View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11260_low_31 (Length: 238)
Name: NF11260_low_31
Description: NF11260
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11260_low_31 |
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Alignment Details
Target: chr3 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 40383857 - 40384084
Alignment:
| Q |
1 |
gtggaatggaataatgtgtaagactgtttagtaatgattttgcaggttccaactggtgagacattgacgtttggtgatgagaatttcatcaaatttgagg |
100 |
Q |
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| T |
40383857 |
gtggaatggaataatgtgtaagactgtttagtaatgattttgcaggttccaactggtgagacattgacgtttggtgatgagaatttcatcaaatttgagg |
40383956 |
T |
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| Q |
101 |
aagcaggtgtgcgtgaagctcgcagagctgcttttgttcttgttgctggcggtcttggcgagcgtctaggatacaatgggattaaggtatactacattta |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
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| T |
40383957 |
aagcaggtgtgcgtgaagctcgcagagctgcttttgttcttgttgctggcggtcttggtgagcgtctaggatacaatgggattaaggtatactacattta |
40384056 |
T |
|
| Q |
201 |
tcaattttttgctctatcattctctgtg |
228 |
Q |
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|||||||||||||||||||||||||||| |
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| T |
40384057 |
tcaattttttgctctatcattctctgtg |
40384084 |
T |
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