaaagtgtatattttaacttaaga 22130422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 156
Target Start/End: Original strand, 22524784 - 22524826
Alignment:
Q  114 aaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    ||||| |||||||||||||||||||||| |||||||| |||||    
T  22524784 aaaaaaaatattgagggagtaaagtgtatattttaacttaaga 22524826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 156
Target Start/End: Complemental strand, 24542403 - 24542361
Alignment:
Q  114 aaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    ||||| |||||||||||||||||||||| |||||||| |||||    
T  24542403 aaaaaaaatattgagggagtaaagtgtatattttaacttaaga 24542361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 156
Target Start/End: Complemental strand, 27393118 - 27393084
Alignment:
Q  122 tattgagggagtaaagtgtagattttaacataaga 156  Q
    ||||||||||||||||| |||||||||||||||||    
T  27393118 tattgagggagtaaagtatagattttaacataaga 27393084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 111 - 251
Target Start/End: Original strand, 28248032 - 28248174
Alignment:
Q  111 ataaaaaagaatattgagggagtaaagtgtagattttaacataaga--nnnnnnnnatgtaattcaagcttctcttaggggaggagagtgaannnnnnnc 208  Q
    |||||||| | |||||| |||||| |||||||||||||||||||||          || ||||||| ||||||||||| ||||| || ||||            
T  28248032 ataaaaaaaattattgatggagtatagtgtagattttaacataagaggggagaagaatataattcatgcttctcttagaggaggggattgaaatgtttta 28248131  T
Q  209 taacatgttttgaataagagggaagaagaatgtatattttaac 251  Q
    ||| |||||||||| ||||||| |||| |||||||||||||||    
T  28248132 taatatgttttgaacaagaggggagaaaaatgtatattttaac 28248174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 156
Target Start/End: Original strand, 54876792 - 54876849
Alignment:
Q  98 attattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    |||||||||||| | |||||| || ||||||| |||||||||||||||||||| |||||    
T  54876792 attattagaaattaaaaaaaaaaa-attgaggaagtaaagtgtagattttaacctaaga 54876849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 156
Target Start/End: Original strand, 4558719 - 4558764
Alignment:
Q  111 ataaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    |||||||| ||| |||||||||||||||||| |||||||| |||||    
T  4558719 ataaaaaaaaatgttgagggagtaaagtgtatattttaacttaaga 4558764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 156
Target Start/End: Complemental strand, 41865069 - 41865028
Alignment:
Q  115 aaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    |||| |||||||||||||||||||||| |||||||| |||||    
T  41865069 aaaaaaatattgagggagtaaagtgtatattttaacttaaga 41865028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 150
Target Start/End: Complemental strand, 14601518 - 14601482
Alignment:
Q  114 aaaaagaatattgagggagtaaagtgtagattttaac 150  Q
    ||||| |||||||||||||||||||||| ||||||||    
T  14601518 aaaaaaaatattgagggagtaaagtgtatattttaac 14601482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 156
Target Start/End: Complemental strand, 23309023 - 23308987
Alignment:
Q  120 aatattgagggagtaaagtgtagattttaacataaga 156  Q
    |||||||||||||||||||||| |||||||| |||||    
T  23309023 aatattgagggagtaaagtgtatattttaacttaaga 23308987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Complemental strand, 27393383 - 27393347
Alignment:
Q  13 aatatgtattaaattttttattatattaaaatagacc 49  Q
    ||||||||||  |||||||||||||||||||||||||    
T  27393383 aatatgtattcgattttttattatattaaaatagacc 27393347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 90 - 156
Target Start/End: Complemental strand, 47794200 - 47794137
Alignment:
Q  90 tttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    ||||||||||||||||||| || || ||    |||||||||| ||||| ||||||||||||||||||    
T  47794200 tttgctagattattagaaacaaaaataat---tattgagggactaaagcgtagattttaacataaga 47794137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 134; Significance: 9e-70; HSPs: 64)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 13 - 276
Target Start/End: Original strand, 34247843 - 34248107
Alignment:
Q  13 aatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnnaagtgtgttaaattattattttttgctagattattagaaataat 112  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||||||||||||||    
T  34247843 aatatgtattcaattttttattatattaaaatagacccgcaatactatttttttt-aagtgtgttaaattattattttttgctagattattagaaataat 34247941  T
Q  113 aaaaaagaatattgagggagtaaagtgtagattttaacataaga--nnnnnnnnatgtaattcaagcttctcttaggggaggagagtgaannnnnnncta 210  Q
    ||||||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||| |||||||       |||    
T  34247942 aaaaaagaatattgagggagtaaagtgtagattttaacataagaggggagggggatgtaattcaagcttctcttaggggaggggagtgaatttttttcta 34248041  T
Q  211 acatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagaggagagtgtaattc 276  Q
    | |||||||||||||||||| |||  | ||||||||||||||||| | | |||| |||||||||||    
T  34248042 atatgttttgaataagaggggagagaagtgtatattttaacttaagaggggaggggagtgtaattc 34248107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 8 - 275
Target Start/End: Complemental strand, 35899437 - 35899168
Alignment:
Q  8 cgaagaatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnnaagtgtgttaaattattattttttgctagattattagaa 107  Q
    |||| |||||||||| ||| |||||||||||||||||||||| |||||||||         |||||||||||||||||||||||||||||||||||||||    
T  35899437 cgaaaaatatgtattcaatcttttattatattaaaatagacctgcaatactatttttttttaagtgtgttaaattattattttttgctagattattagaa 35899338  T
Q  108 ataataaaaaagaatattgagggagtaaagtgtagattttaacataaga--nnnnnnnnatgtaattcaagcttctcttaggggaggagagtgaannnnn 205  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||| |||||||         
T  35899337 ataataaaaaagaatattgagggagtaaagtgtagattttaacataagaggggagggggatgtaattcaagcttctcttaggggaggggagtgaaaattt 35899238  T
Q  206 nnctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagaggagagtgtaatt 275  Q
      |||| |||||||||||||||||| ||  || ||||||||||||||||| | | |||| ||||||||||    
T  35899237 ttctaatatgttttgaataagaggggaggggagtgtatattttaacttaagaggggaggggagtgtaatt 35899168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 8 - 276
Target Start/End: Original strand, 20894054 - 20894325
Alignment:
Q  8 cgaagaatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnnaagtgtgttaaattattattttttgctagattattagaa 107  Q
    |||| |||||||||| ||||||||||||||||||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||    
T  20894054 cgaaaaatatgtattcaattttttattatattaaaatagacccgcaatactatttttttttaagtgtgttaaattattattttttgctagattattagaa 20894153  T
Q  108 ataataaaaaagaatattgagggagtaaagtgtagattttaacataaga--nnnnnnnnatgtaattcaagcttctcttagggga-ggagagtgaannnn 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||| || | |||||        
T  20894154 ataataaaaaagaatattgagggagtaaagtgtagattttaacataagaggggagggagatgtaattcaagcttctcttaggggagggggggtgaatttt 20894253  T
Q  205 nnnctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagaggagagtgtaattc 276  Q
       |||| |||||||||||||||||| ||  || ||||||||||||||||| | | |||| |||||||||||    
T  20894254 tttctaatatgttttgaataagaggggaggggagtgtatattttaacttaagaggggaggggagtgtaattc 20894325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 13 - 276
Target Start/End: Original strand, 552288 - 552552
Alignment:
Q  13 aatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnnaagtgtgttaaattattattttttgctagattattagaaataat 112  Q
    |||||||||| ||||||||||||||||||||||||||| ||||||||         ||||||||||||||||||||||||||||||||||||||||||||    
T  552288 aatatgtatttaattttttattatattaaaatagacccacaatactatttttttt-aagtgtgttaaattattattttttgctagattattagaaataat 552386  T
Q  113 aaaaaagaatattgagggagtaaagtgtagattttaacataaga--nnnnnnnnatgtaattcaagcttctcttaggggaggagagtgaannnnnnncta 210  Q
    ||||||||||||||||||||||||||||||||||||||||||||          ||||||||||| ||||||||||||||||||||||||       |||    
T  552387 aaaaaagaatattgagggagtaaagtgtagattttaacataagaggggagggggatgtaattcaaacttctcttaggggaggagagtgaatttttttcta 552486  T
Q  211 acatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagaggagagtgtaattc 276  Q
    | |||||||||||||||||| ||  || |||||||||||||||||   | |||| |||||||||||    
T  552487 atatgttttgaataagaggggaggggagtgtatattttaacttaaggggggaggggagtgtaattc 552552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 8 - 275
Target Start/End: Complemental strand, 38972763 - 38972494
Alignment:
Q  8 cgaagaatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnnaagtgtgttaaattattattttttgctagattattagaa 107  Q
    |||| |||||||||| ||| |||||||||||||||||||||  |||||||||         |||||||||||||||||||||||||||||||||||||||    
T  38972763 cgaaaaatatgtattcaatcttttattatattaaaatagacatgcaatactatttttttttaagtgtgttaaattattattttttgctagattattagaa 38972664  T
Q  108 ataataaaaaagaatattgagggagtaaagtgtagattttaacataaga--nnnnnnnnatgtaattcaagcttctcttaggggaggagagtgaannnnn 205  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||          |||||||||||| ||||||||||||||| |||||||         
T  38972663 ataataaaaaagaatattgagggagtaaagtgtagattttaacataagaggggagggggatgtaattcaagtttctcttaggggaggggagtgaaatttt 38972564  T
Q  206 nnctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagaggagagtgtaatt 275  Q
      |||| |||||||||||||||||| ||  || ||||||||||||||||  | | |||| ||||||||||    
T  38972563 ttctaatatgttttgaataagaggggaggggagtgtatattttaacttaggaggggaggggagtgtaatt 38972494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 13 - 276
Target Start/End: Original strand, 16110945 - 16111211
Alignment:
Q  13 aatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnnaagtgtgttaaattattatttt-ttgctagattattagaaataa 111  Q
    |||||||||| |||||||||||||||||||||||| |||||||||||         |||||||||||||||||||||| ||||||||||| |||||||||    
T  16110945 aatatgtattcaattttttattatattaaaatagatccgcaatactatttttttttaagtgtgttaaattattatttttttgctagattagtagaaataa 16111044  T
Q  112 taaaaaagaatattgagggagtaaagtgtagattttaacataaga--nnnnnnnnatgtaattcaagcttctcttaggggaggagagtg-aannnnnnnc 208  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||          |||||||||||||||||||||||||||| ||||| ||       |    
T  16111045 taaaaaagaatattgagggggtaaaatgtagattttaacataagaggggaggggaatgtaattcaagcttctcttaggggaggggagtgaaatttttttc 16111144  T
Q  209 taacatgttttgaataagaggga-agaagaatgtatattttaacttaaaaagagaggagagtgtaattc 276  Q
    ||||||||||||||||||||||| |||||  ||||||||||||||||| |   |||| |||||||||||    
T  16111145 taacatgttttgaataagagggagagaag--tgtatattttaacttaagagtggaggggagtgtaattc 16111211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 13 - 255
Target Start/End: Complemental strand, 43657204 - 43656958
Alignment:
Q  13 aatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnnaagtgtgttaaattattattttttgctagattattagaaataat 112  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||         ||||||||||||||||||||||| ||||||||||||||||||||    
T  43657204 aatatgtattcaattttttattatattaaaatagacccgcaatactatttttttttaagtgtgttaaattattattttt-gctagattattagaaataat 43657106  T
Q  113 aaaaaagaatattgagggagtaaagtgtag---attttaacataaga--nnnnnnnnatgtaattcaagcttctcttaggggaggagagtgaannnnnnn 207  Q
    ||||||||||||||| ||||||||||||||   |||| |||||||||          |||||||||||||||||||||||||| |  ||||||           
T  43657105 aaaaaagaatattgatggagtaaagtgtagataatttgaacataagaggggagggggatgtaattcaagcttctcttaggggatggaagtgaaatttttt 43657006  T
Q  208 ctaacatgttttgaataagagggaagaagaatgtatattttaacttaa 255  Q
    |||| |||||||||||||| ||| || ||| |||||||||||||||||    
T  43657005 ctaatatgttttgaataagtggggaggagagtgtatattttaacttaa 43656958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 15 - 251
Target Start/End: Complemental strand, 43439418 - 43439183
Alignment:
Q  15 tatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnnaagtgtgttaaattattatt-ttttgctagattattagaaataata 113  Q
    |||||||| ||||||||||||||||||||||||||||||||||||         |||||||||| ||||||||| |||| |||||||||||||||||| |    
T  43439418 tatgtattcaattttttattatattaaaatagacccgcaatactatttttttttaagtgtgttagattattattatttttctagattattagaaataaaa 43439319  T
Q  114 aaaaagaatattgagggagtaaagtgtagattttaacataa-gannnnnnnnatgtaattcaagcttctcttaggggaggagagtgaannnnnnnctaac 212  Q
    |  ||  |||||||||||||||||||||||||||||||||| |         |||||||||||||||||||||||||||| | |||||       ||||     
T  43439318 agtaa--atattgagggagtaaagtgtagattttaacataagggggaggagaatgtaattcaagcttctcttaggggaggggtgtgaa-aaaaatctaat 43439222  T
Q  213 atgttttgaataagagggaagaagaatgtatattttaac 251  Q
    |||||||||||||||||| |  ||| |||||||||||||    
T  43439221 atgttttgaataagaggggacgagagtgtatattttaac 43439183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 8 - 251
Target Start/End: Complemental strand, 4437608 - 4437366
Alignment:
Q  8 cgaagaatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnn-aagtgtgttaaattattatt--ttttgctagattatta 104  Q
    |||| |||||||||| |||||||||||||||||||||||||||||||||| |          |||||||||| |||||||||  |||||||| |||||||    
T  4437608 cgaaaaatatgtattcaattttttattatattaaaatagacccgcaatacaatttttttacgaagtgtgttagattattattatttttgctaaattatta 4437509  T
Q  105 gaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga--nnnnnnnnatgtaattcaagcttctcttaggggaggagagtgaann 202  Q
    ||||||| ||||||     |||||||||||||||||||||||||||||||||          |||||||||||||||||||||| ||||| | ||| |      
T  4437508 gaaataaaaaaaaa-----ttgagggagtaaagtgtagattttaacataagagggggtgagaatgtaattcaagcttctcttagaggagg-gggtgtaaa 4437415  T
Q  203 nnnnnctaacatgttttgaataagagggaagaagaatgtatattttaac 251  Q
         |||| |||||||||||||||||||||  || |||||||||||||    
T  4437414 gttttctaatatgttttgaataagagggaaggggattgtatattttaac 4437366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 16 - 251
Target Start/End: Complemental strand, 11051850 - 11051613
Alignment:
Q  16 atgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnn-aagtgtgttaaattattatt-ttttgctagattattagaaataata 113  Q
    ||||||| |||||||||||||||||||||||||| |||||||||          |||||||||| | ||||||| |||| |||||||||||||||||| |    
T  11051850 atgtattcaattttttattatattaaaatagacctgcaatactattttttttcgaagtgtgttagactattattatttttctagattattagaaataaaa 11051751  T
Q  114 aaaaagaatattgagggagtaaagtgtagattttaacataa--gannnnnnnnatgtaattcaagcttctcttaggggaggagagtgaannnnnnnctaa 211  Q
    |  ||  ||||||||||||||||||||||||||||||||||  |         || ||||||||||||||||||||||||| |||||||       ||||    
T  11051750 agtaa--atattgagggagtaaagtgtagattttaacataaggggggaggggaatataattcaagcttctcttaggggaggggagtgaaaaaattactaa 11051653  T
Q  212 catgttttgaataagagggaagaagaatgtatattttaac 251  Q
     |||||||||||||||||| ||  || |||||||||||||    
T  11051652 tatgttttgaataagaggggaggggagtgtatattttaac 11051613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 8 - 156
Target Start/End: Original strand, 6077819 - 6077963
Alignment:
Q  8 cgaagaatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnnaagtgtgttaaattattatttttt-gctagattattaga 106  Q
    |||| |||||||||| || |||| ||||||||||||||||||||||||||||         |||||||||| ||||| ||||||| ||||||||||||||    
T  6077819 cgaaaaatatgtattcaaattttgattatattaaaatagacccgcaatactatttttttcgaagtgtgttagattatcatttttttgctagattattaga 6077918  T
Q  107 aataataaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    ||||| ||||||     ||||||||||||| |||||||||||||||||||    
T  6077919 aataaaaaaaaa-----ttgagggagtaaaatgtagattttaacataaga 6077963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 13 - 272
Target Start/End: Original strand, 41077943 - 41078199
Alignment:
Q  13 aatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnnaagtgtgttaaattatta-ttttttgctagattattagaaataa 111  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||         |||||||||| ||| ||| ||||||||||||||||| |||||      
T  41077943 aatatgtattaaattttttattatattaaaataaacccgcaatacta-ttttttcgaagtgtgttagatttttatttttttgctagattatttgaaat-- 41078039  T
Q  112 taaaaaagaatattgagggagtaaagtgtagattttaacataaga--nnnnnnnnatgtaattcaagcttctcttaggggaggagagtgaannnnnnnct 209  Q
       |||| |||||| |||||||||||| |||||| ||| ||||||          ||||||||||||||||||||||||||||||| ||||       ||    
T  41078040 ---aaaaaaatattaagggagtaaagtatagattctaatataagaggggagagggatgtaattcaagcttctcttaggggaggagaatgaaaagttttct 41078136  T
Q  210 aacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagaggagagtgta 272  Q
    |  |||||||||||||||||| ||  || ||||||||||||| ||| |   ||||||||||||    
T  41078137 attatgttttgaataagaggggaggggagtgtatattttaacataagagaggaggagagtgta 41078199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 69 - 276
Target Start/End: Complemental strand, 34173280 - 34173075
Alignment:
Q  69 aagtgtgttaaattattattttttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga-nnnnnnnnatg 167  Q
    |||||||||| ||||||  | |||||||||||||||||||||| |||||| |||||||||||| ||||  ||||||||||||||||||         |||    
T  34173280 aagtgtgttagattatt--tgtttgctagattattagaaataaaaaaaaa-aatattgagggactaaaacgtagattttaacataagagggaaaagaatg 34173184  T
Q  168 taattcaagcttctcttaggggaggagagtgaannnnnnnctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagaggaga 267  Q
    |||||||||||||||| | |||||| |||||||       |||| |||||||||||||||||| ||  || ||||||||||||| ||| | | ||||  |    
T  34173183 taattcaagcttctctcaagggaggggagtgaaatattttctaatatgttttgaataagaggggaggggagtgtatattttaacataagaggggagggta 34173084  T
Q  268 gtgtaattc 276  Q
    |||||||||    
T  34173083 gtgtaattc 34173075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 13 - 276
Target Start/End: Complemental strand, 17829343 - 17829080
Alignment:
Q  13 aatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnnaagtgtgttaaattattatt-ttttgctagattattagaaataa 111  Q
    |||||||||| ||||||||||| ||||||||||||| || |||||||         |||||||||| ||||||||| |||| |||||||||| |||||||    
T  17829343 aatatgtatttaattttttattctattaaaatagactcgtaatactattttttcg-aagtgtgttagattattattatttttctagattatttgaaataa 17829245  T
Q  112 taaaaaagaatattgagggagtaaagtgtagattttaacataa--gannnnnnnnatgtaattcaagcttctcttaggggaggagagtgaannnnnnnct 209  Q
     ||| ||  |||||||  |||||||||||||||||||||||||  |         |||||||||||||||||||||||  ||| |||||||       ||    
T  17829244 aaaataa--atattgaaagagtaaagtgtagattttaacataaggggggaggggaatgtaattcaagcttctcttaggaaaggggagtgaaaagttttct 17829147  T
Q  210 aacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagaggagagtgtaattc 276  Q
    || |||||||||||||||||| ||  || ||||||||||||| ||| | | |||  |||||||||||    
T  17829146 aatatgttttgaataagaggggaggggagtgtatattttaacataagaggggagtggagtgtaattc 17829080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 13 - 156
Target Start/End: Original strand, 28167994 - 28168137
Alignment:
Q  13 aatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnnaagtgt-----gttaaattatta-ttttttgctagattattaga 106  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||         ||||||     |||| ||||||| |||||||||||||||||||     
T  28167994 aatatgtattcaattttttattatattaaaatagacccgcaatactatttttttcgaagtgtgttaggttagattattatttttttgctagattattag- 28168092  T
Q  107 aataataaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
      ||||||||   ||||||||||||||||||||||||||||| |||||||    
T  28168093 --taataaaa---aatattgagggagtaaagtgtagattttatcataaga 28168137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 8 - 276
Target Start/End: Complemental strand, 5113901 - 5113632
Alignment:
Q  8 cgaagaatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnn--aagtgtgttaaattatta--ttttttgctagattatt 103  Q
    |||| |||||||||| || |||| |||||||||||||||||||||| |||||           |||||||||| ||||||   |||||||||||||||||    
T  5113901 cgaaaaatatgtattcaaattttgattatattaaaatagacccgcattactatttttttttcgaagtgtgttagattatttatttttttgctagattatt 5113802  T
Q  104 agaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga--nnnnnnnnatgtaattcaagcttctcttaggggaggagagtgaan 201  Q
    | |||||| |||||    |||||||||||||||||||||||||||||||||||          || |||||||||||| ||||||| |||  |||||||     
T  5113801 aaaaataaaaaaaa----tattgagggagtaaagtgtagattttaacataagaatggaggagaatataattcaagcttttcttaggagagaggagtgaaa 5113706  T
Q  202 nnnnnnctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagaggagagtgtaattc 276  Q
          |||| ||||||| |||||||||||||| || |||||| |||||| | || || |||| |||||||||||    
T  5113705 tgttttctaatatgttttaaataagagggaagatgagtgtataatttaacat-aagagggaggtgagtgtaattc 5113632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 8 - 192
Target Start/End: Complemental strand, 42791778 - 42791595
Alignment:
Q  8 cgaagaatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnn-aagtgtgttaaattattatt--ttttgctagattatta 104  Q
    |||| |||||||||| |||||||||||||||||||||||||||| ||||| |          ||||||||||| ||||||||  |||||||| |||||||    
T  42791778 cgaaaaatatgtattcaattttttattatattaaaatagacccgtaatacaatttttttccgaagtgtgttaa-ttattattatttttgctaaattatta 42791680  T
Q  105 gaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga--nnnnnnnnatgtaattcaagcttctcttaggggagg 192  Q
    ||||||| ||||||     |||||||||||||||||||||||||| ||||||          ||||||||||||||||||||||||||||    
T  42791679 gaaataaaaaaaaa-----ttgagggagtaaagtgtagattttaatataagaggggaggggaatgtaattcaagcttctcttaggggagg 42791595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 8 - 251
Target Start/End: Original strand, 20125940 - 20126181
Alignment:
Q  8 cgaagaatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnnaagtgtgttaaattattattttttgctagattattagaa 107  Q
    |||| |||||||||| || |||| ||||||||||||||||| || ||| |||         |||||||||| ||| || ||||||| |||||||||||||    
T  20125940 cgaaaaatatgtattcaaattttgattatattaaaatagactcgtaatcctattttttccaaagtgtgttagattttttttttttgttagattattagaa 20126039  T
Q  108 ataataaaaaagaatattgagggagtaaagtgtagattttaacataaga--nnnnnnnnatgtaattcaagcttctcttaggggaggagagtgaannnnn 205  Q
    |||| ||||| |    |||| ||| | ||||||||||||||||||||||          |||||||||||| |||||||||||||||||| ||||         
T  20126040 ataaaaaaaatg----ttgaaggattgaagtgtagattttaacataagaggggaggggaatgtaattcaagtttctcttaggggaggagaatgaaatatt 20126135  T
Q  206 nnctaacatgttttgaataagagggaagaagaatgtatattttaac 251  Q
      |||| || ||||||||||||| |||||  | |||||||||||||    
T  20126136 ttctaatatattttgaataagagagaagagaagtgtatattttaac 20126181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 72 - 156
Target Start/End: Original strand, 31709575 - 31709659
Alignment:
Q  72 tgtgttaaattattatttttt--gctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    ||||||| |||||||||||||  |||||||||||| |||||| | |||| |||||||||||||||||||||||||||||||||||||    
T  31709575 tgtgttagattattattttttctgctagattatta-aaataaaataaaa-aatattgagggagtaaagtgtagattttaacataaga 31709659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 87 - 251
Target Start/End: Original strand, 33146557 - 33146722
Alignment:
Q  87 ttttttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga--nnnnnnnnatgtaattcaagcttctctt 184  Q
    |||||| |||||||||||||||||| |||||| | |||||||||| ||||| |||||||||||| |||||          |||||||||||||||||||     
T  33146557 tttttttctagattattagaaataa-aaaaaaaattattgagggactaaagcgtagattttaacttaagaggggaggggaatgtaattcaagcttctctc 33146655  T
Q  185 aggggaggagagtgaannnnnnnctaacatgttttgaataagagggaagaagaatgtatattttaac 251  Q
    | |||||| |||||||       |||| |||||||||||||||||| ||  || |||||||||||||    
T  33146656 aagggaggggagtgaaatattttctaatatgttttgaataagaggggaggggagtgtatattttaac 33146722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 87 - 154
Target Start/End: Complemental strand, 16599742 - 16599677
Alignment:
Q  87 ttttttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataa 154  Q
    |||||||||||||||||||| |||| ||||||   |||||||||||||||||||||||||||||||||    
T  16599742 ttttttgctagattattagagataaaaaaaaat--tattgagggagtaaagtgtagattttaacataa 16599677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 8 - 149
Target Start/End: Original strand, 32023561 - 32023698
Alignment:
Q  8 cgaagaatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnnaagtgtgttaaattattatt--ttttgctagattattag 105  Q
    |||| |||||||||| ||||| ||||||| ||||||||||| |  |||||||         |||||||||| |||||| ||  |||||||||||||||||    
T  32023561 cgaaaaatatgtattcaatttcttattattttaaaatagactcataatactattttttt--aagtgtgttagattattgttatttttgctagattattag 32023658  T
Q  106 aaataataaaaaagaatattgagggagtaaagtgtagattttaa 149  Q
    |||||| |||||    ||||||||||||||||||||||||||||    
T  32023659 aaataaaaaaaa----tattgagggagtaaagtgtagattttaa 32023698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 13 - 59
Target Start/End: Original strand, 11942465 - 11942511
Alignment:
Q  13 aatatgtattaaattttttattatattaaaatagacccgcaatacta 59  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||    
T  11942465 aatatgtattcaattttttattatattaaaatagacccgcaatacta 11942511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 13 - 156
Target Start/End: Complemental strand, 33886586 - 33886445
Alignment:
Q  13 aatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnnaagtgtgttaaattattattttttgctagattattagaaataat 112  Q
    |||||||||| || |||| ||| ||||||||||||||| ||||||||         |||||||||| ||| ||  |||||  |||||||||||||||||     
T  33886586 aatatgtattcaaattttgattgtattaaaatagacccacaatactatttttttcgaagtgtgttagattttttattttttttagattattagaaataaa 33886487  T
Q  113 aaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    ||||||   |||||| | | ||||||||||||||||||||||||    
T  33886486 aaaaaat--tattgaagaattaaagtgtagattttaacataaga 33886445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 87 - 156
Target Start/End: Complemental strand, 64531 - 64465
Alignment:
Q  87 ttttttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    ||||||||| ||||||||||||||| ||||||   |||||||||||||||  ||||||||||||||||||    
T  64531 ttttttgcttgattattagaaataaaaaaaaa---tattgagggagtaaatcgtagattttaacataaga 64465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 87 - 156
Target Start/End: Complemental strand, 35657555 - 35657487
Alignment:
Q  87 ttttttgctagatta-ttagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    ||||||||||||| | |||||||||| ||||||   |||||||||||||||||||||||||||||||||||    
T  35657555 ttttttgctagatcaattagaaataaaaaaaaat--tattgagggagtaaagtgtagattttaacataaga 35657487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 89 - 251
Target Start/End: Original strand, 40020614 - 40020774
Alignment:
Q  89 ttttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacata--agannnnnnnnatgtaattcaagcttctcttag 186  Q
    ||||||||||||||||||||||| ||||| |    |||||||||||||| |||||||||||||||  |||        ||||||||||||||||||| |     
T  40020614 ttttgctagattattagaaataaaaaaaatg----ttgagggagtaaagcgtagattttaacataagagaggaagggaatgtaattcaagcttctctcaa 40020709  T
Q  187 gggaggagagtgaannnnnnnctaacatgttttgaataagagggaagaagaatgtatattttaac 251  Q
    |||||| |||||||       |||| |||||||||| ||||||| ||   | |||||||||||||    
T  40020710 gggaggggagtgaaatattttctaatatgttttgaaaaagaggggagtgaagtgtatattttaac 40020774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 13 - 59
Target Start/End: Complemental strand, 8726913 - 8726867
Alignment:
Q  13 aatatgtattaaattttttattatattaaaatagacccgcaatacta 59  Q
    |||||||||| || |||||||||||||||||||||||||||||||||    
T  8726913 aatatgtatttaaatttttattatattaaaatagacccgcaatacta 8726867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 13 - 156
Target Start/End: Original strand, 10356913 - 10357052
Alignment:
Q  13 aatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnnaagtgtgttaaattattattttttgctagattattagaaataat 112  Q
    |||||||||| || |||| || ||| ||||||||| |||||||||||         |||||||||  ||| || ||||||||||||||||||||   |||    
T  10356913 aatatgtattcaaattttgataataataaaatagaaccgcaatactatttttctcgaagtgtgtttgattttt-ttttttgctagattattaga---aat 10357008  T
Q  113 aaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    |||||| | ||||| |||||||||||||||||||| || |||||    
T  10357009 aaaaaaaattattgtgggagtaaagtgtagattttgacttaaga 10357052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 69 - 276
Target Start/End: Complemental strand, 3045165 - 3044957
Alignment:
Q  69 aagtgtgttaaattattattttttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataagannnnnnnn--at 166  Q
    |||||||||| |||||   ||||||||||||| ||| |||||| |||||| | || ||||||| ||||| |||||||||||| |||||          ||    
T  3045165 aagtgtgttagattatgtatttttgctagatt-ttaaaaataaaaaaaaaaattagtgagggactaaagcgtagattttaacttaagagatgaggggaat 3045067  T
Q  167 gtaattcaagcttctcttaggggaggagagtgaannnnnnnctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagaggag 266  Q
    ||||||||||||||||| | ||||||  | || |       |||| ||||||||||||||| |||||  || ||||||||||||| ||| | | ||||||    
T  3045066 gtaattcaagcttctctcaagggagggtaatgtaatattttctaatatgttttgaataagatggaaggggagtgtatattttaacataagaggtgaggag 3044967  T
Q  267 agtgtaattc 276  Q
    ||||||||||    
T  3044966 agtgtaattc 3044957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 72 - 152
Target Start/End: Complemental strand, 3515038 - 3514959
Alignment:
Q  72 tgtgttaaattattatttttt--gctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacat 152  Q
    ||||||| |||||||||||||  ||||||||||||||||||| |||||    |||||||| ||| ||||||||||||||||||    
T  3515038 tgtgttagattattattttttttgctagattattagaaataaaaaaaat---tattgaggaagtgaagtgtagattttaacat 3514959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 69 - 275
Target Start/End: Complemental strand, 11796377 - 11796170
Alignment:
Q  69 aagtgtgttaaattattattttttg--ctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga--nnnnnnnn 164  Q
    |||||||||| |||||||||||||   ||| |||||||||||||| |||||    |||||||||| ||||| |||||||||||| |||||              
T  11796377 aagtgtgttagattattattttttttactaaattattagaaataaaaaaaat---tattgagggactaaagcgtagattttaacttaagaggggagggaa 11796281  T
Q  165 atgtaattcaagcttctcttaggggaggagagtgaannnnnnnctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagagg 264  Q
    ||||||||||||||||| | | |||||| |||||||       |||| |||||||||||||||||| ||  || |||| |||||||| ||| | | ||||    
T  11796280 atgtaattcaagcttctatcaagggaggggagtgaaatattttctaatatgttttgaataagaggggaggggagtgtacattttaacataagaggggagg 11796181  T
Q  265 agagtgtaatt 275  Q
     ||||||||||    
T  11796180 ggagtgtaatt 11796170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 86 - 156
Target Start/End: Complemental strand, 13873538 - 13873466
Alignment:
Q  86 attttttgctagat--tattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    ||||||||||||||  |||||||||||| |||||| | |||||||||| ||||| |||||||||||| |||||    
T  13873538 attttttgctagatattattagaaataaaaaaaaaaagtattgagggactaaagcgtagattttaacttaaga 13873466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 86 - 156
Target Start/End: Complemental strand, 14013663 - 14013591
Alignment:
Q  86 attttttgctagat--tattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    ||||||||||||||  |||||||||||| |||||| | |||||||||| ||||| |||||||||||| |||||    
T  14013663 attttttgctagatattattagaaataaaaaaaaaaagtattgagggactaaagcgtagattttaacttaaga 14013591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 91 - 197
Target Start/End: Original strand, 26196739 - 26196842
Alignment:
Q  91 ttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataagannnnnnnna-tgtaattcaagcttctcttagggg 189  Q
    |||||||||||||| ||||||   |||||  |||||||||||||||||||||||||| |||| |||        | ||||||||||||||||||||||||    
T  26196739 ttgctagattattataaataa---aaaagt-tattgagggagtaaagtgtagattttgacattagagggatgagaatgtaattcaagcttctcttagggg 26196834  T
Q  190 aggagagt 197  Q
    ||||||||    
T  26196835 aggagagt 26196842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 69 - 148
Target Start/End: Original strand, 32875656 - 32875731
Alignment:
Q  69 aagtgtgttaaattattattttttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagatttta 148  Q
    |||||||||| ||| || ||||||||||||||||||||   ||||||||| |||||| ||| ||||||||||||||||||    
T  32875656 aagtgtgttagattttt-ttttttgctagattattaga---aataaaaaaaaatattcaggaagtaaagtgtagatttta 32875731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 111 - 156
Target Start/End: Complemental strand, 34247476 - 34247431
Alignment:
Q  111 ataaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||    
T  34247476 ataaaaaaaaatattgagggagtaaagtgtagattttaacttaaga 34247431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 276
