View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11262_low_1 (Length: 554)

Name: NF11262_low_1
Description: NF11262
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11262_low_1
NF11262_low_1
[»] chr1 (66 HSPs)
chr1 (126-553)||(21068958-21069380)
chr1 (1-91)||(47989537-47989627)
chr1 (1-91)||(40917789-40917879)
chr1 (1-91)||(30173691-30173781)
chr1 (1-91)||(31694639-31694729)
chr1 (1-93)||(5944323-5944415)
chr1 (20-91)||(37598879-37598950)
chr1 (9-91)||(9828092-9828174)
chr1 (1-91)||(32461393-32461482)
chr1 (1-89)||(1486646-1486728)
chr1 (4-91)||(6427507-6427594)
chr1 (20-91)||(22515827-22515898)
chr1 (1-91)||(18556385-18556475)
chr1 (1-90)||(21032246-21032335)
chr1 (20-91)||(18337377-18337448)
chr1 (1-79)||(6612112-6612190)
chr1 (2-60)||(9629860-9629918)
chr1 (9-91)||(25934664-25934746)
chr1 (10-91)||(17408740-17408821)
chr1 (20-91)||(1815305-1815376)
chr1 (1-89)||(17778586-17778670)
chr1 (32-91)||(18190048-18190107)
chr1 (20-91)||(19562556-19562626)
chr1 (20-91)||(46348323-46348394)
chr1 (20-94)||(19637816-19637890)
chr1 (20-90)||(40258874-40258944)
chr1 (14-94)||(32899932-32900013)
chr1 (20-89)||(42359391-42359460)
chr1 (9-91)||(25361934-25362012)
chr1 (20-92)||(38078600-38078672)
chr1 (9-79)||(38503368-38503436)
chr1 (9-91)||(41597410-41597492)
chr1 (22-91)||(5898206-5898275)
chr1 (54-91)||(42325641-42325678)
chr1 (43-91)||(2218299-2218347)
chr1 (55-91)||(7918154-7918190)
chr1 (43-91)||(15765829-15765877)
chr1 (29-89)||(16297223-16297283)
chr1 (20-60)||(21530737-21530777)
chr1 (43-90)||(10233327-10233374)
chr1 (23-86)||(40181922-40181984)
chr1 (20-91)||(43492434-43492505)
chr1 (20-91)||(51410073-51410144)
chr1 (37-91)||(9690213-9690267)
chr1 (20-90)||(12918993-12919063)
chr1 (37-91)||(15323233-15323287)
chr1 (33-91)||(18471356-18471414)
chr1 (45-91)||(21365992-21366038)
chr1 (41-91)||(22794018-22794068)
chr1 (53-91)||(35702542-35702580)
chr1 (41-91)||(40747707-40747757)
chr1 (57-90)||(5376448-5376481)
chr1 (29-90)||(6414932-6414993)
chr1 (46-91)||(6574051-6574096)
chr1 (32-89)||(33202963-33203020)
chr1 (20-93)||(36906056-36906128)
chr1 (9-42)||(44482278-44482311)
chr1 (47-91)||(22881567-22881611)
chr1 (55-91)||(22947813-22947849)
chr1 (43-91)||(29144320-29144368)
chr1 (37-93)||(34712321-34712377)
chr1 (43-91)||(34741918-34741965)
chr1 (47-91)||(36878541-36878585)
chr1 (43-91)||(43113005-43113053)
chr1 (43-91)||(46940748-46940796)
chr1 (43-87)||(48040418-48040462)
[»] chr4 (61 HSPs)
chr4 (281-553)||(1634445-1634717)
chr4 (1-91)||(19482708-19482798)
chr4 (1-90)||(30982808-30982897)
chr4 (31-95)||(29205527-29205591)
chr4 (20-91)||(23292926-23292997)
chr4 (20-89)||(4157197-4157266)
chr4 (33-93)||(715543-715603)
chr4 (33-93)||(752869-752929)
chr4 (154-214)||(1634325-1634385)
chr4 (12-91)||(5414101-5414180)
chr4 (20-91)||(28964188-28964259)
chr4 (1-90)||(3947702-3947785)
chr4 (9-91)||(22234819-22234901)
chr4 (1-90)||(847991-848080)
chr4 (15-91)||(16184874-16184950)
chr4 (20-91)||(16073442-16073513)
chr4 (4-91)||(24613630-24613717)
chr4 (17-91)||(53381530-53381605)
chr4 (33-91)||(3064868-3064926)
chr4 (20-89)||(4157484-4157553)
chr4 (20-92)||(21945551-21945623)
chr4 (1-93)||(47264026-47264118)
chr4 (37-88)||(28084589-28084640)
chr4 (29-91)||(35161093-35161155)
chr4 (9-91)||(46083920-46084002)
chr4 (20-93)||(2361913-2361986)
chr4 (1-86)||(30838250-30838335)
chr4 (20-93)||(49431074-49431147)
chr4 (9-93)||(5225540-5225624)
chr4 (9-92)||(11931328-11931411)
chr4 (11-91)||(15724483-15724563)
chr4 (43-91)||(17876237-17876285)
chr4 (14-93)||(24343554-24343634)
chr4 (20-92)||(34306743-34306815)
chr4 (43-90)||(5922532-5922579)
chr4 (20-91)||(12895214-12895285)
chr4 (20-91)||(35157925-35157996)
chr4 (48-91)||(40784029-40784072)
chr4 (14-91)||(944602-944680)
chr4 (21-91)||(8423658-8423728)
chr4 (32-90)||(14465006-14465064)
chr4 (43-89)||(22440559-22440605)
chr4 (32-93)||(36635390-36635451)
chr4 (12-91)||(7012117-7012197)
chr4 (1-89)||(19312375-19312463)
chr4 (55-90)||(17425348-17425383)
chr4 (20-91)||(30103297-30103368)
chr4 (5-60)||(37496748-37496803)
chr4 (1-52)||(53490732-53490783)
chr4 (56-94)||(3144584-3144622)
chr4 (20-90)||(12323968-12324038)
chr4 (18-91)||(903979-904052)
chr4 (54-91)||(5775304-5775341)
chr4 (34-91)||(7214466-7214523)
chr4 (44-93)||(37203324-37203373)
chr4 (1-37)||(10415121-10415157)
chr4 (43-91)||(11596297-11596345)
chr4 (43-91)||(18513175-18513223)
chr4 (20-60)||(29205492-29205532)
chr4 (29-93)||(32273459-32273523)
chr4 (37-93)||(42640589-42640645)
[»] chr2 (49 HSPs)
chr2 (1-93)||(26769551-26769643)
chr2 (9-94)||(34784908-34784993)
chr2 (1-91)||(37419783-37419873)
chr2 (20-91)||(18840953-18841024)
chr2 (1-91)||(30717459-30717549)
chr2 (20-89)||(2438661-2438730)
chr2 (1-93)||(12668350-12668442)
chr2 (1-92)||(11223792-11223882)
chr2 (20-90)||(28596517-28596587)
chr2 (9-91)||(35056916-35056998)
chr2 (9-90)||(44860368-44860449)
chr2 (1-89)||(36756275-36756363)
chr2 (20-91)||(15972921-15972992)
chr2 (20-86)||(12224271-12224337)
chr2 (1-90)||(4882626-4882715)
chr2 (1-89)||(15657904-15657992)
chr2 (20-92)||(24009343-24009415)
chr2 (7-91)||(27084304-27084388)
chr2 (20-91)||(38117099-38117170)
chr2 (11-93)||(24975253-24975334)
chr2 (16-90)||(27286222-27286296)
chr2 (29-91)||(41843503-41843565)
chr2 (29-91)||(42511322-42511384)
chr2 (10-91)||(36096304-36096385)
chr2 (20-92)||(37559025-37559097)
chr2 (20-91)||(20242667-20242738)
chr2 (20-87)||(37411188-37411255)
chr2 (1-91)||(18420363-18420453)
chr2 (7-93)||(32749752-32749838)
chr2 (42-91)||(18622672-18622721)
chr2 (37-94)||(28412422-28412479)
chr2 (56-93)||(31285709-31285746)
chr2 (21-89)||(19942314-19942382)
chr2 (13-92)||(22084755-22084837)
chr2 (1-49)||(34337152-34337200)
chr2 (36-91)||(6180790-6180845)
chr2 (32-91)||(15907851-15907910)
chr2 (9-91)||(18889519-18889602)
chr2 (31-78)||(29176446-29176493)
chr2 (20-91)||(30404790-30404861)
chr2 (20-91)||(34993922-34993993)
chr2 (48-90)||(3444827-3444869)
chr2 (20-69)||(5367240-5367289)
chr2 (23-96)||(19580220-19580293)
chr2 (59-92)||(22557037-22557070)
chr2 (58-91)||(44770143-44770176)
chr2 (43-91)||(18631351-18631399)
chr2 (15-91)||(19980718-19980794)
chr2 (43-95)||(29367279-29367331)
[»] chr6 (50 HSPs)
chr6 (1-91)||(8365448-8365538)
chr6 (1-93)||(9107297-9107389)
chr6 (9-91)||(10339054-10339136)
chr6 (1-91)||(16766737-16766827)
chr6 (1-93)||(8714020-8714112)
chr6 (20-93)||(34595182-34595255)
chr6 (1-93)||(5970035-5970127)
chr6 (9-91)||(10294155-10294237)
chr6 (9-91)||(18367884-18367966)
chr6 (9-92)||(3209436-3209519)
chr6 (20-91)||(4877991-4878061)
chr6 (20-88)||(32978842-32978910)
chr6 (32-91)||(8776908-8776967)
chr6 (20-91)||(28152146-28152217)
chr6 (29-91)||(17327590-17327652)
chr6 (24-90)||(17841530-17841596)
chr6 (1-89)||(12696364-12696446)
chr6 (1-90)||(31384960-31385048)
chr6 (43-90)||(31959221-31959268)
chr6 (9-91)||(16488519-16488601)
chr6 (43-88)||(8389411-8389456)
chr6 (41-90)||(24807113-24807162)
chr6 (1-69)||(9522931-9522999)
chr6 (32-91)||(16833368-16833427)
chr6 (20-91)||(24645529-24645600)
chr6 (43-90)||(27903963-27904010)
chr6 (20-91)||(28715343-28715414)
chr6 (48-91)||(34446647-34446690)
chr6 (17-91)||(7248414-7248488)
chr6 (42-91)||(13360313-13360362)
chr6 (41-93)||(19122197-19122249)
chr6 (43-91)||(34894968-34895016)
chr6 (10-89)||(5000557-5000636)
chr6 (9-91)||(9629431-9629513)
chr6 (20-91)||(13364645-13364716)
chr6 (20-94)||(7265530-7265604)
chr6 (20-91)||(12868616-12868691)
chr6 (47-85)||(15489667-15489705)
chr6 (1-91)||(17302597-17302687)
chr6 (1-91)||(17435239-17435329)
chr6 (43-89)||(28862188-28862234)
chr6 (43-88)||(9025448-9025493)
chr6 (48-89)||(26178620-26178661)
chr6 (54-91)||(32839571-32839608)
chr6 (20-92)||(7378027-7378099)
chr6 (43-91)||(7938171-7938219)
chr6 (43-91)||(9027238-9027286)
chr6 (20-72)||(12627536-12627588)
chr6 (47-83)||(16388171-16388207)
chr6 (11-91)||(34073278-34073356)
[»] chr3 (62 HSPs)
chr3 (1-91)||(41961579-41961669)
chr3 (1-91)||(49651716-49651805)
chr3 (1-90)||(14216932-14217021)
chr3 (1-90)||(14223061-14223150)
chr3 (1-91)||(34185052-34185142)
chr3 (1-89)||(4987222-4987310)
chr3 (3-91)||(28812557-28812645)
chr3 (20-91)||(40993275-40993346)
chr3 (9-91)||(8039764-8039846)
chr3 (1-91)||(14209153-14209243)
chr3 (1-67)||(14832139-14832205)
chr3 (20-93)||(20503513-20503586)
chr3 (1-93)||(16789052-16789143)
chr3 (20-91)||(55401123-55401194)
chr3 (20-76)||(10955000-10955056)
chr3 (1-48)||(750590-750637)
chr3 (1-91)||(27505286-27505370)
chr3 (14-91)||(21211335-21211413)
chr3 (43-91)||(25074866-25074914)
chr3 (20-91)||(52369834-52369906)
chr3 (21-92)||(18426998-18427069)
chr3 (1-91)||(15796223-15796313)
chr3 (31-89)||(28918062-28918120)
chr3 (20-90)||(8789489-8789561)
chr3 (21-94)||(8842378-8842451)
chr3 (1-93)||(14829729-14829822)
chr3 (20-92)||(11252024-11252096)
chr3 (9-89)||(13806284-13806363)
chr3 (29-84)||(3631741-3631796)
chr3 (20-91)||(7171549-7171620)
chr3 (20-91)||(35222986-35223057)
chr3 (16-90)||(37077413-37077488)
chr3 (154-213)||(50567201-50567260)
chr3 (7-93)||(9800086-9800172)
chr3 (1-91)||(17005548-17005638)
chr3 (43-93)||(21367337-21367387)
chr3 (29-90)||(10690193-10690254)
chr3 (55-92)||(21861658-21861695)
chr3 (29-90)||(32804485-32804546)
chr3 (31-79)||(6525635-6525683)
chr3 (29-89)||(29508507-29508567)
chr3 (43-91)||(40052383-40052431)
chr3 (54-93)||(3730106-3730145)
chr3 (55-90)||(5339190-5339225)
chr3 (20-91)||(13845465-13845536)
chr3 (43-93)||(11610580-11610630)
chr3 (37-91)||(17276792-17276846)
chr3 (56-94)||(40150522-40150560)
chr3 (1-91)||(55213003-55213092)
chr3 (54-91)||(8903517-8903554)
chr3 (43-88)||(12100340-12100385)
chr3 (20-61)||(45451601-45451642)
chr3 (43-91)||(4466540-4466588)
chr3 (55-91)||(4990912-4990948)
chr3 (32-91)||(5440967-5441027)
chr3 (43-91)||(8039289-8039337)
chr3 (43-91)||(10455867-10455915)
chr3 (43-91)||(16789585-16789633)
chr3 (55-87)||(21256952-21256984)
chr3 (23-91)||(23657790-23657858)
chr3 (23-91)||(26492145-26492213)
chr3 (55-91)||(27513598-27513634)
[»] chr8 (50 HSPs)
chr8 (1-91)||(29510233-29510323)
chr8 (1-91)||(22652016-22652106)
chr8 (1-91)||(15816058-15816148)
chr8 (1-91)||(8343356-8343446)
chr8 (1-91)||(21465452-21465542)
chr8 (4-90)||(29447040-29447126)
chr8 (15-91)||(34450961-34451037)
chr8 (20-91)||(36450694-36450765)
chr8 (1-91)||(4673354-4673444)
chr8 (29-91)||(16641909-16641971)
chr8 (30-91)||(18407777-18407838)
chr8 (1-61)||(2572015-2572075)
chr8 (9-93)||(29447492-29447576)
chr8 (43-91)||(30067968-30068016)
chr8 (20-87)||(5813640-5813707)
chr8 (9-91)||(11803307-11803389)
chr8 (20-89)||(3025599-3025668)
chr8 (43-91)||(8343038-8343086)
chr8 (31-79)||(22943301-22943349)
chr8 (43-91)||(38487157-38487205)
chr8 (54-93)||(25566912-25566951)
chr8 (9-92)||(26902103-26902186)
chr8 (1-91)||(27067231-27067319)
chr8 (4-91)||(28745541-28745628)
chr8 (29-91)||(6065586-6065648)
chr8 (47-93)||(13436908-13436954)
chr8 (20-89)||(926730-926799)
chr8 (9-90)||(24205749-24205830)
chr8 (43-92)||(40064033-40064082)
chr8 (34-86)||(14639735-14639787)
chr8 (20-91)||(17751703-17751775)
chr8 (20-91)||(17760690-17760762)
chr8 (15-91)||(18964233-18964309)
chr8 (43-91)||(33389295-33389343)
chr8 (20-88)||(40332239-40332307)
chr8 (20-91)||(3951476-3951547)
chr8 (36-87)||(12559044-12559095)
chr8 (20-91)||(33405324-33405395)
chr8 (20-75)||(44462151-44462206)
chr8 (20-75)||(44469684-44469739)
chr8 (57-91)||(11833935-11833969)
chr8 (29-91)||(24858073-24858135)
chr8 (48-86)||(31109463-31109501)
chr8 (20-90)||(43737752-43737822)
chr8 (23-92)||(31557047-31557116)
chr8 (41-93)||(11791611-11791662)
chr8 (20-91)||(14513108-14513180)
chr8 (49-89)||(16987990-16988030)
chr8 (55-91)||(34127172-34127208)
chr8 (43-91)||(39820500-39820547)
[»] scaffold0450 (1 HSPs)
scaffold0450 (1-93)||(8562-8654)
[»] chr7 (56 HSPs)
chr7 (1-93)||(24339682-24339774)
chr7 (1-91)||(2334290-2334379)
chr7 (1-91)||(5409771-5409855)
chr7 (1-91)||(7438746-7438836)
chr7 (20-92)||(21880200-21880272)
chr7 (1-89)||(26033392-26033480)
chr7 (1-91)||(25822695-25822785)
chr7 (20-90)||(32287404-32287474)
chr7 (9-78)||(32308168-32308237)
chr7 (20-91)||(598256-598327)
chr7 (1-91)||(9778540-9778624)
chr7 (20-91)||(21864856-21864927)
chr7 (20-90)||(20549839-20549909)
chr7 (1-80)||(7058466-7058543)
chr7 (20-91)||(7133212-7133284)
chr7 (4-91)||(43027404-43027485)
chr7 (20-91)||(15680857-15680928)
chr7 (20-91)||(18212973-18213044)
chr7 (33-96)||(20545179-20545242)