Target Start/End: Original strand, 37330143 - 37330419
Alignment:
Q  7 tcgaagaatatgtattaaattttttattatattaaaatagacccgcaatacta---------nnnnnnnnnaagtgtgttaa---attattattttttgc 94  Q
    ||||| |||||||||| ||||||||||||| ||||||||||||| ||||||||                  || ||||||||   |||||||||||||||    
T  37330143 tcgaaaaatatgtattcaattttttattattttaaaatagaccctcaatactattttttttcttctttccaaattgtgttaaattattattattttttgc 37330242  T
Q  95 tagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga--nnnnnnnnatgtaattcaagcttctcttaggggag- 191  Q
    ||||||||||||||||| |||       ||||||| ||||||||||||| ||||||||||||          ||||||||||||||||||||||| |||     
T  37330243 tagattattagaaataaaaaa-------attgaggcagtaaagtgtaga-tttaacataagaggggagggaaatgtaattcaagcttctcttaggagaga 37330334  T
Q  192 gagagtgaannnnnnnctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagaggagagtgtaattc 276  Q
    | | |||||       |||| |||||||||||||||||| |  ||| ||||||||||||| ||| | |||| |||||||||||||    
T  37330335 gggggtgaaaagttttctaatatgttttgaataagaggggatgagagtgtatattttaacataagaggagaagagagtgtaattc 37330419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 208 - 276
Target Start/End: Original strand, 7939970 - 7940038
Alignment:
Q  208 ctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagaggagagtgtaattc 276  Q
    |||| |||||||||||||||||| ||  || ||||||||||||| ||||| | ||||||||||||||||    
T  7939970 ctaatatgttttgaataagaggggaggggagtgtatattttaacataaaaggggaggagagtgtaattc 7940038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 165 - 200
Target Start/End: Complemental strand, 44332220 - 44332185
Alignment:
Q  165 atgtaattcaagcttctcttaggggaggagagtgaa 200  Q
    ||||||||||||||||||||||||||||||||||||    
T  44332220 atgtaattcaagcttctcttaggggaggagagtgaa 44332185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 69 - 156
Target Start/End: Complemental strand, 18468010 - 18467928
Alignment:
Q  69 aagtgtgttaaattattattttttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    |||||||||| ||||||  ||||||||||||||| |||||||| |||||    |||||||||| ||||| |||||||||||| |||||    
T  18468010 aagtgtgttagattatt--tttttgctagattatgagaaataaaaaaaat---tattgagggactaaagcgtagattttaacttaaga 18467928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 59
Target Start/End: Original strand, 41521450 - 41521496
Alignment:
Q  13 aatatgtattaaattttttattatattaaaatagacccgcaatacta 59  Q
    |||||||||| || |||| ||||||||||||||||||||||||||||    
T  41521450 aatatgtattcaaattttgattatattaaaatagacccgcaatacta 41521496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 165 - 251
Target Start/End: Complemental strand, 15006570 - 15006484
Alignment:
Q  165 atgtaattcaagcttctcttaggggaggagagtgaannnnnnnctaacatgttttgaataagagggaagaagaatgtatattttaac 251  Q
    |||||||| |||||||||| | ||||||||||||||       |||| |||||||||||||||||| ||  || |||||||||||||    
T  15006570 atgtaattgaagcttctctcaagggaggagagtgaaatattttctaatatgttttgaataagaggggaggggagtgtatattttaac 15006484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 87 - 156
Target Start/End: Original strand, 39160239 - 39160307
Alignment:
Q  87 ttttttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    ||||||||||| ||||||||||| | |||||| | |||||||||| ||||| |||||||||||| |||||    
T  39160239 ttttttgctagtttattagaaatgaaaaaaaa-attattgagggactaaagcgtagattttaacttaaga 39160307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 87 - 156
Target Start/End: Complemental strand, 39208955 - 39208887
Alignment:
Q  87 ttttttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    ||||||||||| ||||||||||| | |||||| | |||||||||| ||||| |||||||||||| |||||    
T  39208955 ttttttgctagtttattagaaatgaaaaaaaa-attattgagggactaaagcgtagattttaacttaaga 39208887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 230
Target Start/End: Original strand, 32023722 - 32023787
Alignment:
Q  165 atgtaattcaagcttctcttaggggaggagagtgaannnnnnnctaacatgttttgaataagaggg 230  Q
    |||||||||||||||||||||||||||| |||| ||       |||| ||||||||||||||||||    
T  32023722 atgtaattcaagcttctcttaggggaggggagtaaaaagttttctaatatgttttgaataagaggg 32023787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 268
Target Start/End: Original strand, 41521556 - 41521704
Alignment:
Q  122 tattgagggagtaaagtgtagattttaacataaga--nnnnnnnnatgtaattcaagcttctcttaggggaggagagtgaannnnnnnctaacatgtttt 219  Q
    |||||||| ||||||||||||||||||||||||||          ||||||||||||||||||||||| |||| | |||||        ||| |||||||    
T  41521556 tattgaggaagtaaagtgtagattttaacataagagggggagggaatgtaattcaagcttctcttaggagaggggtgtgaaaagttttttaatatgtttt 41521655  T
Q  220 gaataagagggaagaagaatgtatattttaacttaaaaagagaggagag 268  Q
     |||||||||| ||  || ||||||||||||| ||| | | ||||||||    
T  41521656 aaataagaggggaggggagtgtatattttaacataagaggggaggagag 41521704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 113 - 156
Target Start/End: Complemental strand, 551917 - 551874
Alignment:
Q  113 aaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    |||||| |||||||||||||||||||||| |||||||| |||||    
T  551917 aaaaaataatattgagggagtaaagtgtatattttaacttaaga 551874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 83 - 154
Target Start/End: Original strand, 31597670 - 31597736
Alignment:
Q  83 attattttttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataa 154  Q
    ||||||||||| ||||||||||||||||| | ||||     |||||||| ||||| ||||||||||||||||    
T  31597670 attattttttgttagattattagaaataaaataaaa-----ttgagggactaaagcgtagattttaacataa 31597736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 113 - 156
Target Start/End: Original strand, 43657575 - 43657618
Alignment:
Q  113 aaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    |||||| |||||||||||||||||||||| |||||||| |||||    
T  43657575 aaaaaaaaatattgagggagtaaagtgtatattttaacttaaga 43657618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 156
Target Start/End: Original strand, 5790908 - 5790942
Alignment:
Q  122 tattgagggagtaaagtgtagattttaacataaga 156  Q
    |||||||||| ||||||||||||||||||||||||    
T  5790908 tattgagggactaaagtgtagattttaacataaga 5790942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 87 - 153
Target Start/End: Original strand, 14736671 - 14736735
Alignment:
Q  87 ttttttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacata 153  Q
    |||||||||||||||||||||||  |||||||   |||||| |||||||| ||||||||||||||||    
T  14736671 ttttttgctagattattagaaattttaaaaaa-tttattga-ggagtaaaatgtagattttaacata 14736735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 82 - 156
Target Start/End: Complemental strand, 22606540 - 22606467
Alignment:
Q  82 tattattttttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    |||||||||||| ||| |||||||||||   |||||| ||| | |||||| ||||| ||||||||||||||||||    
T  22606540 tattattttttgttaggttattagaaatttaaaaaaaaaatct-gagggactaaagcgtagattttaacataaga 22606467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 156
Target Start/End: Original strand, 35899802 - 35899844
Alignment:
Q  114 aaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    ||||| |||||||||||||||||||||| |||||||| |||||    
T  35899802 aaaaaaaatattgagggagtaaagtgtatattttaacttaaga 35899844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 87 - 154
Target Start/End: Complemental strand, 37009211 - 37009148
Alignment:
Q  87 ttttttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataa 154  Q
    ||||||| |||||| |||||||||| ||||||    ||||||||| ||||| ||||||||||||||||    
T  37009211 ttttttgttagatttttagaaataaaaaaaaa----attgagggattaaagcgtagattttaacataa 37009148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 69 - 251
Target Start/End: Complemental strand, 37199165 - 37198978
Alignment:
Q  69 aagtgtgttaaattattattttttgctagattattagaaataataaaaaagaa-----tattgagggagtaaagtgtagattttaacataagannnnnnn 163  Q
    |||||||||| |||||||||||   |||||||||||||||||| |||||| ||     |||||||| | ||| | |||||||||||| |||||           
T  37199165 aagtgtgttagattattatttta--ctagattattagaaataaaaaaaaaaaaaaaactattgaggaactaacgcgtagattttaacttaagaggggagg 37199068  T
Q  164 n--atgtaattcaagcttctcttaggggaggagagtgaannnnnnnctaacatgttttgaataagagggaagaagaatgtatattttaac 251  Q
       |||||||| |||||||||| | |||||| |||||||       |||| |||||||||||||||||| ||  || |||||||||||||    
T  37199067 ggaatgtaatttaagcttctctcaagggaggggagtgaaatattttctaatatgttttgaataagaggggaggggagtgtatattttaac 37198978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 156
Target Start/End: Original strand, 38973128 - 38973170
Alignment:
Q  114 aaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    ||||| |||||||||||||||||||||| |||||||| |||||    
T  38973128 aaaaaaaatattgagggagtaaagtgtatattttaacttaaga 38973170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 154
Target Start/End: Original strand, 18997048 - 18997112
Alignment:
Q  87 ttttttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataa 154  Q
    ||||||||||||||||| |   || ||||||| ||||| |||||| ||||||||| ||||||||||||    
T  18997048 ttttttgctagattatttg---tactaaaaaaaaatatcgagggaataaagtgtaaattttaacataa 18997112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 95 - 156
Target Start/End: Complemental strand, 31364105 - 31364045
Alignment:
Q  95 tagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    ||||||||||||||||| |||||| | |||||||||| ||||| |||||||| |||| ||||    
T  31364105 tagattattagaaataa-aaaaaaaattattgagggactaaagcgtagatttaaacacaaga 31364045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 117
Target Start/End: Original strand, 36143724 - 36143769
Alignment:
Q  72 tgtgttaaattattattttttgctagattattagaaataataaaaa 117  Q
    ||||||| |||||||||||||||||  ||||||||||||| |||||    
T  36143724 tgtgttagattattattttttgctaagttattagaaataaaaaaaa 36143769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 276
Target Start/End: Original strand, 10357097 - 10357165
Alignment:
Q  208 ctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagaggagagtgtaattc 276  Q
    |||| |||||||||||||||||| ||  || ||||||||||||| ||| | | |||| |||||||||||    
T  10357097 ctaatatgttttgaataagaggggaggggagtgtatattttaacataagaggggaggggagtgtaattc 10357165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 251
Target Start/End: Original strand, 11470427 - 11470512
Alignment:
Q  167 gtaattcaagcttctcttaggggaggagagtgaannnnnnnctaacatgttttgaataagagggaagaa-gaatgtatattttaac 251  Q
    |||||||||| |||| ||||||||||||||||||       |||| |||||||| |||||||| || || || |||||||||||||    
T  11470427 gtaattcaagtttcttttaggggaggagagtgaaatgttttctaatatgttttgcataagaggtaaaaatgagtgtatattttaac 11470512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 53
Target Start/End: Original strand, 34831201 - 34831241
Alignment:
Q  13 aatatgtattaaattttttattatattaaaatagacccgca 53  Q
    |||||||||| || |||| ||||||||||||||||||||||    
T  34831201 aatatgtattcaaattttgattatattaaaatagacccgca 34831241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 216 - 276
Target Start/End: Original strand, 36451613 - 36451673
Alignment:
Q  216 ttttgaataagagggaagaagaatgtatattttaacttaaaaagagaggagagtgtaattc 276  Q
    ||||||||||||  |||||| ||||||||||||||| ||||| |||||   ||||||||||    
T  36451613 ttttgaataagaaagaagaaaaatgtatattttaacataaaaggagagtgaagtgtaattc 36451673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0105 (Bit Score: 133; Significance: 4e-69; HSPs: 1)
Name: scaffold0105
Description:

Target: scaffold0105; HSP #1
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 8 - 276
Target Start/End: Original strand, 19420 - 19691
Alignment:
Q  8 cgaagaatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnn-aagtgtgttaaattattattttttgctagattattaga 106  Q
    |||| |||||||||| ||||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||||||    
T  19420 cgaaaaatatgtattcaattttttattatattaaaatagacccgcaatactattttttttttaagtgtgttaaattattattttttgctagattattaga 19519  T
Q  107 aataataaaaaagaatattgagggagtaaagtgtagattttaacataaga--nnnnnnnnatgtaattcaagcttctcttaggggaggagagtgaannnn 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||| |||||||        
T  19520 aataataaaaaagaatattgagggagtaaagtgtagattttaacataagaggggagggagatgtaattcaagcttctcttaggggaggggagtgaaattt 19619  T
Q  205 nnnctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagaggagagtgtaattc 276  Q
       |||| |||||||||||||||||| ||  || ||||||||||||||||| | | |||| |||||||||||    
T  19620 tttctaatatgttttgaataagaggggaggggagtgtatattttaacttaagaggggaggggagtgtaattc 19691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 132; Significance: 1e-68; HSPs: 60)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 8 - 276
Target Start/End: Complemental strand, 14873317 - 14873047
Alignment:
Q  8 cgaagaatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnnaagtgtgttaaattattattttttgctagattattagaa 107  Q
    |||| ||||| |||| ||||||||||||||||||||||||||||||||| ||         |||||||||||||||||||||||||||||||||||||||    
T  14873317 cgaaaaatatatattcaattttttattatattaaaatagacccgcaataatatatttttttaagtgtgttaaattattattttttgctagattattagaa 14873218  T
Q  108 ataataaaaaagaatattgagggagtaaagtgtagattttaacataaga--nnnnnnnnatgtaattcaagcttctcttaggggaggagagtgaannnnn 205  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||| | |||||         
T  14873217 ataataaaaaagaatattgagggagtaaagtgtagattttaacataagaggggaggggaatgtaattcaagcttctcttaggggaggggggtgaaatttt 14873118  T
Q  206 nnctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagaggagagtgtaattc 276  Q
      |||| |||||||||||||||||| ||  |||||||||||||||||||| | | |||| |||||||||||    
T  14873117 ttctaatatgttttgaataagaggggaggggaatgtatattttaacttaagaggggaggggagtgtaattc 14873047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 13 - 276
Target Start/End: Complemental strand, 9241153 - 9240888
Alignment:
Q  13 aatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnnaagtgtgttaaattattattttttgctagattattagaaataat 112  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||||||||||||||    
T  9241153 aatatgtattcaattttttattatattaaaatagacccgcaatactatttttttttaagtgtgttaaattattattttttgctagattattagaaataat 9241054  T
Q  113 aaaaaagaatattgagggagtaaagtgtagattttaacataaga--nnnnnnnnatgtaattcaagcttctcttaggggaggagagtgaannnnnnncta 210  Q
    ||||||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||| |||||||       |||    
T  9241053 aaaaaagaatattgagggagtaaagtgtagattttaacataagaggggagggggatgtaattcaagcttctcttaggggaggggagtgaaattttttcta 9240954  T
Q  211 acatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagaggagagtgtaattc 276  Q
    | ||| |||||||||||||| ||   | ||||||||||||||||| | | |||| |||||||||||    
T  9240953 atatgctttgaataagaggggagggaagtgtatattttaacttaagaggggaggggagtgtaattc 9240888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 8 - 276
Target Start/End: Complemental strand, 25528028 - 25527759
Alignment:
Q  8 cgaagaatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnnaagtgtgttaaattattattttttgctagattattagaa 107  Q
    |||| |||||||||| |||||| |||||||||||||||||||| ||||||||         |||||||||||||||||||||||||||||||||||||||    
T  25528028 cgaaaaatatgtatttaattttctattatattaaaatagaccctcaatactatttttttt-aagtgtgttaaattattattttttgctagattattagaa 25527930  T
Q  108 ataataaaaaagaatattgagggagtaaagtgtagattttaacataaga--nnnnnnnnatgtaattcaagcttctcttaggggaggagagtgaannnnn 205  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||| |||||||         
T  25527929 ataataaaaaagaatattgagggagtaaagtgtagattttaacataagaggggagggagatgtaattcaagcttctcttaggggaggggagtgaaaattt 25527830  T
Q  206 nnctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagaggagagtgtaattc 276  Q
      |||| |||||||||||||||||| ||  || ||||||||||||||||| | | ||||||||||||||||    
T  25527829 ttctaatatgttttgaataagaggggaggggagtgtatattttaacttaagaggggaggagagtgtaattc 25527759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 8 - 276
Target Start/End: Original strand, 188209 - 188478
Alignment:
Q  8 cgaagaatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnnaagtgtgttaaattattattttttgctagattattagaa 107  Q
    |||| |||||||||| |||||||||||||| |||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||    
T  188209 cgaaaaatatgtattcaattttttattatactaaaatagacccgcaatactatttttttt-aagtgtgttaaattattattttttgctagattattagaa 188307  T
Q  108 ataataaaaaagaatattgagggagtaaagtgtagattttaacataaga--nnnnnnnnatgtaattcaagcttctcttaggggaggagagtgaannnnn 205  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||| |||||||         
T  188308 ataataaaaaagaatattgagggagtaaagtgtagattttaacataagaggggagggggatgtaattcaagcttctcttaggggaggggagtgaaatttt 188407  T
Q  206 nnctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagaggagagtgtaattc 276  Q
      |||| |||||||||||||||||  ||  || ||||||||||||||||| | | |||| |||||||||||    
T  188408 ttctaatatgttttgaataagaggagaggggagtgtatattttaacttaagaggggaggggagtgtaattc 188478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 8 - 276
Target Start/End: Original strand, 12025973 - 12026242
Alignment:
Q  8 cgaagaatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnnaagtgtgttaaattattattttttgctagattattagaa 107  Q
    |||| |||||||||| ||||||||||||||||||||||||| ||||||||||         ||||||||||||||||| |||||||||||||||||||||    
T  12025973 cgaaaaatatgtattcaattttttattatattaaaatagactcgcaatactatttttttt-aagtgtgttaaattattcttttttgctagattattagaa 12026071  T
Q  108 ataataaaaaagaatattgagggagtaaagtgtagattttaacataaga--nnnnnnnnatgtaattcaagcttctcttaggggaggagagtgaannnnn 205  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||| |||||||         
T  12026072 ataataaaaaagaatattgagggagtaaagtgtagattttaacataagaggggagggggatgtaattcaagcttctcttaggggaggggagtgaaatttt 12026171  T
Q  206 nnctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagaggagagtgtaattc 276  Q
      |||| |||||||||||||||||| ||  || ||||||||||||| ||| | | |||| |||||||||||    
T  12026172 ctctaatatgttttgaataagaggggaggggagtgtatattttaacataagaggggaggggagtgtaattc 12026242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 69 - 276
Target Start/End: Original strand, 12032953 - 12033162
Alignment:
Q  69 aagtgtgttaaattattattttttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga--nnnnnnnnat 166  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||          ||    
T  12032953 aagtgtgttaaattattattttttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataagaggggagggggat 12033052  T
Q  167 gtaattcaagcttctcttaggggaggagagtgaannnnnnnctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagaggag 266  Q
    |||||||||||||||||||||||||| |||||||       |||| |||||||||||||||||| ||  || ||||||||||||||||| | | |||| |    
T  12033053 gtaattcaagcttctcttaggggaggggagtgaaattttctctaatatgttttgaataagaggggaggggagtgtatattttaacttaagaggggagggg 12033152  T
Q  267 agtgtaattc 276  Q
    ||||||||||    
T  12033153 agtgtaattc 12033162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 24 - 276
Target Start/End: Original strand, 3767537 - 3767791
Alignment:
Q  24 aattttttattatattaaaatagacccgcaatactannnnnnnnnaagtgtgttaaattattattttttgctagattattagaaataataaaaaagaata 123  Q
    ||||||||||||||||||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3767537 aattttttattatattaaaatagacccgcaatactattattttttaagtgtgttaaattattattttttgctagattattagaaataataaaaaagaata 3767636  T
Q  124 ttgagggagtaaagtgtagattttaacataaga--nnnnnnnnatgtaattcaagcttctcttaggggaggagagtgaannnnnnnctaacatgttttga 221  Q
    || ||||||||||||||||||||||||||||||          |||||||||||| ||||||||| ||||| |||||||       | || || ||||||    
T  3767637 ttaagggagtaaagtgtagattttaacataagaggggagggggatgtaattcaagtttctcttagaggaggggagtgaaattttttcaaatatattttga 3767736  T
Q  222 ataagagggaagaagaatgtatattttaacttaaaaagagaggagagtgtaattc 276  Q
    ||||||||| ||| || ||||||||||||||||| | | |||  |||||||||||    
T  3767737 ataagaggggagaggagtgtatattttaacttaagaggggagatgagtgtaattc 3767791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 8 - 276
Target Start/End: Complemental strand, 11523095 - 11522829
Alignment:
Q  8 cgaagaatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnnaagtgtgttaaattattattttttgctagattattagaa 107  Q
    |||| |||||||||| ||||||||||||||||||||||||||||||||| ||           |||||||||||||||||||||||||||||||||| ||    
T  11523095 cgaaaaatatgtattcaattttttattatattaaaatagacccgcaataatatttttttt---gtgtgttaaattattattttttgctagattattaaaa 11522999  T
Q  108 ataataaaaaagaatattgagggagtaaagtgtagattttaacataaga-nnnnnnnnatgtaattcaagcttctcttaggggaggagagtgaannnnnn 206  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||         ||||||||||||||||||||||| |||| | |||||          
T  11522998 ataataaaaaagaatattgagggagtaaagtgtagattttaacataagaggggaggggatgtaattcaagcttctcttaggagaggggggtgaaattttt 11522899  T
Q  207 nctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagaggagagtgtaattc 276  Q
     |||| || ||||||||||||||| ||  || ||||||||||||||||| | | |||| |||||||||||    
T  11522898 tctaatatattttgaataagaggggaggggagtgtatattttaacttaagaggggaggggagtgtaattc 11522829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 8 - 276
Target Start/End: Complemental strand, 5443309 - 5443040
Alignment:
Q  8 cgaagaatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnnaagtgtgttaaattattattttttgctagattattagaa 107  Q
    |||| |||||||||| |||||||||||||||||||||||||| |||||| ||         |||||||||||||||||||||||||||||||||||| ||    
T  5443309 cgaaaaatatgtattcaattttttattatattaaaatagaccggcaataatatatttttt-aagtgtgttaaattattattttttgctagattattataa 5443211  T
Q  108 ataataaaaaagaatattgagggagtaaagtgtagattttaacataaga--nnnnnnnnatgtaattcaagcttctcttaggggaggagagtgaannnnn 205  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||          ||||||||||| |||||||||||||||| | | |||         
T  5443210 ataataaaaaagaatattgagggagtaaaatgtagattttaacataagaggggagggggatgtaattcaaacttctcttaggggaggggggagaaatttt 5443111  T
Q  206 nnctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagaggagagtgtaattc 276  Q
      |||| |||||||||||||||||| ||  || ||||||||||||||||| ||| ||||  ||||||||||    
T  5443110 ttctaatatgttttgaataagaggggaggggagtgtatattttaacttaagaagggagggaagtgtaattc 5443040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 8 - 192
Target Start/End: Complemental strand, 34709525 - 34709340
Alignment:
Q  8 cgaagaatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnnaagtgtgttaaattattattttttgctagattattagaa 107  Q
    |||| |||||||||| ||||||||||||||||||||||||||||||||| ||         |||||||||||||||||||||||||||||||||||| ||    
T  34709525 cgaaaaatatgtattcaattttttattatattaaaatagacccgcaataatatttttttt-aagtgtgttaaattattattttttgctagattattaaaa 34709427  T
Q  108 ataataaaaaagaatattgagggagtaaagtgtagattttaacataaga--nnnnnnnnatgtaattcaagcttctcttaggggagg 192  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||||    
T  34709426 ataataaaaaagaatattgagggagtaaagtgtagattttaacataagaggggagagggatgtaattcaagcttctcttaggggagg 34709340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 91 - 276
Target Start/End: Original strand, 25577059 - 25577246
Alignment:
Q  91 ttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga--nnnnnnnnatgtaattcaagcttctcttaggg 188  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||    
T  25577059 ttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataagaggggagggggatgtaattcaagcttctcttaggg 25577158  T
Q  189 gaggagagtgaannnnnnnctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagaggagagtgtaattc 276  Q
    |||| |||||||       |||| |||||||||||||||||| ||  || ||||||||||||||||| | | || | |||||||||||    
T  25577159 gaggggagtgaaattttttctaatatgttttgaataagaggggaggtgagtgtatattttaacttaagaggggatgggagtgtaattc 25577246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 91 - 275
Target Start/End: Original strand, 34280539 - 34280725
Alignment:
Q  91 ttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga--nnnnnnnnatgtaattcaagcttctcttaggg 188  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||          ||||||||||||||||||||||||    
T  34280539 ttgctagattattagaaataataaaaaagaatatttagggagtaaagtgtagattttaacgtaagaggggagggggatgtaattcaagcttctcttaggg 34280638  T
Q  189 gaggagagtgaannnnnnnctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagaggagagtgtaatt 275  Q
    |||| |||||||       |||| |||||||||||||||||| ||  || ||||||||||||||||| | | |||| ||||||||||    
T  34280639 gaggggagtgaaattttttctaatatgttttgaataagaggggaggggagtgtatattttaacttaagaggggaggggagtgtaatt 34280725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 13 - 230
Target Start/End: Complemental strand, 4100815 - 4100595
Alignment:
Q  13 aatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnn--aagtgtgttaaattatta-ttttttgctagattattagaaat 109  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||           |||| ||||| ||||||| |||||||||||||||||||||||    
T  4100815 aatatgtattcaattttttattatattaaaatagacccgcaatactattttttttccaaagtatgttagattattacttttttgctagattattagaaat 4100716  T
Q  110 aataaaaaagaatattgagggagtaaagtgtagattttaacataaga--nnnnnnnnatgtaattcaagcttctcttaggggaggagagtgaannnnnnn 207  Q
      ||||||| ||||| |||||||||||||||||||||||||||||||          ||||||||||||||||||||| |||||| |||||||           
T  4100715 --taaaaaaaaatatggagggagtaaagtgtagattttaacataagaggggaggagaatgtaattcaagcttctcttaagggaggggagtgaaaagtttt 4100618  T
Q  208 ctaacatgttttgaataagaggg 230  Q
    |||||||||||||||||||||||    
T  4100617 ctaacatgttttgaataagaggg 4100595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 13 - 230
Target Start/End: Complemental strand, 4126178 - 4125957
Alignment:
Q  13 aatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnn---aagtgtgttaaattatta-ttttttgctagattattagaaa 108  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||            |||| ||||| ||||||| ||||||||||||||||||||||    
T  4126178 aatatgtattcaattttttattatattaaaatagacccgcaatactatttttttttccaaagtatgttagattattacttttttgctagattattagaaa 4126079  T
Q  109 taataaaaaagaatattgagggagtaaagtgtagattttaacataaga--nnnnnnnnatgtaattcaagcttctcttaggggaggagagtgaannnnnn 206  Q
    |  ||||||| ||||| |||||||||||||||||||||||||||||||          ||||||||||||||||||||| |||||| |||||||          
T  4126078 t--taaaaaaaaatatggagggagtaaagtgtagattttaacataagaggggaggagaatgtaattcaagcttctcttaagggaggggagtgaaaagttt 4125981  T
Q  207 nctaacatgttttgaataagaggg 230  Q
     |||||||||||||||||||||||    
T  4125980 tctaacatgttttgaataagaggg 4125957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 98 - 276
Target Start/End: Original strand, 7127522 - 7127702
Alignment:
Q  98 attattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga--nnnnnnnnatgtaattcaagcttctcttaggggaggaga 195  Q
    |||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||| ||    
T  7127522 attattagaaaatataaaaaagaatattgagggagtaaagtgtagattttaacataagaggggagggggatgtaattcaagcttctcttaggggagggga 7127621  T
Q  196 gtgaannnnnnnctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagaggagagtgtaattc 276  Q
    |||||       |||| |||||||||||||||||| ||  || |||| |||||||||||||| | |||| |||||||||||    
T  7127622 gtgaaattttttctaatatgttttgaataagaggggaggggagtgtacattttaacttaaaaggggaggggagtgtaattc 7127702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 8 - 156
Target Start/End: Complemental strand, 10702562 - 10702415
Alignment:
Q  8 cgaagaatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnnaagtgtgttaaattattattt-tttgctagattattaga 106  Q
    |||| |||||||||| |||||||||||||||||||||||||| |||||||||         |||||||||| |||||||||  ||| |||||||||||||    
T  10702562 cgaaaaatatgtattcaattttttattatattaaaatagaccagcaatactatttttatcaaagtgtgttagattattattaattttctagattattaga 10702463  T
Q  107 aataataaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    ||||| ||| ||  ||||||||||||||||||||||||||||||||||||    
T  10702462 aataaaaaataa--atattgagggagtaaagtgtagattttaacataaga 10702415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 13 - 156
Target Start/End: Complemental strand, 22268697 - 22268559
Alignment:
Q  13 aatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnnaagtgtgttaaattattatttt-ttgctagattattagaaataa 111  Q
    |||||||||| |||||||||||||||||||||||| |||||||||||         |||||||||||||||||||||| |||||||||||||| ||||||    
T  22268697 aatatgtattcaattttttattatattaaaatagatccgcaatactattttttt--aagtgtgttaaattattattttcttgctagattattataaataa 22268600  T
Q  112 taaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
      ||||    |||||||||||||||||||| ||||||||||||||    
T  22268599 ataaaa----tattgagggagtaaagtgtaaattttaacataaga 22268559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 69 - 256
Target Start/End: Complemental strand, 31281852 - 31281662
Alignment:
Q  69 aagtgtgttaaattattatt--ttttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga--nnnnnnnn 164  Q
    ||||||||||||||||| ||  ||||||||||||||||||||||| |||||   |||||||||| ||||||||||||||||| |||||||              
T  31281852 aagtgtgttaaattatttttctttttgctagattattagaaataaaaaaaat--atattgagggtgtaaagtgtagattttatcataagaggggatgaga 31281755  T
Q  165 atgtaattcaagcttctcttaggggaggagagtgaannnnnnnctaacatgttttgaataagaggga-agaagaatgtatattttaacttaaa 256  Q
    |||||||||||||||||||| |||||||| | ||||       |||| ||||||||||||||||||| |||| ||||||||||||||| ||||    
T  31281754 atgtaattcaagcttctcttgggggaggaaattgaaaagttttctaatatgttttgaataagagggagagaaaaatgtatattttaacataaa 31281662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 13 - 155
Target Start/End: Complemental strand, 14224124 - 14223983
Alignment:
Q  13 aatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnnaagtgtgttaaattattatttttt-gctagattattagaaataa 111  Q
    |||||||||| ||||||||| ||| |||||||||||| |||||||||         |||||||||| ||||||||||||| |||||||||| | ||||||    
T  14224124 aatatgtatttaattttttactattttaaaatagaccagcaatactatttttttg-aagtgtgttatattattatttttttgctagattatgaaaaataa 14224026  T
Q  112 taaaaaagaatattgagggagtaaagtgtagattttaacataag 155  Q
      ||||| ||||||||||||||||||||||||||||||||||||    
T  14224025 ataaaaa-aatattgagggagtaaagtgtagattttaacataag 14223983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 8 - 276
Target Start/End: Complemental strand, 6936673 - 6936404
Alignment:
Q  8 cgaagaatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnnaa-gtgtgttaaattattattt-tttgctagattattag 105  Q
    |||| |||||||||| || | || ||||||||||||||||||||||||||||         || |||||||  ||| |||||| ||||||||||||||||    
T  6936673 cgaaaaatatgtattcaaatattgattatattaaaatagacccgcaatactatttttttctaaagtgtgttggatttttatttatttgctagattattag 6936574  T
Q  106 aaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga--nnnnnnnnatgtaattcaagcttctcttaggggaggagagtgaannn 203  Q
    ||||  ||||||| ||||||||||||||||| |||| ||||||||||||||          ||||||||||||||||||||||| |||| ||||||        
T  6936573 aaat--taaaaaa-aatattgagggagtaaaatgtaaattttaacataagaggggagaagaatgtaattcaagcttctcttaggagaggggagtgataag 6936477  T
Q  204 nnnnctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagaggagagtgtaattc 276  Q
        |||| ||||||| ||||| |||| |  ||| ||||||||||||| ||| | | ||||||||||||||||    
T  6936476 ttttctaatatgttttaaataataggggatgagagtgtatattttaacataagaggggaggagagtgtaattc 6936404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 13 - 276
Target Start/End: Complemental strand, 32114032 - 32113768
Alignment:
Q  13 aatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnn-aagtgtgttaaattattatttttt--gctagattattagaaat 109  Q
    ||||||||||  |||||||||| |||||||||||||| | |||||||          ||||| |||| |||||||||||||  |||||||| ||||||||    
T  32114032 aatatgtattcgattttttattgtattaaaatagacctgaaatactattttttttctaagtgcgttagattattattttttttgctagatttttagaaat 32113933  T
Q  110 aataaaaaagaatattgagggagtaaagtgtagattttaacataaga--nnnnnnnnatgtaattcaagcttctcttaggggaggagagtgaannnnnnn 207  Q
    || |||||    |||||| ||||||||||||||||||||||||||||          | |||||||||||||||||||||||||| |||||||           
T  32113932 aaaaaaaa----tattgaaggagtaaagtgtagattttaacataagaggggaggggaaagtaattcaagcttctcttaggggaggggagtgaaaagtttt 32113837  T
Q  208 ctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagaggagagtgtaattc 276  Q
    ||||||| ||||||||||||||| ||  || ||||||||||||| ||| | | ||||  ||||||||||    
T  32113836 ctaacatattttgaataagaggggaggggagtgtatattttaacataagaggggagggaagtgtaattc 32113768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 69 - 276
Target Start/End: Original strand, 34794359 - 34794567
Alignment:
Q  69 aagtgtgttaaattattattttttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga--nnnnnnnnat 166  Q
    |||||||||| |||||| ||||||||||||||||||||||||| || ||| ||| |||||||||||||| ||||||||||||||||||          ||    
T  34794359 aagtgtgttagattatttttttttgctagattattagaaataa-aataaaaaatgttgagggagtaaagagtagattttaacataagaggggagatgaat 34794457  T
Q  167 gtaattcaagcttctcttaggggaggagagtgaannnnnnnctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagaggag 266  Q
    |||||||||| |||||| | |||||| |||||||       |||| |||||||||| |||| || || | | ||||||||||||| ||| | | |||| |    
T  34794458 gtaattcaagtttctctcaagggaggggagtgaagtattttctaatatgttttgaaaaagatgggaggaaagtgtatattttaacataagaggggagggg 34794557  T
Q  267 agtgtaattc 276  Q
    ||||||||||    
T  34794558 agtgtaattc 34794567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 69 - 276
Target Start/End: Complemental strand, 31882079 - 31881870
Alignment:
Q  69 aagtgtgttaaattattatt--ttttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga--nnnnnnnn 164  Q
    |||||||||| |||||||||  ||||||||||||||||||||||| |||| | | |||||||||||||||||||||||||||||||||||              
T  31882079 aagtgtgttagattattattatttttgctagattattagaaataaaaaaatata-tattgagggagtaaagtgtagattttaacataagaggggagggga 31881981  T
Q  165 atgtaattcaagcttctcttaggggaggagagtgaannnnnnnctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagagg 264  Q
    ||||||||||  |||||||||  |||||||| ||||       |||| |||||||||||||||||  ||  || ||||||||||||| ||||| | ||||    
T  31881980 atgtaattcatacttctctta-aggaggagattgaaatgttttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaggggagg 31881882  T
Q  265 agagtgtaattc 276  Q
     |||||||||||    
T  31881881 ggagtgtaattc 31881870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 13 - 156
Target Start/End: Original strand, 7448675 - 7448818
Alignment:
Q  13 aatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnn-aagtgtgttaaattattatttttt-gctagattattagaaata 110  Q
    |||||||||| || ||||| ||||||||||||||| |||||||||||          |||||||||| ||||||||||||| ||||||||||||||| ||    
T  7448675 aatatgtattcaaatttttgttatattaaaatagatccgcaatactatttatttttgaagtgtgttacattattatttttttgctagattattagaatta 7448774  T
Q  111 ataaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    | ||||||  ||  ||||||||||||||||||||||||||||||||    
T  7448775 aaaaaaaatcat--tgagggagtaaagtgtagattttaacataaga 7448818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 69 - 156
Target Start/End: Complemental strand, 17337061 - 17336976
Alignment:
Q  69 aagtgtgttaaattattatt-ttttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    |||||||||  ||||||||| ||||||||||||||||||||||| |||||    |||||||||||||||||||||||||||||||||||    
T  17337061 aagtgtgtttgattattattgttttgctagattattagaaataaaaaaaat---tattgagggagtaaagtgtagattttaacataaga 17336976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 69 - 276
Target Start/End: Complemental strand, 2091924 - 2091717
Alignment:
Q  69 aagtgtgttaaattattattttttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataagannnnnnnna--t 166  Q
    |||||||||| ||||||  | |||||||||||||||||||||| |||| | | |||||| ||| ||||   ||||||||||| |||||        |  |    
T  2091924 aagtgtgttagattatt--tgtttgctagattattagaaataaaaaaatatattattgaaggactaaaacatagattttaacttaagaggggagggaaat 2091827  T
Q  167 gtaattcaagcttctcttaggggaggagagtgaannnnnnnctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagaggag 266  Q
    ||||||||||||||||| | ||||||||||||||       |||| |||||||||||||||||||||   | ||||||||||||| ||| | | |||| |    
T  2091826 gtaattcaagcttctctcaagggaggagagtgaaatattttctaatatgttttgaataagagggaaggtaagtgtatattttaacataagaggggagggg 2091727  T
Q  267 agtgtaattc 276  Q
    ||||||||||    
T  2091726 agtgtaattc 2091717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 8 - 156
Target Start/End: Original strand, 28494668 - 28494814
Alignment:
Q  8 cgaagaatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnnaagtgtgttaaattattatttttt-gctagattattaga 106  Q
    |||| |||||||||| || |||| ||||||||||||||| || |||||||||         |||||| ||| ||||||||||||| |||||| |||||||    
T  28494668 cgaaaaatatgtattcaaattttgattatattaaaataggcc-gcaatactattttttcg-aagtgtattagattattatttttttgctagactattaga 28494765  T
Q  107 aataataaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    ||||| |||||  | ||||||||||||| |||||||||||||||||||||    
T  28494766 aataa-aaaaattattattgagggagtagagtgtagattttaacataaga 28494814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 8 - 156
Target Start/End: Original strand, 29807077 - 29807223
Alignment:
Q  8 cgaagaatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnnaagtgtgttaaattattatttttt-gctagattattaga 106  Q
    |||| |||||||||| || |||| ||||||||||||||| || |||||||||         |||||| ||| ||||||||||||| |||||| |||||||    
T  29807077 cgaaaaatatgtattcaaattttgattatattaaaataggcc-gcaatactattttttcg-aagtgtattagattattatttttttgctagactattaga 29807174  T
Q  107 aataataaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    ||||| |||||  | ||||||||||||| |||||||||||||||||||||    
T  29807175 aataa-aaaaattattattgagggagtagagtgtagattttaacataaga 29807223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 95 - 200
Target Start/End: Original strand, 2655448 - 2655552
Alignment:
Q  95 tagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacat-aagannnnnnnnatgtaattcaagcttctcttaggggagga 193  Q
    |||||||||||||||||  |||||  |||||||||||||||||||||||||||||||| |||         ||||||||||| ||||||||||||||||     
T  2655448 tagattattagaaataaataaaaa--atattgagggagtaaagtgtagattttaacataaaggagagggaaatgtaattcaaacttctcttaggggaggg 2655545  T
Q  194 gagtgaa 200  Q
    |||||||    
T  2655546 gagtgaa 2655552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 13 - 156
Target Start/End: Original strand, 30461891 - 30462039
Alignment:
Q  13 aatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnn--aagtgtgttaaattattatttttt-gctagattattagaaat 109  Q
    |||||| ||| |||||||||||||||||||||||||||| |||||||           ||||| |||  |||||| |||||| |||| ||| ||||||||    
T  30461891 aatatgcattcaattttttattatattaaaatagacccgaaatactatttttttttttaagtgagtttgattattttttttttgctatatttttagaaat 30461990  T
Q  110 aataaaaaagaatat--tgagggagtaaagtgtagattttaacataaga 156  Q
    || |||||| |||||  ||| ||||||||||||||||||||||||||||    
T  30461991 aaaaaaaaaaaatatattgatggagtaaagtgtagattttaacataaga 30462039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 87 - 156
Target Start/End: Original strand, 2523191 - 2523260
Alignment:
Q  87 ttttttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    |||||||||||||||||| |||||| | |||| | |||||||||||||||| ||||||||||||| ||||    
T  2523191 ttttttgctagattattaaaaataaaataaaaaattattgagggagtaaagcgtagattttaacacaaga 2523260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 87 - 192
Target Start/End: Complemental strand, 12767154 - 12767049
Alignment:
Q  87 ttttttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga--nnnnnnnnatgtaattcaagcttctctt 184  Q
    |||||||||| ||||||||||||  ||||||| ||||| || ||||||||||||| ||||||||||||||          ||||||||||||||||||||    
T  12767154 ttttttgctacattattagaaat--taaaaaaaaatatcgaaggagtaaagtgtaaattttaacataagaggggaggagaatgtaattcaagcttctctt 12767057  T
Q  185 aggggagg 192  Q
    ||||||||    
T  12767056 aggggagg 12767049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 87 - 156
Target Start/End: Original strand, 33276268 - 33276332
Alignment:
Q  87 ttttttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    |||||||||||||||||||||    ||||||| |||||||||||||||||| ||||||||||||||||||    
T  33276268 ttttttgctagattattagaa----taaaaaa-aatattgagggagtaaagcgtagattttaacataaga 33276332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 59
Target Start/End: Original strand, 25576995 - 25577046
Alignment:
Q  8 cgaagaatatgtattaaattttttattatattaaaatagacccgcaatacta 59  Q
    |||| |||||||||| ||||||||||||||||||||||||| ||||||||||    
T  25576995 cgaaaaatatgtattcaattttttattatattaaaatagactcgcaatacta 25577046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 83 - 156
Target Start/End: Complemental strand, 34250280 - 34250210
Alignment:
Q  83 attattttttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    |||||||||||||||||||||||||   |||||||| |||||||||||| ||||| ||| |||||||| |||||    
T  34250280 attattttttgctagattattagaa---ataaaaaaaaatattgagggaataaagcgtatattttaacttaaga 34250210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 59
Target Start/End: Original strand, 34280472 - 34280523
Alignment:
Q  8 cgaagaatatgtattaaattttttattatattaaaatagacccgcaatacta 59  Q
    |||| |||||||||| ||||||||||||||||||||||||| ||||||||||    
T  34280472 cgaaaaatatgtattcaattttttattatattaaaatagactcgcaatacta 34280523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 8 - 100
Target Start/End: Original strand, 2661579 - 2661672
Alignment:
Q  8 cgaagaatatgtattaaatttttta-ttatattaaaatagacccgcaatactannnnnnnnnaagtgtgttaaattattattttttgctagatt 100  Q
    |||| |||||||||| ||||||||  |||||||||||||||||||| ||||||         |||||||||| |||||||||||||||||||||    
T  2661579 cgaaaaatatgtatttaatttttttgttatattaaaatagacccgcgatactatttttttcgaagtgtgttagattattattttttgctagatt 2661672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 87 - 152
Target Start/End: Original strand, 5916589 - 5916651
Alignment:
Q  87 ttttttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacat 152  Q
    ||||||||||||||||||||||||| |||||| | ||   | ||||||||||||||||||||||||    
T  5916589 ttttttgctagattattagaaataaaaaaaaaaatta---aaggagtaaagtgtagattttaacat 5916651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 51
Target Start/End: Original strand, 7127452 - 7127495
Alignment:
Q  8 cgaagaatatgtattaaattttttattatattaaaatagacccg 51  Q
    |||| |||||||||| ||||||||||||||||||||||||||||    
T  7127452 cgaaaaatatgtattcaattttttattatattaaaatagacccg 7127495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 165 - 200
Target Start/End: Complemental strand, 22022112 - 22022077
Alignment:
Q  165 atgtaattcaagcttctcttaggggaggagagtgaa 200  Q
    ||||||||||||||||||||||||||||||||||||    
T  22022112 atgtaattcaagcttctcttaggggaggagagtgaa 22022077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 69 - 156
Target Start/End: Original strand, 11721451 - 11721535
Alignment:
Q  69 aagtgtgttaaattatta-ttttttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    |||||||||||||||||| |||||| ||||||||||||   |||||||||| | ||||||||  ||||||  |||||||||||||||||    
T  11721451 aagtgtgttaaattattatttttttcctagattattag---taataaaaaa-attattgaggatgtaaaggatagattttaacataaga 11721535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 124 - 276
Target Start/End: Original strand, 17311989 - 17312143
Alignment:
Q  124 ttgagggagtaaagtgtagattttaacataaga--nnnnnnnnatgtaattcaagcttctcttaggggaggagagtgaannnnnnnctaacatgttttga 221  Q
    |||||||||||||||||||||||| ||||||||          |||||||| ||||||||||||||||||  |||| ||       |||| |||||||||    
T  17311989 ttgagggagtaaagtgtagatttttacataagaggggagggggatgtaattaaagcttctcttaggggagaggagtaaaatgttttctaatatgttttga 17312088  T
Q  222 ataagagggaagaagaatgtatattttaacttaaaaagagaggagagtgtaattc 276  Q
    ||||||||| | |||| | ||||||||||| ||| |   |||| |||||||||||    
T  17312089 ataagaggggataagagtttatattttaacataagagtggaggggagtgtaattc 17312143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 276
Target Start/End: Complemental strand, 33950366 - 33950255
Alignment:
Q  165 atgtaattcaagcttctcttaggggaggagagtgaannnnnnnctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagagg 264  Q
    ||||||||||||||||||| | |||||| |||||||       |||| |||||||||||||||||| ||  || ||||||||||||  ||| | | ||||    
T  33950366 atgtaattcaagcttctctcaagggaggggagtgaaatattttctaatatgttttgaataagaggggaggggagtgtatattttaaaataagaggggagg 33950267  T
Q  265 agagtgtaattc 276  Q
    ||||||| ||||    
T  33950266 agagtgtgattc 33950255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 111 - 156
Target Start/End: Complemental strand, 12025610 - 12025565
Alignment:
Q  111 ataaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    |||||||| |||||||||||||||||||||| |||||||| |||||    
T  12025610 ataaaaaaaaatattgagggagtaaagtgtatattttaacttaaga 12025565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 166 - 276
Target Start/End: Complemental strand, 21802078 - 21801968
Alignment:
Q  166 tgtaattcaagcttctcttaggggaggagagtgaannnnnnnctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagagga 265  Q
    ||||||| |||||||||| | |||||| |||||||       |||| |||||||||||||||||| ||  || ||||||||||||| ||| ||  ||||     
T  21802078 tgtaatttaagcttctctcaagggaggggagtgaaatattttctaatatgttttgaataagaggggaggggagtgtatattttaacataagaatggaggg 21801979  T
Q  266 gagtgtaattc 276  Q
    |||||||||||    
T  21801978 gagtgtaattc 21801968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 58
Target Start/End: Complemental strand, 28023859 - 28023814
Alignment:
Q  13 aatatgtattaaattttttattatattaaaatagacccgcaatact 58  Q
    |||||||||| | |||||||||||||||||||||||| ||||||||    
T  28023859 aatatgtatttagttttttattatattaaaatagacctgcaatact 28023814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 165 - 251
Target Start/End: Original strand, 32003797 - 32003883
Alignment:
Q  165 atgtaattcaagcttctcttaggggaggagagtgaannnnnnnctaacatgttttgaataagagggaagaagaatgtatattttaac 251  Q
    ||||||||||||||||||| | |||||| || ||||       |||| |||||||||||||||||| || ||| |||||||||||||    
T  32003797 atgtaattcaagcttctctcaagggaggggaatgaaatattttctaatatgttttgaataagaggggaggagagtgtatattttaac 32003883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 90 - 251
Target Start/End: Original strand, 32522362 - 32522523
Alignment:
Q  90 tttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga-nnnnnnnnatgtaattcaagcttctcttaggg 188  Q
    ||||||||||||||||||| || |||||| | |||||||||| ||||   |||||||||||||||||         ||||||||||||||||| | | ||    
T  32522362 tttgctagattattagaaacaa-aaaaaatattattgagggactaaaacatagattttaacataagagaggagataatgtaattcaagcttctttcaagg 32522460  T
Q  189 gaggagagtgaannnnnnnctaacatgttttgaataagagggaagaagaatgtatattttaac 251  Q
    |||| |||||||       |||| || ||||||||||||||||||   | |||||||||||||    
T  32522461 gaggggagtgaaatattttctaatatattttgaataagagggaagggaagtgtatattttaac 32522523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 111 - 156
Target Start/End: Original strand, 34709898 - 34709943
Alignment:
Q  111 ataaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    |||||||| |||||||||||||||||||||| |||||||| |||||    
T  34709898 ataaaaaaaaatattgagggagtaaagtgtatattttaacttaaga 34709943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 70 - 156
Target Start/End: Complemental strand, 28023800 - 28023708
Alignment:
Q  70 agtgtgttaaattattatttttt-gctagattattagaaataataaaaaagaa-----tattgagggagtaaagtgtagattttaacataaga 156  Q
    ||||| ||| ||||||||||||| |||| |||| | ||||||| |||||| ||     |||||| ||||||||||||||||||||||||||||    
T  28023800 agtgtattagattattatttttttgctacattagttgaaataaaaaaaaaaaaaaaagtattgaaggagtaaagtgtagattttaacataaga 28023708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 113 - 156
Target Start/End: Complemental strand, 187861 - 187818
Alignment:
Q  113 aaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    |||||| |||||||||||||||||||||| |||||||| |||||    
T  187861 aaaaaaaaatattgagggagtaaagtgtatattttaacttaaga 187818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 8 - 59
Target Start/End: Original strand, 2655379 - 2655430
Alignment:
Q  8 cgaagaatatgtattaaattttttattatattaaaatagacccgcaatacta 59  Q
    |||| |||||||||| |||||||| ||||||||||||||| |||| ||||||    
T  2655379 cgaaaaatatgtatttaattttttgttatattaaaatagatccgcgatacta 2655430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 69 - 131
Target Start/End: Complemental strand, 24620141 - 24620082
Alignment:
Q  69 aagtgtgttaaattattattttttgctagattattagaaataataaaaaagaatattgaggga 131  Q
    |||||||||||||||||  ||||| |||||||||||||||||| |||||| | ||||||||||    
T  24620141 aagtgtgttaaattatt--tttttactagattattagaaataa-aaaaaatattattgaggga 24620082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 165 - 200
Target Start/End: Complemental strand, 32131077 - 32131042
Alignment:
Q  165 atgtaattcaagcttctcttaggggaggagagtgaa 200  Q
    |||||||||||||||||||||||||||| |||||||    
T  32131077 atgtaattcaagcttctcttaggggaggggagtgaa 32131042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 156
Target Start/End: Original strand, 9241523 - 9241565
Alignment:
Q  114 aaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    ||||| |||||||||||||||||||||| |||||||| |||||    
T  9241523 aaaaaaaatattgagggagtaaagtgtatattttaacttaaga 9241565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 156
Target Start/End: Original strand, 11523461 - 11523503
Alignment:
Q  114 aaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    ||||| |||||||||||||||||||||| |||||||| |||||    
T  11523461 aaaaaaaatattgagggagtaaagtgtatattttaacttaaga 11523503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 156
Target Start/End: Original strand, 27923733 - 27923775
Alignment:
Q  114 aaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    ||||| |||||||||||||||||||||| |||||||| |||||    
T  27923733 aaaaaaaatattgagggagtaaagtgtatattttaacttaaga 27923775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 156
Target Start/End: Original strand, 14313697 - 14313780
Alignment:
Q  69 aagtgtgttaaattattattttttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    |||||||||| |||||  |||||||||||||||||| ||||||  ||||    || ||||||| |||||||||||||||||| |||||    
T  14313697 aagtgtgttagattatg-ttttttgctagattattataaataaataaaat---tagtgagggactaaagtgtagattttaacttaaga 14313780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 156
Target Start/End: Complemental strand, 34280109 - 34280064
Alignment:
Q  111 ataaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    |||||||| || ||||||||||||||||||| |||||||| |||||    
T  34280109 ataaaaaaaaaaattgagggagtaaagtgtatattttaacttaaga 34280064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 276
Target Start/End: Original strand, 14313826 - 14313894
Alignment:
Q  208 ctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagaggagagtgtaattc 276  Q
    |||| |||||||||||||||||| ||  || ||||||||||||| ||| | | |||| |||||||||||    
T  14313826 ctaatatgttttgaataagaggggaggggattgtatattttaacataagaggggaggggagtgtaattc 14313894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 130; Significance: 2e-67; HSPs: 61)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 8 - 276
Target Start/End: Complemental strand, 14364078 - 14363807
Alignment:
Q  8 cgaagaatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnnaagtgtgttaaattattattttttgctagattattagaa 107  Q
    |||| |||||||||| ||||||||||||||||||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||    
T  14364078 cgaaaaatatgtattcaattttttattatattaaaatagacccgcaatactattttattttaagtgtgttaaattattattttttgctagattattagaa 14363979  T
Q  108 ataataaaaaagaatattgagggagtaaagtgtagattttaacataaga---nnnnnnnnatgtaattcaagcttctcttaggggaggagagtgaannnn 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||            ||||||||||||||||||||||||||| |||||||        
T  14363978 ataataaaaaagaatattgagggagtaaagtgtagattttaacataagaggggagggggggtgtaattcaagcttctcttaggggaggggagtgaaattt 14363879  T
Q  205 nnnctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagaggagagtgtaattc 276  Q
       |||| |||||||||||||||||  ||  || ||||||||||||||||| | | |||| |||||||||||    
T  14363878 tttctaatatgttttgaataagaggtgaggggagtgtatattttaacttaagaggggaggggagtgtaattc 14363807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 13 - 276
Target Start/End: Original strand, 29636170 - 29636431
Alignment:
Q  13 aatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnnaagtgtgttaaattattattttttgctagattattagaaataat 112  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||||||||||| ||    
T  29636170 aatatgtattcaattttttattatattaaaatagacccgcaatactatttttt---aagtgtgttaaattattattttttgctagattattagaaattat 29636266  T
Q  113 aaaaaagaatattgagggagtaaagtgtagattttaacataaga--nnnnnnnnatgtaattcaagcttctcttaggggaggagagtgaannnnnnncta 210  Q
    |||||||||||||||||||||||| |||||||||||||||||||          ||||||||| |||||||||||||||||| |||||||       |||    
T  29636267 aaaaaagaatattgagggagtaaaatgtagattttaacataagaggggagagagatgtaattctagcttctcttaggggaggggagtgaa-atttttcta 29636365  T
Q  211 acatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagaggagagtgtaattc 276  Q
    | |||||||||||||||||| ||  || ||||||||||||||||| | | |||| |||||||||||    
T  29636366 atatgttttgaataagaggggagtggagtgtatattttaacttaagaggggaggggagtgtaattc 29636431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 8 - 276
Target Start/End: Complemental strand, 6292814 - 6292546
Alignment:
Q  8 cgaagaatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnnaagtgtgttaaattattattttttgctagattattagaa 107  Q
    |||| |||||||||| || ||||||||||||||||| |||| ||||||||||         |||||||||||||||||||||||||||||||||||||||    
T  6292814 cgaaaaatatgtattcaactttttattatattaaaacagactcgcaatactattttttt--aagtgtgttaaattattattttttgctagattattagaa 6292717  T
Q  108 ataataaaaaagaatattgagggagtaaagtgtagattttaacataaga--nnnnnnnnatgtaattcaagcttctcttaggggaggagagtgaannnnn 205  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||          |||||||||||||||||||||||||||| |||||||         
T  6292716 ataataaaaaagaatattgagggggtaaagtgtagattttaacataagaggggagggggatgtaattcaagcttctcttaggggaggggagtgaaatttt 6292617  T
Q  206 nnctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagaggagagtgtaattc 276  Q
      |||| |||||||||||||||||| ||  || ||||||||||||||||| | | |||| || ||||||||    
T  6292616 ctctaatatgttttgaataagaggggaggggattgtatattttaacttaagaggggaggggaatgtaattc 6292546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 8 - 276
Target Start/End: Original strand, 10215911 - 10216180
Alignment:
Q  8 cgaagaatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnnaagtgtgttaaattattattttttgctagattattagaa 107  Q
    |||| |||||||||| |||||||||||||||||||||||||||| |||||||         || ||||||||||||||||||||| ||||||||||||||    
T  10215911 cgaaaaatatgtattcaattttttattatattaaaatagacccgtaatactatttttttttaattgtgttaaattattatttttt-ctagattattagaa 10216009  T
Q  108 ataataaaaaagaatattgagggagtaaagtgtagattttaacataaga--nnnnnnnnatgtaattcaagcttctcttaggggaggagagtgaannnnn 205  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||          |||| |||||||||||||||||||| ||| ||||||         
T  10216010 ataataaaaaagaatattgagggagtaaagtgtagattttaacataagaggggagggagatgttattcaagcttctcttaggggtggaaagtgaaatttt 10216109  T
Q  206 nnctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagaggagagtgtaattc 276  Q
      |||| |||||||||||||||||| ||  || |||||||||||||| || | | |||| |||||||||||    
T  10216110 ttctaatatgttttgaataagaggggaggggagtgtatattttaactgaagaggggaggggagtgtaattc 10216180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 8 - 275
Target Start/End: Original strand, 8297578 - 8297846
Alignment:
Q  8 cgaagaatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnnaagtgtgttaaattattattttttgctagattattagaa 107  Q
    |||| |||||||||| ||||||||||||||||||||||||||| ||||| ||         |||||||||||||||||||||||||||||||||||||||    
T  8297578 cgaaaaatatgtattcaattttttattatattaaaatagacccacaataatatttttttt-aagtgtgttaaattattattttttgctagattattagaa 8297676  T
Q  108 ataataaaaaagaatattgagggagtaaagtgtagattttaacataaga--nnnnnnnnatgtaattcaagcttctcttaggggaggagagtgaannnnn 205  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||| ||| |||||         
T  8297677 ataataaaatagaatattgagggagtaaagtgtagattttaacataagaggggagggggatgtaattcaagcttctcttaggggaagagggtgaaatttt 8297776  T
Q  206 nnctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagaggagagtgtaatt 275  Q
      |||| |||||||||||||||||| |    | ||||||||||||||||| | | |||| ||||||||||    
T  8297777 ttctaatatgttttgaataagaggggatggaagtgtatattttaacttaagaggggaggggagtgtaatt 8297846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 8 - 276
Target Start/End: Original strand, 25598233 - 25598502
Alignment:
Q  8 cgaagaatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnnaagtgtgttaaattattattttttgctagattattagaa 107  Q
    |||| |||||||||| ||||||||||||| |||||||||||||||||||||          ||||  |||||||||||||||||||||||||||||||||    
T  25598233 cgaaaaatatgtattcaattttttattatcttaaaatagacccgcaatacttttcttttttaagttcgttaaattattattttttgctagattattagaa 25598332  T
Q  108 ataataaaaaagaatattgagggagtaaagtgtagattttaacataaga--nnnnnnnnatgtaattcaagcttctcttaggggaggagagtgaannnnn 205  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||          ||||||||||||||| |||||||||||| |||||||         
T  25598333 ataataaaaaagaatattgaggtagtaaagtgtagattttaacataagaggggagggggatgtaattcaagcttttcttaggggaggggagtgaaatttt 25598432  T
Q  206 nnctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagaggagagtgtaattc 276  Q
      || | || ||||||||||||||| |||  | ||||||||||||||||| | | |||| |||||||||||    
T  25598433 ttct-atatattttgaataagaggggagagtagtgtatattttaacttaagaggggaggggagtgtaattc 25598502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 13 - 276
Target Start/End: Complemental strand, 22934588 - 22934321
Alignment:
Q  13 aatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnn--aagtgtgttaaattattattttttgctagattattagaaata 110  Q
    |||||||||| |||||||||||| | ||||||||||| |||||||||           |||||||| |||||||||||||||||||||||||||||||||    
T  22934588 aatatgtattcaattttttattaaactaaaatagacctgcaatactatttttatttttaagtgtgtcaaattattattttttgctagattattagaaata 22934489  T
Q  111 ataaaaaagaatattgagggagtaaagtgtagattttaacataaga--nnnnnnnnatgtaattcaagcttctcttaggggaggagagtgaannnnnnnc 208  Q
     |||||||||||||| |||| |||||||||||||||||||||||||          || ||||||||||||||||||||||||| |||||||       |    
T  22934488 gtaaaaaagaatatttagggggtaaagtgtagattttaacataagaggggaggaggatctaattcaagcttctcttaggggaggggagtgaaattttttc 22934389  T
Q  209 taacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagaggagagtgtaattc 276  Q
    ||| |||||||||||||||||| ||  || ||||||||||||||||| | | |||| |||||||||||    
T  22934388 taatatgttttgaataagaggggaggggagtgtatattttaacttaagaggggaggggagtgtaattc 22934321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 74 - 276
Target Start/End: Original strand, 25485267 - 25485471
Alignment:
Q  74 tgttaaattattattttttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga--nnnnnnnnatgtaat 171  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||          |||||||    
T  25485267 tgttaaattattattttttgcgagattattagaaataataaaaaagaatattgagggagtagaatgtagattttaacataagagggtagggggatgtaat 25485366  T
Q  172 tcaagcttctcttaggggaggagagtgaannnnnnnctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagaggagagtgt 271  Q
    |||||||||||||||| |||| |||||||       |||| |||||||||||||||||| ||  || ||||||||||||||||| | | |||| ||||||    
T  25485367 tcaagcttctcttaggagaggggagtgaaattttttctaatatgttttgaataagagggtaggggagtgtatattttaacttaagaggggaggggagtgt 25485466  T
Q  272 aattc 276  Q
    |||||    
T  25485467 aattc 25485471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 8 - 156
Target Start/End: Complemental strand, 37872496 - 37872351
Alignment:
Q  8 cgaagaatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnnaagtgtgttaaattattatt-ttttgctagattattaga 106  Q
    |||| |||||||||| ||||||||||||||||||||||||| ||||||||||         |||||||||| ||||||||| ||||||||||||||||||    
T  37872496 cgaaaaatatgtattcaattttttattatattaaaatagactcgcaatactatttttttcgaagtgtgttagattattattattttgctagattattaga 37872397  T
Q  107 aataataaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    |||  |||||||  ||||||||||||||||||||||||||||||||||||    
T  37872396 aat--taaaaaa--atattgagggagtaaagtgtagattttaacataaga 37872351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 8 - 276
Target Start/End: Complemental strand, 3075609 - 3075338
Alignment:
Q  8 cgaagaatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnnaagtgtgttaaattattatttttt-gctagattattaga 106  Q
    |||| |||||||||| ||||||| ||||||||||||||||||| ||||||||         |||||||||| ||||||||||||| |||||||||||| |    
T  3075609 cgaaaaatatgtattcaattttt-attatattaaaatagacccacaatactatttttttg-aagtgtgttagattattatttttttgctagattattaaa 3075512  T
Q  107 aataa--taaaaaagaatattgagggagtaaagtgtagattttaacataaga--nnnnnnnnatgtaattcaagcttctcttaggggaggagagtgaann 202  Q
    |||||  ||||||  |||||||| ||||||||||||||||||||||||||||          |||||||||||||||||||||||||||| |||||||      
T  3075511 aataaaataaaaattaatattgaaggagtaaagtgtagattttaacataagaggggaggggaatgtaattcaagcttctcttaggggaggggagtgaaaa 3075412  T
Q  203 nnnnnctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagaggagagtgtaattc 276  Q
         | || | |||||||||||||||| |   || ||||||||||||| ||| | | |||| |||||||||||    
T  3075411 aaattcaaataagttttgaataagaggggaagggagtgtatattttaacataagaggggaggggagtgtaattc 3075338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 13 - 251
Target Start/End: Original strand, 8627832 - 8628071
Alignment:
Q  13 aatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnnaagtgtgttaaattattatt-ttttgctagattattagaaataa 111  Q
    |||||||||| || |||| |||||||||||||||| |||| ||||||         |||||||||| ||||||| | ||||| |||||||||||||||||    
T  8627832 aatatgtattgaaattttgattatattaaaatagatccgccatactatttttttcgaagtgtgttagattattactattttgttagattattagaaataa 8627931  T
Q  112 taaaaaagaatattgagggagtaaagtgtagattttaacataagannnnnnnna--tgtaattcaagcttctcttaggggaggagagtgaannnnnnnct 209  Q
      |||||  ||||||||||||||||  |||||||||||| |||||        |  ||| ||||||||||||||||||||||| |||||||       ||    
T  8627932 ataaaaa--atattgagggagtaaatggtagattttaacttaagaggggagggaaatgtcattcaagcttctcttaggggaggggagtgaaatgtattct 8628029  T
Q  210 aacatgttttgaataagagggaagaagaatgtatattttaac 251  Q
    || |||||||||||||||||| || ||| |||||||||||||    
T  8628030 aaaatgttttgaataagaggggaggagagtgtatattttaac 8628071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 8 - 156
Target Start/End: Original strand, 40791536 - 40791678
Alignment:
Q  8 cgaagaatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnnaagtgtgttaaattattattttttgctagattattagaa 107  Q
    |||| ||||| |||| |||||||||||||||| |||||||||||||||||||         ||||| |||| |||||||||||||||||||| |||||||    
T  40791536 cgaaaaatatttattcaattttttattatattgaaatagacccgcaatactatttttca--aagtgcgttagattattattttttgctagataattagaa 40791633  T
Q  108 ataataaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    |||| ||||||    ||||||||||||||||||||||||||| ||||||    
T  40791634 ataaaaaaaaa----attgagggagtaaagtgtagattttaatataaga 40791678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 13 - 156
Target Start/End: Complemental strand, 12331165 - 12331020
Alignment:
Q  13 aatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnnaagtgtgttaaattattatt-ttttgctagattattagaaataa 111  Q
    |||||||||| || |||| |||||||||||||||||||| |||||||         |||||||||| ||||||||| |||||||||||||||||||||||    
T  12331165 aatatgtattcaaattttgattatattaaaatagacccgaaatactatttttttcgaagtgtgttatattattattattttgctagattattagaaataa 12331066  T
Q  112 taaaaaagaat-attgagggagtaaagtgtagattttaacataaga 156  Q
     | |||| | | || |||||||||||||||||||||||||||||||    
T  12331065 aataaaaaatttatcgagggagtaaagtgtagattttaacataaga 12331020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 13 - 276
Target Start/End: Complemental strand, 36016385 - 36016121
Alignment:
Q  13 aatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnnaagtgtgttaaattattattttttgctagattattagaaataat 112  Q
    ||||||||||  ||||||||||||||||||||| ||||| |||||||         ||||| |||| ||| || |||| | ||||||| ||||||||||     
T  36016385 aatatgtattcgattttttattatattaaaataaacccgaaatactatttttttcaaagtgcgttagattttttttttcttctagatttttagaaataaa 36016286  T
Q  113 aaaaaagaatattgagggagtaaagtgtagattttaacataaga--nnnnnnnnatgtaattcaagcttctcttaggggaggagagtgaannnnnnncta 210  Q
    |||||   ||||||||| ||||||||||||||||||||||||||          |||||||||||||||||||||||||||| ||||| |       |||    
T  36016285 aaaaat--atattgaggaagtaaagtgtagattttaacataagaggagagaggaatgtaattcaagcttctcttaggggaggggagtggaaagttttcta 36016188  T