chr7 (29-91)||(17852057-17852119)
chr7 (1-91)||(32093954-32094039)
chr7 (43-91)||(40131939-40131987)
chr7 (20-83)||(26733352-26733415)
chr7 (1-91)||(21930668-21930758)
chr7 (33-91)||(29763129-29763187)
chr7 (37-87)||(40287306-40287356)
chr7 (29-83)||(48246750-48246804)
chr7 (21-90)||(3554447-3554516)
chr7 (9-78)||(11072344-11072413)
chr7 (53-90)||(49107886-49107923)
chr7 (43-91)||(6490787-6490835)
chr7 (1-89)||(9408265-9408353)
chr7 (1-37)||(11272569-11272605)
chr7 (9-49)||(15902870-15902910)
chr7 (43-91)||(24105749-24105797)
chr7 (43-91)||(35749958-35750006)
chr7 (40-91)||(1401091-1401142)
chr7 (45-92)||(3652249-3652296)
chr7 (1-68)||(6028665-6028732)
chr7 (9-52)||(9933321-9933364)
chr7 (32-79)||(27093365-27093412)
chr7 (32-79)||(27184889-27184936)
chr7 (20-91)||(33994260-33994331)
chr7 (14-92)||(38804488-38804567)
chr7 (29-91)||(1433516-1433578)
chr7 (9-83)||(6630849-6630923)
chr7 (20-90)||(7197238-7197308)
chr7 (24-69)||(8234198-8234243)
chr7 (62-91)||(23128603-23128632)
chr7 (54-91)||(38134335-38134372)
chr7 (51-91)||(3991392-3991432)
chr7 (42-94)||(5307326-5307378)
chr7 (54-90)||(11272531-11272567)
chr7 (43-91)||(14729774-14729822)
chr7 (33-89)||(22868108-22868164)
chr7 (55-91)||(35862034-35862070)
[»] chr5 (56 HSPs)
chr5 (1-87)||(30183589-30183675)
chr5 (1-91)||(7677745-7677835)
chr5 (1-91)||(39698581-39698671)
chr5 (1-90)||(21542070-21542159)
chr5 (1-91)||(21522790-21522880)
chr5 (1-91)||(21533356-21533446)
chr5 (1-78)||(19579741-19579818)
chr5 (39-91)||(38464313-38464365)
chr5 (20-91)||(21576685-21576756)
chr5 (1-92)||(31084363-31084448)
chr5 (20-88)||(39268541-39268609)
chr5 (20-79)||(15382533-15382592)
chr5 (21-91)||(17123097-17123166)
chr5 (7-97)||(36642686-36642775)
chr5 (9-90)||(6401546-6401627)
chr5 (20-89)||(21190998-21191067)
chr5 (10-91)||(30098375-30098456)
chr5 (20-89)||(30502330-30502399)
chr5 (20-89)||(30542673-30542742)
chr5 (56-95)||(14674333-14674372)
chr5 (26-89)||(23015926-23015989)
chr5 (20-91)||(32630675-32630746)
chr5 (1-91)||(37328775-37328863)
chr5 (20-91)||(43564929-43565000)
chr5 (9-91)||(21814309-21814391)
chr5 (56-93)||(2548464-2548501)
chr5 (9-90)||(3966551-3966632)
chr5 (43-92)||(19552475-19552524)
chr5 (31-91)||(21194063-21194123)
chr5 (20-91)||(16304366-16304437)
chr5 (20-89)||(18421779-18421852)
chr5 (23-86)||(26312820-26312883)
chr5 (29-91)||(14873579-14873641)
chr5 (29-91)||(27932292-27932354)
chr5 (15-93)||(32766870-32766948)
chr5 (54-91)||(6247692-6247729)
chr5 (2-79)||(17088326-17088398)
chr5 (43-92)||(19820327-19820376)
chr5 (43-91)||(2419938-2419986)
chr5 (47-91)||(15884052-15884096)
chr5 (29-89)||(43001862-43001922)
chr5 (12-91)||(16864067-16864146)
chr5 (41-88)||(18586232-18586279)
chr5 (13-88)||(18592125-18592200)
chr5 (20-91)||(28588614-28588685)
chr5 (55-93)||(22423762-22423800)
chr5 (31-89)||(24238603-24238661)
chr5 (14-79)||(43554568-43554633)
chr5 (51-92)||(4105338-4105379)
chr5 (54-91)||(35017125-35017162)
chr5 (56-93)||(36838615-36838652)
chr5 (55-91)||(10298633-10298669)
chr5 (43-91)||(36640260-36640308)
chr5 (43-91)||(39695951-39695998)
chr5 (23-91)||(42029803-42029871)
chr5 (20-92)||(42893408-42893480)
[»] scaffold0003 (2 HSPs)
scaffold0003 (8-93)||(241641-241726)
scaffold0003 (43-91)||(236914-236962)
[»] scaffold0136 (1 HSPs)
scaffold0136 (1-91)||(3778-3868)
[»] scaffold0019 (1 HSPs)
scaffold0019 (1-91)||(71765-71855)
[»] scaffold0652 (1 HSPs)
scaffold0652 (20-90)||(403-473)
[»] scaffold0086 (1 HSPs)
scaffold0086 (1-91)||(2968-3058)
[»] scaffold0793 (1 HSPs)
scaffold0793 (33-93)||(4819-4879)
[»] scaffold0512 (1 HSPs)
scaffold0512 (20-91)||(4976-5047)
[»] scaffold0154 (1 HSPs)
scaffold0154 (1-91)||(13453-13543)
[»] scaffold0306 (1 HSPs)
scaffold0306 (20-89)||(13454-13523)
[»] scaffold0152 (1 HSPs)
scaffold0152 (20-89)||(21804-21873)
[»] scaffold0053 (1 HSPs)
scaffold0053 (20-93)||(8846-8919)
[»] scaffold0004 (1 HSPs)
scaffold0004 (29-90)||(92879-92940)
[»] scaffold0123 (1 HSPs)
scaffold0123 (9-93)||(44452-44536)
[»] scaffold0380 (1 HSPs)
scaffold0380 (33-91)||(8662-8720)
[»] scaffold0171 (1 HSPs)
scaffold0171 (1-91)||(23551-23641)
[»] scaffold0036 (1 HSPs)
scaffold0036 (9-89)||(9678-9758)
[»] scaffold0008 (1 HSPs)
scaffold0008 (1-89)||(263303-263391)
[»] scaffold0475 (1 HSPs)
scaffold0475 (48-91)||(3384-3427)
[»] scaffold0128 (1 HSPs)
scaffold0128 (43-90)||(32775-32822)
[»] scaffold0057 (1 HSPs)
scaffold0057 (15-91)||(24078-24155)
[»] scaffold0044 (1 HSPs)
scaffold0044 (1-60)||(53220-53279)
[»] scaffold0623 (1 HSPs)
scaffold0623 (9-90)||(5926-6007)
[»] scaffold0697 (1 HSPs)
scaffold0697 (20-60)||(1692-1732)
[»] scaffold0279 (1 HSPs)
scaffold0279 (13-61)||(17839-17887)
[»] scaffold0050 (1 HSPs)
scaffold0050 (20-88)||(70326-70394)
[»] scaffold0361 (1 HSPs)
scaffold0361 (29-92)||(14584-14647)
[»] scaffold0191 (1 HSPs)
scaffold0191 (20-91)||(31343-31414)
[»] scaffold0021 (1 HSPs)
scaffold0021 (32-91)||(2978-3037)
[»] scaffold0227 (1 HSPs)
scaffold0227 (48-93)||(15047-15092)


Alignment Details
Target: chr1 (Bit Score: 290; Significance: 1e-162; HSPs: 66)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 290; E-Value: 1e-162
Query Start/End: Original strand, 126 - 553
Target Start/End: Original strand, 21068958 - 21069380
Alignment:
Q  126 agaacaaaacaaaaagagaagtaagaggacataccaacaccaaagtcccaggaatcagcttcaccatcaacattcaagcctcctgtattgtattgtatc- 224  Q
    ||||||||| |||| ||||||| ||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      
T  21068958 agaacaaaataaaaggagaagtgagagagcataccaacaccaaagtcccaggaatcagcttcaccatcaacattcaagcctcctgtattgtattgtattg 21069057  T
Q  225 --------atcaatcaacaaacaatgaattacaaatgacaaattaaaaagtgagaggacatagaataaaagaaatacttggagaggtgtcgggggcgatc 316  Q
            |||||||||||||||||||||||||||| |||||||||||||||||||||||||              |||||||||||||| |||||||||    
T  21069058 tatcatcaatcaatcaacaaacaatgaattacaaattacaaattaaaaagtgagaggacata--------------cttggagaggtgtcaggggcgatc 21069143  T
Q  317 aaggcaacaccgtgttcggaagcggcacgttgagcaccggatttgaagatgaaattctcatcggtgcaagtgagaccagagagccaataaagaactggga 416  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21069144 aaggcaacaccgtgttcggaagcggcacgttgagcaccggatttgaagatgaaattctcatcggtgcaagtgagaccagagagccaataaagaactggga 21069243  T
Q  417 atgatttgttggaatcagaattgggaaagtaaatgtggaagttcattgaacaaccaagtgtgttactgtaatgtttgtatctcttgttgtatcctccgaa 516  Q
    |||||||||||||||||||||||||||||||||| || |||||||||  ||||||||||||||| |||||||||||||||||||| ||||||||||| ||    
T  21069244 atgatttgttggaatcagaattgggaaagtaaatatgaaagttcatttcacaaccaagtgtgttgctgtaatgtttgtatctcttattgtatcctccaaa 21069343  T
Q  517 catcttcacactactcaactccgtctctgctcctcct 553  Q
    ||||||| ||||||||||||||||| |||||||||||    
T  21069344 catcttcccactactcaactccgtcactgctcctcct 21069380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 47989537 - 47989627
Alignment:
Q  1 aattacaagtgtcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| ||||  ||||||| |||||||||||||||||| |||||||||||    
T  47989537 aattacaagtgtcggtgtcgtgtcggtgtcggacacgacacatgtctgacatcgggacacgcctaatccgaggagtgtccgtgcttcatag 47989627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 40917789 - 40917879
Alignment:
Q  1 aattacaagtgtcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    |||||||||| |||||||||||||||| | ||||||||||| |||||||||| ||||||| ||||||||||||| |||| |||||||||||    
T  40917789 aattacaagtctcggtgtcgtgtcggtgttggacacgacacgtgtccgacaccgggacacgcctaatccgaggactgtccgtgcttcatag 40917879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 30173781 - 30173691
Alignment:
Q  1 aattacaagtgtcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||| || |||||| ||||| |||| || | || |||||||||||    
T  30173781 aattacaagtgtcggtgtcgtgtccgtatcggacacgacacatgtccgactctaggacacgcctaacccgacgaatatccgtgcttcatag 30173691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 31694729 - 31694639
Alignment:
Q  1 aattacaagtgtcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    ||||||||||||||||||||||||||| |||||||| |||||| | |||||| || |||| ||||||| |||||||||| |||||||||||    
T  31694729 aattacaagtgtcggtgtcgtgtcggtgtcggacacaacacatattcgacaccggaacacgcctaatctgaggagtgtccgtgcttcatag 31694639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 5944323 - 5944415
Alignment:
Q  1 aattacaagtgtcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatagat 93  Q
    ||||| ||||||||||||||||||| |  ||||||| ||||||||||||||| |||| || |||||||||||||||||  |||||||||||||    
T  5944323 aattataagtgtcggtgtcgtgtcgatgacggacacaacacatgtccgacaccgggatacgcctaatccgaggagtgttcgtgcttcatagat 5944415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 20 - 91
Target Start/End: Original strand, 37598879 - 37598950
Alignment:
Q  20 gtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    |||||||| ||||||||||||| ||||||||| |||||||| |||||||||||||||||| |||||||||||    
T  37598879 gtgtcggtgtcggacacgacacgtgtccgacaatgggacacgcctaatccgaggagtgtccgtgcttcatag 37598950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 9 - 91
Target Start/End: Original strand, 9828092 - 9828174
Alignment:
Q  9 gtgtcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    |||||||||||||||| || || |||||||||| |||||||||| |||||||  ||||||||||||||||| |||||||||||    
T  9828092 gtgtcggtgtcgtgtccgtgtcagacacgacacgtgtccgacaccgggacacgtctaatccgaggagtgtccgtgcttcatag 9828174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 32461482 - 32461393
Alignment:
Q  1 aattacaagtgtcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    |||||||||||| ||||| |||||||| ||||||||||||| |||| ||||||||||||| |||||||| || |||||| |||||||||||    
T  32461482 aattacaagtgttggtgt-gtgtcggtgtcggacacgacacgtgtctgacactgggacacgcctaatccaagaagtgtccgtgcttcatag 32461393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 1486728 - 1486646
Alignment:
Q  1 aattacaagtgtcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcat 89  Q
    ||||| ||||||||||||||||||||      ||||||||| |||||||||| ||||||| ||||||||||||||||||||||||||||    
T  1486728 aattataagtgtcggtgtcgtgtcgg------acacgacacgtgtccgacaccgggacacgcctaatccgaggagtgtctgtgcttcat 1486646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 4 - 91
Target Start/End: Original strand, 6427507 - 6427594
Alignment:
Q  4 tacaagtgtcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    |||||||||| ||||||||| ||  ||||||||||||| |||||||||| ||||||| ||||||| || ||||||| |||||||||||    
T  6427507 tacaagtgtcagtgtcgtgtaggcgtcggacacgacacgtgtccgacaccgggacacgcctaatctgatgagtgtccgtgcttcatag 6427594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 20 - 91
Target Start/End: Complemental strand, 22515898 - 22515827
Alignment:
Q  20 gtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    |||||||| ||||||||||||||| |||||||| | ||||| |||||||||||||||||| |||||||||||    
T  22515898 gtgtcggtgtcggacacgacacatatccgacaccgagacacgcctaatccgaggagtgtccgtgcttcatag 22515827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 18556475 - 18556385
Alignment:
Q  1 aattacaagtgtcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    |||||||||| | ||||||||| |||| || ||| |||||| | |||||||||||||||| ||||||||||| |||||| |||||||||||    
T  18556475 aattacaagtattggtgtcgtgacggtgtcagacccgacacgtatccgacactgggacacgcctaatccgagaagtgtccgtgcttcatag 18556385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 21032246 - 21032335
Alignment:
Q  1 aattacaagtgtcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcata 90  Q
    |||||||| |||||||||||||| ||| ||||||||||||  |||||||||  | || || |||||||| ||||||||||||||||||||    
T  21032246 aattacaaatgtcggtgtcgtgtgggtgtcggacacgacatgtgtccgacatcgagagacgcctaatccaaggagtgtctgtgcttcata 21032335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 20 - 91
Target Start/End: Original strand, 18337377 - 18337448
Alignment:
Q  20 gtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    |||||||| |||||||| |||| |||||||||||||||||  ||| |||||||||||||| |||||||||||    
T  18337377 gtgtcggtgtcggacacaacacgtgtccgacactgggacatgcctgatccgaggagtgtccgtgcttcatag 18337448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 6612190 - 6612112
Alignment:
Q  1 aattacaagtgtcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtc 79  Q
    ||||||||||||||||||||||||| | |||||||||| |  ||||||||||  |||||| |||||||| |||||||||    
T  6612190 aattacaagtgtcggtgtcgtgtcgatgtcggacacgatatgtgtccgacaccaggacacgcctaatccaaggagtgtc 6612112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 2 - 60
Target Start/End: Complemental strand, 9629918 - 9629860