Q  211 acatgtttt-gaataagagggaagaagaatgtatattttaacttaaaaagagaggagagtgtaattc 276  Q
    | ||||||| ||||||||| ||||  || ||||||||||||| ||| ||| ||||| | ||||||||    
T  36016187 atatgttttagaataagagagaaggggagtgtatattttaacataagaagggaggaaaatgtaattc 36016121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 69 - 276
Target Start/End: Complemental strand, 31846687 - 31846479
Alignment:
Q  69 aagtgtgttaaattattattttt-tgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataagannnnnnnn--a 165  Q
    |||||||||| |||||||||||| ||||||| ||| ||||||  ||||||  |||||||||||||||| || |||||||||||||||||          |    
T  31846687 aagtgtgttagattattatttttctgctagactataagaaat--taaaaataaatattgagggagtaaggtatagattttaacataagagaagaggggaa 31846590  T
Q  166 tgtaattcaagcttctcttaggggaggagagtgaannnnnnnctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagagga 265  Q
    |||||||||||||||||||||||||||  ||||||       |||| |||||||||||||||||||||  || ||||||||||||| ||| | | ||||     
T  31846589 tgtaattcaagcttctcttaggggagggaagtgaaacattttctaatatgttttgaataagagggaaggggagtgtatattttaacataagaggggaggg 31846490  T
Q  266 gagtgtaattc 276  Q
     ||||||||||    
T  31846489 aagtgtaattc 31846479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 8 - 156
Target Start/End: Original strand, 44147402 - 44147553
Alignment:
Q  8 cgaagaatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnnaagtgtgttaaattattatt----ttttgctagattatt 103  Q
    |||| |||||||||| ||||||| ||||||||||||||||| ||||||||||         |||||||||| |||||||||    |||||||| ||||||    
T  44147402 cgaaaaatatgtattcaattttt-attatattaaaatagactcgcaatactatttttttcgaagtgtgttagattattattatttttttgctaaattatt 44147500  T
Q  104 agaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    | |||||| | ||||  ||||||||||||||||||||| ||||||||||||||    
T  44147501 aaaaataaaataaaaatatattgagggagtaaagtgtatattttaacataaga 44147553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 110 - 250
Target Start/End: Complemental strand, 10674482 - 10674340
Alignment:
Q  110 aataaaaaagaatattgagggagtaaagtgtagattttaacataagannnnnnnn--atgtaattcaagcttctcttaggggaggagagtgaannnnnnn 207  Q
    |||||| || ||||||||| |||||||||||||||||||||||||||          ||||||||||||||||||||| |||||||| |||||           
T  10674482 aataaataaaaatattgagagagtaaagtgtagattttaacataagaagggaggtgaatgtaattcaagcttctcttaagggaggagggtgaaaagtctt 10674383  T
Q  208 ctaacatgttttgaataagagggaagaagaatgtatattttaa 250  Q
    |||| |||||||||||||||||| |||||| ||||||||||||    
T  10674382 ctaatatgttttgaataagaggggagaagattgtatattttaa 10674340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 69 - 251
Target Start/End: Original strand, 17565176 - 17565358
Alignment:
Q  69 aagtgtgttaaattattattttttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga--nnnnnnnnat 166  Q
    |||||||||| |||||| |||||||||||||||||||||||  ||||||| |||||||||||  ||||| |||||||||||| |||||          ||    
T  17565176 aagtgtgttagattatttttttttgctagattattagaaat--taaaaaaaaatattgagggtctaaagcgtagattttaacttaagaggggaggaaaat 17565273  T
Q  167 gtaattcaagcttctcttaggggaggagagtgaannnnnnnctaacatgttttgaataagagggaagaagaatgtatattttaac 251  Q
    ||||||||||||||| | | | |||| |||||||       |||| |||||||||||||||||| ||| || |||||||||||||    
T  17565274 gtaattcaagcttctataaagagaggtgagtgaaatattttctaatatgttttgaataagaggggagaggagtgtatattttaac 17565358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 33 - 156
Target Start/End: Original strand, 30991272 - 30991393
Alignment:
Q  33 ttatattaaaatagacccgcaatactannnnnnnnn-aagtgtgttaaattattatttttt-gctagattattagaaataataaaaaagaatattgaggg 130  Q
    |||||||||||||||||||||||||||          |||||||||| ||||||||||||| ||||||||||||||||||| ||||     |||||||||    
T  30991272 ttatattaaaatagacccgcaatactatttgtcttcgaagtgtgttagattattatttttttgctagattattagaaataaaaaaat----tattgaggg 30991367  T
Q  131 agtaaagtgtagattttaacataaga 156  Q
    ||||||||||||||||||||||||||    
T  30991368 agtaaagtgtagattttaacataaga 30991393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 72 - 276
Target Start/End: Complemental strand, 41311908 - 41311702
Alignment:
Q  72 tgtgttaaattattatttttt-gctagattattagaaataataaaaaagaatattgagggagtaaagtgtag-attttaacataaga---nnnnnnnnat 166  Q
    ||||||| ||||||||||||| |||||||||||||||   |||||||| | ||||||||||||||||||||| || |||||||||||           ||    
T  41311908 tgtgttagattattatttttttgctagattattagaa---ataaaaaaaattattgagggagtaaagtgtagaatcttaacataagaggggagggggaat 41311812  T
Q  167 gtaattcaagcttctcttaggggaggagagtgaannnnnnnctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagaggag 266  Q
    |||||||| ||||||||||||||||| || ||||        ||| || ||||||||||||||| ||  |||||||||||||||| ||||| | ||| ||    
T  41311811 gtaattcatgcttctcttaggggaggggattgaatttttttttaatatattttgaataagaggggaggggaatgtatattttaacataaaaggggagtag 41311712  T
Q  267 agtgtaattc 276  Q
    ||||||||||    
T  41311711 agtgtaattc 41311702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 69 - 256
Target Start/End: Original strand, 24810097 - 24810281
Alignment:
Q  69 aagtgtgttaaattattatttttt-gctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataagannnnnnnn--a 165  Q
    |||||||||| ||| ||||||||| |||| |||||||||||||| ||||||      | |||||||||||||||| |||||||||||||          |    
T  24810097 aagtgtgttagatttttatttttttgctaaattattagaaataaaaaaaaa------ttagggagtaaagtgtagtttttaacataagaggggaggagaa 24810190  T
Q  166 tgtaattcaagcttctcttaggggaggagagtgaannnnnnnctaacatgttttgaataagagggaagaagaatgtatattttaacttaaa 256  Q
    ||||||||||||||||||||||||||| |||||||       |||| |||||||||||||||||| ||  ||| |||||||||||| ||||    
T  24810191 tgtaattcaagcttctcttaggggaggggagtgaaaaaatttctaatatgttttgaataagaggggaggggaacgtatattttaacataaa 24810281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 80 - 229
Target Start/End: Original strand, 41262611 - 41262762
Alignment:
Q  80 attattattttttgctagattattagaaataataaaaaagaa-tattgagggagtaaagtgtagattttaacataa---gannnnnnnnatgtaattcaa 175  Q
    ||||||||||||  ||||||||||||||||||||||||  || |||||| ||||||||||||||||||||||||||   |         |||||||||||    
T  41262611 attattattttt--ctagattattagaaataataaaaagtaaatattgatggagtaaagtgtagattttaacataaggggggagtaaaaatgtaattcaa 41262708  T
Q  176 gcttctcttaggggaggagagtgaannnnnnnctaacatgttttgaataagagg 229  Q
    ||||||||||||||||| |||||||       |||| |||||||||||||||||    
T  41262709 gcttctcttaggggaggggagtgaaaaaatttctaatatgttttgaataagagg 41262762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 88 - 276
Target Start/End: Original strand, 34679780 - 34679969
Alignment:
Q  88 tttttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga--nnnnnnnnatgtaattcaagcttctctta 185  Q
    |||| |||||||||||||||||||  ||||| | |||||||||| ||||| ||||||||||||||||||          ||||||||||||||||||| |    
T  34679780 ttttagctagattattagaaataaataaaaaaattattgagggactaaagcgtagattttaacataagaggggagggagatgtaattcaagcttctctca 34679879  T
Q  186 ggggaggagagtgaannnnnnnctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagaggagagtgtaattc 276  Q
     |||||  |||||||       |||| ||||||||||||||||||| ||| | ||||||||||||| ||  | | ||||||||||||||||    
T  34679880 agggagcggagtgaaatattttctaatatgttttgaataagagggaggaa-agtgtatattttaacatacgaggggaggagagtgtaattc 34679969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 69 - 156
Target Start/End: Complemental strand, 42861683 - 42861598
Alignment:
Q  69 aagtgtgttaaattattatttttt-gctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    ||||| |||| ||||||||||||| |||||||| |||||||||| ||||||   |||||||||||||||||||||||||||||||||||    
T  42861683 aagtgcgttagattattatttttttgctagatttttagaaataaaaaaaaa---tattgagggagtaaagtgtagattttaacataaga 42861598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 69 - 276
Target Start/End: Complemental strand, 4855500 - 4855290
Alignment:
Q  69 aagtgtgttaaattattatt--ttttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga--nnnnnnnn 164  Q
    |||||||||| |||||||||  ||||||||||||||||||||||| ||||||   |||||||| |||||||||||| |||||||||||||              
T  4855500 aagtgtgttagattattattatttttgctagattattagaaataaaaaaaaa---tattgaggtagtaaagtgtaggttttaacataagaggggaggaga 4855404  T
Q  165 atgtaattcaagc--ttctcttaggggaggagagtgaannnnnnnctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagaga 262  Q
    || ||||| ||||  |||||||||||||||||  ||||       |||| |||||||||||||||| | ||  || ||||||||||||| ||| ||||||    
T  4855403 atataatttaagcttttctcttaggggaggaggatgaaaagttttctaatatgttttgaataagagaggaggggattgtatattttaacataagaagaga 4855304  T
Q  263 ggagagtgtaattc 276  Q
    || |||| ||||||    
T  4855303 ggggagtataattc 4855290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 16 - 197
Target Start/End: Complemental strand, 11140390 - 11140205
Alignment:
Q  16 atgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnn---aagtgtgttaaattattatt-ttttgctagattattagaaataa 111  Q
    ||||||| |||||||||||||||||||||||||| |||||||||            |||||||||| | ||||||| |||| |||||||||||||| |||    
T  11140390 atgtattcaattttttattatattaaaatagacctgcaatactattttttttcccgaagtgtgttagactattattatttttctagattattagaattaa 11140291  T
Q  112 taaaaaagaatattgagggagtaaagtgtagattttaacataa--gannnnnnnnatgtaattcaagcttctcttaggggaggagagt 197  Q
     ||  ||  ||||||||||||||||||||||||||||||||||  |         |||||||||||||||||||||||||||| ||||    
T  11140290 aaagtaa--atattgagggagtaaagtgtagattttaacataaggggggaggggaatgtaattcaagcttctcttaggggaggggagt 11140205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 13 - 148
Target Start/End: Complemental strand, 13573477 - 13573344
Alignment:
Q  13 aatatgtatt-aaattttttattatattaaaatagacccgcaatactannnnnnnnnaagtgtgttaaattattatt--ttttgctagattattagaaat 109  Q
    |||||||||| ||||||||||||||||||||||||||||  ||||| |         |||||||||| |||||||||  |||||||| ||||||||||||    
T  13573477 aatatgtattcaaattttttattatattaaaatagacccataatacaatttttttcgaagtgtgttagattattattatttttgctaaattattagaaat 13573378  T
Q  110 aataaaaaagaatattgagggagtaaagtgtagatttta 148  Q
    || ||     |||||||||||||||||||||||||||||    
T  13573377 aacaa-----aatattgagggagtaaagtgtagatttta 13573344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 87 - 276
Target Start/End: Original strand, 32905183 - 32905372
Alignment:
Q  87 ttttttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataagannnnnnnn--atgtaattcaagcttctctt 184  Q
    ||||||||| |||||||| ||| || ||||||   |||||||||||||||| ||||||||||||| ||||          |||||||||||||||||||     
T  32905183 ttttttgcttgattattaaaaaaaaaaaaaaat--tattgagggagtaaagcgtagattttaacacaagaggggaggggaatgtaattcaagcttctctc 32905280  T
Q  185 aggggaggagagtgaannnnnnnctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagaggagagtgtaattc 276  Q
    | ||| || |||||||       |||| |||||||||||||||||| ||   | ||||||||||||| ||||||| ||||||||||||||||    
T  32905281 aagggtggggagtgaaatattttctaatatgttttgaataagaggggagggaagtgtatattttaacataaaaagggaggagagtgtaattc 32905372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 15 - 156
Target Start/End: Original strand, 37304677 - 37304816
Alignment:
Q  15 tatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnnaagtgtgttaaattattatt--ttttgctagattattagaaataat 112  Q
    |||||||| ||||||||||| |||||||||||||  |||||||||         |||| | ||| |||||||||  ||||||||||||||||| |||||     
T  37304677 tatgtattcaattttttattttattaaaatagacatgcaatactatttttgttgaagtctattagattattattatttttgctagattattagcaataaa 37304776  T
Q  113 aaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    ||||     |||||||||||||||||||||||||||||||||||    
T  37304777 aaaat----tattgagggagtaaagtgtagattttaacataaga 37304816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 80 - 200
Target Start/End: Complemental strand, 21304188 - 21304072
Alignment:
Q  80 attattattttttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacata--agannnnnnnnatgtaattcaagc 177  Q
    |||||||||||||| || |||||||||||||| |||      ||||||||||||||||||||||||||||||||  |||        |||||||||||||    
T  21304188 attattattttttggtaaattattagaaataaaaaa------tattgagggagtaaagtgtagattttaacataagagaggaggtgaatgtaattcaagc 21304095  T
Q  178 ttctcttaggggaggagagtgaa 200  Q
    |||||||| |||||| |||||||    
T  21304094 ttctcttaagggaggtgagtgaa 21304072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 69 - 255
Target Start/End: Complemental strand, 14093717 - 14093534
Alignment:
Q  69 aagtgtgttaaattattattttttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga--nnnnnnnnat 166  Q
    |||||||||| ||||| ||||||||||||||||||| |||||| |||      |||||||||| ||||||||||||||||||||||||          ||    
T  14093717 aagtgtgttagattataattttttgctagattattaaaaataaaaaatt----tattgagggattaaagtgtagattttaacataagaggggaggggaat 14093622  T
Q  167 gtaattcaagcttctcttaggggaggagagtgaannnnnnnctaacatgttttgaataagagggaagaagaatgtatattttaacttaa 255  Q
    ||||||||||||||||||| ||||||  | ||||       |||| || ||||||||||||||| ||  || |||||||||||||||||    
T  14093621 gtaattcaagcttctctta-gggagggaaatgaaatattttctaatatattttgaataagaggggaggggagtgtatattttaacttaa 14093534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 13 - 156
Target Start/End: Complemental strand, 33972596 - 33972453
Alignment:
Q  13 aatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnn-aagtgtgttaaattattattt-tttgctagattattagaaata 110  Q
    |||||||||| || |||| |||||||||||||||||| |||||||||          |||||||||| |||||||||  ||||| | |||||||||||||    
T  33972596 aatatgtattcaaattttgattatattaaaatagacctgcaatactatattttttcgaagtgtgttagattattattaatttgcaatattattagaaata 33972497  T
Q  111 ataaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    | ||| |   ||| ||||||||||||||||||||||||||||||||    
T  33972496 aaaaatat--ataatgagggagtaaagtgtagattttaacataaga 33972453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 69 - 251
Target Start/End: Original strand, 34364424 - 34364603
Alignment:
Q  69 aagtgtgttaaattattattttttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga--nnnnnnnnat 166  Q
    |||||||||| ||||||  ||||||||||||| |||||||||| |||||    |||||||||| ||||| |||||||||||| |||||          ||    
T  34364424 aagtgtgttagattatt--tttttgctagatttttagaaataaaaaaaac---tattgagggactaaagcgtagattttaacttaagaggggaggggaat 34364518  T
Q  167 gtaattcaagcttctcttaggggaggagagtgaannnnnnnctaacatgttttgaataagagggaagaagaatgtatattttaac 251  Q
    ||||||||||||||||| | |||||| || ||||       |||| |||||||||||||||||| || ||| |||||||||||||    
T  34364519 gtaattcaagcttctctcaagggaggggaatgaaatattttctaatatgttttgaataagaggggaggagagtgtatattttaac 34364603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 13 - 59
Target Start/End: Original strand, 25483051 - 25483097
Alignment:
Q  13 aatatgtattaaattttttattatattaaaatagacccgcaatacta 59  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||    
T  25483051 aatatgtattcaattttttattatattaaaatagacccgcaatacta 25483097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 165 - 276
Target Start/End: Complemental strand, 39998513 - 39998402
Alignment:
Q  165 atgtaattcaagcttctcttaggggaggagagtgaannnnnnnctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagagg 264  Q
    |||||||| |||||||||| | ||||||||||||||       |||| |||||||||||||||||| ||  || ||| ||||||||||||| | | ||||    
T  39998513 atgtaattgaagcttctctcaagggaggagagtgaaatattttctaatatgttttgaataagaggggaggggagtgtgtattttaacttaagaggggagg 39998414  T
Q  265 agagtgtaattc 276  Q
    ||||||||||||    
T  39998413 agagtgtaattc 39998402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 69 - 156
Target Start/End: Complemental strand, 40299154 - 40299071
Alignment:
Q  69 aagtgtgttaaattattattttttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    |||||||||| |||||| |||||||||||||||||||||   |||||||| ||| |||||||| ||||| |||||||||||| |||||    
T  40299154 aagtgtgttagattatt-ttttttgctagattattagaa---ataaaaaaaaatgttgagggactaaagcgtagattttaacttaaga 40299071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 88 - 156
Target Start/End: Complemental strand, 30354064 - 30353998
Alignment:
Q  88 tttttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    |||||||||||||||||||| ||| |||||||  |||||||||||||||||||||||||||| ||||||    
T  30354064 tttttgctagattattagaagtaa-aaaaaagt-tattgagggagtaaagtgtagattttaatataaga 30353998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 8 - 103
Target Start/End: Complemental strand, 43776590 - 43776495
Alignment:
Q  8 cgaagaatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnnaagtgtgttaaattattattttttgctagattatt 103  Q
    |||| |||||||||| ||||||||||||||||||| |||||| |||||||||         |||||||||| |||||||||| || ||||||||||    
T  43776590 cgaaaaatatgtattcaattttttattatattaaactagacctgcaatactatttttttccaagtgtgttagattattatttatttctagattatt 43776495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 59
Target Start/End: Original strand, 41262516 - 41262567
Alignment:
Q  8 cgaagaatatgtattaaattttttattatattaaaatagacccgcaatacta 59  Q
    |||| |||||||||| ||||||||||||||||||||||||||||| ||||||    
T  41262516 cgaaaaatatgtattcaattttttattatattaaaatagacccgcgatacta 41262567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 13 - 90
Target Start/End: Complemental strand, 17734536 - 17734459
Alignment:
Q  13 aatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnnaagtgtgttaaattattatttt 90  Q
    |||||||||| ||||||||||||||||||||||||||||||| || |         ||||||||||||||||||||||    
T  17734536 aatatgtattcaattttttattatattaaaatagacccgcaagacaatctttttcgaagtgtgttaaattattatttt 17734459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 89 - 156
Target Start/End: Complemental strand, 44283910 - 44283847
Alignment:
Q  89 ttttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    ||||||||||||||||||||||| ||||| |    |||||||||||||| ||||||||||||||||||    
T  44283910 ttttgctagattattagaaataaaaaaaatg----ttgagggagtaaagcgtagattttaacataaga 44283847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 57
Target Start/End: Complemental strand, 10674562 - 10674513
Alignment:
Q  8 cgaagaatatgtattaaattttttattatattaaaatagacccgcaatac 57  Q
    |||| |||||||||| |||||||||||||||||||||||||||| |||||    
T  10674562 cgaaaaatatgtattcaattttttattatattaaaatagacccgtaatac 10674513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 69 - 156
Target Start/End: Original strand, 32904046 - 32904136
Alignment:
Q  69 aagtgtgttaaattattattttttgctagattattagaaat---aataaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    |||||||||  |||| | |||||||||||||||||||||||   || |||||| ||||| |||||| ||||| ||||||||||||| ||||    
T  32904046 aagtgtgtttcattagttttttttgctagattattagaaataaaaaaaaaaaacaatatcgagggattaaagcgtagattttaacacaaga 32904136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 113 - 156
Target Start/End: Complemental strand, 33969189 - 33969146
Alignment:
Q  113 aaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    |||||| || ||||||||||||||||||||||||||||||||||    
T  33969189 aaaaaaaaaaattgagggagtaaagtgtagattttaacataaga 33969146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 276
Target Start/End: Complemental strand, 3075275 - 3075164
Alignment:
Q  165 atgtaattcaagcttctcttaggggaggagagtgaannnnnnnctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagagg 264  Q
    |||||||||||||||||||||||||||| |||||||       | || | |||||||||||||||  ||  |||||||||||||||| ||| | | ||||    
T  3075275 atgtaattcaagcttctcttaggggaggggagtgaaaaaaattcaaataagttttgaataagaggataggggaatgtatattttaacataagaggggagg 3075176  T
Q  265 agagtgtaattc 276  Q
      ||||||||||    
T  3075175 gtagtgtaattc 3075164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 114 - 156
Target Start/End: Complemental strand, 15848052 - 15848010
Alignment:
Q  114 aaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    ||||| |||||||||||||||||||||| ||||||||||||||    
T  15848052 aaaaaaaatattgagggagtaaagtgtaaattttaacataaga 15848010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 8 - 49
Target Start/End: Complemental strand, 4855565 - 4855524
Alignment:
Q  8 cgaagaatatgtattaaattttttattatattaaaatagacc 49  Q
    |||| |||||||||| ||||||||||||||||||||||||||    
T  4855565 cgaaaaatatgtattcaattttttattatattaaaatagacc 4855524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 89 - 251
Target Start/End: Complemental strand, 8438115 - 8437954
Alignment:
Q  89 ttttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataagannnnnnnn--atgtaattcaagcttctcttag 186  Q
    |||||||||||||||||||||||  ||||||  ||||| ||||||||||||||| |||| || |||||          ||||||||||||||||| |||     
T  8438115 ttttgctagattattagaaataa--aaaaagt-tattgtgggagtaaagtgtaggttttgacttaagaggggaggggaatgtaattcaagcttctattaa 8438019  T
Q  187 gggaggagagtgaannnnnnnctaacatgttttgaataagagggaagaagaatgtatattttaac 251  Q
    |||||| |||||||       |||| ||||||||||||| |||| ||  || |||||||||||||    
T  8438018 gggaggggagtgaaatatttcctaatatgttttgaataaaaggggaggggagtgtatattttaac 8437954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 111 - 156
Target Start/End: Complemental strand, 25597869 - 25597824
Alignment:
Q  111 ataaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    |||||||| |||||||||||||||||||||| |||||||| |||||    
T  25597869 ataaaaaaaaatattgagggagtaaagtgtatattttaacttaaga 25597824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 69 - 156
Target Start/End: Original strand, 37837416 - 37837499
Alignment:
Q  69 aagtgtgttaaattattattttttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    |||||||||| ||||||  | |||||||| |||||||||| || ||||||  |||||||| || ||||| ||||||||||||||||||    
T  37837416 aagtgtgttagattatt--tgtttgctagtttattagaaacaaaaaaaaa--atattgagagactaaagcgtagattttaacataaga 37837499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 251
Target Start/End: Original strand, 13439995 - 13440156
Alignment:
Q  90 tttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacata--agannnnnnnnatgtaattcaagcttctcttagg 187  Q
    |||||||||||||| ||||||| ||||||   |||||||||| ||||| |||||||||||| ||  |||        ||||||||||| ||||||| | |    
T  13439995 tttgctagattattggaaataaaaaaaaat--tattgagggattaaagcgtagattttaacttaagagatgagggaaatgtaattcaatcttctctcaag 13440092  T
Q  188 ggaggagagtgaannnnnnnctaacatgttttgaataagagggaagaagaatgtatattttaac 251  Q
    ||||| |||||||       |||| || ||||||||||||||| |  ||| |||||||||||||    
T  13440093 ggaggggagtgaaatattttctaatatattttgaataagaggggatgagagtgtatattttaac 13440156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 109 - 156
Target Start/End: Complemental strand, 10215550 - 10215503
Alignment:
Q  109 taataaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    ||||| |||| |||||||||||||||||||||| |||||||| |||||    
T  10215550 taatataaaaaaatattgagggagtaaagtgtatattttaacttaaga 10215503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 110 - 275
Target Start/End: Original strand, 13421943 - 13422110
Alignment:
Q  110 aataaaaaagaatattgagggagtaaagtgtagattttaacata--agannnnnnnnatgtaattcaagcttctcttaggggaggagagtgaannnnnnn 207  Q
    ||||||||| |||||||||||| ||||| |||||||||||| ||  |||        ||||||||||| ||||||| |  ||||| |||||||           
T  13421943 aataaaaaaaaatattgagggactaaagcgtagattttaacttaagagatgagggaaatgtaattcaatcttctctcaaaggaggggagtgaaatatttt 13422042  T
Q  208 ctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagaggagagtgtaatt 275  Q
    |||| |||||||||||||||| | ||  || ||||||||||||| ||| | | |||| ||||||||||    
T  13422043 ctaatatgttttgaataagagaggaggggagtgtatattttaacataagaggggaggggagtgtaatt 13422110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 69 - 150
Target Start/End: Original strand, 14880028 - 14880105
Alignment:
Q  69 aagtgtgttaaattattattttttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaac 150  Q
    |||||||||| ||||||  ||||||||||||| |||||||||  |||||| | |||||| ||| ||||| ||||||||||||    
T  14880028 aagtgtgttagattatt--tttttgctagatttttagaaata--aaaaaaaactattgaaggactaaagcgtagattttaac 14880105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 213 - 276
Target Start/End: Complemental strand, 24778083 - 24778020
Alignment:
Q  213 atgttttgaataagagggaagaagaatgtatattttaacttaaaaagagaggagagtgtaattc 276  Q
    |||||||||||||||||| |||  | ||||||||||||| ||| | | ||||||||||||||||    
T  24778083 atgttttgaataagagggtagagaagtgtatattttaacataagaggggaggagagtgtaattc 24778020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 121 - 156
Target Start/End: Complemental strand, 34924990 - 34924955
Alignment:
Q  121 atattgagggagtaaagtgtagattttaacataaga 156  Q
    |||||||| |||||||||||||||||||||||||||    
T  34924990 atattgagcgagtaaagtgtagattttaacataaga 34924955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 276
Target Start/End: Complemental strand, 6099432 - 6099370
Alignment:
Q  214 tgttttgaataagagggaagaagaatgtatattttaacttaaaaagagaggagagtgtaattc 276  Q
    ||||||||||||||||| || | | ||||||||||||| ||||| ||||||  ||||||||||    
T  6099432 tgttttgaataagaggggaggaaagtgtatattttaacataaaaggagagggaagtgtaattc 6099370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 156
Target Start/End: Complemental strand, 8297192 - 8297150
Alignment:
Q  114 aaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    ||||| |||||||||||||||||||||| |||||||| |||||    
T  8297192 aaaaaaaatattgagggagtaaagtgtatattttaacttaaga 8297150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 276
Target Start/End: Complemental strand, 11759531 - 11759420
Alignment:
Q  165 atgtaattcaagcttctcttaggggaggagagtgaannnnnnnctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagagg 264  Q
    ||||||||||||||||| | | |||||| |||||||       |||| |||||||||||||||||| || | | ||||||||||||| |||   | ||||    
T  11759531 atgtaattcaagcttctttcaagggaggggagtgaaatattttctaatatgttttgaataagaggggaggaaagtgtatattttaacataagtggggagg 11759432  T
Q  265 agagtgtaattc 276  Q
     |||||||||||    
T  11759431 ggagtgtaattc 11759420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 156
Target Start/End: Original strand, 22935955 - 22936000
Alignment:
Q  111 ataaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    |||||||| |||||||||| ||||||||||| |||||||| |||||    
T  22935955 ataaaaaaaaatattgaggcagtaaagtgtatattttaacttaaga 22936000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 156
Target Start/End: Original strand, 25953994 - 25954026
Alignment:
Q  124 ttgagggagtaaagtgtagattttaacataaga 156  Q
    |||||||||||||| ||||||||||||||||||    
T  25953994 ttgagggagtaaagcgtagattttaacataaga 25954026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 129; Significance: 9e-67; HSPs: 60)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 8 - 276
Target Start/End: Original strand, 38011627 - 38011898
Alignment:
Q  8 cgaagaatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnnaagtgtgttaaattattatttt-ttgctagattattaga 106  Q
    |||| |||||||||| ||||||||||||||||||||||||||||||||||||         |||||||||||||||||||||| ||||||||||||||||    
T  38011627 cgaaaaatatgtattcaattttttattatattaaaatagacccgcaatactatttttttttaagtgtgttaaattattatttttttgctagattattaga 38011726  T
Q  107 aataataaaaaagaatattgagggagtaaagtgtagattttaacataaga--nnnnnnnnatgtaattcaagcttctcttaggggaggagagtgaannnn 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||| |||||||        
T  38011727 aataataaaaaagaatattgagggagtaaagtgtagattttaacataagaggggaggggaatgtaattcaagcttctcttaggggaggggagtgaaattt 38011826  T
Q  205 nnnctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagaggagagtgtaattc 276  Q
       |||| |||||||||||||||||| ||  || ||||||||||||||||| |   |||| |||||||||||    
T  38011827 tttctaatatgttttgaataagaggggaggggagtgtatattttaacttaagagtggaggggagtgtaattc 38011898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 8 - 276
Target Start/End: Complemental strand, 1846159 - 1845889
Alignment:
Q  8 cgaagaatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnnaagtgtgttaaattattattttttgctagattattagaa 107  Q
    |||| |||||||||| |||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||    
T  1846159 cgaaaaatatgtattcaattttttattatattaaaatagacccgcaatactctttttttttaagtgtgttaaattattattttttgctagattattagaa 1846060  T
Q  108 ataataaaaaagaatattgagggagtaaagtgtagattttaacataaga--nnnnnnnnatgtaattcaagcttctcttaggggaggagagtgaannnnn 205  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||          ||||||||||||||||| ||||||||||  ||||||         
T  1846059 ataataaaaaagaatattgagggagtaaagtgtagattttaacataagaggggagggggatgtaattcaagcttcttttaggggagggtagtgaaatttt 1845960  T
Q  206 nnctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagaggagagtgtaattc 276  Q
      |||| |||||||||||||||||| ||  || ||||| ||||||||||| | | |||| |||||||||||    
T  1845959 ttctaatatgttttgaataagaggggaggggagtgtatgttttaacttaagaggggaggggagtgtaattc 1845889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 27 - 276
Target Start/End: Complemental strand, 41321793 - 41321542
Alignment:
Q  27 tttttattatattaaaatagacccgcaatactannnnnnnnnaagtgtgttaaattattattttttgctagattattagaaataataaaaaagaatattg 126  Q
    |||||||||||||||||||||||| ||||||||         ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41321793 tttttattatattaaaatagacccacaatactatttttttttaagtgtgttaaattattattttttgctagattattagaaataataaaaaagaatattg 41321694  T
Q  127 agggagtaaagtgtagattttaacataaga--nnnnnnnnatgtaattcaagcttctcttaggggaggagagtgaannnnnnnctaacatgttttgaata 224  Q
    | |||||||| |||||||||||||||||||          |||||||||||||||||||||||||||| |||||||       |||| ||||||||||||    
T  41321693 acggagtaaattgtagattttaacataagaggggagggggatgtaattcaagcttctcttaggggaggggagtgaaattttttctaatatgttttgaata 41321594  T
Q  225 agagggaagaagaatgtatattttaacttaaaaagagaggagagtgtaattc 276  Q
    |||||| ||  || ||||||||||||||||| | | ||||||||||||||||    
T  41321593 agaggggaggggagtgtatattttaacttaagaggggaggagagtgtaattc 41321542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 8 - 255
Target Start/End: Original strand, 25068781 - 25069030
Alignment:
Q  8 cgaagaatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnnaagtgtgttaaattattatttt-ttgctagattattaga 106  Q
    |||| |||||||||| ||||||||||||||||||||||||||||||||||||         |||||||||||||||||||||| ||||||||||||||||    
T  25068781 cgaaaaatatgtattcaattttttattatattaaaatagacccgcaatactattttttct-aagtgtgttaaattattatttttttgctagattattaga 25068879  T
Q  107 aataataaaaaagaatattgagggagtaaagtgtagattttaacataaga--nnnnnnnnatgtaattcaagcttctcttaggggaggagagtgaannnn 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||| |||||||        
T  25068880 aataataaaaaagaatattgagggagtaaagtgtagattttaacataagaggggaggggaatgtaattcaagcttctcttaggggaggggagtgaaattt 25068979  T
Q  205 nnnctaacatgttttgaataagagggaagaagaatgtatattttaacttaa 255  Q
       |||| ||||||||||||||| || ||   | |||||||||||||||||    
T  25068980 tttctaatatgttttgaataagatgggagggaagtgtatattttaacttaa 25069030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 8 - 230
Target Start/End: Original strand, 1386422 - 1386645
Alignment:
Q  8 cgaagaatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnnaagtgtgttaaattattattttttgctagattattagaa 107  Q
    |||| |||||||||| |||||||||||||||||||||||||||| |||||||         ||||||||||||||||||||||||||| |||||||||||    
T  1386422 cgaaaaatatgtattcaattttttattatattaaaatagacccgtaatactatttttttt-aagtgtgttaaattattattttttgcttgattattagaa 1386520  T
Q  108 ataataaaaaagaatattgagggagtaaagtgtagattttaacata--agannnnnnnnatgtaattcaagcttctcttaggggaggagagtgaannnnn 205  Q
    ||||||||||| ||||||||||||||||| ||||||||||||||||  |||        ||||||||||||||| |||||||||||| |||||||         
T  1386521 ataataaaaaaaaatattgagggagtaaaatgtagattttaacataagagaggagggggatgtaattcaagcttttcttaggggaggggagtgaatattt 1386620  T
Q  206 nnctaacatgttttgaataagaggg 230  Q
      |||| ||||||||||||||||||    
T  1386621 ttctaatatgttttgaataagaggg 1386645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 13 - 156
Target Start/End: Complemental strand, 52505587 - 52505445
Alignment:
Q  13 aatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnnaagtgtgttaaattattattttttgctagattattagaaataat 112  Q
    |||||||||| ||||||||||||||||||||||||||||||||| ||         ||||||||||||||||||||||||||||||||| ||||||||||    
T  52505587 aatatgtattcaattttttattatattaaaatagacccgcaataatatttttttt-aagtgtgttaaattattattttttgctagattaatagaaataat 52505489  T
Q  113 aaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  52505488 aaaaaagaatattgagggagtaaagtgtagattttaacataaga 52505445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 13 - 276