Alignment:
Q  2 attacaagtgtcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacac 60  Q
    |||| ||||||||||||||||||| | |||||||||||||||||||||||| |||||||    
T  9629918 attataagtgtcggtgtcgtgtcgatgtcggacacgacacatgtccgacaccgggacac 9629860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 9 - 91
Target Start/End: Original strand, 25934664 - 25934746
Alignment:
Q  9 gtgtcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    |||||||| |||||||||| ||||||||||||| |||| ||||| |||| || ||| |||| ||||||||| |||||||||||    
T  25934664 gtgtcggtatcgtgtcggtgtcggacacgacacgtgtctgacacggggatacgccttatccaaggagtgtccgtgcttcatag 25934746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 10 - 91
Target Start/End: Original strand, 17408740 - 17408821
Alignment:
Q  10 tgtcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    ||||||||| |||| |||||| |||||||||| ||||||||||   || |||||||||| || |||||||||||||||||||    
T  17408740 tgtcggtgttgtgttggtatcagacacgacacgtgtccgacaccaagatacacctaatctgaagagtgtctgtgcttcatag 17408821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 20 - 91
Target Start/End: Original strand, 1815305 - 1815376
Alignment:
Q  20 gtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    |||||||| || ||||||||||||||||||||| ||||||| ||||||| |||||||| | ||| |||||||    
T  1815305 gtgtcggtgtccgacacgacacatgtccgacaccgggacacgcctaatctgaggagtgaccgtgattcatag 1815376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 17778586 - 17778670
Alignment:
Q  1 aattacaagtgtcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcat 89  Q
    ||||||||||||||||||||||||||| |||    |||||| |||||||||| ||||||  ||||||||||| |||||  |||||||||    
T  17778586 aattacaagtgtcggtgtcgtgtcggtgtcg----cgacacgtgtccgacaccgggacatgcctaatccgagaagtgttcgtgcttcat 17778670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 32 - 91
Target Start/End: Complemental strand, 18190107 - 18190048
Alignment:
Q  32 gacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    ||||| |||| |||||||||| ||||||||||||||||||||||||| || |||||||||    
T  18190107 gacacaacacgtgtccgacaccgggacacacctaatccgaggagtgtatgcgcttcatag 18190048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 20 - 91
Target Start/End: Complemental strand, 19562626 - 19562556
Alignment:
Q  20 gtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    ||||| || ||||| || |||| |||||||||| |||||||||||||||||||||||||| |||||||||||    
T  19562626 gtgtcagtgtcggatacaacacgtgtccgacacagggacacacctaatccgaggagtgtc-gtgcttcatag 19562556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 20 - 91
Target Start/End: Complemental strand, 46348394 - 46348323
Alignment:
Q  20 gtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    |||||||| ||||||||||||| |||||||||| | ||||| ||| |||||||| ||||| |||||||||||    
T  46348394 gtgtcggtgtcggacacgacacgtgtccgacaccgagacacgcctgatccgaggtgtgtccgtgcttcatag 46348323  T

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Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 20 - 94
Target Start/End: Original strand, 19637816 - 19637890
Alignment:
Q  20 gtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatagata 94  Q
    |||||||| |||||||||| |||| |||||||| ||||| | ||||||||||||||| | ||||| |||||||||    
T  19637816 gtgtcggtgtcggacacgatacatatccgacaccgggacgcccctaatccgaggagtatttgtgcatcatagata 19637890  T

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Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 20 - 90
Target Start/End: Complemental strand, 40258944 - 40258874
Alignment:
Q  20 gtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcata 90  Q
    |||||||| || |||||||||| ||||||||||  |||||| ||||||||||||||||||  |||||||||    
T  40258944 gtgtcggtgtcagacacgacacctgtccgacaccaggacacgcctaatccgaggagtgtccatgcttcata 40258874  T

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Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 14 - 94
Target Start/End: Original strand, 32899932 - 32900013
Alignment:
Q  14 ggtgtcgtgtcggtatcggacac-gacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatagata 94  Q
    ||||| |||||||| |||||||| ||| |||||| ||||| ||||||| ||||||||||||| ||||  |||||||||||||    
T  32899932 ggtgttgtgtcggtgtcggacaccgacgcatgtcggacaccgggacacccctaatccgaggattgtccttgcttcatagata 32900013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 20 - 89
Target Start/End: Complemental strand, 42359460 - 42359391
Alignment:
Q  20 gtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcat 89  Q
    |||||||| ||||||| |||   |||||||||| ||||||| |||||||||||||||||| |||||||||    
T  42359460 gtgtcggtgtcggacaagacgtgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcat 42359391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 9 - 91
Target Start/End: Original strand, 25361934 - 25362012
Alignment:
Q  9 gtgtcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    ||||| ||||||||||||| ||||||||||||  |||||||||| || ||||  ||||||||| ||||||| |||||||||||    
T  25361934 gtgtcagtgtcgtgtcggtgtcggacacgaca--tgtccgacaccggaacac--ctaatccgaagagtgtccgtgcttcatag 25362012  T

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Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 20 - 92
Target Start/End: Complemental strand, 38078672 - 38078600
Alignment:
Q  20 gtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcataga 92  Q
    |||||||| ||||||||||||||||| | ||||  |||||| ||||||||||||||| |  ||||||||||||    
T  38078672 gtgtcggtgtcggacacgacacatgttcaacaccaggacacgcctaatccgaggagtattcgtgcttcataga 38078600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 38503368 - 38503436
Alignment:
Q  9 gtgtcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtc 79  Q
    ||||||||||| |||||||  |||||| |||||||||| ||| | |||||||||||||||||||| |||||    
T  38503368 gtgtcggtgtcctgtcggt--cggacatgacacatgtctgacgcagggacacacctaatccgaggtgtgtc 38503436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 91
Target Start/End: Complemental strand, 41597492 - 41597410
Alignment:
Q  9 gtgtcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    |||| ||||| ||||| || ||||||||||||| |||| ||||| |||| || | | |||| |||||||||||||||||||||    
T  41597492 gtgttggtgttgtgtccgtgtcggacacgacacgtgtctgacacggggatacgctttatccaaggagtgtctgtgcttcatag 41597410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 22 - 91
Target Start/End: Complemental strand, 5898275 - 5898206
Alignment:
Q  22 gtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    |||||| || |||||||||| ||||| |||| |||||||  ||||||||||||||||| |||||| ||||    
T  5898275 gtcggtgtcagacacgacacgtgtccaacaccgggacacgtctaatccgaggagtgtccgtgctttatag 5898206  T

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Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 54 - 91
Target Start/End: Original strand, 42325641 - 42325678
Alignment:
Q  54 gggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    |||||||||||||| |||||||||||||||||||||||    
T  42325641 gggacacacctaattcgaggagtgtctgtgcttcatag 42325678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 43 - 91
Target Start/End: Original strand, 2218299 - 2218347
Alignment:
Q  43 tgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    ||||||||||| |||||| ||||||| |||||||||| |||||||||||    
T  2218299 tgtccgacactaggacacgcctaatctgaggagtgtccgtgcttcatag 2218347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 55 - 91
Target Start/End: Complemental strand, 7918190 - 7918154
Alignment:
Q  55 ggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    ||||||||||||||||||||||||| |||||||||||    
T  7918190 ggacacacctaatccgaggagtgtccgtgcttcatag 7918154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 43 - 91
Target Start/End: Original strand, 15765829 - 15765877
Alignment:
Q  43 tgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    |||| ||||||||||||| |||||||||| ||||||| |||||||||||    
T  15765829 tgtctgacactgggacacgcctaatccgaagagtgtccgtgcttcatag 15765877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 29 - 89
Target Start/End: Complemental strand, 16297283 - 16297223
Alignment:
Q  29 tcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcat 89  Q
    |||||||||||   ||||||||||  |||||| |||||||||||||||||| |||||||||    
T  16297283 tcggacacgacgtgtgtccgacaccaggacacgcctaatccgaggagtgtccgtgcttcat 16297223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 21530737 - 21530777
Alignment:
Q  20 gtgtcggtatcggacacgacacatgtccgacactgggacac 60  Q
    |||||||| ||||||||||||||||||||||||| ||||||    
T  21530737 gtgtcggtgtcggacacgacacatgtccgacactaggacac 21530777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 43 - 90
Target Start/End: Original strand, 10233327 - 10233374
Alignment:
Q  43 tgtccgacactgggacacacctaatccgaggagtgtctgtgcttcata 90  Q
    ||||||||||  |||||||||||||| |||||||||| ||||||||||    
T  10233327 tgtccgacaccaggacacacctaatcagaggagtgtccgtgcttcata 10233374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 23 - 86
Target Start/End: Original strand, 40181922 - 40181984
Alignment:
Q  23 tcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgctt 86  Q
    ||||| |||||||| |||| ||||| |||| ||||||| |||||||||||||||| ||||||||    
T  40181922 tcggtgtcggacacaacacgtgtcctacaccgggacacgcctaatccgaggagtg-ctgtgctt 40181984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 91
Target Start/End: Complemental strand, 43492505 - 43492434
Alignment:
Q  20 gtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    |||||||| || ||||| ||||||||||||||| || |||| |||||||||| |||  | ||||||||||||    
T  43492505 gtgtcggtgtcagacacaacacatgtccgacaccggcacacgcctaatccgaagagcatatgtgcttcatag 43492434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 91
Target Start/End: Original strand, 51410073 - 51410144
Alignment:
Q  20 gtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    |||||||| ||||||||||||| | |||||||| | ||||| |||||||| |||||| |  |||||||||||    
T  51410073 gtgtcggtgtcggacacgacacgtatccgacaccgagacacgcctaatccaaggagtattcgtgcttcatag 51410144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 37 - 91
Target Start/End: Complemental strand, 9690267 - 9690213
Alignment:
Q  37 gacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    ||||| |||||||||| ||||||| |||||||||  |||||| ||||||||||||    
T  9690267 gacacgtgtccgacaccgggacacgcctaatccggagagtgtttgtgcttcatag 9690213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 20 - 90
Target Start/End: Original strand, 12918993 - 12919063
Alignment:
Q  20 gtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcata 90  Q
    |||| ||||||||||||||||| |||| ||||| |||||||  || ||||||| |||||  ||||||||||    
T  12918993 gtgttggtatcggacacgacacgtgtctgacacggggacacggcttatccgagaagtgttcgtgcttcata 12919063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 37 - 91
Target Start/End: Original strand, 15323233 - 15323287
Alignment:
Q  37 gacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    ||||| |||||||||| |  ||||||||||||||||||||||| ||| |||||||    
T  15323233 gacacgtgtccgacaccgaaacacacctaatccgaggagtgtcagtgtttcatag 15323287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 33 - 91
Target Start/End: Original strand, 18471356 - 18471414
Alignment:
Q  33 acacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    ||||||||| |||||||||| |  ||||||||||| ||||||||||| || ||||||||    
T  18471356 acacgacacgtgtccgacaccgaaacacacctaattcgaggagtgtccgtacttcatag 18471414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 45 - 91
Target Start/End: Complemental strand, 21366038 - 21365992
Alignment:
Q  45 tccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    |||||||| | ||||| |||||||||||||||||| |||||||||||    
T  21366038 tccgacaccgagacacgcctaatccgaggagtgtccgtgcttcatag 21365992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 41 - 91
Target Start/End: Complemental strand, 22794068 - 22794018
Alignment:
Q  41 catgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    |||||||||| | |||||||||||||| ||||||||||  |||||||||||    
T  22794068 catgtccgactccgggacacacctaattcgaggagtgtacgtgcttcatag 22794018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 53 - 91
Target Start/End: Complemental strand, 35702580 - 35702542
Alignment:
Q  53 tgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    |||||||| |||||||||||||||||| |||||||||||    
T  35702580 tgggacacgcctaatccgaggagtgtccgtgcttcatag 35702542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 41 - 91
Target Start/End: Complemental strand, 40747757 - 40747707
Alignment:
Q  41 catgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    ||||||| |||| ||||||| |||||||||||||| ||| |||||||||||    
T  40747757 catgtcccacacagggacacccctaatccgaggagcgtccgtgcttcatag 40747707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 57 - 90
Target Start/End: Complemental strand, 5376481 - 5376448
Alignment:
Q  57 acacacctaatccgaggagtgtctgtgcttcata 90  Q
    ||||| ||||||||||||||||||||||||||||    
T  5376481 acacatctaatccgaggagtgtctgtgcttcata 5376448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 90
Target Start/End: Complemental strand, 6414993 - 6414932
Alignment:
Q  29 tcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcata 90  Q
    ||||||||||||| |||| ||||| | ||||||  | |||||||||||||| ||||||||||    
T  6414993 tcggacacgacacgtgtctgacaccgcgacacatttcatccgaggagtgtccgtgcttcata 6414932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 46 - 91
Target Start/End: Original strand, 6574051 - 6574096
Alignment:
Q  46 ccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    ||||||||||||||| |||||||| ||||||| | |||||||||||    
T  6574051 ccgacactgggacacgcctaatccaaggagtgaccgtgcttcatag 6574096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 32 - 89
Target Start/End: Original strand, 33202963 - 33203020
Alignment:
Q  32 gacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcat 89  Q
    ||||||| |||| |||||||| | ||||| ||||||||||||||| | ||||||||||    
T  33202963 gacacgatacatatccgacaccgtgacacgcctaatccgaggagtatatgtgcttcat 33203020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 93
Target Start/End: Original strand, 36906056 - 36906128
Alignment:
Q  20 gtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatagat 93  Q
    ||||| || ||||||||||| |  ||| |||||||||||||||||||| | | ||||||| |||||||||||||    
T  36906056 gtgtcagtgtcggacacgacccgcgtctgacactgggacacacctaatgc-aagagtgtccgtgcttcatagat 36906128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 42
Target Start/End: Original strand, 44482278 - 44482311
Alignment:
Q  9 gtgtcggtgtcgtgtcggtatcggacacgacaca 42  Q
    ||||||||||||||||||| ||||||||||||||    
T  44482278 gtgtcggtgtcgtgtcggtgtcggacacgacaca 44482311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 47 - 91
Target Start/End: Complemental strand, 22881611 - 22881567
Alignment:
Q  47 cgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    |||||| |||||||  ||||||||||||||||| |||||||||||    
T  22881611 cgacaccgggacacgtctaatccgaggagtgtccgtgcttcatag 22881567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 55 - 91
Target Start/End: Original strand, 22947813 - 22947849
Alignment:
Q  55 ggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    |||||| |||||||||||||||||| |||||||||||    
T  22947813 ggacacgcctaatccgaggagtgtccgtgcttcatag 22947849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 43 - 91
Target Start/End: Complemental strand, 29144368 - 29144320
Alignment:
Q  43 tgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    |||||||||| || |||| |||||||||| ||||||| |||||||||||    
T  29144368 tgtccgacaccggaacacgcctaatccgaagagtgtccgtgcttcatag 29144320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 37 - 93
Target Start/End: Complemental strand, 34712377 - 34712321
Alignment:
Q  37 gacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatagat 93  Q
    ||||| ||||| ||||||||||||  ||||| | ||||||||| |||||||||||||    
T  34712377 gacacgtgtcctacactgggacacgtctaattcaaggagtgtccgtgcttcatagat 34712321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 43 - 91
Target Start/End: Original strand, 34741918 - 34741965
Alignment:
Q  43 tgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    |||||||||| ||||||| |||||||||| ||||||| |||||||||||    
T  34741918 tgtccgacac-gggacacgcctaatccgaagagtgtccgtgcttcatag 34741965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 47 - 91
Target Start/End: Original strand, 36878541 - 36878585
Alignment:
Q  47 cgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    |||||| ||||||| |||||||| ||||||||| |||||||||||    
T  36878541 cgacacggggacacgcctaatcccaggagtgtccgtgcttcatag 36878585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 43 - 91
Target Start/End: Original strand, 43113005 - 43113053
Alignment:
Q  43 tgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    |||| ||||| ||||||||||||||| || ||| |||||||||||||||    
T  43113005 tgtctgacaccgggacacacctaatctgaagagagtctgtgcttcatag 43113053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 43 - 91
Target Start/End: Complemental strand, 46940796 - 46940748
Alignment:
Q  43 tgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    |||||||||| || |||| |||||||||||||||||  |||||||||||    
T  46940796 tgtccgacaccggaacacgcctaatccgaggagtgttcgtgcttcatag 46940748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 43 - 87
Target Start/End: Complemental strand, 48040462 - 48040418
Alignment:
Q  43 tgtccgacactgggacacacctaatccgaggagtgtctgtgcttc 87  Q
    |||||||||||||||||| ||||||  |||||||||| |||||||    
T  48040462 tgtccgacactgggacacgcctaattggaggagtgtccgtgcttc 48040418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 245; Significance: 1e-135; HSPs: 61)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 245; E-Value: 1e-135
Query Start/End: Original strand, 281 - 553
Target Start/End: Original strand, 1634445 - 1634717
Alignment:
Q  281 ataaaagaaatacttggagaggtgtcgggggcgatcaaggcaacaccgtgttcggaagcggcacgttgagcaccggatttgaagatgaaattctcatcgg 380  Q
    |||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  1634445 ataaaaaaattacttggagaggtgtcgggggcgatcaaggcaacaccgtgttcggaagcggcacgttgagcaccggatttgaaaatgaaattctcgtcgg 1634544  T
Q  381 tgcaagtgagaccagagagccaataaagaactgggaatgatttgttggaatcagaattgggaaagtaaatgtggaagttcattgaacaaccaagtgtgtt 480  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1634545 tacaagtgagaccagagagccaataaagaactgggaatgatttgttggaatcagaattgggaaagtaaatgtggaagttcattgaacaaccaagtgtgtt 1634644  T
Q  481 actgtaatgtttgtatctcttgttgtatcctccgaacatcttcacactactcaactccgtctctgctcctcct 553  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||    
T  1634645 actgtaatgtttgtatctcttgttgtatcctccgaacatcttcccactactcaactccgtcactgctcctcct 1634717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 19482708 - 19482798
Alignment:
Q  1 aattacaagtgtcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    |||||||||||| |||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||  |||||||||||    
T  19482708 aattacaagtgttggtgtcgtgtcggtattggacacgacacgtgtccgacactgggacacacctaatccgaggagtgttcgtgcttcatag 19482798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 30982897 - 30982808
Alignment:
Q  1 aattacaagtgtcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcata 90  Q
    ||||| ||||||||||||||||||||| || |||||||||| |||||||||| ||||||| |||||||| | ||||||| ||||||||||    
T  30982897 aattataagtgtcggtgtcgtgtcggtgtcagacacgacacgtgtccgacaccgggacacgcctaatccaaagagtgtccgtgcttcata 30982808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 31 - 95
Target Start/End: Original strand, 29205527 - 29205591
Alignment:
Q  31 ggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatagataa 95  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||  |||||||||||||||    
T  29205527 ggacacgacacatgtccgacactgggacacgcctaatccgaggagtgttcgtgcttcatagataa 29205591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 20 - 91
Target Start/End: Complemental strand, 23292997 - 23292926
Alignment:
Q  20 gtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    |||||||| ||||||||||||| |||||||||| ||||||| |||||||||||||||||| |||||||||||    
T  23292997 gtgtcggtgtcggacacgacacgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcatag 23292926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 20 - 89
Target Start/End: Original strand, 4157197 - 4157266
Alignment:
Q  20 gtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcat 89  Q
    |||||||| |||||||||||||||||||||||| | || ||||||||| |||||||||||||||||||||    
T  4157197 gtgtcggtgtcggacacgacacatgtccgacaccgagaaacacctaattcgaggagtgtctgtgcttcat 4157266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 33 - 93
Target Start/End: Complemental strand, 715603 - 715543
Alignment:
Q  33 acacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatagat 93  Q
    |||||||||||||||||||| ||||||| |||||||||||||||||| |||||||||||||    
T  715603 acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatagat 715543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 33 - 93
Target Start/End: Complemental strand, 752929 - 752869
Alignment:
Q  33 acacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatagat 93  Q
    |||||||||||||||||||| ||||||| |||||||||||||||||| |||||||||||||    
T  752929 acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatagat 752869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 154 - 214
Target Start/End: Original strand, 1634325 - 1634385
Alignment:
Q  154 acataccaacaccaaagtcccaggaatcagcttcaccatcaacattcaagcctcctgtatt 214  Q
    |||||||||||||||||||||||||||| |||||||| ||||||||||| |||||||||||    
T  1634325 acataccaacaccaaagtcccaggaatcggcttcaccttcaacattcaaacctcctgtatt 1634385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 12 - 91
Target Start/End: Complemental strand, 5414180 - 5414101
Alignment:
Q  12 tcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    ||||||||||||| || ||||||||||||| |||| ||||| ||||||||||| |||| ||||||||| |||||||||||    
T  5414180 tcggtgtcgtgtcagtgtcggacacgacacgtgtctgacacagggacacaccttatccaaggagtgtccgtgcttcatag 5414101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 20 - 91
Target Start/End: Complemental strand, 28964259 - 28964188
Alignment:
Q  20 gtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    ||||| || ||||||||||||||| |||||||||||||||| ||||||||||||||||||  ||||||||||    
T  28964259 gtgtctgtgtcggacacgacacatatccgacactgggacacgcctaatccgaggagtgtccatgcttcatag 28964188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 3947785 - 3947702
Alignment:
Q  1 aattacaagtgtcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcata 90  Q
    ||||||||||||| ||||||||||||      ||||||||| ||||||||||  ||||||||||||||||||||||||| ||||||||||    
T  3947785 aattacaagtgtcagtgtcgtgtcgg------acacgacacgtgtccgacaccaggacacacctaatccgaggagtgtccgtgcttcata 3947702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 9 - 91
Target Start/End: Complemental strand, 22234901 - 22234819
Alignment:
Q  9 gtgtcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    ||||||||||||||||||| || |||||||||| ||||||||||  ||||||| |||||||||| |||||  |||||||||||    
T  22234901 gtgtcggtgtcgtgtcggtgtctgacacgacacgtgtccgacaccaggacacagctaatccgagaagtgttcgtgcttcatag 22234819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 847991 - 848080
Alignment:
Q  1 aattacaagtgtcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcata 90  Q
    ||||||||||||||||||| ||| ||| |||||||||| || ||||  |||| |||||||||||||||| ||||||||| ||| ||||||    
T  847991 aattacaagtgtcggtgtcttgttggtgtcggacacgaaacgtgtcgaacaccgggacacacctaatccaaggagtgtccgtgtttcata 848080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 15 - 91
Target Start/End: Original strand, 16184874 - 16184950
Alignment:
Q  15 gtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    ||||||||||||| ||| | ||||  | |||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  16184874 gtgtcgtgtcggtgtcgcatacgatgcctgtccgacactgggacacgcctaatccgaggagtgtttgtgcttcatag 16184950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 20 - 91
Target Start/End: Original strand, 16073442 - 16073513
Alignment:
Q  20 gtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    |||||||| |||||||||| ||||||||||||||  ||||| ||||||||||||||||||  ||||||||||    
T  16073442 gtgtcggtgtcggacacgatacatgtccgacactaagacacgcctaatccgaggagtgtccatgcttcatag 16073513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 4 - 91
Target Start/End: Complemental strand, 24613717 - 24613630
Alignment:
Q  4 tacaagtgtcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    |||||||||||||||| ||||||| || |||||||||| |||| |||||  ||||||  ||||||| ||||||||| |||||||||||    
T  24613717 tacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtctgacaccaggacacgtctaatcctaggagtgtccgtgcttcatag 24613630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 17 - 91
Target Start/End: Complemental strand, 53381605 - 53381530
Alignment:
Q  17 gtcgtgtcggtatcggacac-gacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    ||||||||||| |||||||| ||| | | |||||||| |||||||||||||||||||||||||| |||||||||||    