Target Start/End: Complemental strand, 8061321 - 8061055
Alignment:
Q  13 aatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnn--aagtgtgttaaattattattttttgctagattattagaaata 110  Q
    |||||||||| || |||||||||||||||||||||||||||||||||           ||||||||||| ||  ||||||||||||||||||||||||||    
T  8061321 aatatgtattcaaatttttattatattaaaatagacccgcaatactatttttttttcaaagtgtgttaattttatattttttgctagattattagaaata 8061222  T
Q  111 ataaaaaagaatattgagggagtaaagtgtagattttaacataaga--nnnnnnnnatgtaattcaagcttctcttaggggaggagagtgaannnnnnnc 208  Q
    | |||||| | |||||||||||||||||||||||||||||||||||          ||||||||||||||||||||| |||||| |||||||       |    
T  8061221 aaaaaaaata-tattgagggagtaaagtgtagattttaacataagaatggagggaaatgtaattcaagcttctcttacgggaggggagtgaaaagttttc 8061123  T
Q  209 taacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagaggagagtgtaattc 276  Q
    ||| |||||||||||||||||||||  || ||||||||||||| ||| |   ||||||||||||||||    
T  8061122 taatatgttttgaataagagggaaggggagtgtatattttaacataagagaggaggagagtgtaattc 8061055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 8 - 230
Target Start/End: Original strand, 25991194 - 25991416
Alignment:
Q  8 cgaagaatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnnaagtgtgttaaattattatt-ttttgctagattattaga 106  Q
    |||| |||||||||| ||||||||||||||||||||||||||||||||||||         |||||||||| ||||||||| |||| ||||||| |||||    
T  25991194 cgaaaaatatgtatttaattttttattatattaaaatagacccgcaatactatttttttaaaagtgtgttagattattattatttttctagattgttaga 25991293  T
Q  107 aataataaaaaagaatattgagggagtaaagtgtagattttaacataa-gannnnnnnnatgtaattcaagcttctcttaggggaggagagtgaannnnn 205  Q
    ||||| ||| |   |||||||||||||||||||||||||||||||||| ||        ||||||||||||||||||||||||||||||||||||         
T  25991294 aataaaaaatat--atattgagggagtaaagtgtagattttaacataaggaggaggagaatgtaattcaagcttctcttaggggaggagagtgaaatttt 25991391  T
Q  206 nnctaacatgttttgaataagaggg 230  Q
      |||| ||||||||||||||||||    
T  25991392 ttctaatatgttttgaataagaggg 25991416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 8 - 275
Target Start/End: Complemental strand, 19997902 - 19997634
Alignment:
Q  8 cgaagaatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnnaagtgtgttaaattattattttttgctagattattagaa 107  Q
    |||| |||||||||| || |||| ||||||||||||||||  ||||||||||         |||||| ||| ||||||||||||||||||| ||||||||    
T  19997902 cgaaaaatatgtattcaaattttgattatattaaaatagatacgcaatactatttttttcgaagtgtattagattattattttttgctagactattagaa 19997803  T
Q  108 ataataaaaaagaatattgagggagtaaagtgtagattttaacataaga--nnnnnnnnatgtaattcaagcttctcttaggggaggagagtgaannnnn 205  Q
    |||| | |||| | ||||||||||||||| |||||||||||||||||||          |||||||||| |||||||||||||||||||||||||         
T  19997802 ataaaataaaa-agtattgagggagtaaaatgtagattttaacataagaggggaggagaatgtaattcaggcttctcttaggggaggagagtgaaatatt 19997704  T
Q  206 nnctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagaggagagtgtaatt 275  Q
      |||| |||||||||||||||||| |||| | ||||||||||||| ||| | | ||||||| |||||||    
T  19997703 ttctaatatgttttgaataagaggggagaaaagtgtatattttaacataagaggggaggagaatgtaatt 19997634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 8 - 257
Target Start/End: Original strand, 31765779 - 31766028
Alignment:
Q  8 cgaagaatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnnaagtgtgttaaattattatt-ttttgctagattattaga 106  Q
    |||| |||||||||| ||||||||||||||||||||||| || |||||||||         |||||||||| ||||||||| |||| |||||||||||||    
T  31765779 cgaaaaatatgtattcaattttttattatattaaaataggcctgcaatactatttttttcgaagtgtgttagattattattatttttctagattattaga 31765878  T
Q  107 aataataaaaaagaatattgagggagtaaagtgtagattttaacataaga-nnnnnnnnatgtaattcaagcttctcttaggggaggagagtgaannnnn 205  Q
    |||||  |||   |||||||||||||||||||||||||||||||||||||         |||||||||||||||||||||||| ||  |||||||         
T  31765879 aataa--aaagttaatattgagggagtaaagtgtagattttaacataagagggagggtaatgtaattcaagcttctcttagggaagtggagtgaaaaatt 31765976  T
Q  206 nnctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaa 257  Q
      |||| |||||||||||||||||| ||  || ||||||||||||| |||||    
T  31765977 ttctaatatgttttgaataagaggggaggggagtgtatattttaacataaaa 31766028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 13 - 276
Target Start/End: Original strand, 18406983 - 18407246
Alignment:
Q  13 aatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnnaagtgtgttaaattattatt-ttttgctagattattagaaataa 111  Q
    |||||||||| ||||||||||| |||||||||||||| | |||||||         |||||||||| ||||||||| |||| |||||| ||| |||||||    
T  18406983 aatatgtatttaattttttattctattaaaatagacctgtaatactattttttcg-aagtgtgttagattattattatttttctagatgatttgaaataa 18407081  T
Q  112 taaaaaagaatattgagggagtaaagtgtagattttaacataagannnnnnnn--atgtaattcaagcttctcttaggggaggagagtgaannnnnnnct 209  Q
     ||| ||  ||||||| | |||||||||||||||||||||||||           |||||||||||||||||||||||||||| |||||||       ||    
T  18407082 aaaataa--atattgaagaagtaaagtgtagattttaacataaggggggaggggaatgtaattcaagcttctcttaggggaggggagtgaaaagttttct 18407179  T
Q  210 aacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagaggagagtgtaattc 276  Q
    || |||||||||||||||||| ||  |||||||||||||||| ||| | | ||||||||||||||||    
T  18407180 aatatgttttgaataagaggggaggggaatgtatattttaacataagaggggaggagagtgtaattc 18407246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 13 - 276
Target Start/End: Complemental strand, 49129300 - 49129034
Alignment:
Q  13 aatatgtattaaattttttattatattaaaatagacccgcaatact--annnnnnnnnaagtgtgttaaattattattttttgctagattattagaaata 110  Q
    |||| ||||| || |||| |||||||||||||||||||||||||||            |||||||||| |||  |||||||| ||||||||||||||||     
T  49129300 aatacgtattcaaattttgattatattaaaatagacccgcaatacttacttttttctgaagtgtgttagatttatatttttttctagattattagaaat- 49129202  T
Q  111 ataaaaaagaatattgagggagtaaagtgtagattttaacataaga---nnnnnnnnatgtaattcaagcttctcttaggggaggagagtgaannnnnnn 207  Q
     ||||||| |||||| |||| |||||||||||||||||||||||||           |||||| |||||||||||| |||||| | |||||||           
T  49129201 -taaaaaaaaatattaagggtgtaaagtgtagattttaacataagagggggaggggaatgtaactcaagcttctctcaggggatgtgagtgaaaaaaatt 49129103  T
Q  208 ctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagaggagagtgtaattc 276  Q
    |||| |||||||||||||||||||||| || ||||||||||||| ||| ||| || |||||||||||||    
T  49129102 ctaaaatgttttgaataagagggaagaggagtgtatattttaacataagaagggatgagagtgtaattc 49129034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 8 - 273
Target Start/End: Complemental strand, 47553435 - 47553169
Alignment:
Q  8 cgaagaatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnn--aagtgtgttaaattattatttttt-gctagattatta 104  Q
    |||| |||||||||| || |||| ||||||||||||||||||||||||| ||           |||||||||| ||||||||||||| ||||||||||||    
T  47553435 cgaaaaatatgtattcaaattttgattatattaaaatagacccgcaatattattttttttctgaagtgtgttagattattatttttttgctagattatta 47553336  T
Q  105 gaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga--nnnnnnnnatgtaattcaagcttctcttaggggaggagagtgaann 202  Q
    ||||||| ||||     |||||||||| ||||||||||||||||||||||||          ||||||||||| ||||||||| |||||  |||||||      
T  47553335 gaaataaaaaaat----tattgagggattaaagtgtagattttaacataagaggggagaggaatgtaattcaaacttctcttaagggagatgagtgaaat 47553240  T
Q  203 nnnnnctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagaggagagtgtaa 273  Q
         |||| || ||||||||||||||| ||  |||||||||||||||| ||| | | |||||||||||||    
T  47553239 attttctaatatattttgaataagaggggaggggaatgtatattttaacataagaggggaggagagtgtaa 47553169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 69 - 276
Target Start/End: Complemental strand, 43320151 - 43319945
Alignment:
Q  69 aagtgtgttaaattattattttttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga--nnnnnnnnat 166  Q
    |||||||||| |||||| ||||||||||||||||||||||||  |||||| |||||||||||| ||| | |||||||||||| |||||          ||    
T  43320151 aagtgtgttatattatt-ttttttgctagattattagaaata--aaaaaaaaatattgagggactaatgcgtagattttaacttaagatgggaggggaat 43320055  T
Q  167 gtaattcaagcttctcttaggggaggagagtgaannnnnnnctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagaggag 266  Q
    ||||||||||||||||| | |||||  |||||||       |||| ||||||||| |||||||| ||  |||||||||||||||| ||||| |||||| |    
T  43320054 gtaattcaagcttctctcaagggagaggagtgaaatattttctaatatgttttgattaagaggggaggggaatgtatattttaacataaaaggagagggg 43319955  T
Q  267 agtgtaattc 276  Q
    ||||||||||    
T  43319954 agtgtaattc 43319945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 69 - 276
Target Start/End: Original strand, 16536858 - 16537065
Alignment:
Q  69 aagtgtgttaaattattattttttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga--nnnnnnnnat 166  Q
    |||||||||||| |||| ||||||||||||||||||||| ||| |||||| |||||||||||||||||| ||||||||||||||||||          ||    
T  16536858 aagtgtgttaaactatt-ttttttgctagattattagaagtaaaaaaaaa-aatattgagggagtaaagagtagattttaacataagaggggaggggaat 16536955  T
Q  167 gtaattcaagcttctcttaggggaggagagtgaannnnnnnctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagaggag 266  Q
    ||||||||||||||||| | |||||| |||||||        ||| |||||||||||||||||| || | | ||||||||||||| ||| | | ||||      
T  16536956 gtaattcaagcttctctcaagggaggggagtgaaatattttttaaaatgttttgaataagaggggaggaaagtgtatattttaacataagaggggaggga 16537055  T
Q  267 agtgtaattc 276  Q
    ||||||||||    
T  16537056 agtgtaattc 16537065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 87 - 276
Target Start/End: Original strand, 51362347 - 51362531
Alignment:
Q  87 ttttttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataagannnnnnnnatgtaattcaagcttctcttag 186  Q
    ||||||||||||||||||||||||  |||||| | |||||||||||||||| ||||||||||||| ||||        ||||||||||||||||||| |     
T  51362347 ttttttgctagattattagaaata--aaaaaaaattattgagggagtaaagcgtagattttaacacaaga---ggggaatgtaattcaagcttctctcaa 51362441  T
Q  187 gggaggagagtgaannnnnnnctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagaggagagtgtaattc 276  Q
    |||||| |||||||        ||| |||||||||||||||||| ||  || ||||||||||||| ||||| | ||||| ||||||||||    
T  51362442 gggaggtgagtgaaatattttttaatatgttttgaataagaggggaggggagtgtatattttaacataaaaggggaggaaagtgtaattc 51362531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 8 - 276
Target Start/End: Original strand, 28044924 - 28045189
Alignment:
Q  8 cgaagaatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnnaagtgtgttaaattattatt--ttttgctagattattag 105  Q
    |||| |||| ||||| |||||||||||||||||||||||||||| ||||| |         |||| ||||| |||||||||  |||||||||||||||||    
T  28044924 cgaaaaatacgtattcaattttttattatattaaaatagacccgtaatacaatttttatcgaagtatgttagattattattatttttgctagattattag 28045023  T
Q  106 aaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga--nnnnnnnnatgtaattcaagcttctcttaggggaggagagtgaannn 203  Q
    |||||| |||      |||||||||||||||||||||||||||| ||||||          |||||||||||||||||||||||||| ||| |||||       
T  28045024 aaataaaaaa------tattgagggagtaaagtgtagattttaatataagaggggaggagaatgtaattcaagcttctcttagggga-gagggtgaaaag 28045116  T
Q  204 nnnnctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagaggagagtgtaattc 276  Q
        |||| || |||||| |||||||||||   | ||||||||||||| ||| | ||||||  ||||||||||    
T  28045117 ttttctaatatcttttgagtaagagggaagggaattgtatattttaacataagaggagagggtagtgtaattc 28045189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 69 - 156
Target Start/End: Complemental strand, 38294355 - 38294268
Alignment:
Q  69 aagtgtgttaaattattatttttt--gctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    |||||||||| |||||||||||||  ||||||||||||||||||| ||||||  ||||||||||||||||||||||||||||||||||||    
T  38294355 aagtgtgttagattattattttttttgctagattattagaaataaaaaaaaa--atattgagggagtaaagtgtagattttaacataaga 38294268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 8 - 156
Target Start/End: Complemental strand, 15357232 - 15357085
Alignment:
Q  8 cgaagaatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnn-aagtgtgttaaattattatt--ttttgctagattatta 104  Q
    |||| |||||||||| |||||||||||||||||||||||||||| ||||| |          |||||||||| |||||||||  |||| ||| |||||||    
T  15357232 cgaaaaatatgtatttaattttttattatattaaaatagacccgtaatacaattttttttcgaagtgtgttagattattattattttttctaaattatta 15357133  T
Q  105 gaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    ||||||| ||||||    ||||||||||||||||||||||||||||||||||    
T  15357132 gaaataaaaaaaaa----attgagggagtaaagtgtagattttaacataaga 15357085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 69 - 156
Target Start/End: Original strand, 18572406 - 18572491
Alignment:
Q  69 aagtgtgttaaattattattttttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    |||||||||| ||||||||||||||||||||||||| |||||  |||||  | |||||||||||||||||||||||||||||||||||    
T  18572406 aagtgtgttagattattattttttgctagattattataaata--aaaaacaattattgagggagtaaagtgtagattttaacataaga 18572491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 69 - 156
Target Start/End: Complemental strand, 33126422 - 33126336
Alignment:
Q  69 aagtgtgttaaattattattttttg-ctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    |||||||||| |||||||||||||  |||||||||||||||||| ||||||  ||||||||||||||||| ||||||||||||||||||    
T  33126422 aagtgtgttagattattatttttttactagattattagaaataaaaaaaaa--atattgagggagtaaagcgtagattttaacataaga 33126336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 16 - 249
Target Start/End: Original strand, 45737760 - 45737993
Alignment:
Q  16 atgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnn-aagtgtgttaaattattatt-ttttgctagattattagaaataata 113  Q
    ||||||| |||||||||||||||||||||||||  |||||||||          |||||||||| | ||||||| |||| ||||||||||||||||||      
T  45737760 atgtattcaattttttattatattaaaatagacatgcaatactattttttcccgaagtgtgttagactattattatttttctagattattagaaataaag 45737859  T
Q  114 aaaaagaatattgagggagtaaagtgtagattttaacataagannnnnnnn--atgtaattcaagcttctcttaggggaggagagtgaannnnnnnctaa 211  Q
     ||     ||||||||||||||||||||||||||||||||||           |||||||||||||||||||||||||||| |||||||       ||||    
T  45737860 taat----tattgagggagtaaagtgtagattttaacataaggggggaggggaatgtaattcaagcttctcttaggggaggggagtgaaaaattttctaa 45737955  T
Q  212 catgttttgaataagagggaagaagaatgtatatttta 249  Q
     ||||||||||||||||||||   || |||||||||||    
T  45737956 tatgttttgaataagagggaaagggagtgtatatttta 45737993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 79 - 264
Target Start/End: Complemental strand, 20585213 - 20585027
Alignment:
Q  79 aattattattttttgctagattattagaaataataaaaaaga-atattgagggagtaaagtgtagattttaacataaga--nnnnnnnnatgtaattcaa 175  Q
    |||||||||||||  |||||||||||||||||  |||||| | ||||||||||||||||||||||||||||||||||||          |||||||||||    
T  20585213 aattattattttta-ctagattattagaaatataaaaaaaaatatattgagggagtaaagtgtagattttaacataagaggggaggagaatgtaattcaa 20585115  T
Q  176 gcttctcttaggggaggagagtgaannnnnnnctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagagg 264  Q
    |||||||||| | |||| | |||||       |||| |||||||||||||||| ||||| || ||||||||||||| ||| ||| ||||    
T  20585114 gcttctcttaagcgagg-gggtgaaaaattttctaatatgttttgaataagagagaagaggattgtatattttaacataagaagggagg 20585027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 95 - 276
Target Start/End: Original strand, 27226189 - 27226370
Alignment:
Q  95 tagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga--nnnnnnnnatgtaattcaagcttctcttaggggagg 192  Q
    ||||||||||||||||| ||||||  ||||||||| ||||||||||||||||||||||||||          |||| |||||||||||||| | ||||||    
T  27226189 tagattattagaaataaaaaaaaa--atattgaggaagtaaagtgtagattttaacataagaggggaggtgaatgtcattcaagcttctctcaagggagg 27226286  T
Q  193 agagtgaannnnnnnctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagaggagagtgtaattc 276  Q
     |||||||       |||| |||||||||| ||||||| ||   ||||||||||||||| ||| | |||||| |||||||||||    
T  27226287 ggagtgaaatattttctaatatgttttgaaaaagaggggagggaaatgtatattttaacataagaggagaggggagtgtaattc 27226370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 13 - 156
Target Start/End: Complemental strand, 11916741 - 11916600
Alignment:
Q  13 aatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnnaagtgtgttaaattattatttttt-gctagattattagaaataa 111  Q
    |||||||||| ||||||||| ||||||||||||||||  ||||||||         || ||||||| ||||| ||||||| |||||||||||||||||||    
T  11916741 aatatgtattcaattttttaatatattaaaatagaccaacaatactattttttttgaattgtgttagattataatttttttgctagattattagaaataa 11916642  T
Q  112 taaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
     |||| |   |||| || |||||||||||||||||||||||||||    
T  11916641 aaaaata---tattaagagagtaaagtgtagattttaacataaga 11916600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 87 - 191
Target Start/End: Original strand, 44649145 - 44649250
Alignment:
Q  87 ttttttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataag--annnnnnnnatgtaattcaagcttctctt 184  Q
    ||||||||||||||||||||||| | |||||| | ||||||||||||||||||||||||||||||||||  |        ||||||||||||||||||||    
T  44649145 ttttttgctagattattagaaattaaaaaaaata-tattgagggagtaaagtgtagattttaacataagaaatgaggggaatgtaattcaagcttctctt 44649243  T
Q  185 aggggag 191  Q
    |||||||    
T  44649244 aggggag 44649250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 87 - 251
Target Start/End: Original strand, 45195094 - 45195258
Alignment:
Q  87 ttttttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga--nnnnnnnnatgtaattcaagcttctctt 184  Q
    |||||| ||||||| |||||||||| |||||   ||||||||||||||||||||||||||||||||||||          ||||||||||||||||||||    
T  45195094 tttttttctagatttttagaaataaaaaaaat--atattgagggagtaaagtgtagattttaacataagaggggaggagaatgtaattcaagcttctctt 45195191  T
Q  185 aggggaggagagtgaannnnnnnctaacatgttttgaataagagggaagaagaatgtatattttaac 251  Q
    | |||||| |||||||       |||| ||||||||||||| |||| ||  || |||||||||||||    
T  45195192 aagggaggcgagtgaaaagttttctaatatgttttgaataaaaggggaggggagtgtatattttaac 45195258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 69 - 276
Target Start/End: Original strand, 27931140 - 27931350
Alignment:
Q  69 aagtgtgttaaattattatt--ttttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaa-cataaga--nnnnnnn 163  Q
    |||||||||| |||||||||  ||||||||||||||||||||||| ||| ||   |||||||||||||||||||||||||||| |||||||             
T  27931140 aagtgtgttagattattattatttttgctagattattagaaataaaaaataat--tattgagggagtaaagtgtagattttaaccataagaggggagaga 27931237  T
Q  164 natgtaattcaagcttctcttaggggaggagagtgaannnnnnnctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagag 263  Q
     |||||||||||||||||||||||||||| | |||||       | ||  ||||||||||||||||| ||   | ||||||||||||| ||| | | |||    
T  27931238 aatgtaattcaagcttctcttaggggaggggggtgaaaagttttcaaatttgttttgaataagaggggagggaattgtatattttaacataagaggggag 27931337  T
Q  264 gagagtgtaattc 276  Q
    | |||||||||||    
T  27931338 gggagtgtaattc 27931350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 69 - 156
Target Start/End: Original strand, 25087839 - 25087926
Alignment:
Q  69 aagtgtgttaaattattatttt-ttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    |||||| ||| ||||||||||| ||||||||||||||||||||| |||||| | || ||||||||||||||||||||||||||| ||||    
T  25087839 aagtgtattagattattatttttttgctagattattagaaataacaaaaaa-attaatgagggagtaaagtgtagattttaacacaaga 25087926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 87 - 257
Target Start/End: Original strand, 44645789 - 44645960
Alignment:
Q  87 ttttttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataag--annnnnnnnatgtaattcaagcttctctt 184  Q
    ||||||||||||||||||||||| | |||||| | ||||||||||||||||| ||||||||||||||||  |        ||||||||||||||||||||    
T  44645789 ttttttgctagattattagaaattaaaaaaaata-tattgagggagtaaagtatagattttaacataagaaatgaggggaatgtaattcaagcttctctt 44645887  T
Q  185 aggggaggagagtgaannnnnnnctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaa 257  Q
    | | |||  |||||||       |||| || ||||||||||||||| |  ||| ||||||||||||| |||||    
T  44645888 acgagagatgagtgaaatattttctaatatattttgaataagaggggatgagagtgtatattttaacataaaa 44645960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 24 - 156
Target Start/End: Original strand, 13573958 - 13574085
Alignment:
Q  24 aattttttattatattaaaatagacccgcaatactannnnnnnnnaagtgtgttaaattattatttttt-gctagattattagaaataataaaaaagaat 122  Q
    |||||||||||||||||||||||| ||  |||||||         |||||||||| ||||||||||||| || |||||||||||||||| |||      |    
T  13573958 aattttttattatattaaaatagatccaaaatactatttttttcgaagtgtgttagattattatttttttgcaagattattagaaataaaaaa------t 13574051  T
Q  123 attgagggagtaaagtgtagattttaacataaga 156  Q
    ||||||||||||||||||| ||||||||||||||    
T  13574052 attgagggagtaaagtgtatattttaacataaga 13574085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 156
Target Start/End: Original strand, 27532359 - 27532499
Alignment:
Q  13 aatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnnaagtgtgttaaattattatttt-ttgctagattattagaaataa 111  Q
    |||||||||| || ||||||||||||||||||| || ||||||||||         | |||||||| |||||||||   |||||||||||||||||||||    
T  27532359 aatatgtattcaaatttttattatattaaaataaactcgcaatactatttttttcca-gtgtgttagattattattaaattgctagattattagaaataa 27532457  T
Q  112 taaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
     |||||    |||||||||||||||||||||||||||| ||||||    
T  27532458 aaaaaat---tattgagggagtaaagtgtagattttaaaataaga 27532499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 69 - 276
Target Start/End: Original strand, 23739652 - 23739861
Alignment:
Q  69 aagtgtgttaaattattattttttgctagattattagaaataataaaaaagaa--tattgagggagtaaagtgtagattttaacataaga--nnnnnnnn 164  Q
    |||||||||| ||||||  |||||||||||||||||||||||| |||||| ||  |||||||||| ||| | |||||||||||| |||||              
T  23739652 aagtgtgttagattatt--tttttgctagattattagaaataaaaaaaaaaaaactattgagggactaacgcgtagattttaacttaagaggggaggggg 23739749  T
Q  165 atgtaattcaagcttctcttaggggaggagagtgaannnnnnnctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagagg 264  Q
    |||||||| |||||||||| | ||||||  ||||||       |||| |||||||||||||||||| || ||| ||||||||||||| ||| | | ||||    
T  23739750 atgtaatttaagcttctctcaagggagggaagtgaaagattttctaatatgttttgaataagaggggaggagagtgtatattttaacataagaggggagg 23739849  T
Q  265 agagtgtaattc 276  Q
      ||||||||||    
T  23739850 gaagtgtaattc 23739861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 69 - 276
Target Start/End: Original strand, 36605234 - 36605445
Alignment:
Q  69 aagtgtgttaaattattattttttgctagattattagaaataataaaaaagaa----tattgagggagtaaagtgtagattttaacataaga--nnnnnn 162  Q
    |||||||||| ||||||  ||||||||||||| |||||||||| |||||| ||    |||||||||| ||||| |||||||||||| |||||            
T  36605234 aagtgtgttagattatt--tttttgctagatttttagaaataaaaaaaaaaaaaaactattgagggactaaagcgtagattttaacttaagaggggaggg 36605331  T
Q  163 nnatgtaattcaagcttctcttaggggaggagagtgaannnnnnnctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagaga 262  Q
      ||||||||||||||||||| | || ||| || ||||       |||| |||||||||||||||||||| | || ||||||||||||| ||| | | ||    
T  36605332 aaatgtaattcaagcttctctcaaggaaggggaatgaaatattttctaatatgttttgaataagagggaaaatgagtgtatattttaacataagagggga 36605431  T
Q  263 ggagagtgtaattc 276  Q
    || |||||||||||    
T  36605432 ggggagtgtaattc 36605445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 83 - 156
Target Start/End: Original strand, 47140455 - 47140526
Alignment:
Q  83 attattttttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    ||||||||||| |||||||||||||||||  |||||  ||||||||||| ||||| ||||||||||||||||||    
T  47140455 attattttttgttagattattagaaataaataaaaa--atattgagggactaaagcgtagattttaacataaga 47140526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 69 - 156
Target Start/End: Complemental strand, 7307196 - 7307110
Alignment:
Q  69 aagtgtgttaaattattatttttt--gctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    |||||||||| |||||||||||||  |||||||||||| |||||| ||||||   ||||||||||||||   ||||||||||||||||||    
T  7307196 aagtgtgttagattattattttttttgctagattattataaataaaaaaaaa---tattgagggagtaattcgtagattttaacataaga 7307110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 126 - 276
Target Start/End: Original strand, 17109910 - 17110061
Alignment:
Q  126 gagggagtaaagtgtagattttaacataagannnnnnnn--atgtaattcaagcttctcttaggggaggagagtgaannnnnnnctaacatgttttgaat 223  Q
    |||||||||||||||||||||||||||||||          ||| ||||||||||||||||| |||||| |||||||       |||| ||||||| |||    
T  17109910 gagggagtaaagtgtagattttaacataagaggggaggggaatggaattcaagcttctcttaagggaggggagtgaaaagttttctaatatgttttaaat 17110009  T
Q  224 aagagggaagaagaatgtatattttaacttaaaaagagaggagagtgtaattc 276  Q
    |||||||||| ||| ||||||||||||| ||| | | ||||  ||||||||||    
T  17110010 aagagggaag-agagtgtatattttaacataagaggggagggtagtgtaattc 17110061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 13 - 156
Target Start/End: Complemental strand, 51612093 - 51611951
Alignment:
Q  13 aatatgtattaaattttttattata---ttaaaatagacccgcaatactannnnnnnnnaagtgtgttaaattattatttttt-gctagattattagaaa 108  Q
    |||||||||| ||||||||||||||   ||||||||||||||||||||||         |||||||||| ||||| ||||||| || ||||||||| |||    
T  51612093 aatatgtattcaattttttattatactattaaaatagacccgcaatactattttttga-aagtgtgttagattataatttttttgcaagattattataaa 51611995  T
Q  109 taataaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    |||  ||||    | |||||||| ||||||||||||||||||||||||    
T  51611994 taaataaaa----ttttgagggaataaagtgtagattttaacataaga 51611951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 87 - 276
Target Start/End: Original strand, 50143907 - 50144096
Alignment:
Q  87 ttttttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataagannnnnnnn---atgtaattcaagcttctct 183  Q
    ||||| ||||||||||||||||||| || |||   |||||||||| ||||| |||||||||||| |||||           ||| |||||||||||||||    
T  50143907 tttttagctagattattagaaataaaaacaaa---tattgagggactaaagcgtagattttaacttaagaggggagggggaatgcaattcaagcttctct 50144003  T
Q  184 taggggaggagagtgaannnnnnnctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagaggagagtgtaattc 276  Q
       |||||| |||||||       |||| |||||||||||||||||| || ||| ||||||||||||| ||| | | || |||||||||||||    
T  50144004 ccagggaggggagtgaaaaattttctaatatgttttgaataagaggggaggagagtgtatattttaacataagaggggatgagagtgtaattc 50144096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 110 - 156
Target Start/End: Original strand, 12126423 - 12126469
Alignment:
Q  110 aataaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    ||||||||| | |||||||||||||||||||||||||||||||||||    
T  12126423 aataaaaaaaattattgagggagtaaagtgtagattttaacataaga 12126469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 165 - 276
Target Start/End: Original strand, 29510412 - 29510523
Alignment:
Q  165 atgtaattcaagcttctcttaggggaggagagtgaannnnnnnctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagagg 264  Q
    ||||||||||||||||| ||| ||||||||||||||       |||| |||||||||||||||||| ||  || ||||||||||||| ||| | |  |||    
T  29510412 atgtaattcaagcttctattatgggaggagagtgaaatattttctaatatgttttgaataagaggggaggggagtgtatattttaacataagagggaagg 29510511  T
Q  265 agagtgtaattc 276  Q
     |||||||||||    
T  29510512 ggagtgtaattc 29510523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 8 - 156
Target Start/End: Original strand, 47216501 - 47216646
Alignment:
Q  8 cgaagaatatgtattaaattttttattatattaaaatagacccgcaatacta-nnnnnnnnnaagtgtgttaaattattat--tttttgctagattatta 104  Q
    |||| |||||||||| ||||||||||||||||||||||||| |  ||||| |          |||||||||| ||||||||  ||||||||| |||||||    
T  47216501 cgaaaaatatgtattcaattttttattatattaaaatagacacataatacaatttttttccaaagtgtgttagattattattatttttgctaaattatta 47216600  T
Q  105 gaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    ||||||| ||||      ||||||||||||||  ||||||||||||||||||    
T  47216601 gaaataaaaaaa------attgagggagtaaatggtagattttaacataaga 47216646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 165 - 275
Target Start/End: Original strand, 794681 - 794791
Alignment:
Q  165 atgtaattcaagcttctcttaggggaggagagtgaannnnnnnctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagagg 264  Q
    ||||||||||||||||||| | |||||| |||||||       |||| |||||||||||||||| | ||  || ||||||||||||| ||| | | ||||    
T  794681 atgtaattcaagcttctctcaagggaggggagtgaaatattttctaatatgttttgaataagagaggaggggagtgtatattttaacataagaggggagg 794780  T
Q  265 agagtgtaatt 275  Q
    |||||||||||    
T  794781 agagtgtaatt 794791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 8 - 156
Target Start/End: Complemental strand, 45559393 - 45559247
Alignment:
Q  8 cgaagaatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnnaagtgtgttaaattattattttt-tgctaga-ttattag 105  Q
    |||| |||||||||| |||||| ||| |||||||||||||||||||||||||         || ||||||| ||| || ||||| | ||||| || ||||    
T  45559393 cgaaaaatatgtattcaattttctatcatattaaaatagacccgcaatactattttttcgaaa-tgtgttagatttttttttttcttctagattttttag 45559295  T
Q  106 aaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    |||||| |||||||  ||||||| || ||||||||||||||||||||||||    
T  45559294 aaataa-aaaaaag--tattgagagactaaagtgtagattttaacataaga 45559247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 276
Target Start/End: Original strand, 2275716 - 2275827
Alignment:
Q  165 atgtaattcaagcttctcttaggggaggagagtgaannnnnnnctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagagg 264  Q
    |||||||| |||||||||| | |||||| |||| ||       ||||||| |||| |||||||| | || ||||||||||||||||| ||| |||| |||    
T  2275716 atgtaattgaagcttctctcaagggaggggagttaaatattttctaacatattttaaataagagcggaggagaatgtatattttaacataagaagaaagg 2275815  T
Q  265 agagtgtaattc 276  Q
     |||||||||||    
T  2275816 ggagtgtaattc 2275827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 59
Target Start/End: Original strand, 37419255 - 37419301
Alignment:
Q  13 aatatgtattaaattttttattatattaaaatagacccgcaatacta 59  Q
    |||||||||| || |||| ||||||||||||||||||||||||||||    
T  37419255 aatatgtattcaaattttgattatattaaaatagacccgcaatacta 37419301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 276
Target Start/End: Complemental strand, 42830678 - 42830567
Alignment:
Q  165 atgtaattcaagcttctcttaggggaggagagtgaannnnnnnctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagagg 264  Q
    ||||||||||||||||||| | |||||| |||||||       |||| |||||||||||||||||| ||   ||||||||||||||| ||| | | | ||    
T  42830678 atgtaattcaagcttctctcaagggaggggagtgaaatattttctaatatgttttgaataagaggggagggaaatgtatattttaacataagaggggcgg 42830579  T
Q  265 agagtgtaattc 276  Q
     |||||||||||    
T  42830578 ggagtgtaattc 42830567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 87 - 156
Target Start/End: Original strand, 6645010 - 6645078
Alignment:
Q  87 ttttttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    |||||||||||||| |||||||||| |||| | | |||  |||||||||| |||||||||||||||||||    
T  6645010 ttttttgctagattgttagaaataaaaaaata-attatgaagggagtaaaatgtagattttaacataaga 6645078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 111 - 156
Target Start/End: Complemental strand, 25068418 - 25068373
Alignment:
Q  111 ataaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    |||||||| |||||||||||||||||||||| |||||||| |||||    
T  25068418 ataaaaaaaaatattgagggagtaaagtgtatattttaacttaaga 25068373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 69 - 156
Target Start/End: Complemental strand, 47291806 - 47291722
Alignment:
Q  69 aagtgtgttaaattattattttttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    |||||||||| ||||| ||||||||||||||||||| |||||||         |||||||||| ||||||||||||||||||||||||    
T  47291806 aagtgtgttagattataattttttgctagattattaaaaataat---tttttttattgagggattaaagtgtagattttaacataaga 47291722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 72 - 156
Target Start/End: Original strand, 7842164 - 7842247
Alignment:
Q  72 tgtgttaaattattattttttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    ||||||| |||||| ||||||||||||||||||||||||| | |||| | |||||||||| |||   ||||| |||||| |||||    
T  7842164 tgtgttagattatt-ttttttgctagattattagaaataaaataaaaaactattgagggactaacacgtagagtttaacttaaga 7842247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 108 - 156
Target Start/End: Original strand, 41322173 - 41322221
Alignment:
Q  108 ataataaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    |||| |||||| |||||||||||||||||||||| |||||||| |||||    
T  41322173 ataaaaaaaaaaaatattgagggagtaaagtgtatattttaacttaaga 41322221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 69 - 156
Target Start/End: Complemental strand, 1114446 - 1114362
Alignment:
Q  69 aagtgtgttaaattattattttttg---ctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    |||||||||| ||| |||||||||    ||||||||||||||||| |||||||   |||||||  ||||||||||||||||||||||||||    
T  1114446 aagtgtgttagatttttattttttttgtctagattattagaaata-taaaaaa---tattgag--agtaaagtgtagattttaacataaga 1114362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 113 - 156
Target Start/End: Complemental strand, 25813113 - 25813070
Alignment:
Q  113 aaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    |||||| |||||||||||||||||||||| |||||||| |||||    
T  25813113 aaaaaaaaatattgagggagtaaagtgtatattttaacttaaga 25813070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 156
Target Start/End: Original strand, 1116889 - 1117031
Alignment:
Q  13 aatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnnaagtgtgttaaattattattttttg-ctagattattagaaataa 111  Q
    |||||||||| || |||| |||||||||||||||||  ||| |||||         ||||| |||| |||||||||||||  ||| || |||| ||||||    
T  1116889 aatatgtatttaaattttgattatattaaaatagacatgcattactatttttttttaagtgggttagattattattttttaactatatcattaaaaataa 1116988  T
Q  112 taaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
      | |||  ||||| ||||||||||||||||||||||| ||||||    
T  1116989 atataaa--atattaagggagtaaagtgtagattttaatataaga 1117031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 94 - 156
Target Start/End: Complemental strand, 35503356 - 35503295
Alignment:
Q  94 ctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    |||||||||||||||||| || ||||| |||| |||| | ||| |||||||||||||||||||    
T  35503356 ctagattattagaaataaaaacaaagattattaaggg-ggaaaatgtagattttaacataaga 35503295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 154
Target Start/End: Complemental strand, 36511618 - 36511555
Alignment:
Q  89 ttttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataa 154  Q
    |||| ||| |||||||||||||| ||||||  || |||| ||||||||| ||||||||||||||||    
T  36511618 ttttactaaattattagaaataaaaaaaaa--atgttgaaggagtaaagcgtagattttaacataa 36511555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 156
Target Start/End: Complemental strand, 1386057 - 1386013
Alignment:
Q  112 taaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    ||||||| |||| ||||||||||||||||| |||||||| |||||    
T  1386057 taaaaaaaaataatgagggagtaaagtgtatattttaacttaaga 1386013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 156
Target Start/End: Complemental strand, 38011263 - 38011219
Alignment:
Q  112 taaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    ||||||| |||||||| ||||||||||||| |||||||| |||||    
T  38011263 taaaaaataatattgaaggagtaaagtgtatattttaacttaaga 38011219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 69 - 150
Target Start/End: Original strand, 45738506 - 45738582
Alignment:
Q  69 aagtgtgttaaattattattttttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaac 150  Q
    |||||||||| ||||||  ||||||||||||| |||||   ||||||||| | |||||| ||| ||||| ||||||||||||    
T  45738506 aagtgtgttatattatt--tttttgctagatttttaga---aataaaaaaaactattgaaggactaaagcgtagattttaac 45738582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 127; Significance: 1e-65; HSPs: 64)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 8 - 276
Target Start/End: Complemental strand, 20540599 - 20540330
Alignment:
Q  8 cgaagaatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnnaagtgtgttaaattattattttttgctagattattagaa 107  Q
    |||| |||||||||| ||||||||||||||||||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||    
T  20540599 cgaaaaatatgtattcaattttttattatattaaaatagacccgcaatactatttttttt-aagtgtgttaaattattattttttgctagattattagaa 20540501  T
Q  108 ataataaaaaagaatattgagggagtaaagtgtagattttaacataaga--nnnnnnnnatgtaattcaagcttctcttaggggaggagagtgaannnnn 205  Q
    |||||||||||||||||||| |||||||||| |||||||||||||||||          |||||||||||||||||||||||||||| |||||||         
T  20540500 ataataaaaaagaatattgatggagtaaagtttagattttaacataagaggggagtgggatgtaattcaagcttctcttaggggaggggagtgaaatttt 20540401  T
Q  206 nnctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagaggagagtgtaattc 276  Q
      |||| ||||||||||||| |||| || ||| ||||||||||||||||||| | || || ||||||||||    
T  20540400 ttctaatatgttttgaataaaaggggaggagagtgtatattttaacttaaaaggggaagatagtgtaattc 20540330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 8 - 255
Target Start/End: Complemental strand, 9119133 - 9118886
Alignment:
Q  8 cgaagaatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnnaagtgtgttaaattattattttttgctagattattagaa 107  Q
    |||| |||||||||| ||||||||||||||||||||||||||||||||| ||         |||||||||||||||||||||||||||||||||||||||    
T  9119133 cgaaaaatatgtattcaattttttattatattaaaatagacccgcaataatatttttttttaagtgtgttaaattattattttttgctagattattagaa 9119034  T
Q  108 ataataaaaaagaatattgagggagtaaagtgtagattttaacataaga-nnnnnnnnatgtaattcaagcttctcttaggggaggagagtgaannnnnn 206  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||         |||||||||||||||||||||||| ||| | |||||          
T  9119033 ataataaaaaagaatattgagggagtaaagtgtaaattttaacataagaggggaggggatgtaattcaagcttctcttagggtagg-gggtgaaattttt 9118935  T
Q  207 nctaacatgttttgaataagagggaagaagaatgtatattttaacttaa 255  Q
     |||| |||||||||||||||||| ||| || |||||||||||||||||    
T  9118934 tctaatatgttttgaataagaggggagaggagtgtatattttaacttaa 9118886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 8 - 276
Target Start/End: Original strand, 37334362 - 37334632
Alignment:
Q  8 cgaagaatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnnaagtgtgttaaattattattttttgctagattattagaa 107  Q
    |||| |||||||||| |||||||||||||||||||||||||||  |||||||         ||||||||||||||||||||||||||||||||| |||||    
T  37334362 cgaaaaatatgtattcaattttttattatattaaaatagacccaaaatactatttttttttaagtgtgttaaattattattttttgctagattagtagaa 37334461  T
Q  108 ataataaaaaagaatattgagggagtaaagtgtagattttaacataaga--nnnnnnnnatgtaattcaagcttctcttaggggaggagagtgaannnnn 205  Q
    ||||||||||||||| ||||||||||||| |||||||||||||||||||          |||||||||||||||||||||||||||| |||||||         
T  37334462 ataataaaaaagaatcttgagggagtaaattgtagattttaacataagaggggagggggatgtaattcaagcttctcttaggggaggggagtgaaatttt 37334561  T
Q  206 nnctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagaggagagtgtaattc 276  Q
      |||| |||||||||||||||||| ||  || ||||||||||||||||| ||| ||||  ||||||||||    
T  37334562 ttctaatatgttttgaataagaggggaggggagtgtatattttaacttaagaagggagggaagtgtaattc 37334632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 8 - 276
Target Start/End: Original strand, 37657850 - 37658119
Alignment:
Q  8 cgaagaatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnnaagtgtgttaaattattattttttgctagattattagaa 107  Q
    |||| |||||||||| ||||||||||||||||||||||||||||||||| ||         |||||||||||||||||||||||||||||||||||||||    
T  37657850 cgaaaaatatgtattcaattttttattatattaaaatagacccgcaataatatttttttt-aagtgtgttaaattattattttttgctagattattagaa 37657948  T
Q  108 ataataaaaaagaatattgagggagtaaagtgtagattttaacataaga--nnnnnnnnatgtaattcaagcttctcttaggggaggagagtgaannnnn 205  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||          ||||||||||||||||||| |||||||| | ||| |         
T  37657949 ataataaaaaagaatattgagggagtaaagtgtagattttaacataagaggggagggggatgtaattcaagcttctctaaggggaggggggtggaatttt 37658048  T
Q  206 nnctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagaggagagtgtaattc 276  Q
      |||| |||||||||||||||||| ||  || ||||||||||||||||| | | |||| |||||||||||    
T  37658049 ttctaatatgttttgaataagaggggaggggagtgtatattttaacttaagaggggaggggagtgtaattc 37658119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 8 - 255
Target Start/End: Original strand, 20691571 - 20691821
Alignment:
Q  8 cgaagaatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnnaagtgtgttaaattattatttt--ttgctagattattag 105  Q
    |||| |||||||||| ||||||||||||||||||||||||||| ||||||||         ||||||||||||||||||||||  |||||||||||||||    
T  20691571 cgaaaaatatgtattcaattttttattatattaaaatagacccccaatactatttttttttaagtgtgttaaattattattttttttgctagattattag 20691670  T
Q  106 aaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga-nnnnnnnnatgtaattcaagcttctcttaggggaggagagtgaannnn 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||         |||||||||||||||||||||||||||| ||| |||        
T  20691671 aaataataaaaaagaatattgagggagtaaagtgtagattttaacataagaggggagggaatgtaattcaagcttctcttaggggaggggagggaaattt 20691770  T
Q  205 nnnctaacatgttttgaataagagggaagaagaatgtatattttaacttaa 255  Q
       |||| ||||||||||||| |||| ||  || |||||||||||||||||    
T  20691771 tttctaatatgttttgaataataggggaggggagtgtatattttaacttaa 20691821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 8 - 255
Target Start/End: Complemental strand, 4055026 - 4054777
Alignment:
Q  8 cgaagaatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnnaagtgtgttaaattattatttttt-gctagattattaga 106  Q
    |||| |||||||||| ||||||||||||||||||||||||||||||||||||         |||||||||||||||||||||||| ||||||||||||||    
T  4055026 cgaaaaatatgtattcaattttttattatattaaaatagacccgcaatactattttttct-aagtgtgttaaattattatttttttgctagattattaga 4054928  T
Q  107 aataataaaaaagaatattgagggagtaaagtgtagattttaacataaga--nnnnnnnnatgtaattcaagcttctcttaggggaggagagtgaannnn 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||| |||||||        
T  4054927 aataataaaaaagaatattgagggagtaaagtgtagattttaacataagaggggaggggaatgtaattcaagcttctcttaggggaggggagtgaaattt 4054828  T
Q  205 nnnctaacatgttttgaataagagggaagaagaatgtatattttaacttaa 255  Q
       |||| ||||||||||||||| || ||   | |||||||||||||||||    
T  4054827 tttctaatatgttttgaataagatgggagggaagtgtatattttaacttaa 4054777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 13 - 156
Target Start/End: Original strand, 24625276 - 24625417
Alignment:
Q  13 aatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnnaagtgtgttaaattattattttttgctagattattagaaataat 112  Q
    |||||||||| ||||||| ||||||||||||||||||||||||| ||         ||||||||||||||||||||||||||||||||| ||||||||||    
T  24625276 aatatgtattcaattttt-attatattaaaatagacccgcaataatatttttttt-aagtgtgttaaattattattttttgctagattaatagaaataat 24625373  T
Q  113 aaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  24625374 aaaaaagaatattgagggagtaaagtgtagattttaacataaga 24625417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 69 - 187
Target Start/End: Original strand, 1198982 - 1199100
Alignment:
Q  69 aagtgtgttaaattattattttttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataagannnnnnnnatgt 168  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |        || |    
T  1198982 aagtgtgttaaattattattttttgctagattattagaaataataaaaatgaatattgagggagtaaagtgtagattttaacataaaagaggagagatat 1199081  T
Q  169 aattcaagcttctcttagg 187  Q
    |||||||||||||||||||    
T  1199082 aattcaagcttctcttagg 1199100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 13 - 156
Target Start/End: Original strand, 18524144 - 18524286
Alignment:
Q  13 aatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnnaagtgtgttaaattattattttttgctagattattagaaataat 112  Q
    |||||||||| || |||| ||||||||||||||||||||||||||||         |||||||||| |||||||||||||||||||||||||||||| |     
T  18524144 aatatgtattcaaattttgattatattaaaatagacccgcaatactatttttttcgaagtgtgttagattattattttttgctagattattagaaatta- 18524242  T
Q  113 aaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    |||||| ||||||||||||||||||||||| |||||||||||||    
T  18524243 aaaaaaaaatattgagggagtaaagtgtaggttttaacataaga 18524286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 8 - 276
Target Start/End: Original strand, 4877154 - 4877419
Alignment:
Q  8 cgaagaatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnnaagtgtgttaaattattatt-ttttgctagattattaga 106  Q
    |||| |||||||||| ||||||||||||||||||||||||||||||||||||         |||||||||| ||||||||| |||| ||||||| |||||    
T  4877154 cgaaaaatatgtattcaattttttattatattaaaatagacccgcaatactatttttttcgaagtgtgttagattattattatttttctagattgttaga 4877253  T
Q  107 aataataaaaaagaatattgagggagtaaagtgtagattttaacataa--gannnnnnnnatgtaattcaagcttctcttaggggaggagagtgaannnn 204  Q
    ||||| ||| |   ||||||||||||||||||||||||||||||||||  |         |||||||||||||||||||||||||||      |||        
T  4877254 aataaaaaatat--atattgagggagtaaagtgtagattttaacataaggggtgaggggaatgtaattcaagcttctcttaggggag----cggaaattt 4877347  T
Q  205 nnnctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagaggagagtgtaattc 276  Q
       |||| |||||||||||||||||| ||  || ||||||||||||| ||| | | ||||||||||||||||    
T  4877348 tttctaatatgttttgaataagaggggaggggagtgtatattttaacataagaggggaggagagtgtaattc 4877419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 87 - 251
Target Start/End: Complemental strand, 8007279 - 8007116
Alignment:
Q  87 ttttttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga--nnnnnnnnatgtaattcaagcttctctt 184  Q
    |||||| |||||||||||||||||| ||||||   |||||||||| ||||||||||||||||||||||||          ||||||||||||||||||||    
T  8007279 ttttttcctagattattagaaataagaaaaaa---tattgagggattaaagtgtagattttaacataagagggaagaggaatgtaattcaagcttctctt 8007183  T
Q  185 aggggaggagagtgaannnnnnnctaacatgttttgaataagagggaagaagaatgtatattttaac 251  Q
    ||||||||||||||||        ||| || ||||||||||||| | |||||| |||||||||||||    
T  8007182 aggggaggagagtgaaatattttataatatattttgaataagagaggagaagagtgtatattttaac 8007116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 69 - 156
Target Start/End: Complemental strand, 15175447 - 15175362
Alignment:
Q  69 aagtgtgttaaattattattttttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    |||||||||| |||||||||||||||||||||||||||||||  |||||| |||||||||||||||||| ||||||||||||| ||||    
T  15175447 aagtgtgttagattattattttttgctagattattagaaata--aaaaaaaaatattgagggagtaaagagtagattttaacaaaaga 15175362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 87 - 276
Target Start/End: Complemental strand, 20183581 - 20183390
Alignment:
Q  87 ttttttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga--nnnnnnnnatgtaattcaagcttctctt 184  Q
    ||||||||||||||||||||||||| | |||| | |||||||||| |||||||||||||||||| |||||          ||||||||||||| ||||||    
T  20183581 ttttttgctagattattagaaataaaataaaaaattattgagggactaaagtgtagattttaacttaagaggggagggaaatgtaattcaagcctctctt 20183482  T
Q  185 aggggaggagagtgaannnnnnnctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagaggagagtgtaattc 276  Q
    | ||||||   ||| |       |||| |||||||||||||||||||||  || ||||||||||||| ||| ||| |||| |||||||||||    
T  20183481 aagggagggttgtggaatattttctaatatgttttgaataagagggaaggggagtgtatattttaacataagaagggaggggagtgtaattc 20183390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 69 - 276
Target Start/End: Complemental strand, 19408772 - 19408569
Alignment:
Q  69 aagtgtgttaaattattattttttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataagannnnnnnnatgt 168  Q
    |||||||| | |||||| ||||||||||||||||||||||||| ||||||   |||||||| | ||||| |||||||||||| |||||        ||||    
T  19408772 aagtgtgtcagattatt-ttttttgctagattattagaaataaaaaaaaat--tattgaggaactaaagcgtagattttaacttaagaggggggg-atgt 19408677  T
Q  169 aattcaagcttctcttaggggaggagagtgaannnnnnnctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagaggagag 268  Q
    ||||||||||||||| | |||||| |||||||       |||| |||||||||||||||||| ||  || ||||||||||||| ||| | | |||| |||    
T  19408676 aattcaagcttctctcaagggaggggagtgaaatatattctaatatgttttgaataagaggggaggggagtgtatattttaacataagaggggaggggag 19408577  T
Q  269 tgtaattc 276  Q
    ||||||||    
T  19408576 tgtaattc 19408569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 13 - 230
Target Start/End: Original strand, 36762565 - 36762782
Alignment:
Q  13 aatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnnaa-gtgtgttaaattattattttttg-ctagattattagaaata 110  Q
    |||||||||| |||||||||||||||||||||||||| | |||||||         || |||||||| ||||||| |||||| |||||||||||||||||    
T  36762565 aatatgtattcaattttttattatattaaaatagaccggtaatactattgtttttcaaagtgtgttagattattaatttttggctagattattagaaata 36762664  T
Q  111 ataaaaaagaatattgagggagtaaagtgtagattttaacataagannnnnnnna-tgtaattcaagcttctcttaggggaggagagtgaannnnnnnct 209  Q
    | ||||||   ||| |||||| ||||||||||||||||||| ||||        | |||||||||||| ||| |||||||||| || ||||       ||    
T  36762665 aaaaaaaa---tatcgagggactaaagtgtagattttaacacaagaggggagggagtgtaattcaagcatcttttaggggaggggattgaaaagatttct 36762761  T
Q  210 aacatgttttgaataagaggg 230  Q
    || ||||||||||||||||||    
T  36762762 aatatgttttgaataagaggg 36762782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 13 - 276
Target Start/End: Original strand, 27979683 - 27979944
Alignment:
Q  13 aatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnn-aagtgtgttaaattattattttttgctagattattagaaataa 111  Q
    |||||||||| || |||| |||||||| ||||| |||||||||||||          || ||| ||| ||| ||||||||| ||||||||||||||||||    
T  27979683 aatatgtattcaaattttgattatatttaaataaacccgcaatactattttttcccgaattgttttagattgttattttttactagattattagaaataa 27979782  T
Q  112 taaaaaagaatattgagggagtaaagtgtagattttaacataaga--nnnnnnnnatgtaattcaagcttctcttaggggaggagagtgaannnnnnnct 209  Q
     ||||     ||||||||||||||||||||||||||||||| |||          ||||||||||||| |||||||||| ||| |||||||       ||    
T  27979783 aaaaa-----tattgagggagtaaagtgtagattttaacatgagaggggaggggaatgtaattcaagcatctcttagggaaggggagtgaaattttttct 27979877  T
Q  210 aacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagaggagagtgtaattc 276  Q
    || |||||||||||||||||| ||  || ||||||||||||| ||| |   |||||| |||||||||    
T  27979878 aatatgttttgaataagaggggaggggagtgtatattttaacataagagatgaggagggtgtaattc 27979944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 156
Target Start/End: Complemental strand, 3933600 - 3933458
Alignment:
Q  13 aatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnn--aagtgtgttaaattattatttttt-gctagattattagaaat 109  Q
    ||||||||||  |||||||||||||||||||||||| | ||||||||           |||||||||| ||| || |||||| |||||||||||||||||    
T  3933600 aatatgtatttcattttttattatattaaaatagacgcacaatactattttttttccgaagtgtgttagatttttttttttttgctagattattagaaat 3933501  T
Q  110 aataaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    || | ||||    ||||||||||||||||||||||||||||||||||    
T  3933500 aaaataaaa----attgagggagtaaagtgtagattttaacataaga 3933458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 69 - 156
Target Start/End: Original strand, 25214658 - 25214743
Alignment:
Q  69 aagtgtgttaaattattattttttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    ||||||| || ||||||||||||||| ||||| |||||||| | |||||| ||||||||||||||||| |||||||||||||||||||    
T  25214658 aagtgtggtatattattattttttgcaagatt-ttagaaattaaaaaaaa-aatattgagggagtaaaatgtagattttaacataaga 25214743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 13 - 276
Target Start/End: Original strand, 40957197 - 40957459
Alignment:
Q  13 aatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnnaagtgtgttaaattattatt--ttttgctagattattagaaata 110  Q
    |||||||||| |||||||| |||||||||||||||||   ||||| |         ||||||| || |||||||||  |||||||||||||||| |||||    
T  40957197 aatatgtatttaattttttgttatattaaaatagacctataatacaatttttttcgaagtgtggtagattattattatttttgctagattattataaata 40957296  T
Q  111 ataaaaaagaatattgagggagtaaagtgtagattttaacataaga--nnnnnnnnatgtaattcaagcttctcttaggggaggagagtgaannnnnnnc 208  Q
    | ||||     |||||| ||||||||||||||||||||  ||||||          ||||||||||||||||||||||| |||| | |||||            
T  40957297 aaaaaa-----tattgatggagtaaagtgtagattttattataagaggggaggagaatgtaattcaagcttctcttaggagaggggtgtgaaaagtttga 40957391  T
Q  209 taacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagaggagagtgtaattc 276  Q
    ||| |||||||||||||||| | || ||| ||||||||||||| ||| | | |||| |||||||||||    
T  40957392 taatatgttttgaataagagaggaggagattgtatattttaacctaagaggggaggtgagtgtaattc 40957459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 8 - 156
Target Start/End: Complemental strand, 30920807 - 30920664
Alignment:
Q  8 cgaagaatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnnaagtgtgttaaattattattttttgctagattattagaa 107  Q
    |||| |||||||||| || |||| || ||| |||||||||||||||||||||         |||||||||  |||||| |||||||||||||||||| ||    
T  30920807 cgaaaaatatgtattcaaattttgataataataaaatagacccgcaatactatttttctcgaagtgtgtttgattatt-ttttttgctagattattaaaa 30920709  T
Q  108 ataataaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    |||| ||||     ||||| ||||||||||||||||||||||| |||||    
T  30920708 ataaaaaaat----tattgtgggagtaaagtgtagattttaacttaaga 30920664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 87 - 276
Target Start/End: Original strand, 32458366 - 32458557
Alignment:
Q  87 ttttttgctagattattagaaata-ataaaaaagaatattgagggagtaaagtgtagattttaacataagannnnnnnna--tgtaattcaagcttctct 183  Q
    |||||| ||||||||||||||||| |||||||| | |||||||||| ||||| || | ||||||| |||||        |  | ||||||||||||||||    
T  32458366 ttttttcctagattattagaaatatataaaaaa-attattgagggactaaagcgttggttttaacttaagaggggagggaaatataattcaagcttctct 32458464  T
Q  184 taggggaggagagtgaannnnnnnctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagaggagagtgtaattc 276  Q
     | |||||| |||||||       |||| |||||||||||||||||| ||| || ||||||||||||  ||||| | ||||||||||||||||    
T  32458465 caagggaggggagtgaaatattttctaatatgttttgaataagaggggagaggagtgtatattttaatataaaaggggaggagagtgtaattc 32458557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 8 - 59
Target Start/End: Original strand, 1198892 - 1198943
Alignment:
Q  8 cgaagaatatgtattaaattttttattatattaaaatagacccgcaatacta 59  Q
    |||| |||||||||| ||||||||||||||||||||||||||||||||||||    
T  1198892 cgaaaaatatgtattcaattttttattatattaaaatagacccgcaatacta 1198943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 8 - 156
Target Start/End: Original strand, 13279924 - 13280069
Alignment:
Q  8 cgaagaatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnn-aagtgtgttaaattattatttttt-gctagattattag 105  Q
    |||| |||| ||||| || ||||||||||||||||||||| ||||| |||||          |||||||||| ||| | ||||||| |||||||||||||    
T  13279924 cgaaaaatacgtattcaaatttttattatattaaaatagatccgcagtactattgtttcctgaagtgtgttagattttaatttttttgctagattattag 13280023  T
Q  106 aaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    |||||| ||||     |||||||||| ||||||||||||||||||||||||    
T  13280024 aaataaaaaaa-----tattgagggattaaagtgtagattttaacataaga 13280069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 69 - 156
Target Start/End: Original strand, 25278808 - 25278894
Alignment:
Q  69 aagtgtgttaaattattattttttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    ||||||| || ||||||||||||||| ||||| |||||||| | |||||| |  |||||||||||||| |||||||||||||||||||    
T  25278808 aagtgtggtatattattattttttgcaagatt-ttagaaattaaaaaaaaaataattgagggagtaaaatgtagattttaacataaga 25278894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 95 - 276
Target Start/End: Original strand, 31476826 - 31477009
Alignment:
Q  95 tagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataagannnnnnnn--atgtaattcaagcttctcttaggggagg 192  Q
    ||||||||||||||| | |||||| | |||||||||| ||||| |||||||||||| |||||          || |||||||||||||||||| ||||||    
T  31476826 tagattattagaaattaaaaaaaaaattattgagggactaaagagtagattttaacttaagaggggagcggaatataattcaagcttctcttaagggagg 31476925  T
Q  193 agagtgaannnnnnnctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagaggagagtgtaattc 276  Q
     |||||||       |||| |||||||||||||||||| |  | | ||||||||||||| ||| | | |||| |||||||||||    
T  31476926 ggagtgaaatattttctaatatgttttgaataagaggggatgaaagtgtatattttaacataagaggggaggggagtgtaattc 31477009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 94 - 156
Target Start/End: Original strand, 42598850 - 42598910
Alignment:
Q  94 ctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    ||||||||||||||||||  ||||||| |||||||||| ||||||||||||||||||||||||    
T  42598850 ctagattattagaaataa--aaaaagattattgagggattaaagtgtagattttaacataaga 42598910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 87 - 228
Target Start/End: Complemental strand, 10402150 - 10402010
Alignment:
Q  87 ttttttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacat-aagannnnnnnnatgtaattcaagcttctctta 185  Q
    |||||||||||||||||||||||||  ||||| | ||||| |||||||||||||| |||||||||| || |        ||||||||||| |||||||||    
T  10402150 ttttttgctagattattagaaataa--aaaaatattattgtgggagtaaagtgtaaattttaacataaaaaggaggagaatgtaattcaaacttctctta 10402053  T
Q  186 ggggaggagagtgaannnnnnnctaacatgttttgaataagag 228  Q
     ||||||| ||||||       |||| ||||||||||||||||    
T  10402052 cgggaggaaagtgaaatattttctaatatgttttgaataagag 10402010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 156
Target Start/End: Complemental strand, 21687654 - 21687508
Alignment:
Q  8 cgaagaatatgtattaaattttttattatattaaaatagacccgcaatacta-nnnnnnnnnaagtgtgttaaattatta-ttttttgctagattattag 105  Q
    |||| |||||||||| || |||| ||||||||||||||||||||||||||||          |||||||||| | ||||| |||||||||||| ||| |     
T  21687654 cgaaaaatatgtattcaaattttgattatattaaaatagacccgcaatactatcttttttcgaagtgtgttataatattatttttttgctagaatatcat 21687555  T
Q  106 aaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    |||| || ||    ||||||||||||||||||| |||||||||||||||||    
T  21687554 aaattattaa----aatattgagggagtaaagtctagattttaacataaga 21687508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 73 - 156
Target Start/End: Complemental strand, 30782942 - 30782865
Alignment:
Q  73 gtgttaaattattatttttt-gctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    |||||| ||||||||||||| ||||||||||||||||||| ||||       |||||||||||||||||||||||||||||||||    
T  30782942 gtgttagattattatttttttgctagattattagaaataaaaaaa-------ttgagggagtaaagtgtagattttaacataaga 30782865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 69 - 156
Target Start/End: Original strand, 36854029 - 36854112
Alignment:
Q  69 aagtgtgttaaattattattttttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    |||||||||| ||||||||||||||||||||| |||||||||  ||||||    ||| ||||| ||||||||||||||||| ||||||    
T  36854029 aagtgtgttagattattattttttgctagattgttagaaatataaaaaaa----attaagggattaaagtgtagattttaatataaga 36854112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 251
Target Start/End: Original strand, 40027272 - 40027519
Alignment:
Q  8 cgaagaatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnn-aagtgtgttaaattattatt--ttttgctagattatta 104  Q
    |||| |||||||||| || |||| ||||| ||||||||||||| ||||||||          |||||||||| |||||||||  |||||||| |||||||    
T  40027272 cgaaaaatatgtattcaaattttgattatgttaaaatagacccacaatactattttttttcgaagtgtgttagattattattatttttgctaaattatta 40027371  T
Q  105 gaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga--nnnnnnnnatgtaattcaagcttctcttaggggaggagagtgaann 202  Q
     |||| | |||||| | |||| ||||| |||||||||||||| |||||||||          ||||||||||||||||||||||| |||| |||||||      
T  40027372 aaaattaaaaaaaa-attattaagggattaaagtgtagatttgaacataagaagggagggaaatgtaattcaagcttctcttaggagaggggagtgaaat 40027470  T
Q  203 nnnnnctaacatgttttgaataagagggaagaagaatgtatattttaac 251  Q
         |||| || ||||||||||||||| ||   | |||||||||||||    
T  40027471 attttctaatatattttgaataagaggggagggaagtgtatattttaac 40027519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 87 - 276
Target Start/End: Complemental strand, 9017865 - 9017677
Alignment:
Q  87 ttttttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataagannnnnnnna--tgtaattcaagcttctctt 184  Q
    ||||||| ||||||||||||||||| || |||   |||||||||| ||||| ||| |||||||| |||||        |  ||||||||||||||||||     
T  9017865 ttttttgttagattattagaaataaaaacaaa---tattgagggactaaagcgtaaattttaacttaagaggggaaagaaatgtaattcaagcttctctc 9017769  T
Q  185 aggggaggagagtgaannnnnnnctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagaggagagtgtaattc 276  Q
    | ||||||||||||||       |||| |||||||||||||||||| ||   | ||||||||||||| ||| | | |||| |||||||||||    
T  9017768 aagggaggagagtgaaatattttctaatatgttttgaataagaggggagggaagtgtatattttaacataagaggggaggggagtgtaattc 9017677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 88 - 153
Target Start/End: Complemental strand, 32348025 - 32347960
Alignment:
Q  88 tttttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacata 153  Q
    ||||||||||| ||||||||||   |||||| ||||||||||||||||| ||||||||||||||||    
T  32348025 tttttgctagaatattagaaatggaaaaaaaaaatattgagggagtaaaatgtagattttaacata 32347960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 69 - 276
Target Start/End: Complemental strand, 35751749 - 35751546
Alignment:
Q  69 aagtgtgttaaattattattttttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga--nnnnnnnnat 166  Q
    |||||||||| |||||| ||||||||||||||||||||||||| |||||     ||||||||| ||||| |||||||||||| |||||          ||    
T  35751749 aagtgtgttagattatt-ttttttgctagattattagaaataaaaaaaa-----attgagggactaaagcgtagattttaacttaagaggggagggaaat 35751656  T
Q  167 gtaattcaagcttctcttaggggaggagagtgaannnnnnnctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagaggag 266  Q
    ||||||||||||||||| |  ||||| |||||||       |||| ||||||||| |||||||| ||  || ||||||||||||| ||| | | || | |    
T  35751655 gtaattcaagcttctctcaaaggaggggagtgaaatattttctaatatgttttgattaagaggggaggggagtgtatattttaacataagaggggaaggg 35751556  T
Q  267 agtgtaattc 276  Q
    ||||||||||    
T  35751555 agtgtaattc 35751546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 8 - 156
Target Start/End: Complemental strand, 1405877 - 1405734
Alignment:
Q  8 cgaagaatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnnaagtgtgttaaattattattttttgctagattattagaa 107  Q
    |||| |||||||||| || |||| || ||| |||||||||||||||||||||         ||||||||| |||| || |||||||||||||||||||||    
T  1405877 cgaaaaatatgtattcaaattttgataataataaaatagacccgcaatactatttttctcaaagtgtgttcaattttt-ttttttgctagattattagaa 1405779  T
Q  108 ataataaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    |||| ||||     |||||  ||||||||||||||||||| || |||||    
T  1405778 ataaaaaaat----tattgttggagtaaagtgtagattttgacttaaga 1405734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 73 - 200
Target Start/End: Original strand, 38497871 - 38497996
Alignment:
Q  73 gtgttaaattattatttttt-gctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga--nnnnnnnnatgta 169  Q
    |||||| ||||||||||||| |||| |||||||||||||| ||||     |||||||||||||||||||| ||||||| ||||||          |||||    
T  38497871 gtgttagattattatttttttgctaaattattagaaataaaaaaa-----tattgagggagtaaagtgtatattttaatataagatgggagaatgatgta 38497965  T
Q  170 attcaagcttctcttaggggaggagagtgaa 200  Q
    |||||||| ||||||| ||||||||||||||    
T  38497966 attcaagcatctcttaagggaggagagtgaa 38497996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 89 - 156
Target Start/End: Original strand, 31850520 - 31850583
Alignment:
Q  89 ttttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    ||||||||||||||||||||||| ||||| |    |||||||||||||| ||||||||||||||||||    
T  31850520 ttttgctagattattagaaataaaaaaaatg----ttgagggagtaaagcgtagattttaacataaga 31850583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 87 - 156
Target Start/End: Complemental strand, 1931491 - 1931427
Alignment:
Q  87 ttttttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    |||||||| |||||||||||||||| ||||     |||||||||||||||||||||||||||||| ||||    
T  1931491 ttttttgcaagattattagaaataaaaaaa-----tattgagggagtaaagtgtagattttaacaaaaga 1931427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 69 - 146
Target Start/End: Original strand, 10688097 - 10688172
Alignment:
Q  69 aagtgtgttaaattattatttttt-gctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattt 146  Q
    |||||||||| ||||||||||||| | | |||||||| ||||  ||||||| |||||||||||||||||||||||||||    