T  53381605 gtcgtgtcggtgtcggacactgacgcgtatccgacaccgggacacacctaatccgaggagtgtccgtgcttcatag 53381530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 33 - 91
Target Start/End: Complemental strand, 3064926 - 3064868
Alignment:
Q  33 acacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    |||||||||||||||||| ||| ||||| |||||||||||||||||| |||||||||||    
T  3064926 acacgacacatgtccgactctgagacacgcctaatccgaggagtgtccgtgcttcatag 3064868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 20 - 89
Target Start/End: Original strand, 4157484 - 4157553
Alignment:
Q  20 gtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcat 89  Q
    |||||||| |||||||||||||||||||||||| | || || |||||| |||||||||||| ||||||||    
T  4157484 gtgtcggtgtcggacacgacacatgtccgacaccgagaaacgcctaattcgaggagtgtctatgcttcat 4157553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 20 - 92
Target Start/End: Original strand, 21945551 - 21945623
Alignment:
Q  20 gtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcataga 92  Q
    |||||||| ||||||| |||||||||||||||| |  |||| ||||||||||||||||||| |||||| ||||    
T  21945551 gtgtcggtgtcggacatgacacatgtccgacaccgcaacacgcctaatccgaggagtgtctatgcttcttaga 21945623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 47264026 - 47264118
Alignment:
Q  1 aattacaagtgtcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatagat 93  Q
    |||||||| ||||| |||| ||| ||| || || |||||||||||| |||||  |||||| |||||||||| ||| |||||||||||||||||    
T  47264026 aattacaaatgtcgatgtcatgttggtgtcagatacgacacatgtctgacaccaggacacgcctaatccgaagagcgtctgtgcttcatagat 47264118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 37 - 88
Target Start/End: Original strand, 28084589 - 28084640
Alignment:
Q  37 gacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttca 88  Q
    ||||| |||||||||||||||||| |||||||||||||||||| ||||||||    
T  28084589 gacacgtgtccgacactgggacacgcctaatccgaggagtgtccgtgcttca 28084640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 29 - 91
Target Start/End: Original strand, 35161093 - 35161155
Alignment:
Q  29 tcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    ||||||||||||| |||||||||| || |||||||||||||||  |||||| |||||||||||    
T  35161093 tcggacacgacacgtgtccgacaccggaacacacctaatccgaaaagtgtccgtgcttcatag 35161155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 9 - 91
Target Start/End: Complemental strand, 46084002 - 46083920
Alignment:
Q  9 gtgtcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    |||||||||||||||| |||||||||||||||| |||| ||| | ||||||| ||| ||  ||||||||||  ||||||||||    
T  46084002 gtgtcggtgtcgtgtcagtatcggacacgacacgtgtctgacgcggggacacgccttataagaggagtgtccatgcttcatag 46083920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 20 - 93
Target Start/End: Complemental strand, 2361986 - 2361913
Alignment:
Q  20 gtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatagat 93  Q
    |||||||| ||||||||||| | |||| ||||| | ||||||||||||| || ||||||| |||||||||||||    
T  2361986 gtgtcggtgtcggacacgactcgtgtctgacaccgagacacacctaatctgacgagtgtccgtgcttcatagat 2361913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 30838250 - 30838335
Alignment:
Q  1 aattacaagtgtcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgctt 86  Q
    ||||| |||| ||||||||||||| || |||||| |||||| ||||||||||   ||||| ||||| |||||||||||| ||||||    
T  30838250 aattataagtatcggtgtcgtgtcagtgtcggacgcgacacgtgtccgacaccaagacacgcctaacccgaggagtgtccgtgctt 30838335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 20 - 93
Target Start/End: Original strand, 49431074 - 49431147
Alignment:
Q  20 gtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatagat 93  Q
    |||||||| ||||||||||||| ||||| |||| ||||||| ||| ||||||||||||||  ||||| ||||||    
T  49431074 gtgtcggtgtcggacacgacacgtgtccaacaccgggacacgccttatccgaggagtgtccatgctttatagat 49431147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 9 - 93
Target Start/End: Complemental strand, 5225624 - 5225540
Alignment:
Q  9 gtgtcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatagat 93  Q
    ||||||||||||||| ||| |||||||||| |||| || ||| | ||||||| |||||||   ||||| ||||||||||||||||    
T  5225624 gtgtcggtgtcgtgttggtgtcggacacgatacatatcggaccccgggacacgcctaatctatggagtatctgtgcttcatagat 5225540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 9 - 92
Target Start/End: Original strand, 11931328 - 11931411
Alignment:
Q  9 gtgtcggtgtcgtgtcggtatcggacac-gacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcataga 92  Q
    |||||| |||| ||||||||||| |||| ||| ||||||||||||  |||||||||||||||  |||||||| ||||||||||||    
T  11931328 gtgtcgatgtcatgtcggtatcg-acaccgacgcatgtccgacaccaggacacacctaatccatggagtgtccgtgcttcataga 11931411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 11 - 91
Target Start/End: Complemental strand, 15724563 - 15724483
Alignment:
Q  11 gtcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    ||||||||||||||||| |||||||| |||| |||| |||||    |||| ||||||||||||||| | ||||||||||||    
T  15724563 gtcggtgtcgtgtcggtgtcggacacaacacgtgtcagacaccaaaacacgcctaatccgaggagtttatgtgcttcatag 15724483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 43 - 91
Target Start/End: Original strand, 17876237 - 17876285
Alignment:
Q  43 tgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    ||||||||||  ||||||||||||||| |||||||||||||||||||||    
T  17876237 tgtccgacaccaggacacacctaatccaaggagtgtctgtgcttcatag 17876285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 93
Target Start/End: Original strand, 24343554 - 24343634
Alignment:
Q  14 ggtgtcgtgtcggtatcggacac-gacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatagat 93  Q
    |||||||||||||| || ||||| ||| | |||||||||| ||||||| |||| || |||||||||| |||||||||||||    
T  24343554 ggtgtcgtgtcggtgtccgacaccgacgcgtgtccgacaccgggacacgcctattctgaggagtgtccgtgcttcatagat 24343634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 20 - 92
Target Start/End: Complemental strand, 34306815 - 34306743
Alignment:
Q  20 gtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcataga 92  Q
    |||||||| ||||||||||||| |||||||||| | ||||| ||||||| ||||| |||  ||||||||||||    
T  34306815 gtgtcggtgtcggacacgacacgtgtccgacaccgagacacgcctaatctgaggaatgttcgtgcttcataga 34306743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 43 - 90
Target Start/End: Complemental strand, 5922579 - 5922532
Alignment:
Q  43 tgtccgacactgggacacacctaatccgaggagtgtctgtgcttcata 90  Q
    |||||||||||||||||| ||||||| ||||||||||| |||||||||    
T  5922579 tgtccgacactgggacacgcctaatctgaggagtgtctctgcttcata 5922532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 20 - 91
Target Start/End: Complemental strand, 12895285 - 12895214
Alignment:
Q  20 gtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    |||||||| ||||||||||||  | |||||||  ||||||| |||||||||||||||||  |||||||||||    
T  12895285 gtgtcggtgtcggacacgacatgtatccgacatcgggacacgcctaatccgaggagtgttcgtgcttcatag 12895214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 20 - 91
Target Start/End: Complemental strand, 35157996 - 35157925
Alignment:
Q  20 gtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    |||||||| || |||||||||||||||| |||| || |||| | ||||||||| |||||| |||||||||||    
T  35157996 gtgtcggtgtctgacacgacacatgtccaacaccggaacacgcttaatccgagaagtgtccgtgcttcatag 35157925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 48 - 91
Target Start/End: Original strand, 40784029 - 40784072
Alignment:
Q  48 gacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    ||||| |||||||||||||||||||||||||| |||||||||||    
T  40784029 gacaccgggacacacctaatccgaggagtgtccgtgcttcatag 40784072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 14 - 91
Target Start/End: Complemental strand, 944680 - 944602
Alignment:
Q  14 ggtgtcgtgtcggtatcggacac-gacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    ||||||||||| || ||| |||| ||| | |||||||||| ||||||||||||||| ||||||| |||| |||||||||    
T  944680 ggtgtcgtgtcagtgtcgaacacagacgcgtgtccgacaccgggacacacctaatctgaggagtctctgagcttcatag 944602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 21 - 91
Target Start/End: Complemental strand, 8423728 - 8423658
Alignment:
Q  21 tgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    ||||||| ||||||||||||  |||||||||| ||||||| ||||||| ||| |||||| |||| ||||||    
T  8423728 tgtcggtgtcggacacgacagctgtccgacaccgggacacgcctaatcggagaagtgtccgtgcgtcatag 8423658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 32 - 90
Target Start/End: Complemental strand, 14465064 - 14465006
Alignment:
Q  32 gacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcata 90  Q
    |||||||||| ||| ||||||||||||||  |||||| |||||||||| ||||||||||    
T  14465064 gacacgacacgtgttcgacactgggacacgtctaatctgaggagtgtccgtgcttcata 14465006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 43 - 89
Target Start/End: Complemental strand, 22440605 - 22440559
Alignment:
Q  43 tgtccgacactgggacacacctaatccgaggagtgtctgtgcttcat 89  Q
    ||||||||||| |||||| |||||||||||||||||| |||||||||    
T  22440605 tgtccgacactaggacacgcctaatccgaggagtgtccgtgcttcat 22440559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 32 - 93
Target Start/End: Original strand, 36635390 - 36635451
Alignment:
Q  32 gacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatagat 93  Q
    ||||||||||  ||| ||||| ||||||| |||||||||| ||||||| |||||||||||||    
T  36635390 gacacgacacgcgtcagacaccgggacacgcctaatccgaagagtgtccgtgcttcatagat 36635451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 12 - 91
Target Start/End: Original strand, 7012117 - 7012197
Alignment:
Q  12 tcggtgtcgtgtcggtatcggacac-gacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    ||||||| |||||||| |||||||| ||| | | |||||||| |||  ||||||||| ||||||||||| |||||||||||    
T  7012117 tcggtgttgtgtcggtgtcggacaccgacgcgtatccgacaccggggaacacctaatgcgaggagtgtccgtgcttcatag 7012197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 19312375 - 19312463
Alignment:
Q  1 aattacaagtgtcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcat 89  Q
    ||||| |||| |||||||||||||| | ||||| ||||||| |||||||||| | |||||  |||||| ||| |||||| ||| |||||    
T  19312375 aattataagtatcggtgtcgtgtcgttgtcggatacgacacgtgtccgacaccgagacacgtctaatctgagaagtgtccgtgtttcat 19312463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 55 - 90
Target Start/End: Complemental strand, 17425383 - 17425348
Alignment:
Q  55 ggacacacctaatccgaggagtgtctgtgcttcata 90  Q
    |||||| |||||||||||||||||||||||||||||    
T  17425383 ggacacgcctaatccgaggagtgtctgtgcttcata 17425348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 91
Target Start/End: Complemental strand, 30103368 - 30103297
Alignment:
Q  20 gtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    |||||||| ||  |||||||| ||||| ||||   ||||||| |||||||||||||||||| ||||||||||    
T  30103368 gtgtcggtgtcaaacacgacatatgtctgacatcaggacacatctaatccgaggagtgtctctgcttcatag 30103297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 60
Target Start/End: Original strand, 37496748 - 37496803
Alignment:
Q  5 acaagtgtcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacac 60  Q
    |||||||||||||| |||||| |  ||||||||||||||||| ||||| |||||||    
T  37496748 acaagtgtcggtgttgtgtcgttgccggacacgacacatgtcggacaccgggacac 37496803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 53490783 - 53490732
Alignment:
Q  1 aattacaagtgtcggtgtcgtgtcggtatcggacacgacacatgtccgacac 52  Q
    ||||||||||||| || |||||||||| |||||||||||| |||||| ||||    
T  53490783 aattacaagtgtcagtatcgtgtcggtgtcggacacgacaaatgtccaacac 53490732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 3144622 - 3144584
Alignment:
Q  56 gacacacctaatccgaggagtgtctgtgcttcatagata 94  Q
    ||||||||||||||||| |||||| ||||||||||||||    
T  3144622 gacacacctaatccgagaagtgtccgtgcttcatagata 3144584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 20 - 90
Target Start/End: Original strand, 12323968 - 12324038
Alignment:
Q  20 gtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcata 90  Q
    |||||||| ||||||| ||||| |||  | ||| || |||||||| |||||||||||||| ||||||||||    
T  12323968 gtgtcggtgtcggacatgacacgtgtgtggcacgggaacacaccttatccgaggagtgtccgtgcttcata 12324038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 903979 - 904052
Alignment:
Q  18 tcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    |||| ||||| | ||||||||||  ||||||||||||||||||| ||||||| || | ||||  ||||||||||    