T  10688097 aagtgtgttagattattatttttttgttggattattacaaat--taaaaaa-aatattgagggagtaaagtgtagattt 10688172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 87 - 154
Target Start/End: Original strand, 17780872 - 17780934
Alignment:
Q  87 ttttttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataa 154  Q
    ||||||| ||||||||||||||||| ||||||     |||||||| ||||||||||||||||||||||    
T  17780872 ttttttgttagattattagaaataaaaaaaaa-----ttgagggactaaagtgtagattttaacataa 17780934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 121 - 156
Target Start/End: Complemental strand, 22730573 - 22730538
Alignment:
Q  121 atattgagggagtaaagtgtagattttaacataaga 156  Q
    ||||||||||||||||||||||||||||||||||||    
T  22730573 atattgagggagtaaagtgtagattttaacataaga 22730538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 276
Target Start/End: Original strand, 6031282 - 6031393
Alignment:
Q  165 atgtaattcaagcttctcttaggggaggagagtgaannnnnnnctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagagg 264  Q
    ||||||||||||||||||| | |||||| |||||||       |||| |||||||||||||||||| ||  || | ||||||||||| ||| ||| || |    
T  6031282 atgtaattcaagcttctctcaagggaggggagtgaaatattttctaatatgttttgaataagaggggagtggagtatatattttaacataagaagggatg 6031381  T
Q  265 agagtgtaattc 276  Q
    | ||||||||||    
T  6031382 aaagtgtaattc 6031393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 120 - 276
Target Start/End: Complemental strand, 6048173 - 6048015
Alignment:
Q  120 aatattgagggagtaaagtgtagattttaacata--agannnnnnnnatgtaattcaagcttctcttaggggaggagagtgaannnnnnnctaacatgtt 217  Q
    ||||||||||||||||||| || |||||||||||  |||        |||||||||||||||||||||| ||||| | |||||       | || ||| |    
T  6048173 aatattgagggagtaaagtataaattttaacataagagaagagataaatgtaattcaagcttctcttagaggaggggggtgaaatattttcaaatatggt 6048074  T
Q  218 ttgaataagagggaagaagaatgtatattttaacttaaaaagagaggagagtgtaattc 276  Q
    ||||||||||||| || ||| ||||||||||||| ||| | | ||||  ||||||||||    
T  6048073 ttgaataagaggggaggagagtgtatattttaacataagaggggagggaagtgtaattc 6048015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 111 - 156
Target Start/End: Complemental strand, 1198525 - 1198480
Alignment:
Q  111 ataaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    |||||||| |||||||||||||||||||||| |||||||| |||||    
T  1198525 ataaaaaaaaatattgagggagtaaagtgtatattttaacttaaga 1198480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 111 - 156
Target Start/End: Original strand, 4055389 - 4055434
Alignment:
Q  111 ataaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    |||||||| |||||||||||||||||||||| |||||||| |||||    
T  4055389 ataaaaaaaaatattgagggagtaaagtgtatattttaacttaaga 4055434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 111 - 156
Target Start/End: Complemental strand, 20691208 - 20691163
Alignment:
Q  111 ataaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    |||||||| |||||||||||||||||||||| |||||||| |||||    
T  20691208 ataaaaaaaaatattgagggagtaaagtgtatattttaacttaaga 20691163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 8 - 57
Target Start/End: Complemental strand, 27302154 - 27302105
Alignment:
Q  8 cgaagaatatgtattaaattttttattatattaaaatagacccgcaatac 57  Q
    |||| |||||||||| || |||| ||||||||||||||||||||||||||    
T  27302154 cgaaaaatatgtatttaaattttgattatattaaaatagacccgcaatac 27302105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 156
Target Start/End: Complemental strand, 5138531 - 5138447
Alignment:
Q  69 aagtgtgttaaattattattttttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    |||||||||| |||||| |||||  ||||||||||| |||||| |||||| | |||||||||| ||||| ||| |||||||| |||||    
T  5138531 aagtgtgttagattatttttttt--ctagattattaaaaataa-aaaaaaaattattgagggactaaagcgtatattttaacttaaga 5138447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 276
Target Start/End: Complemental strand, 21639237 - 21639048
Alignment:
Q  87 ttttttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataagannnnnnnn--atgtaattcaagcttctctt 184  Q
    |||||||||||||||||||||  || ||||||   |||||||||| |||||  ||||||||||| |||||          |||||||| ||||||||||     
T  21639237 ttttttgctagattattagaagaaaaaaaaaat--tattgagggactaaagcatagattttaacttaagatgggagaggaatgtaattgaagcttctctc 21639140  T
Q  185 aggggaggagagtgaannnnnnnctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagaggagagtgtaattc 276  Q
    |  ||||| |||||||       |||| |||||||||||||||||| || ||| ||||||||||||| ||| | | |||  |||||||||||    
T  21639139 aaaggaggggagtgaaatattttctaatatgttttgaataagaggggaggagagtgtatattttaacataagaggggagtggagtgtaattc 21639048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 90 - 155
Target Start/End: Original strand, 2554101 - 2554165
Alignment:
Q  90 tttgctagatt-attagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataag 155  Q
    ||||||||||| ||||||||||| ||||||   || ||||||||||||| |||||||||||||||||    
T  2554101 tttgctagatttattagaaataaaaaaaaat--tactgagggagtaaagcgtagattttaacataag 2554165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 113 - 156
Target Start/End: Original strand, 9119530 - 9119573
Alignment:
Q  113 aaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    |||||| |||||||||||||||||||||| |||||||| |||||    
T  9119530 aaaaaaaaatattgagggagtaaagtgtacattttaacttaaga 9119573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 80 - 154
Target Start/End: Original strand, 12586124 - 12586194
Alignment:
Q  80 attattatttt-ttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataa 154  Q
    ||||||||||| |||||||||||||| |||||| ||||||      ||||||||||||| ||||||||||||||||    
T  12586124 attattattttattgctagattattataaataaaaaaaaaa-----tgagggagtaaagcgtagattttaacataa 12586194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 113 - 156
Target Start/End: Original strand, 13686499 - 13686542
Alignment:
Q  113 aaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    |||||| |||||||||||| |||||||||||||||||| |||||    
T  13686499 aaaaaaaaatattgagggactaaagtgtagattttaacttaaga 13686542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 59
Target Start/End: Original strand, 8438189 - 8438235
Alignment:
Q  13 aatatgtattaaattttttattatattaaaatagacccgcaatacta 59  Q
    |||||||||||||  ||| ||||||||||||| ||||||||||||||    
T  8438189 aatatgtattaaaaatttgattatattaaaatggacccgcaatacta 8438235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 156
Target Start/End: Original strand, 14594608 - 14594666
Alignment:
Q  98 attattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    |||||||||||||| | |||| |||||||||||| ||||| |||||||| |||| ||||    
T  14594608 attattagaaataaaataaaaaaatattgagggactaaagcgtagatttaaacacaaga 14594666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 156
Target Start/End: Complemental strand, 37657472 - 37657430
Alignment:
Q  114 aaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    ||||| |||||||||||||||||||||| |||||||| |||||    
T  37657472 aaaaaaaatattgagggagtaaagtgtatattttaacttaaga 37657430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 276
Target Start/End: Original strand, 1199695 - 1199789
Alignment:
Q  182 cttaggggaggagagtgaannnnnnnctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagaggagagtgtaattc 276  Q
    ||||||||||| |||||||       |||| |||||||||||||||||| ||  || ||||||||||||||||| | |  ||| |||||||||||    
T  1199695 cttaggggaggggagtgaaattttttctaatatgttttgaataagaggggaggggagtgtatattttaacttaagagggaaggggagtgtaattc 1199789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 155
Target Start/End: Original strand, 15612037 - 15612070
Alignment:
Q  122 tattgagggagtaaagtgtagattttaacataag 155  Q
    |||| |||||||||||||||||||||||||||||    
T  15612037 tattaagggagtaaagtgtagattttaacataag 15612070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 156
Target Start/End: Original strand, 20540962 - 20541007
Alignment:
Q  111 ataaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    |||||||| |||||||| ||||||||||||| |||||||| |||||    
T  20540962 ataaaaaaaaatattgaaggagtaaagtgtatattttaacttaaga 20541007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 87 - 148
Target Start/End: Original strand, 1198399 - 1198456
Alignment:
Q  87 ttttttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagatttta 148  Q
    |||||||||||||||||||||||    | ||| |||||||||||| ||||||||| ||||||    
T  1198399 ttttttgctagattattagaaat----agaaaaaatattgagggattaaagtgtatatttta 1198456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 156
Target Start/End: Complemental strand, 15144609 - 15144565
Alignment:
Q  112 taaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    ||||||| | |||||||||| ||||| ||||||||||||||||||    
T  15144609 taaaaaaaattattgagggactaaagcgtagattttaacataaga 15144565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 110
Target Start/End: Original strand, 15611989 - 15612029
Alignment:
Q  70 agtgtgttaaattattattttttgctagattattagaaata 110  Q
    ||||||||| |||||  ||||||||||||||||||||||||    
T  15611989 agtgtgttagattatatttttttgctagattattagaaata 15612029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 276
Target Start/End: Original strand, 20570804 - 20570872
Alignment:
Q  208 ctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagaggagagtgtaattc 276  Q
    |||| |||||||||||||||||| ||  || ||||||||||||| ||| | | ||||||||||| ||||    
T  20570804 ctaatatgttttgaataagaggggagtggagtgtatattttaacataagaggggaggagagtgtgattc 20570872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 108 - 156
Target Start/End: Complemental strand, 37334000 - 37333952
Alignment:
Q  108 ataataaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    |||| |||||| || ||||||||||||||||||| |||||||| |||||    
T  37334000 ataaaaaaaaaaaaaattgagggagtaaagtgtatattttaacttaaga 37333952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 123; Significance: 3e-63; HSPs: 66)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 8 - 276
Target Start/End: Complemental strand, 25558 - 25286
Alignment:
Q  8 cgaagaatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnn--aagtgtgttaaattattattttttgctagattattag 105  Q
    |||| |||||||||| ||||||||||||||||||||||||||||||||||||           |||||||||||||||||||||||||||| ||||||||    
T  25558 cgaaaaatatgtattcaattttttattatattaaaatagacccgcaatactatttttttttttaagtgtgttaaattattattttttgctaaattattag 25459  T
Q  106 aaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga--nnnnnnnnatgtaattcaagcttctcttaggggaggagagtgaannn 203  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||          |||||||||||||||||||||||||||| |||||||       
T  25458 aaataataaaaaagaatattgagggagtaaagtgtagattttaatataagaggggagggagatgtaattcaagcttctcttaggggaggggagtgaaatt 25359  T
Q  204 nnnnctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagaggagagtgtaattc 276  Q
        |||| |||||||||||||||||| ||  || ||||||||||||||||| | | |||| |||||||||||    
T  25358 ttttctaatatgttttgaataagaggggaggggagtgtatattttaacttaagaggggaggggagtgtaattc 25286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 25 - 276
Target Start/End: Original strand, 25607403 - 25607656
Alignment:
Q  25 attttttattatattaaaatagacccgcaatactannnnnnnnnaagtgtgttaaattattattttttgctagattattagaaataataaaaaagaatat 124  Q
    ||||||||||||||||||||||||||||||||| |         ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25607403 attttttattatattaaaatagacccgcaataccatttttttttaagtgtgttaaattattattttttgctagattattagaaataataaaaaagaatat 25607502  T
Q  125 tgagggagtaaagtgtagattttaacataaga--nnnnnnnnatgtaattcaagcttctcttaggggaggagagtgaannnnnnnctaacatgttttgaa 222  Q
    ||||||||||||||||||||||||||||||||          |||||||||||| |||||||||| ||||||||||||       |||| ||||||||||    
T  25607503 tgagggagtaaagtgtagattttaacataagaggagagggggatgtaattcaagtttctcttaggcgaggagagtgaaaatttttctaatatgttttgaa 25607602  T
Q  223 taagagggaagaagaatgtatattttaacttaaaaagagaggagagtgtaattc 276  Q
    |||||||| ||  || ||||||||||||||||| | | |||| |||||||||||    
T  25607603 taagaggggaggggagtgtatattttaacttaagaggggaggggagtgtaattc 25607656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 13 - 276
Target Start/End: Complemental strand, 29823624 - 29823360
Alignment:
Q  13 aatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnnaagtgtgttaaattattattttttgctagattattagaaataat 112  Q
    |||||||||| ||||||||||||||||||||||||||||||||| ||         ||||||||||||||||||||||||||||||||||||||||||||    
T  29823624 aatatgtattcaattttttattatattaaaatagacccgcaataatatttttttt-aagtgtgttaaattattattttttgctagattattagaaataat 29823526  T
Q  113 aaaaaagaatattgagggagtaaagtgtagattttaacataaga--nnnnnnnnatgtaattcaagcttctcttaggggaggagagtgaannnnnnncta 210  Q
    ||||||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||| |  ||||       |||    
T  29823525 aaaaaagaatattgagggagtaaagtgtagattttaacataagaggggagggggatgtaattcaagcttctcttaggggagggggatgaaattttttcta 29823426  T
Q  211 acatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagaggagagtgtaattc 276  Q
    | || ||||||||||||||| ||  || ||||||||||||||||| | | ||||||||||||||||    
T  29823425 atatattttgaataagaggggaggggagtgtatattttaacttaagaggggaggagagtgtaattc 29823360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 8 - 276
Target Start/End: Complemental strand, 2146336 - 2146066
Alignment:
Q  8 cgaagaatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnnaagtgtgttaaattattatttttt-gctagattattaga 106  Q
    |||| |||||||||| ||||||||||||||||||||||||||||||||||||         |||||||||||||||||||||||| ||||||||||||||    
T  2146336 cgaaaaatatgtatttaattttttattatattaaaatagacccgcaatactatttttttt-aagtgtgttaaattattatttttttgctagattattaga 2146238  T
Q  107 aataataaaaaagaatattgagggagtaaagtgtagattttaacataaga--nnnnnnnnatgtaattcaagcttctcttaggggaggagagtgaannnn 204  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||          |||||||||||||||||||||||||||| |||||||        
T  2146237 aataataaaaaagaatattgaaggagtaaagtgtagattttaacataagaggggaggggaatgtaattcaagcttctcttaggggaggggagtgaaattt 2146138  T
Q  205 nnnctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagaggagagtgtaattc 276  Q
       |||| ||| |||||||||||||  || ||| ||||||||||||||||| | | |||| |||||||||||    
T  2146137 tttctaatatgatttgaataagaggagaggagagtgtatattttaacttaagaggggaggggagtgtaattc 2146066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 8 - 276
Target Start/End: Complemental strand, 317578 - 317308
Alignment:
Q  8 cgaagaatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnnaagtgtgttaaattattatttttt-gctagattattaga 106  Q
    |||| |||||||||| ||||||||||||||||||||||||| ||||||| ||         |||||||||||||||||||||||| |||| |||||||||    
T  317578 cgaaaaatatgtattcaattttttattatattaaaatagactcgcaatattatttttttt-aagtgtgttaaattattatttttttgctaaattattaga 317480  T
Q  107 aataataaaaaagaatattgagggagtaaagtgtagattttaacataaga--nnnnnnnnatgtaattcaagcttctcttaggggaggagagtgaannnn 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||| |||||||        
T  317479 aataataaaaaagaatattgagggagtaaagtgtagattttaacataagaggggagggaaatgtaattcaagcttctcttaggggaggggagtgaaattt 317380  T
Q  205 nnnctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagaggagagtgtaattc 276  Q
       |||| |||||||||||||||||| ||  || ||||||||||||||||| | | |||| |||||||||||    
T  317379 tttctaatatgttttgaataagaggggaggggagtgtatattttaacttaagaggggaggggagtgtaattc 317308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 8 - 276
Target Start/End: Complemental strand, 6184950 - 6184682
Alignment:
Q  8 cgaagaatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnnaagtgtgttaaattattattttttgctagattattagaa 107  Q
    |||| |||||||||| ||||||||||||||||||||||||||||||||||||         ||||||||||||||||||||||| |||||||||||||||    
T  6184950 cgaaaaatatgtattcaattttttattatattaaaatagacccgcaatactatttttttttaagtgtgttaaattattattttt-gctagattattagaa 6184852  T
Q  108 ataataaaaaagaatattgagggagtaaagtgtagattttaacataaga--nnnnnnnnatgtaattcaagcttctcttaggggaggagagtgaannnnn 205  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||| |||||  ||||||         
T  6184851 ataataaaaatgaatattgagggagtaaagtgtagattttaacataagaggagagggggatgtaattcaagcttctcttagaggagggaagtgaaatttt 6184752  T
Q  206 nnctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagaggagagtgtaattc 276  Q
      |||| |||||||||||||||| | ||  || ||||||||||||||| || || ||||||||||||||||    
T  6184751 ttctaatatgttttgaataagagtggaggggagtgtatattttaactt-aagagggaggagagtgtaattc 6184682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 8 - 276
Target Start/End: Original strand, 38670456 - 38670728
Alignment:
Q  8 cgaagaatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnn--aagtgtgttaaattattattttttgctagattattag 105  Q
    |||| |||||||||| ||||||||||||||||||||||||||||||||||||           |||||||||||||||||||||||||||||||||||||    
T  38670456 cgaaaaatatgtattcaattttttattatattaaaatagacccgcaatactatttttttttttaagtgtgttaaattattattttttgctagattattag 38670555  T
Q  106 aaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga--nnnnnnnnatgtaattcaagcttctcttaggggaggagagtgaannn 203  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||          ||||||||||| ||||||||||| ||||||||||||       
T  38670556 aaataataaaaatgaatattgagggagtaaagtgtagattttaacataagaggggagggggatgtaattcaaccttctcttaggagaggagagtgaaatt 38670655  T
Q  204 nnnnctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagaggagagtgtaattc 276  Q
        |||| |||||||||| ||||||| ||   | ||||||||||||||||| | | |||| |||||||||||    
T  38670656 ttttctaatatgttttgaaaaagaggggagggtagtgtatattttaacttaagaggggaggggagtgtaattc 38670728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 15 - 276
Target Start/End: Complemental strand, 40344049 - 40343788
Alignment:
Q  15 tatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnnaagtgtgttaaattattattttttgctagattattagaaataataa 114  Q
    |||||||| ||||||||||||||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||||||||||||||||    
T  40344049 tatgtattcaattttttattatattaaaatagacccgcaatactatttttttt-aagtgtgttaaattattattttttgctagattattagaaataataa 40343951  T
Q  115 aaaagaatattgagggagtaaagtgtagattttaacataaga--nnnnnnnnatgtaattcaagcttctcttaggggaggagagtgaannnnnnnctaac 212  Q
    ||||||||||||||||||||||||||||||||||||||||||          ||||||||||||| | |||||||||||| |||||||       ||||     
T  40343950 aaaagaatattgagggagtaaagtgtagattttaacataagaggggagggggatgtaattcaagcat-tcttaggggaggcgagtgaaattttttctaat 40343852  T
Q  213 atgttttgaataagagggaagaagaatgtatattttaacttaaaaagagaggagagtgtaattc 276  Q
      |||||||||||||||| ||  || ||||||||||||||||| | |  ||| |||||||||||    
T  40343851 tagttttgaataagaggggaggggagtgtatattttaacttaagagggaaggggagtgtaattc 40343788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 8 - 276
Target Start/End: Original strand, 5228420 - 5228683
Alignment:
Q  8 cgaagaatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnnaagtgtgttaaattattatttttt-gctagattattaga 106  Q
    |||| |||||||||| ||||||||||||||||||||||||||||||||||||         |||||||||||||||||||||||| |||| |||||||||    
T  5228420 cgaaaaatatgtattcaattttttattatattaaaatagacccgcaatactatttttttttaagtgtgttaaattattatttttttgctaaattattaga 5228519  T
Q  107 aataataaaaaagaatattgagggagtaaagtgtagattttaacataagannnnnnnn--atgtaattcaagcttctcttaggggaggagagtgaannnn 204  Q
    || ||        |||||||||||||||||||||||||||||||||||||          ||||||||||||||||||||| |||| | |||||||        
T  5228520 aaaaa--------aatattgagggagtaaagtgtagattttaacataagaagggaggagaatgtaattcaagcttctcttaagggaagggagtgaaaagt 5228611  T
Q  205 nnnctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagaggagagtgtaattc 276  Q
       |||| |||||||||||||||||| ||  || ||||||||||||| ||||| | ||||||||||||||||    
T  5228612 attctaatatgttttgaataagaggggaggggagtgtatattttaacataaaaggggaggagagtgtaattc 5228683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 8 - 251
Target Start/End: Complemental strand, 5951950 - 5951706
Alignment:
Q  8 cgaagaatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnnaagtgtgttaaattattatt-ttttgctagattattaga 106  Q
    |||| |||||||||| || |||| ||||||||||||||||||||||||||||         | |||||||||||||||||| |||||||| |||||||||    
T  5951950 cgaaaaatatgtattcaaattttgattatattaaaatagacccgcaatactattttttccgatgtgtgttaaattattattattttgctatattattaga 5951851  T
Q  107 aataataaaaaagaatattgagggagtaaagtgtagattttaacata--agannnnnnnnatgtaattcaagcttctcttaggggaggagagtgaannnn 204  Q
    ||||| | ||||  ||||||| |||||||| ||||||||||||||||  |||        |||||||||||||||||||||||||||| ||| |||        
T  5951850 aataaaataaaaatatattgaaggagtaaaatgtagattttaacataagagaagaagaaaatgtaattcaagcttctcttaggggaggggagagaaatgt 5951751  T
Q  205 nnnctaacatgttttgaataagagggaagaagaatgtatattttaac 251  Q
       |||| |||||||||||  ||||| |||| | |||||||||||||    
T  5951750 tttctaatatgttttgaat--gaggggagaaaagtgtatattttaac 5951706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 8 - 200
Target Start/End: Original strand, 32867676 - 32867871
Alignment:
Q  8 cgaagaatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnnaagtgtgttaaattattatttttt-gctagattattaga 106  Q
    |||| |||||||||| ||||||| |||||| |||||||||||| ||||||||         |||||||||| ||||||||||||| |||||||||||| |    
T  32867676 cgaaaaatatgtattcaattttt-attatactaaaatagacccacaatactattttttcg-aagtgtgttagattattatttttttgctagattattaaa 32867773  T
Q  107 aataa--taaaaaagaatattgagggagtaaagtgtagattttaacata--agannnnnnnnatgtaattcaagcttctcttaggggaggagagtgaa 200  Q
    |||||  ||||||| ||||||||||||||||||||||||||||||||||  |||        |||||||||||||||||||||||||||| |||||||    
T  32867774 aataaaataaaaaataatattgagggagtaaagtgtagattttaacataagagaggaggggaatgtaattcaagcttctcttaggggaggggagtgaa 32867871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 8 - 251
Target Start/End: Original strand, 23742437 - 23742678
Alignment:
Q  8 cgaagaatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnnaagtgtgttaaattattatt--ttttgctagattattag 105  Q
    |||| |||||||||| |||||||||||||||||||||||||||  ||||| |         |||||||||| |||||||||  |||||||||||||||||    
T  23742437 cgaaaaatatgtattcaattttttattatattaaaatagacccataatacaatttttttcgaagtgtgttagattattattatttttgctagattattag 23742536  T
Q  106 aaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga--nnnnnnnnatgtaattcaagcttctcttaggggaggagagtgaannn 203  Q
    |||||| ||||     |||||||||||||||||||||||||||  ||||||          ||||||||||||||||||| |||||||| | |||||       
T  23742537 aaataaaaaaa-----tattgagggagtaaagtgtagattttattataagaggggagaagaatgtaattcaagcttctctgaggggagg-gggtgaaaaa 23742630  T
Q  204 nnnnctaacatgttttgaataagagggaagaagaatgtatattttaac 251  Q
        |||| |||||||||||||||||| ||| || |||||||||||||    
T  23742631 ttttctaatatgttttgaataagaggggagatgattgtatattttaac 23742678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 13 - 275
Target Start/End: Complemental strand, 27144479 - 27144212
Alignment:
Q  13 aatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnn-aagtgtgttaaattattatttttt-gctagattattagaaata 110  Q
    |||||||||| ||||||| ||||||||||||||||||| ||||||||          |||||||||| ||||||||||||| |||||||||||| |||||    
T  27144479 aatatgtattcaattttt-attatattaaaatagacccacaatactattttttttcgaagtgtgttagattattatttttttgctagattattaaaaata 27144381  T
Q  111 a--taaaaaagaatattgagggagtaaagtgtagattttaacataaga--nnnnnnnnatgtaattcaagcttctcttaggggaggagagtgaannnnnn 206  Q
    |  ||||||  |||||||||||| ||||||||||||||||||||||||          |||||||||||| ||||||||| ||||| |||||||          
T  27144380 aaataaaaattaatattgagggaataaagtgtagattttaacataagaggggatgggaatgtaattcaagattctcttagcggaggggagtgaaaaaaat 27144281  T
Q  207 nctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagaggagagtgtaatt 275  Q
     | || | |||||||||||||||| ||  || ||||||||||||| ||| | | |||| ||||||||||    
T  27144280 tcaaataagttttgaataagaggggaggggagtgtatattttaacataagaggggaggggagtgtaatt 27144212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 8 - 190
Target Start/End: Complemental strand, 1573383 - 1573201
Alignment:
Q  8 cgaagaatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnnaagtgtgttaaattattatt--ttttgctagattattag 105  Q
    |||| |||||||||| |||||||||||||||||||||| ||||| ||||| |         || ||||||| |||| ||||  |||||||||||||||||    
T  1573383 cgaaaaatatgtattcaattttttattatattaaaataaacccgtaatacaatttttttcgaaatgtgttagattactattatttttgctagattattag 1573284  T
Q  106 aaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga--nnnnnnnnatgtaattcaagcttctcttagggga 190  Q
    |||||| |||||    |||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||    
T  1573283 aaataaaaaaaa----tattgagggagtaaagtgtagattttaacataagaggggagtggaatgtaattcaagcttctcttagggga 1573201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 8 - 230
Target Start/End: Original strand, 39186671 - 39186894
Alignment:
Q  8 cgaagaatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnnaagtgtgttaaattattatt-ttttgctagattattaga 106  Q
    |||| |||||||||| ||||||||||| |||||||||||||||| |||||||         |||||||||| ||||||||| |||| |||||||||| ||    
T  39186671 cgaaaaatatgtatttaattttttattctattaaaatagacccgtaatactattttttct-aagtgtgttagattattattatttttctagattatttga 39186769  T
Q  107 aataataaaaaagaatattgagggagtaaagtgtagattttaacataa-gannnnnnnnatgtaattcaagcttctc-ttaggggaggagagtgaannnn 204  Q
    ||| | |||| | | ||||||||||||||||||||||||||||||||| |         |||||||||||||||||| |||||||||| |||||||        
T  39186770 aattagaaaatata-tattgagggagtaaagtgtagattttaacataagggggaggggaatgtaattcaagcttctctttaggggaggtgagtgaatttt 39186868  T
Q  205 nnnctaacatgttttgaataagaggg 230  Q
       |||| ||||||||||||||||||    
T  39186869 tttctaatatgttttgaataagaggg 39186894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 69 - 155
Target Start/End: Complemental strand, 28308237 - 28308150
Alignment:
Q  69 aagtgtgttaaattattatt-ttttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataag 155  Q
    |||||||||| ||||||||| ||||||||||||||||||||||| |||||| || ||||| |||||||||||||||||||||||||||    
T  28308237 aagtgtgttagattattattattttgctagattattagaaataaaaaaaaaaaacattgatggagtaaagtgtagattttaacataag 28308150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 72 - 276
Target Start/End: Original strand, 30870419 - 30870623
Alignment:
Q  72 tgtgttaaattattattttttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga--nnnnnnnnatgta 169  Q
    ||||||| ||| || ||||||| |||||||||||||||  ||||||| ||||||||||||||||| |||||||||||||||||||          |||||    
T  30870419 tgtgttagattttttttttttgttagattattagaaat--taaaaaataatattgagggagtaaaatgtagattttaacataagaagggaaggaaatgta 30870516  T
Q  170 attcaagcttctcttaggggaggagagtgaannnnnnnctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagaggagagt 269  Q
    |||||||||||||||||||||||  ||||||       |||| || ||||||||||||| | ||  || ||||||||||||| ||| ||  |||||| ||    
T  30870517 attcaagcttctcttaggggagggaagtgaaatattttctaaaatattttgaataagagaggaggggagtgtatattttaacctaagaaaggaggagcgt 30870616  T
Q  270 gtaattc 276  Q
    |||||||    
T  30870617 gtaattc 30870623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 16 - 276
Target Start/End: Complemental strand, 34999475 - 34999215
Alignment:
Q  16 atgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnn-aagtgtgttaaattattatt-ttttgctagattattagaaataata 113  Q
    ||||||| |||||||||||||||||||||||||| |||||| ||          |||||||||| | ||||||| |||| |||||||||||||||||| |    
T  34999475 atgtattcaattttttattatattaaaatagacctgcaataatattttttcccgaagtgtgttagactattattatttttctagattattagaaataaaa 34999376  T
Q  114 aaaaagaatattgagggagtaaagtgtagattttaacataa-gannnnnnnnatgtaattcaagcttctcttaggggaggagagtgaannnnnnnctaac 212  Q
    |  ||  |||||||||||||||||||||||||||||||||| |         ||||||||||||||||||||| |||||| |||||||        |||     
T  34999375 agtaa--atattgagggagtaaagtgtagattttaacataagggggagggggatgtaattcaagcttctcttaagggagg-gagtgaaaaagtttttaat 34999279  T
Q  213 atgttttgaataagagggaagaagaatgtatattttaacttaaaaagagaggagagtgtaattc 276  Q
    |||| ||||||||||||| ||  || ||||||||||||| ||| | | |||| |||||||||||    
T  34999278 atgtgttgaataagaggggaggggagtgtatattttaacataagaggggaggggagtgtaattc 34999215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 69 - 200
Target Start/End: Complemental strand, 29103758 - 29103627
Alignment:
Q  69 aagtgtgttaaattattattttttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga--nnnnnnnnat 166  Q
    ||||||||||||||| | ||||||||| |||| |||||||||| |||||| |||||||||||||||||||||||||||||||| ||||          ||    
T  29103758 aagtgtgttaaattaat-ttttttgcttgattgttagaaataaaaaaaaa-aatattgagggagtaaagtgtagattttaacacaagaggggaggagaat 29103661  T
Q  167 gtaattcaagcttctcttaggggaggagagtgaa 200  Q
     ||||||||||||||||||||||||| |||||||    
T  29103660 ataattcaagcttctcttaggggaggggagtgaa 29103627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 13 - 156
Target Start/End: Original strand, 23728217 - 23728359
Alignment:
Q  13 aatatgtattaaattttttattatattaaaatagacccgc----aatactannnnnnnnnaagtgtgttaaattattatttttt-gctagattattagaa 107  Q
    |||||||||| |||||||||||||||||||||||||| ||    |||| ||         |||||||||| ||||||||||||| |||||||||||||||    
T  23728217 aatatgtatttaattttttattatattaaaatagacctgcaattaatattaatttttttgaagtgtgttagattattattttttggctagattattagaa 23728316  T
Q  108 ataataaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    |||| ||||      ||||||||||||||||||||||||||||||||||    
T  23728317 ataaaaaaa------attgagggagtaaagtgtagattttaacataaga 23728359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 69 - 156
Target Start/End: Original strand, 29736632 - 29736716
Alignment:
Q  69 aagtgtgttaaattattatt-ttttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    ||||||| |||||||||||| ||||||||||||||||||||||| |||||    |||||||||| ||||||||||||||||||||||||    
T  29736632 aagtgtgctaaattattattgttttgctagattattagaaataaaaaaaa----tattgagggactaaagtgtagattttaacataaga 29736716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 75 - 156
Target Start/End: Complemental strand, 33869422 - 33869342
Alignment:
Q  75 gttaaattattattttttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    |||| |||||| ||||| | ||||||||||||||||| | |||| |||||||||||||||||||||||||||||||||||||    
T  33869422 gttagattattttttttggatagattattagaaataaaataaaa-aatattgagggagtaaagtgtagattttaacataaga 33869342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 13 - 156
Target Start/End: Original strand, 2790718 - 2790858
Alignment:
Q  13 aatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnnaagtgtgttaaattatta-ttttttgctagattattagaaataa 111  Q
    |||||||||| |||||||||||||||| ||||||||| |||||||||         |||||||||| ||||| | |||||||| ||||||||| ||||      
T  2790718 aatatgtatttaattttttattatattcaaatagacctgcaatactatttttttggaagtgtgttagattataatttttttgcaagattattataaat-- 2790815  T
Q  112 taaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
      ||| | ||||||| ||||||||||||| |||||||||||||||    
T  2790816 --aaataaaatattgtgggagtaaagtgtggattttaacataaga 2790858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 83 - 251
Target Start/End: Complemental strand, 43450326 - 43450154
Alignment:
Q  83 attatttttt-gctagattattagaaataa-taaaaaagaatattgagggagtaaagtgtagattttaacataaga--nnnnnnnnatgtaattcaagct 178  Q
    |||||||||| ||||||||||||||||||| ||||||| |||||||||||| ||||| ||||||||||||||||||          ||||||||||||||    
T  43450326 attattttttagctagattattagaaataaataaaaaaaaatattgagggactaaagcgtagattttaacataagaggggaggggaatgtaattcaagct 43450227  T
Q  179 tctcttaggggaggagagtgaannnnnnnctaacatgttttgaataagagggaagaagaatgtatattttaac 251  Q
    ||||| | |||||  |||||||       | || ||||||||||||| || | || |||||||||||||||||    
T  43450226 tctctcaagggagaggagtgaaatattttccaatatgttttgaataaaagaggaggagaatgtatattttaac 43450154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 80 - 156
Target Start/End: Complemental strand, 3341002 - 3340925
Alignment:
Q  80 attattatttttt--gctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    |||||||||||||  ||||||| ||||||||||| | |||| |||||||||||||||||||||||||||||||||||||    
T  3341002 attattatttttttggctagatcattagaaataaaataaaa-aatattgagggagtaaagtgtagattttaacataaga 3340925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 87 - 276
Target Start/End: Complemental strand, 40401119 - 40400932
Alignment:
Q  87 ttttttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga--nnnnnnnnatgtaattcaagcttctctt 184  Q