T  903979 tcgtatcggtgttggacacgacatgtgtccgacactgggacacatctaatccaagaaatgtccttgcttcatag 904052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 54 - 91
Target Start/End: Complemental strand, 5775341 - 5775304
Alignment:
Q  54 gggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    ||||||| |||||||||||||||||| |||||||||||    
T  5775341 gggacacgcctaatccgaggagtgtccgtgcttcatag 5775304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 91
Target Start/End: Complemental strand, 7214523 - 7214466
Alignment:
Q  34 cacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    ||||||||||||||||||| |||| |  |||||||||| || ||| ||||||||||||    
T  7214523 cacgacacatgtccgacaccgggaaatgcctaatccgatgattgtttgtgcttcatag 7214466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 44 - 93
Target Start/End: Original strand, 37203324 - 37203373
Alignment:
Q  44 gtccgacactgggacacacctaatccgaggagtgtctgtgcttcatagat 93  Q
    ||||||||| |||||||  |||||||||| |||||| |||||||||||||    
T  37203324 gtccgacaccgggacacgtctaatccgagaagtgtccgtgcttcatagat 37203373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 10415157 - 10415121
Alignment:
Q  1 aattacaagtgtcggtgtcgtgtcggtatcggacacg 37  Q
    ||||||| |||||||||||||||| ||||||||||||    
T  10415157 aattacatgtgtcggtgtcgtgtcagtatcggacacg 10415121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 43 - 91
Target Start/End: Complemental strand, 11596345 - 11596297
Alignment:
Q  43 tgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    |||||||||  ||||||| ||||||| |||||||||| |||||||||||    
T  11596345 tgtccgacatcgggacacgcctaatctgaggagtgtccgtgcttcatag 11596297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 43 - 91
Target Start/End: Complemental strand, 18513223 - 18513175
Alignment:
Q  43 tgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    ||||||||||  |||||| ||||||| |||||||||| |||||||||||    
T  18513223 tgtccgacaccaggacacgcctaatctgaggagtgtccgtgcttcatag 18513175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 29205492 - 29205532
Alignment:
Q  20 gtgtcggtatcggacacgacacatgtccgacactgggacac 60  Q
    |||||||| | |||||||||||||||||||||| |||||||    
T  29205492 gtgtcggtgttggacacgacacatgtccgacaccgggacac 29205532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 29 - 93
Target Start/End: Complemental strand, 32273523 - 32273459
Alignment:
Q  29 tcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatagat 93  Q
    ||||||||||||| | ||||| || |||||||  | ||||| ||||||||| |||||||||||||    
T  32273523 tcggacacgacacgtatccgatacggggacacgacaaatccaaggagtgtcggtgcttcatagat 32273459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 37 - 93
Target Start/End: Original strand, 42640589 - 42640645
Alignment:
Q  37 gacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatagat 93  Q
    ||||| |||||| |||  |||||| ||||||||||||||| || |||||||||||||    
T  42640589 gacacgtgtccggcaccaggacacgcctaatccgaggagtttccgtgcttcatagat 42640645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 77; Significance: 2e-35; HSPs: 49)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 26769551 - 26769643
Alignment:
Q  1 aattacaagtgtcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatagat 93  Q
    ||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||| |||||||||||||    
T  26769551 aattacaagtgtcggtgtcatgtcggtatcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtgtccgtgcttcatagat 26769643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 9 - 94
Target Start/End: Complemental strand, 34784993 - 34784908
Alignment:
Q  9 gtgtcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatagata 94  Q
    ||||||||||||||||||||||||||||||||| |||| ||||| ||||||| ||| || ||||||||||||||||||||||||||    
T  34784993 gtgtcggtgtcgtgtcggtatcggacacgacacctgtctgacacggggacacgccttattcgaggagtgtctgtgcttcatagata 34784908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 37419783 - 37419873
Alignment:
Q  1 aattacaagtgtcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    ||||||||||| ||||||||||||||| ||||||||||  | |||||||||| ||||||| |||||||||||||||||| |||||||||||    
T  37419783 aattacaagtgccggtgtcgtgtcggtgtcggacacgatgcgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcatag 37419873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 20 - 91
Target Start/End: Complemental strand, 18841024 - 18840953
Alignment:
Q  20 gtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    |||||||| || ||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||    
T  18841024 gtgtcggtgtcagacacgacacatgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcatag 18840953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 30717549 - 30717459
Alignment:
Q  1 aattacaagtgtcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    |||||||||||||| |||||||||| | ||||||||||||| ||| ||||||||||| || |||||||| ||||||||| |||||||||||    
T  30717549 aattacaagtgtcgatgtcgtgtcgttgtcggacacgacacgtgttcgacactgggatacgcctaatccaaggagtgtccgtgcttcatag 30717459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 20 - 89
Target Start/End: Complemental strand, 2438730 - 2438661
Alignment:
Q  20 gtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcat 89  Q
    |||||||| |||||||||||||||||||||||| ||||||| |||||||||||||||||| |||||||||    
T  2438730 gtgtcggtgtcggacacgacacatgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcat 2438661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 12668442 - 12668350
Alignment:
Q  1 aattacaagtgtcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatagat 93  Q
    ||||| ||||||||||||||||||||||| ||| ||||||| | || |||| ||||||||||||||| |||||||| || |||||||||||||    
T  12668442 aattataagtgtcggtgtcgtgtcggtattggatacgacacgtatctgacattgggacacacctaattcgaggagtatccgtgcttcatagat 12668350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 11223882 - 11223792
Alignment:
Q  1 aattacaagtgtcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcataga 92  Q
    ||||||||||||||||||| ||| ||| ||||||||||||| |||| ||||| ||||||| ||||||| |||||||||| ||||||||||||    
T  11223882 aattacaagtgtcggtgtcatgtaggtgtcggacacgacac-tgtctgacaccgggacacgcctaatctgaggagtgtccgtgcttcataga 11223792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 20 - 90
Target Start/End: Original strand, 28596517 - 28596587
Alignment:
Q  20 gtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcata 90  Q
    |||||||| ||||||||||||| ||||||||||| |||||| |||||||||||||||||| ||||||||||    
T  28596517 gtgtcggtgtcggacacgacacgtgtccgacactcggacactcctaatccgaggagtgtccgtgcttcata 28596587  T

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Target: chr2; HSP #10
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 9 - 91
Target Start/End: Original strand, 35056916 - 35056998
Alignment:
Q  9 gtgtcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    ||||||||||||||||||| ||||||||||||| |||||||||| |  |||| ||||||| |||||||||| |||||||||||    
T  35056916 gtgtcggtgtcgtgtcggtgtcggacacgacacgtgtccgacacggaaacacgcctaatctgaggagtgtccgtgcttcatag 35056998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 9 - 90
Target Start/End: Original strand, 44860368 - 44860449
Alignment:
Q  9 gtgtcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcata 90  Q
    ||||||||||||||| ||| | ||||||||||  |||||||||  |||||||||||||| ||||||||||| ||||||||||    
T  44860368 gtgtcggtgtcgtgttggtgttggacacgacatgtgtccgacatcgggacacacctaattcgaggagtgtccgtgcttcata 44860449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 36756363 - 36756275
Alignment:
Q  1 aattacaagtgtcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcat 89  Q
    ||||| |||||||||||||||||  || ||| |||| ||||||||||||||| |  |||| |||||||| |||||||||||||||||||    
T  36756363 aattataagtgtcggtgtcgtgttagtgtcgaacacaacacatgtccgacaccgcaacacgcctaatcctaggagtgtctgtgcttcat 36756275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 20 - 91
Target Start/End: Original strand, 15972921 - 15972992
Alignment:
Q  20 gtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    |||||||| ||||||||||||| |||||||| | |||||||||||||||||| || |||| |||||||||||    
T  15972921 gtgtcggtgtcggacacgacacgtgtccgacgccgggacacacctaatccgaagaatgtccgtgcttcatag 15972992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 20 - 86
Target Start/End: Original strand, 12224271 - 12224337
Alignment:
Q  20 gtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgctt 86  Q
    |||||||| |||||||||| || |||||||||||||||||| |||||||| |||||||| |||||||    
T  12224271 gtgtcggtgtcggacacgatacgtgtccgacactgggacacgcctaatccaaggagtgtttgtgctt 12224337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 4882715 - 4882626
Alignment:
Q  1 aattacaagtgtcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcata 90  Q
    |||||||||||||| |||||||||||| || ||||||| ||||||| | |||  | ||||||||||| |||||||| ||| |||||||||    
T  4882715 aattacaagtgtcgatgtcgtgtcggtgtcagacacgatacatgtcgggcacctgaacacacctaattcgaggagtatctatgcttcata 4882626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 15657904 - 15657992
Alignment:
Q  1 aattacaagtgtcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcat 89  Q
    |||||||| |||||||||||||| | | |||||| |||||| |||||||| | ||||||| |||| |||||||||||||  ||||||||    
T  15657904 aattacaaatgtcggtgtcgtgttgatgtcggacgcgacacgtgtccgacgccgggacacgcctagtccgaggagtgtccatgcttcat 15657992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 20 - 92
Target Start/End: Original strand, 24009343 - 24009415
Alignment:
Q  20 gtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcataga 92  Q
    |||||||| ||||||||||||| |||| ||||| ||||||| ||| |||| ||||||||| ||||||||||||    
T  24009343 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcataga 24009415  T

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Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 7 - 91
Target Start/End: Original strand, 27084304 - 27084388
Alignment:
Q  7 aagtgtcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    |||||||| | || ||||||| ||||||||||||| ||||| |||| | ||||| ||||||| ||||||||||| ||||||||||    
T  27084304 aagtgtcgatttcatgtcggtgtcggacacgacacgtgtccaacaccgagacacgcctaatcggaggagtgtctctgcttcatag 27084388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 20 - 91
Target Start/End: Complemental strand, 38117170 - 38117099
Alignment:
Q  20 gtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    |||| ||| |||||||| |||| |||||||||| ||||||| |||||||||||| ||||| |||||||||||    
T  38117170 gtgttggtgtcggacacaacacgtgtccgacaccgggacacgcctaatccgaggggtgtccgtgcttcatag 38117099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 11 - 93
Target Start/End: Complemental strand, 24975334 - 24975253
Alignment:
Q  11 gtcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatagat 93  Q
    |||||||||||||| || || ||||| |||  ||||||||||||||||| | |||||| |||||||||| |||||||||||||    
T  24975334 gtcggtgtcgtgtccgtgtcagacac-acatgtgtccgacactgggacaaatctaatctgaggagtgtccgtgcttcatagat 24975253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 16 - 90
Target Start/End: Complemental strand, 27286296 - 27286222
Alignment:
Q  16 tgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcata 90  Q
    |||| ||||| | |||||||||||||||||||||||| |||||| | ||||||  | ||||||||||||||||||    
T  27286296 tgtcatgtcgatgtcggacacgacacatgtccgacaccgggacatatctaatctaaagagtgtctgtgcttcata 27286222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 29 - 91
Target Start/End: Original strand, 41843503 - 41843565
Alignment:
Q  29 tcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    |||||| |||||| |||||||||| ||||||| | | ||||||||||||||||||||||||||    
T  41843503 tcggacgcgacacgtgtccgacacggggacacgctttatccgaggagtgtctgtgcttcatag 41843565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 29 - 91
Target Start/End: Complemental strand, 42511384 - 42511322
Alignment:
Q  29 tcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    |||||||| |||| |||||||||| |||||||  ||||||||||||||||| |||||||||||    
T  42511384 tcggacacaacacgtgtccgacacagggacacggctaatccgaggagtgtccgtgcttcatag 42511322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 10 - 91
Target Start/End: Complemental strand, 36096385 - 36096304
Alignment:
Q  10 tgtcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    |||||||||||||||| | ||||||||||||| |||| ||||| ||||||| ||| | || | ||||||| |||||||||||    
T  36096385 tgtcggtgtcgtgtcgatgtcggacacgacacgtgtctgacacggggacacgccttaaccaaagagtgtccgtgcttcatag 36096304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 20 - 92
Target Start/End: Original strand, 37559025 - 37559097
Alignment:
Q  20 gtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcataga 92  Q
    |||||||| ||||||  ||||| |||||||||| || |||| | |||||||||||||||| ||||||||||||    
T  37559025 gtgtcggtgtcggacttgacacgtgtccgacaccggtacacgcttaatccgaggagtgtccgtgcttcataga 37559097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 20 - 91
Target Start/End: Complemental strand, 20242738 - 20242667
Alignment:
Q  20 gtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    |||||||| |||||||| |||| |||| |||||  |||||| ||| |||||| |||||||||||||||||||    
T  20242738 gtgtcggtgtcggacacaacacgtgtctgacacgaggacacgccttatccgaagagtgtctgtgcttcatag 20242667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 20 - 87
Target Start/End: Complemental strand, 37411255 - 37411188
Alignment:
Q  20 gtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttc 87  Q
    |||||| | ||| ||||||| | |||||||||||||||||| |||| ||||||||||| |||||||||    
T  37411255 gtgtcgatgtcgaacacgacgcgtgtccgacactgggacacgcctagtccgaggagtgcctgtgcttc 37411188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 18420453 - 18420363
Alignment:
Q  1 aattacaagtgtcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    ||||| |||||||||||| |||||  | ||||||| ||||  ||| ||||| |  ||||| ||||||||||| ||||||||||||||||||    
T  18420453 aattataagtgtcggtgttgtgtccatgtcggacatgacaagtgttcgacattatgacacgcctaatccgagaagtgtctgtgcttcatag 18420363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 7 - 93
Target Start/End: Complemental strand, 32749838 - 32749752
Alignment:
Q  7 aagtgtcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatagat 93  Q
    ||||||| ||||||||||| | ||||||  ||||  |||||||||||||||||| ||| |||  ||||||||| | |||||||||||    
T  32749838 aagtgtcagtgtcgtgtcgatgtcggacgtgacatgtgtccgacactgggacacgccttatctaaggagtgtccgcgcttcatagat 32749752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 42 - 91
Target Start/End: Original strand, 18622672 - 18622721
Alignment:
Q  42 atgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    |||||| |||| ||||||||| |||||||||||||||| |||||||||||    
T  18622672 atgtcctacaccgggacacacttaatccgaggagtgtccgtgcttcatag 18622721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 37 - 94
Target Start/End: Original strand, 28412422 - 28412479
Alignment:
Q  37 gacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatagata 94  Q
    ||||| ||||||||||||||||||  ||||| ||||||| ||| ||||||||||||||    
T  28412422 gacacgtgtccgacactgggacacggctaattcgaggagcgtcagtgcttcatagata 28412479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 56 - 93
Target Start/End: Complemental strand, 31285746 - 31285709
Alignment:
Q  56 gacacacctaatccgaggagtgtctgtgcttcatagat 93  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  31285746 gacacacctaatccgaggagtgtctgtgctttatagat 31285709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 21 - 89
Target Start/End: Original strand, 19942314 - 19942382
Alignment:
Q  21 tgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcat 89  Q
    ||||||| ||||||||| ||  |||| ||||| ||||||| ||||||||||||||||||  ||||||||    
T  19942314 tgtcggtgtcggacacggcatgtgtctgacaccgggacacgcctaatccgaggagtgtccatgcttcat 19942382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 92
Target Start/End: Complemental strand, 22084837 - 22084755
Alignment:
Q  13 cggtgtcgtgtcggtatcggacacgacacatgtccgacact---gggacacacctaatccgaggagtgtctgtgcttcataga 92  Q
    |||| ||||||| || |||||||| |||| |||| |||||    ||||||| |||||||||| ||||||||||||||||||||    
T  22084837 cggtatcgtgtcagtgtcggacacaacacgtgtctgacaccaccgggacacgcctaatccgatgagtgtctgtgcttcataga 22084755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 34337200 - 34337152
Alignment:
Q  1 aattacaagtgtcggtgtcgtgtcggtatcggacacgacacatgtccga 49  Q
    ||||||||||||||||||| ||||||| |||||||| |||| |||||||    
T  34337200 aattacaagtgtcggtgtcctgtcggtgtcggacacaacacgtgtccga 34337152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 36 - 91
Target Start/End: Complemental strand, 6180845 - 6180790
Alignment:
Q  36 cgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    |||| ||||||||| |||| ||||||||||||| ||||||| || |||||||||||    
T  6180845 cgactcatgtccgatactgagacacacctaatctgaggagtttccgtgcttcatag 6180790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 32 - 91
Target Start/End: Complemental strand, 15907910 - 15907851
Alignment:
Q  32 gacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    |||||||||||| |||||||| ||||||| || |||| || ||||||| |||||||||||    
T  15907910 gacacgacacatatccgacaccgggacacgcccaatctgatgagtgtccgtgcttcatag 15907851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 91
Target Start/End: Complemental strand, 18889602 - 18889519
Alignment:
Q  9 gtgtcggtgtcgtgtcggtatcggacac-gacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    ||||||||||| |||  || |||||||| ||| ||||||||||||  |||||||||||| || || ||||||| ||||||||||    
T  18889602 gtgtcggtgtcttgtttgtgtcggacaccgacgcatgtccgacacccggacacacctaacccaagtagtgtctctgcttcatag 18889519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 31 - 78
Target Start/End: Complemental strand, 29176493 - 29176446
Alignment:
Q  31 ggacacgacacatgtccgacactgggacacacctaatccgaggagtgt 78  Q
    ||||||| |||||||||||||||| |||||||||||||| || |||||    
T  29176493 ggacacggcacatgtccgacactgagacacacctaatccaagaagtgt 29176446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 91
Target Start/End: Complemental strand, 30404861 - 30404790
Alignment:
Q  20 gtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    |||||||  ||||||||||||||||||||||||  |||||  ||||||| ||| || || ||||||||||||    
T  30404861 gtgtcggcgtcggacacgacacatgtccgacaccaggacatgcctaatctgagaagcgtttgtgcttcatag 30404790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 91
Target Start/End: Complemental strand, 34993993 - 34993922
Alignment:
Q  20 gtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    ||||| || ||| ||||||||  |||||||||||||||||| |||||| | ||||||||  |||||||||||    
T  34993993 gtgtcagtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgcttcatag 34993922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 48 - 90
Target Start/End: Complemental strand, 3444869 - 3444827
Alignment:
Q  48 gacactgggacacacctaatccgaggagtgtctgtgcttcata 90  Q
    ||||||||||||  |||||||||||||||||| ||||||||||    
T  3444869 gacactgggacatgcctaatccgaggagtgtccgtgcttcata 3444827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 5367240 - 5367289
Alignment:
Q  20 gtgtcggtatcggacacgacacatgtccgacactgggacacacctaatcc 69  Q
    |||||||| ||||||||||||||| |||||| | ||||||| ||||||||    
T  5367240 gtgtcggtgtcggacacgacacatatccgactccgggacacgcctaatcc 5367289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 96
Target Start/End: Complemental strand, 19580293 - 19580220
Alignment:
Q  23 tcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatagataac 96  Q
    ||||| |||||||| |||| ||||| ||||    ||||| ||||||||| ||||||||||||||||||| ||||    
T  19580293 tcggtgtcggacacaacacgtgtccaacaccaaaacacatctaatccgaagagtgtctgtgcttcatagctaac 19580220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 59 - 92
Target Start/End: Original strand, 22557037 - 22557070
Alignment:
Q  59 acacctaatccgaggagtgtctgtgcttcataga 92  Q
    ||||||||||||| ||||||||||||||||||||    
T  22557037 acacctaatccgatgagtgtctgtgcttcataga 22557070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 58 - 91
Target Start/End: Complemental strand, 44770176 - 44770143
Alignment:
Q  58 cacacctaatccgaggagtgtctgtgcttcatag 91  Q
    |||||||||||||||||||||| |||||||||||    
T  44770176 cacacctaatccgaggagtgtcagtgcttcatag 44770143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 43 - 91
Target Start/End: Complemental strand, 18631399 - 18631351
Alignment:
Q  43 tgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    |||| ||||||||||||| |||||| ||||||||||| | |||||||||    
T  18631399 tgtcagacactgggacacgcctaatgcgaggagtgtccgagcttcatag 18631351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 15 - 91
Target Start/End: Original strand, 19980718 - 19980794
Alignment:
Q  15 gtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    |||||||||| ||  |||| | |||||||||||||||  | ||||||||||||||||| |||||   ||||||||||    
T  19980718 gtgtcgtgtctgtgccggatatgacacatgtccgacatcgagacacacctaatccgagaagtgttcatgcttcatag 19980794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 43 - 95
Target Start/End: Complemental strand, 29367331 - 29367279
Alignment:
Q  43 tgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatagataa 95  Q
    |||||||||| | ||||  ||||||||||||| ||| ||||||||||||||||    
T  29367331 tgtccgacaccgagacatgcctaatccgaggaatgtttgtgcttcatagataa 29367279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 75; Significance: 3e-34; HSPs: 50)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 8365538 - 8365448
Alignment:
Q  1 aattacaagtgtcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||| || |||||||||||    
T  8365538 aattacaagtgtcggtgtcgtgtcggtatcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtctccgtgcttcatag 8365448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 9107389 - 9107297
Alignment:
Q  1 aattacaagtgtcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatagat 93  Q
    ||||||||||||||||||||||||||| |||||||| ||   |||||||||| |||||||||||||||||||||||| | |||||||||||||    
T  9107389 aattacaagtgtcggtgtcgtgtcggtgtcggacacaacgtgtgtccgacaccgggacacacctaatccgaggagtgcccgtgcttcatagat 9107297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 9 - 91
Target Start/End: Complemental strand, 10339136 - 10339054
Alignment:
Q  9 gtgtcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    ||||| ||| ||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||| |||||||||||    
T  10339136 gtgtcagtgccgtgtcggtgtcggacacgacacatgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcatag 10339054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 16766737 - 16766827
Alignment:
Q  1 aattacaagtgtcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    ||||||||||||||||||||||||||| |||||||| |||| |||||||||| ||||||| |||||||||| || |||| |||||||||||    
T  16766737 aattacaagtgtcggtgtcgtgtcggtgtcggacacaacacgtgtccgacaccgggacacgcctaatccgaagaatgtccgtgcttcatag 16766827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 8714020 - 8714112
Alignment:
Q  1 aattacaagtgtcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatagat 93  Q
    |||||||| ||| |||||||||||||| ||||||||||||||| |||||||  ||||||| || |||||||||||||||| ||||||||||||    
T  8714020 aattacaaatgtgggtgtcgtgtcggtgtcggacacgacacatttccgacatcgggacacgcccaatccgaggagtgtctttgcttcatagat 8714112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 20 - 93
Target Start/End: Original strand, 34595182 - 34595255
Alignment:
Q  20 gtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatagat 93  Q
    |||||||| ||||||||||||| |||| ||||| |||||||||||||||||||||||||| |||||||||||||    
T  34595182 gtgtcggtgtcggacacgacacgtgtctgacaccgggacacacctaatccgaggagtgtccgtgcttcatagat 34595255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 5970127 - 5970035
Alignment:
Q  1 aattacaagtgtcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatagat 93  Q
    |||||||| ||| |||||||||||||| ||||||||||||||| |||||||  ||||||| || ||||||||||||| || ||||||||||||    
T  5970127 aattacaaatgtgggtgtcgtgtcggtgtcggacacgacacatttccgacatcgggacacgcccaatccgaggagtgactatgcttcatagat 5970035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 9 - 91
Target Start/End: Original strand, 10294155 - 10294237
Alignment:
Q  9 gtgtcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    ||||||||||||||| ||| ||||||||||||  ||||||| ||| ||||||| |||||| ||||||||||||||||||||||    
T  10294155 gtgtcggtgtcgtgttggtgtcggacacgacatgtgtccgaaactaggacacagctaatctgaggagtgtctgtgcttcatag 10294237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 9 - 91
Target Start/End: Original strand, 18367884 - 18367966
Alignment:
Q  9 gtgtcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    ||||||||||||||||||| || ||||||||||||||| ||||| ||||||| ||| |||| ||||||||| |||||||||||    
T  18367884 gtgtcggtgtcgtgtcggtgtcagacacgacacatgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 18367966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 9 - 92
Target Start/End: Original strand, 3209436 - 3209519
Alignment:
Q  9 gtgtcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcataga 92  Q
    |||||||||||||||| || ||| |||||||||  |||||||||  |||||| ||||||||||||||||| |||||||||||||    