    ||||||||||||||||||||||||| |||||    ||| ||||||||||||| |||||||||||||||||          | ||||||||||||| | |     
T  40401119 ttttttgctagattattagaaataaaaaaaa----tatcgagggagtaaagtatagattttaacataagaggggaggggaacgtaattcaagcttttgtc 40401024  T
Q  185 aggggaggagagtgaannnnnnnctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagaggagagtgtaattc 276  Q
    | |||||| |||||||       |||| |||||||||||||||||| ||| || ||||||||||||| ||| | | || |||||||||||||    
T  40401023 aagggaggggagtgaaaaaatttctaatatgttttgaataagaggggagaggagtgtatattttaacataagaggggatgagagtgtaattc 40400932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 69 - 156
Target Start/End: Original strand, 19435131 - 19435216
Alignment:
Q  69 aagtgtgttaaattattattttttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    |||||||||| | |||| |||||| |||||||||||||||||| | |||| | |||||||||||||| ||||||||||||||||||||    
T  19435131 aagtgtgttagactattttttttt-ctagattattagaaataaaataaaa-attattgagggagtaatgtgtagattttaacataaga 19435216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 8 - 59
Target Start/End: Complemental strand, 26200109 - 26200058
Alignment:
Q  8 cgaagaatatgtattaaattttttattatattaaaatagacccgcaatacta 59  Q
    |||| |||||||||| ||||||||||||||||||||||||||||||||||||    
T  26200109 cgaaaaatatgtattgaattttttattatattaaaatagacccgcaatacta 26200058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 13 - 156
Target Start/End: Complemental strand, 14078650 - 14078508
Alignment:
Q  13 aatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnn-aagtgtgttaaattattatt-ttttgctagattattagaaata 110  Q
    |||||||||| || ||||  |||||||||||||||||||||||| ||          |||||||||| ||||||||| |||||  ||||||||| |||||    
T  14078650 aatatgtattcaaattttggttatattaaaatagacccgcaatattatttgtttttgaagtgtgttagattattattattttgtgagattattaaaaata 14078551  T
Q  111 ataaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    |  ||||    |||||||||||||||||||||||||||||||||||    
T  14078550 aataaaat---tattgagggagtaaagtgtagattttaacataaga 14078508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 13 - 156
Target Start/End: Complemental strand, 14388678 - 14388536
Alignment:
Q  13 aatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnn-aagtgtgttaaattattatt-ttttgctagattattagaaata 110  Q
    |||||||||| || ||||  |||||||||||||||||||||||| ||          |||||||||| ||||||||| |||||  ||||||||| |||||    
T  14388678 aatatgtattcaaattttggttatattaaaatagacccgcaatattatttgtttttgaagtgtgttagattattattattttgtgagattattaaaaata 14388579  T
Q  111 ataaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    |  ||||    |||||||||||||||||||||||||||||||||||    
T  14388578 aataaaat---tattgagggagtaaagtgtagattttaacataaga 14388536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 89 - 156
Target Start/End: Complemental strand, 20261221 - 20261156
Alignment:
Q  89 ttttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    ||||||||||||||||||| ||| ||||||  ||||||||||||||||| |||||||||||| |||||    
T  20261221 ttttgctagattattagaagtaaaaaaaaa--atattgagggagtaaagagtagattttaacgtaaga 20261156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 72 - 250
Target Start/End: Original strand, 29616059 - 29616236
Alignment:
Q  72 tgtgttaaattattattttttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataagannnnnnnn----atg 167  Q
    ||||||| ||| ||||||||| |||||||||||||||||| ||||     |||||||||||||||| |||||||||||||| |||            |||    
T  29616059 tgtgttagattgttattttttactagattattagaaataaaaaaa-----tattgagggagtaaagagtagattttaacatgagaggggaggtgaatatg 29616153  T
Q  168 taattcaagcttctcttaggggaggagagtgaannnnnnnctaacatgttttgaataagagggaagaagaatgtatattttaa 250  Q
    ||| |||||| |||||||||||||| |||||||       |||| ||| |||||||||||||| ||| || | ||||||||||    
T  29616154 taactcaagcatctcttaggggaggggagtgaaagtttttctaatatgatttgaataagaggggagaggattatatattttaa 29616236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 70 - 200
Target Start/End: Original strand, 32387987 - 32388116
Alignment:
Q  70 agtgtgttaaattattatttttt--gctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga--nnnnnnnna 165  Q
    ||||||||| |||||||||||||  || |||||||||||||||| ||||     |||||||||||||||| ||| ||||||||||||||          |    
T  32387987 agtgtgttagattattattttttttgcaagattattagaaataaaaaaa-----tattgagggagtaaagcgtatattttaacataagaggagaagagaa 32388081  T
Q  166 tgtaattcaagcttctcttaggggaggagagtgaa 200  Q
    |||||||||| ||||||| ||||||||||||||||    
T  32388082 tgtaattcaaacttctctcaggggaggagagtgaa 32388116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 69 - 156
Target Start/End: Complemental strand, 31872695 - 31872608
Alignment:
Q  69 aagtgtgttaaattattattttttgctagattattagaaataataaaaaagaa--tattgagggagtaaagtgtagattttaacataaga 156  Q
    |||||||||| ||||||  |||||||||||||||||||| ||| |||||| ||  ||||||| |||||||  ||||||||||||||||||    
T  31872695 aagtgtgttagattatt--tttttgctagattattagaagtaaaaaaaaaaaaaatattgagtgagtaaatagtagattttaacataaga 31872608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 87 - 156
Target Start/End: Original strand, 22712156 - 22712226
Alignment:
Q  87 ttttttgctagattattagaaataa-taaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    |||||||||||||||||| |||||| ||||||| | |||||||||| ||||| |||||||||||| |||||    
T  22712156 ttttttgctagattattataaataaataaaaaaaattattgagggactaaagcgtagattttaacttaaga 22712226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 87 - 276
Target Start/End: Original strand, 42813430 - 42813623
Alignment:
Q  87 ttttttgctagattattagaaataataaaaaagaa--tattgagggagtaaagtgtagattttaacataaga--nnnnnnnnatgtaattcaagcttctc 182  Q
    |||||||||||||||||||||||  ||||||| ||  |||||||||| ||||| || ||||||||| |||||          ||||||||||||||||||    
T  42813430 ttttttgctagattattagaaattttaaaaaaaaaattattgagggactaaagagtggattttaacttaagaggggaggggaatgtaattcaagcttctc 42813529  T
Q  183 ttaggggaggagagtgaannnnnnnctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagaggagagtgtaattc 276  Q
    | | |||||| ||| |||       |||| |||||||||||||||||| || | | ||||||||||||| ||| |   |||| |||||||||||    
T  42813530 tcaagggaggggagggaaatgttttctaatatgttttgaataagaggggaggaaagtgtatattttaacataagagaggaggggagtgtaattc 42813623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 165 - 275
Target Start/End: Original strand, 11640913 - 11641023
Alignment:
Q  165 atgtaattcaagcttctcttaggggaggagagtgaannnnnnnctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagagg 264  Q
    ||||||||||||||||| | | |||||| |||||||       |||| |||||||||||||||||| |||| | ||||||| ||||| ||||| | ||||    
T  11640913 atgtaattcaagcttctttcaagggaggggagtgaaatattttctaatatgttttgaataagaggggagaaaagtgtatatattaacataaaaggggagg 11641012  T
Q  265 agagtgtaatt 275  Q
     ||||||||||    
T  11641013 ggagtgtaatt 11641023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 87 - 156
Target Start/End: Complemental strand, 22263983 - 22263915
Alignment:
Q  87 ttttttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    ||||||||||||||  ||||||||| |||||| | ||||||||| |||||| ||||||||||||||||||    
T  22263983 ttttttgctagatttgtagaaataaaaaaaaa-attattgagggtgtaaagcgtagattttaacataaga 22263915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 83 - 156
Target Start/End: Complemental strand, 8122849 - 8122779
Alignment:
Q  83 attattttttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    ||||||||||||||||||||||||||||| || | |   |||||||||| ||||| |||||||||||| |||||    
T  8122849 attattttttgctagattattagaaataaaaatata---tattgagggactaaagcgtagattttaacttaaga 8122779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 69 - 156
Target Start/End: Original strand, 19155840 - 19155925
Alignment:
Q  69 aagtgtgttaaattattattttttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    ||||||||| ||||||| || ||| ||||||| |||||||||| |||||| | |||||||||| ||| | ||||||||||||||||||    
T  19155840 aagtgtgtttaattatt-ttatttcctagattgttagaaataa-aaaaaatattattgagggactaaggcgtagattttaacataaga 19155925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 69 - 156
Target Start/End: Original strand, 20755239 - 20755324
Alignment:
Q  69 aagtgtgttaaattattattttttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    ||||||||| ||||||| || ||| ||||||| |||||||||| |||||| | |||||||||| ||| | ||||||||||||||||||    
T  20755239 aagtgtgtttaattatt-ttatttcctagattgttagaaataa-aaaaaatattattgagggactaaggcgtagattttaacataaga 20755324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 69 - 156
Target Start/End: Original strand, 36889922 - 36890006
Alignment:
Q  69 aagtgtgttaaattattatttttt-gctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    |||| ||||| ||||||||||||| | |||| |||||||||||| |||||    |||||||||| ||| ||||||||||||||||||||    
T  36889922 aagtatgttagattattatttttttgttagaatattagaaataaaaaaaa----tattgagggattaatgtgtagattttaacataaga 36890006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 69 - 156
Target Start/End: Original strand, 48872517 - 48872599
Alignment:
Q  69 aagtgtgttaaattattattttttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    |||||||||| ||||||  |||||||||||||| ||||||||| |||||    |||||||||| ||||| |||||||||||| |||||    
T  48872517 aagtgtgttatattatt--tttttgctagattactagaaataaaaaaaat---tattgagggactaaagcgtagattttaacttaaga 48872599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 69 - 156
Target Start/End: Original strand, 48891282 - 48891367
Alignment:
Q  69 aagtgtgttaaattattatttttt-gctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    |||||||||| ||||||||||||| |||||||||||||||||||   |||  | |||| | ||| |||||| |||||||||||||||||    
T  48891282 aagtgtgttagattattatttttttgctagattattagaaataa---aaattattattaatggattaaagtatagattttaacataaga 48891367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 111 - 156
Target Start/End: Original strand, 2146855 - 2146900
Alignment:
Q  111 ataaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    |||||||| |||||||||||||||||||||| |||||||| |||||    
T  2146855 ataaaaaaaaatattgagggagtaaagtgtatattttaacttaaga 2146900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 108 - 156
Target Start/End: Original strand, 317935 - 317983
Alignment:
Q  108 ataataaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    |||| |||||| |||||||||||||||||||||| |||||||| |||||    
T  317935 ataaaaaaaaaaaatattgagggagtaaagtgtatattttaacttaaga 317983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 113 - 275
Target Start/End: Original strand, 11696751 - 11696914
Alignment:
Q  113 aaaaaagaatattgagggagtaaagtgtagattttaacataagannnnnnnn--atgtaattcaagcttctcttaggggaggagagtgaannnnnnncta 210  Q
    |||||| ||||||||||||||| || ||| ||||||||||||||          ||||||||||||||||||||| ||| ||||||||||       |||    
T  11696751 aaaaaaaaatattgagggagtacagcgtacattttaacataagaggggtgaggaatgtaattcaagcttctcttaaggggggagagtgaaatattttcta 11696850  T
Q  211 acatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagaggagagtgtaatt 275  Q
    | | |||||||||||||||| ||  || |||||  |||||| ||| | ||||| |||||||||||    
T  11696851 ataagttttgaataagaggggaggggagtgtat-gtttaacctaagatgagagaagagtgtaatt 11696914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 156
Target Start/End: Complemental strand, 36687532 - 36687448
Alignment:
Q  69 aagtgtgttaaattattattttttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    |||||||||| ||||||  |||||||| |||||||| ||||||  ||||| | |||||||||| ||||| |||||||||||| |||||    
T  36687532 aagtgtgttagattatt--tttttgctggattattataaataaataaaaa-attattgagggactaaagcgtagattttaacttaaga 36687448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 13 - 59
Target Start/End: Original strand, 45941903 - 45941950
Alignment:
Q  13 aatatgtattaaattttt-tattatattaaaatagacccgcaatacta 59  Q
    |||||||||| ||||||| ||||||||||||||||||||| |||||||    
T  45941903 aatatgtattcaatttttgtattatattaaaatagacccgtaatacta 45941950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 87 - 156
Target Start/End: Complemental strand, 46010669 - 46010603
Alignment:
Q  87 ttttttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    |||||||||||| |||||||||||| ||||||   |||||||||| ||||| || ||||||||| |||||    
T  46010669 ttttttgctagactattagaaataaaaaaaaa---tattgagggactaaagcgtggattttaacttaaga 46010603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 156
Target Start/End: Complemental strand, 25607015 - 25606973
Alignment:
Q  114 aaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    ||||| |||||||||||||||||||||| |||||||| |||||    
T  25607015 aaaaaaaatattgagggagtaaagtgtatattttaacttaaga 25606973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 156
Target Start/End: Original strand, 29824013 - 29824055
Alignment:
Q  114 aaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    ||||| |||||||||||||||||||||| |||||||| |||||    
T  29824013 aaaaaaaatattgagggagtaaagtgtatattttaacttaaga 29824055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 95 - 156
Target Start/End: Complemental strand, 31221009 - 31220950
Alignment:
Q  95 tagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    ||||||||||||||||| ||||||   ||||||||||||||| |||||||| ||| ||||||    
T  31221009 tagattattagaaataaaaaaaaat--tattgagggagtaaactgtagattataatataaga 31220950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 228
Target Start/End: Original strand, 40189001 - 40189064
Alignment:
Q  165 atgtaattcaagcttctcttaggggaggagagtgaannnnnnnctaacatgttttgaataagag 228  Q
    |||| |||||||||||||||||||| ||||||||||       |||| ||||||||||||||||    
T  40189001 atgtcattcaagcttctcttaggggtggagagtgaaatgttttctaatatgttttgaataagag 40189064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 276
Target Start/End: Original strand, 48982472 - 48982583
Alignment:
Q  165 atgtaattcaagcttctcttaggggaggagagtgaannnnnnnctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagagg 264  Q
    ||||||||||||||||||| | | |||| |||||||       |||| |||||||||||||||||| ||  || ||||||||||||| ||| | | ||||    
T  48982472 atgtaattcaagcttctctcaagagaggggagtgaaatattttctaatatgttttgaataagaggggaggggagtgtatattttaacataagaggggagg 48982571  T
Q  265 agagtgtaattc 276  Q
      ||||||||||    
T  48982572 gaagtgtaattc 48982583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 198
Target Start/End: Original strand, 31388165 - 31388198
Alignment:
Q  165 atgtaattcaagcttctcttaggggaggagagtg 198  Q
    |||||||||||||||||||||||| |||||||||    
T  31388165 atgtaattcaagcttctcttagggaaggagagtg 31388198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 154
Target Start/End: Original strand, 34835313 - 34835394
Alignment:
Q  69 aagtgtgttaaattatta-ttttttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataa 154  Q
    |||||||||| ||||||| |||||||||||| ||||||||||  |||||||  |||||    |||||||||||||||||||| ||||    
T  34835313 aagtgtgttagattattatttttttgctagactattagaaattttaaaaaa-tatatt----gagtaaagtgtagattttaaaataa 34835394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 156
Target Start/End: Complemental strand, 35783602 - 35783514
Alignment:
Q  70 agtgtgttaaattattattttttgctagattattagaaataataaaaaagaa--tattgagggagtaaagtgtagattttaacataaga 156  Q
    ||||||||  ||| || ||||||| || |||| ||||||||| |||||| ||  |||| |||||| ||| |||||||||||||||||||    
T  35783602 agtgtgttcgatttttcttttttgataaattactagaaataaaaaaaaaaaacttattaagggaggaaattgtagattttaacataaga 35783514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 87 - 149
Target Start/End: Original strand, 8535321 - 8535380
Alignment:
Q  87 ttttttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaa 149  Q
    |||||||||||||| |||||||||| |||||    |||||||||| ||||| |||||||||||    
T  8535321 ttttttgctagatttttagaaataaaaaaaac---tattgagggactaaagcgtagattttaa 8535380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 276
Target Start/End: Original strand, 8535410 - 8535478
Alignment:
Q  208 ctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagaggagagtgtaattc 276  Q
    |||| |||||||||||||||||| ||  || | ||||||||||| ||||| | |||| |||||||||||    
T  8535410 ctaatatgttttgaataagaggggagtggagtatatattttaacataaaaggggaggggagtgtaattc 8535478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 226
Target Start/End: Original strand, 10410716 - 10410777
Alignment:
Q  165 atgtaattcaagcttctcttaggggaggagagtgaannnnnnnctaacatgttttgaataag 226  Q
    ||||||||||| |||||||||||| |||||||||||       |||| ||||||||||||||    
T  10410716 atgtaattcaaacttctcttagggtaggagagtgaaatggtttctaatatgttttgaataag 10410777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 156
Target Start/End: Original strand, 23233377 - 23233413
Alignment:
Q  120 aatattgagggagtaaagtgtagattttaacataaga 156  Q
    ||||||||||||||||| | |||||||||||||||||    
T  23233377 aatattgagggagtaaaatatagattttaacataaga 23233413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 156
Target Start/End: Original strand, 23243038 - 23243074
Alignment:
Q  120 aatattgagggagtaaagtgtagattttaacataaga 156  Q
    ||||||||||||||||| | |||||||||||||||||    
T  23243038 aatattgagggagtaaaatatagattttaacataaga 23243074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 154
Target Start/End: Original strand, 38790629 - 38790661
Alignment:
Q  122 tattgagggagtaaagtgtagattttaacataa 154  Q
    |||||||||||||||| ||||||||||||||||    
T  38790629 tattgagggagtaaagcgtagattttaacataa 38790661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 15 - 59
Target Start/End: Complemental strand, 40189247 - 40189203
Alignment:
Q  15 tatgtattaaattttttattatattaaaatagacccgcaatacta 59  Q
    |||||||| || |||| |||||| |||||||||||||||||||||    
T  40189247 tatgtattcaaattttaattatactaaaatagacccgcaatacta 40189203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 87 - 156
Target Start/End: Original strand, 46208730 - 46208795
Alignment:
Q  87 ttttttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    ||||||| |||||||||| |||||| |||||    ||||||||  || ||||||||||||||||||||||    
T  46208730 ttttttggtagattattaaaaataaaaaaaa----tattgaggatgtgaagtgtagattttaacataaga 46208795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2113 (Bit Score: 116; Significance: 5e-59; HSPs: 1)
Name: scaffold2113
Description:

Target: scaffold2113; HSP #1
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 8 - 276
Target Start/End: Complemental strand, 1025 - 756
Alignment:
Q  8 cgaagaatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnnaagtgtgttaaattattattttttgctagattattagaa 107  Q
    |||| |||||||||| ||||||||||||||||||||||||||||||||| ||         |||||||||||||||||||||||||||||||||||||||    
T  1025 cgaaaaatatgtattcaattttttattatattaaaatagacccgcaataatatttttttttaagtgtgttaaattattattttttgctagattattagaa 926  T
Q  108 ataataaaaaagaatattgagggagtaaagtgtagattttaacataaga--nnnnnnnnatgtaattcaagcttctcttaggggaggagagtgaannnnn 205  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||           ||||||||||||||||||||||||||| | |||||         
T  925 ataataaaaaagaatattgagggactaaagtgtagattttaacataagaggggaggggggtgtaattcaagcttctcttaggggagg-gggtgaaatttt 827  T
Q  206 nnctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagaggagagtgtaattc 276  Q
      |||| |||||||||||||||||| ||  || ||||||||||||||||| |   |||| |||||||||||    
T  826 ttctaatatgttttgaataagaggggaggggagtgtatattttaacttaagagtggaggggagtgtaattc 756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 100; Significance: 2e-49; HSPs: 3)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 8 - 230
Target Start/End: Complemental strand, 32983 - 32757
Alignment:
Q  8 cgaagaatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnn-aagtgtgttaaattattatttttt-gctagattattag 105  Q
    |||| |||||||||| |||||||||||||| |||||||||||||||||||||          |||||||||||||||||||||||| |||||||||||||    
T  32983 cgaaaaatatgtattcaattttttattatactaaaatagacccgcaatactattttttttttaagtgtgttaaattattatttttttgctagattattag 32884  T
Q  106 aaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga--nnnnnnnnatgtaattcaagcttctcttaggggaggagagtgaannn 203  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||          |||||||||||||||||||||||||||| || ||||       
T  32883 aaataataaaaaagaatattgacggagtaaagtgtagattttaacataagaggggagggagatgtaattcaagcttctcttaggggaggggaatgaaatt 32784  T
Q  204 nnnnctaacatgttttgaataagaggg 230  Q
        |||| ||||||||||||||||||    
T  32783 ttttctaatatgttttgaataagaggg 32757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 69 - 156
Target Start/End: Original strand, 31194 - 31278
Alignment:
Q  69 aagtgtgttaaattattattttttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    |||| ||||| |||||  |||||||||||||||||||| |||| ||||||   |||| |||||||||| |||||||||||| ||||||    
T  31194 aagtttgttagattatatttttttgctagattattagatataaaaaaaaa---tattaagggagtaaaatgtagattttaagataaga 31278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 156
Target Start/End: Original strand, 33328 - 33370
Alignment:
Q  114 aaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    ||||| |||||||||||||||||||||| |||||||| |||||    
T  33328 aaaaaaaatattgagggagtaaagtgtatattttaacttaaga 33370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 71; Significance: 4e-32; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 8 - 251
Target Start/End: Original strand, 351714 - 351956
Alignment:
Q  8 cgaagaatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnnaagtgtgttaaattattattttttgctagattattagaa 107  Q
    |||| |||||||||| || | || |||||||||||||||| ||| |||||||         |||||| ||| ||||||||||||||||||| ||||||||    
T  351714 cgaaaaatatgtattcaaatattgattatattaaaatagatccgtaatactattttttcg-aagtgtattagattattattttttgctagactattagaa 351812  T
Q  108 ataataaaaaagaatattgagggagtaaagtgtagattttaacataaga--nnnnnnnnatgtaattcaagcttctcttaggggaggagagtgaannnnn 205  Q
    |||| ||| |||  ||||||||||||||| |||||||||||||||||||          |||||||||| ||||||||||| |||||||||||||         
T  351813 ataaaaaacaag--tattgagggagtaaaatgtagattttaacataagaggggaggagaatgtaattcaggcttctcttagaggaggagagtgaaatatt 351910  T
Q  206 nnctaacatgttttgaataagagggaagaagaatgtatattttaac 251  Q
      |||| |||||||||||||||||| |||| | |||||||||||||    
T  351911 ttctaatatgttttgaataagaggggagaaaagtgtatattttaac 351956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0340 (Bit Score: 57; Significance: 8e-24; HSPs: 1)
Name: scaffold0340
Description:

Target: scaffold0340; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 8 - 276
Target Start/End: Original strand, 12636 - 12904
Alignment:
Q  8 cgaagaatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnnaagtgtgttaaattattatt-ttttgctagattattaga 106  Q
    |||| |||||||||| ||||||||||| |||||||||||||  | |||||||         ||||| |||| ||||||||| |||| |||||||||| ||    
T  12636 cgaaaaatatgtatttaattttttattctattaaaatagacatgtaatactattttttcg-aagtgcgttatattattattatttttctagattatttga 12734  T
Q  107 aataataaaaaagaatattgagggagtaaagtgtagattttaacataag--annnnnnnnatgtaattcaagcttctcttaggggaggagagtgaannnn 204  Q
    ||||| ||| ||  |||||||||||||||||||||||||||||||||||           || |||||||||||||||||| | |||  |||||||        
T  12735 aataaaaaataa--atattgagggagtaaagtgtagattttaacataaggagggaggagaatataattcaagcttctcttaagtgagatgagtgaaaagt 12832  T
Q  205 nnnctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagaggagagtgtaattc 276  Q
       |||| |||||||||||||||||||||  |||||||||||||||| ||| |   || |||||||||||||    
T  12833 tttctaatatgttttgaataagagggaaggggaatgtatattttaacataagagaggaagagagtgtaattc 12904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0533 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0533
Description:

Target: scaffold0533; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 13 - 156
Target Start/End: Original strand, 9922 - 10063
Alignment:
Q  13 aatatgtattaaattttttattatattaaaatagacccgcaatactannnnnnnnnaagtgtgttaaattattatttttt-gctagattattagaaataa 111  Q
    ||||| |||| ||||||||| |||||||||||||||| |||||||||         || ||||||| ||||| ||||||| |||||||||||||||||||    
T  9922 aatatttattcaattttttaatatattaaaatagaccagcaatactatttttttttaattgtgttagattataatttttttgctagattattagaaataa 10021  T
Q  112 taaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
     |||| | | |||   |||||||||||||||||||||||||||||    
T  10022 aaaaatatattat---gggagtaaagtgtagattttaacataaga 10063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 69 - 251
Target Start/End: Original strand, 25721 - 25903
Alignment:
Q  69 aagtgtgttaaattattatttt-ttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacata--agannnnnnnna 165  Q
    |||||||| | ||||||||||| ||||||||||||||||||||| ||||| |   |||||||||||||| ||||||||||| ||||  |||        |    
T  25721 aagtgtgtaagattattatttttttgctagattattagaaataaaaaaaatg---attgagggagtaaaatgtagattttagcataagagaggagagaaa 25817  T
Q  166 tgtaattcaagcttctcttaggggaggagagtgaannnnnnnctaacatgttttgaataagagggaagaagaatgtatattttaac 251  Q
    ||||||| ||||||||||| ||||||| |||||||       ||||  | ||||||||||||||  |||||| |||||||||||||    
T  25818 tgtaatttaagcttctctttggggaggggagtgaaatgctttctaatgtattttgaataagaggatagaagagtgtatattttaac 25903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 87 - 276
Target Start/End: Complemental strand, 16702 - 16515
Alignment:
Q  87 ttttttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataagannnnnnnn--atgtaattcaagcttctctt 184  Q
    ||||||||||||||||||||||||| ||||     ||||| || ||||||||||||||||| || |||||          ||||||||||||||||| ||    
T  16702 ttttttgctagattattagaaataaaaaaat----tattgtggaagtaaagtgtagattttgacttaagaggggaggggaatgtaattcaagcttctatt 16607  T
Q  185 aggggaggagagtgaannnnnnnctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagaggagagtgtaattc 276  Q
    | |||||| |||||||       |||| || ||||||||||||||| ||| || ||||||||||||| ||| | | |||| |||||||||||    
T  16606 aagggaggggagtgaaatatttcctaatatattttgaataagaggggagaggagtgtatattttaacataagatgggaggggagtgtaattc 16515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 156
Target Start/End: Original strand, 26256 - 26402
Alignment:
Q  8 cgaagaatatgtattaaattttttattatattaaaatagacccgcaatacta-nnnnnnnnnaagtgtgttaaattatta-ttttttgctagattattag 105  Q
    |||| |||||||||| || |||| ||||||||||||||||||||||||||||          |||||||||| | ||||| |||||||||||| ||| |     
T  26256 cgaaaaatatgtattcaaattttgattatattaaaatagacccgcaatactatcttttttcgaagtgtgttataatattatttttttgctagaatatcat 26355  T
Q  106 aaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    |||| || ||    ||||||||||||||||||| |||||||||||||||||    
T  26356 aaattattaa----aatattgagggagtaaagtctagattttaacataaga 26402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0695 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0695
Description:

Target: scaffold0695; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 69 - 255
Target Start/End: Original strand, 2729 - 2913
Alignment:
Q  69 aagtgtgttaaattatta-ttttttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga--nnnnnnnna 165  Q
    |||||||||| ||||||| |||||||||||||||||| |||||| |||      |||||||||| ||||||||||||||||||||||||          |    
T  2729 aagtgtgttagattattaattttttgctagattattaaaaataaaaaatt----tattgagggattaaagtgtagattttaacataagaggggaggggaa 2824  T
Q  166 tgtaattcaagcttctcttaggggaggagagtgaannnnnnnctaacatgttttgaataagagggaagaagaatgtatattttaacttaa 255  Q
    |||||||||||||||||||| ||||||  | ||||       |||| || ||||||||||||||| ||  || |||||||||||||||||    
T  2825 tgtaattcaagcttctctta-gggagggaaatgaaatattttctaatatattttgaataagaggggaggggagtgtatattttaacttaa 2913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 69 - 144
Target Start/End: Original strand, 118719 - 118791
Alignment:
Q  69 aagtgtgttaaattattatt-ttttgctagattattagaaataataaaaaagaatattgagggagtaaagtgtagat 144  Q
    |||||||||| ||||||||| ||||||||||||||||||||||| ||||     |||| ||||||||||||||||||    
T  118719 aagtgtgttagattattattgttttgctagattattagaaataaaaaaat----tatttagggagtaaagtgtagat 118791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0368 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0368
Description:

Target: scaffold0368; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 276
Target Start/End: Complemental strand, 10734 - 10623
Alignment:
Q  165 atgtaattcaagcttctcttaggggaggagagtgaannnnnnnctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagagg 264  Q
    ||||||||||||||||||| | |||||| |||||||       |||| |||||||||||||||||| ||   ||||||||||||||| ||| | | | ||    
T  10734 atgtaattcaagcttctctcaagggaggggagtgaaatattttctaatatgttttgaataagaggggagggaaatgtatattttaacataagaggggcgg 10635  T
Q  265 agagtgtaattc 276  Q
     |||||||||||    
T  10634 ggagtgtaattc 10623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 95 - 156
Target Start/End: Original strand, 26867 - 26927
Alignment:
Q  95 tagattattagaaataataaaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    ||||||||||||||||| |||||| |||||||||||  ||||  ||||||||||||||||||    
T  26867 tagattattagaaataaaaaaaaa-aatattgaggggttaaaccgtagattttaacataaga 26927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0712 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0712
Description:

Target: scaffold0712; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 165 - 257
Target Start/End: Complemental strand, 3792 - 3700
Alignment:
Q  165 atgtaattcaagcttctcttaggggaggagagtgaannnnnnnctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaa 257  Q
    ||||||||||||||||||| | |||||| || |||        |||| |||||||||||||||| |||||  ||||||||||||||| |||||    
T  3792 atgtaattcaagcttctctcaagggaggtgaatgatatattttctaatatgttttgaataagagagaagagaaatgtatattttaacataaaa 3700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0709 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0709
Description:

Target: scaffold0709; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 165 - 257
Target Start/End: Complemental strand, 3812 - 3720
Alignment:
Q  165 atgtaattcaagcttctcttaggggaggagagtgaannnnnnnctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaa 257  Q
    ||||||||||||||||||| | |||||| || |||        |||| |||||||||||||||| |||||  ||||||||||||||| |||||    
T  3812 atgtaattcaagcttctctcaagggaggtgaatgatatattttctaatatgttttgaataagagagaagagaaatgtatattttaacataaaa 3720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0289 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0289
Description:

Target: scaffold0289; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 95 - 156
Target Start/End: Complemental strand, 3622 - 3560
Alignment:
Q  95 tagattattagaaataataaaaaaga-atattgagggagtaaagtgtagattttaacataaga 156  Q
    ||||||||||||||||| |||| | | ||||||||||| ||||| |||||||||||| |||||    
T  3622 tagattattagaaataaaaaaatatagatattgagggattaaagcgtagattttaacttaaga 3560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0289; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 276
Target Start/End: Complemental strand, 3506 - 3438
Alignment:
Q  208 ctaacatgttttgaataagagggaagaagaatgtatattttaacttaaaaagagaggagagtgtaattc 276  Q
    |||| |||||||||||||||||| ||  || ||||||||||||| ||| | | |||||| |||||||||    
T  3506 ctaatatgttttgaataagaggggaggggagtgtatattttaacataagaggggaggagtgtgtaattc 3438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 156
Target Start/End: Original strand, 18726 - 18768
Alignment:
Q  114 aaaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    ||||| |||||||| |||||||||||||||||||||| |||||    
T  18726 aaaaaaaatattgacggagtaaagtgtagattttaacttaaga 18768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 126 - 230
Target Start/End: Original strand, 421822 - 421928
Alignment:
Q  126 gagggagtaaagtgtagattttaacataagannnnnnnn--atgtaattcaagcttctcttaggggaggagagtgaannnnnnnctaacatgttttgaat 223  Q
    |||||||||||| ||||||||||||||||||          ||||||||||||||||||| | |||||| |||||||       |||| |||||||||||    
T  421822 gagggagtaaagagtagattttaacataagaggggatgggaatgtaattcaagcttctctcatgggaggggagtgaaatattttctaatatgttttgaat 421921  T
Q  224 aagaggg 230  Q
    |||||||    
T  421922 aagaggg 421928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 156
Target Start/End: Complemental strand, 13546 - 13505
Alignment:
Q  115 aaaagaatattgagggagtaaagtgtagattttaacataaga 156  Q
    |||| |||||||||||||||||||||| |||||||| |||||    
T  13546 aaaaaaatattgagggagtaaagtgtatattttaacttaaga 13505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University