T  3209436 gtgtcggtgtcgtgtcagtgtcgaacacgacacgcgtccgacacccggacacgcctaatccgaggagtgtttgtgcttcataga 3209519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 20 - 91
Target Start/End: Original strand, 4877991 - 4878061
Alignment:
Q  20 gtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    |||||||| ||||||||||||||||||||||||  |||||| |||||||||||||||||| |||||||||||    
T  4877991 gtgtcggtgtcggacacgacacatgtccgacac-aggacacgcctaatccgaggagtgtccgtgcttcatag 4878061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 20 - 88
Target Start/End: Complemental strand, 32978910 - 32978842
Alignment:
Q  20 gtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttca 88  Q
    |||||||| |||||||||||||||||||||||| |||||||  ||||||| ||||||||| ||||||||    
T  32978910 gtgtcggtgtcggacacgacacatgtccgacaccgggacacgtctaatccaaggagtgtccgtgcttca 32978842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 32 - 91
Target Start/End: Complemental strand, 8776967 - 8776908
Alignment:
Q  32 gacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    |||||||||| |||||||||| | |||||||||||||||||||||||| |||||||||||    
T  8776967 gacacgacacgtgtccgacaccgagacacacctaatccgaggagtgtccgtgcttcatag 8776908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 20 - 91
Target Start/End: Original strand, 28152146 - 28152217
Alignment:
Q  20 gtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    |||||||| ||||||||||||| |||||||||| ||||||  |||||||||||||||||  |||||||||||    
T  28152146 gtgtcggtgtcggacacgacacgtgtccgacaccgggacaggcctaatccgaggagtgttcgtgcttcatag 28152217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 29 - 91
Target Start/End: Complemental strand, 17327652 - 17327590
Alignment:
Q  29 tcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    ||||||||||||| |||| ||||| ||||||| |||||||||||||||||| |||||||||||    
T  17327652 tcggacacgacacgtgtctgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 17327590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 24 - 90
Target Start/End: Complemental strand, 17841596 - 17841530
Alignment:
Q  24 cggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcata 90  Q
    |||| ||||||||||||  |||||||||||| ||||| |||||||||||||||||| ||||||||||    
T  17841596 cggtgtcggacacgacatgtgtccgacactgagacacgcctaatccgaggagtgtccgtgcttcata 17841530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 12696364 - 12696446
Alignment:
Q  1 aattacaagtgtcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcat 89  Q
    ||||||||||||| ||||||||||||      ||||||||| |||| ||||| ||||||||||| |||| |||||||||||||||||||    
T  12696364 aattacaagtgtcagtgtcgtgtcgg------acacgacacgtgtctgacaccgggacacaccttatccaaggagtgtctgtgcttcat 12696446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 31384960 - 31385048
Alignment:
Q  1 aattacaagtgtcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcata 90  Q
    ||||||||||||| ||||||||| | | | ||||||||||| ||||| |||| ||||||| |||||||| ||||||||| ||||||||||    
T  31384960 aattacaagtgtcagtgtcgtgtag-tgttggacacgacacgtgtcctacaccgggacacgcctaatccaaggagtgtccgtgcttcata 31385048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 43 - 90
Target Start/End: Original strand, 31959221 - 31959268
Alignment:
Q  43 tgtccgacactgggacacacctaatccgaggagtgtctgtgcttcata 90  Q
    |||||||||| |||||||||||||||||||||||||| ||||||||||    
T  31959221 tgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcata 31959268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 9 - 91
Target Start/End: Complemental strand, 16488601 - 16488519
Alignment:
Q  9 gtgtcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    ||||||||||||||||||| ||||||||||||| |||| | ||| ||||||| ||| |||| |||| |||  |||||||||||    
T  16488601 gtgtcggtgtcgtgtcggtgtcggacacgacacgtgtctggcacggggacacgccttatccaaggaatgttcgtgcttcatag 16488519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 43 - 88
Target Start/End: Complemental strand, 8389456 - 8389411
Alignment:
Q  43 tgtccgacactgggacacacctaatccgaggagtgtctgtgcttca 88  Q
    |||||||||| |||||||||||||||||||||||||| ||||||||    
T  8389456 tgtccgacaccgggacacacctaatccgaggagtgtccgtgcttca 8389411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 41 - 90
Target Start/End: Original strand, 24807113 - 24807162
Alignment:
Q  41 catgtccgacactgggacacacctaatccgaggagtgtctgtgcttcata 90  Q
    |||||||||| ||||| |||||||||||||||||||||| ||||||||||    
T  24807113 catgtccgacgctggggcacacctaatccgaggagtgtcagtgcttcata 24807162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 9522931 - 9522999
Alignment:
Q  1 aattacaagtgtcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatcc 69  Q
    |||||||||||||||||| |||||||| |||||  |||||| |||||||||| | ||||| ||||||||    
T  9522931 aattacaagtgtcggtgttgtgtcggtgtcggatccgacacgtgtccgacaccgagacacgcctaatcc 9522999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 32 - 91
Target Start/End: Original strand, 16833368 - 16833427
Alignment:
Q  32 gacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    ||||||||||  |||||||||  ||||||||| |||||||||||||||||| ||||||||    
T  16833368 gacacgacacgcgtccgacaccaggacacaccgaatccgaggagtgtctgtacttcatag 16833427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 20 - 91
Target Start/End: Original strand, 24645529 - 24645600
Alignment:
Q  20 gtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    |||||||| || |||||||||| ||||||||||   |||||  ||||||||| |||||||||||||||||||    
T  24645529 gtgtcggtgtcagacacgacacgtgtccgacaccaagacacgtctaatccgaagagtgtctgtgcttcatag 24645600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 43 - 90
Target Start/End: Complemental strand, 27904010 - 27903963
Alignment:
Q  43 tgtccgacactgggacacacctaatccgaggagtgtctgtgcttcata 90  Q
    |||| |||| ||||||||||||||||||||||||||||||| ||||||    
T  27904010 tgtctgacagtgggacacacctaatccgaggagtgtctgtgattcata 27903963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 20 - 91
Target Start/End: Original strand, 28715343 - 28715414
Alignment:
Q  20 gtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    |||||||| ||||||||||||| ||| |||||| ||||||| |||||| |||| |||||  |||||||||||    
T  28715343 gtgtcggtgtcggacacgacacgtgttcgacaccgggacacgcctaattcgagaagtgtacgtgcttcatag 28715414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 48 - 91
Target Start/End: Original strand, 34446647 - 34446690
Alignment:
Q  48 gacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    |||||||||||||||||||||| ||||||||| |||||||||||    
T  34446647 gacactgggacacacctaatccaaggagtgtccgtgcttcatag 34446690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 17 - 91
Target Start/End: Original strand, 7248414 - 7248488
Alignment:
Q  17 gtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    ||||||||||| | |||||| |||  |||||||||| |||||||  | ||||||||||||||| |||||||||||    
T  7248414 gtcgtgtcggtgttggacacaacatgtgtccgacaccgggacacgtcaaatccgaggagtgtccgtgcttcatag 7248488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 42 - 91
Target Start/End: Complemental strand, 13360362 - 13360313
Alignment:
Q  42 atgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    ||||||||||||| ||||| |||||||||| ||||||| |||||||||||    
T  13360362 atgtccgacactgagacacgcctaatccgaagagtgtccgtgcttcatag 13360313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 41 - 93
Target Start/End: Complemental strand, 19122249 - 19122197
Alignment:
Q  41 catgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatagat 93  Q
    |||||| |||| | ||||||||||||||| | |||||||||||||||||||||    
T  19122249 catgtctgacattaggacacacctaatccaatgagtgtctgtgcttcatagat 19122197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 43 - 91
Target Start/End: Complemental strand, 34895016 - 34894968
Alignment:
Q  43 tgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    |||||||||| ||||||||||||||  |||||||||| |||||||||||    
T  34895016 tgtccgacacagggacacacctaatatgaggagtgtccgtgcttcatag 34894968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 10 - 89
Target Start/End: Complemental strand, 5000636 - 5000557
Alignment:
Q  10 tgtcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcat 89  Q
    |||| ||||| ||||||| || |||||||||||| ||||||||  ||||||  ||||||||| ||||||  |||||||||    
T  5000636 tgtcagtgtcatgtcggtgtcagacacgacacatatccgacaccaggacacgtctaatccgaagagtgttcgtgcttcat 5000557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 91
Target Start/End: Original strand, 9629431 - 9629513
Alignment:
Q  9 gtgtcggtgtcg-tgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    |||||||||||| ||||| | |||||||| |||  |||||||||||| |||||  |||||||||||||||||  ||||||||||    
T  9629431 gtgtcggtgtcggtgtcg-tgtcggacacaacatgtgtccgacactgagacacgtctaatccgaggagtgtccatgcttcatag 9629513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 91
Target Start/End: Complemental strand, 13364716 - 13364645
Alignment:
Q  20 gtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    |||||||| | |||||||| ||||||| |||||  ||||||  ||| ||||| |||||||||||||||||||    
T  13364716 gtgtcggtgttggacacgatacatgtctgacaccaggacacgtctattccgacgagtgtctgtgcttcatag 13364645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 20 - 94
Target Start/End: Complemental strand, 7265604 - 7265530
Alignment:
Q  20 gtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatagata 94  Q
    |||||||| |||||||| | ||||||||||||| || | |  |||||||||||||| ||| ||||||||| ||||    
T  7265604 gtgtcggtgtcggacacaatacatgtccgacaccggaatatgcctaatccgaggagcgtccgtgcttcattgata 7265530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 20 - 91
Target Start/End: Complemental strand, 12868691 - 12868616
Alignment:
Q  20 gtgtcggtatcggacacgaca----catgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    |||||||| ||||||||||||    |||||||||||| || |||| ||||||||||  |||||| |||||||||||    
T  12868691 gtgtcggtgtcggacacgacatgcacatgtccgacacgggaacacgcctaatccgataagtgtcggtgcttcatag 12868616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 47 - 85
Target Start/End: Complemental strand, 15489705 - 15489667
Alignment:
Q  47 cgacactgggacacacctaatccgaggagtgtctgtgct 85  Q
    ||||||||||| || ||||||||||||||||||||||||    
T  15489705 cgacactgggatacgcctaatccgaggagtgtctgtgct 15489667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 17302597 - 17302687
Alignment:
Q  1 aattacaagtgtcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    |||||||||||||  ||||||||| ||||  ||||| |||| |||||||||  || ||||||||||||| | || |||| ||| |||||||    
T  17302597 aattacaagtgtcattgtcgtgtcagtattagacacaacacgtgtccgacatcggaacacacctaatccaaagaatgtccgtgtttcatag 17302687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 17435239 - 17435329
Alignment:
Q  1 aattacaagtgtcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    ||||||||||||  ||||  ||||| | ||||||||||||| ||| ||||||||||||||  |||||| ||  |||||| || ||||||||    
T  17435239 aattacaagtgttagtgttttgtcgatgtcggacacgacacgtgttcgacactgggacacgtctaatctgaaaagtgtccgtacttcatag 17435329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 43 - 89
Target Start/End: Original strand, 28862188 - 28862234
Alignment:
Q  43 tgtccgacactgggacacacctaatccgaggagtgtctgtgcttcat 89  Q
    |||| |||||||||||||||||||| ||||| ||||| |||||||||    
T  28862188 tgtctgacactgggacacacctaattcgaggcgtgtccgtgcttcat 28862234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 43 - 88
Target Start/End: Complemental strand, 9025493 - 9025448
Alignment:
Q  43 tgtccgacactgggacacacctaatccgaggagtgtctgtgcttca 88  Q
    |||||||||| ||||||| ||||||||||| |||||| ||||||||    
T  9025493 tgtccgacaccgggacacgcctaatccgagaagtgtccgtgcttca 9025448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 48 - 89
Target Start/End: Complemental strand, 26178661 - 26178620
Alignment:
Q  48 gacactgggacacacctaatccgaggagtgtctgtgcttcat 89  Q
    ||||| ||||||| ||||||| ||||||||||||||||||||    
T  26178661 gacaccgggacacgcctaatcggaggagtgtctgtgcttcat 26178620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 54 - 91
Target Start/End: Complemental strand, 32839608 - 32839571
Alignment:
Q  54 gggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    ||||||| ||||||||||| ||||||||||||||||||    
T  32839608 gggacacgcctaatccgagaagtgtctgtgcttcatag 32839571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 20 - 92
Target Start/End: Original strand, 7378027 - 7378099
Alignment:
Q  20 gtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcataga 92  Q
    |||||||| ||||||||||||    |||||||| |||||||  |||||| ||| |||||| ||||||||||||    
T  7378027 gtgtcggtgtcggacacgacatgcatccgacaccgggacacggctaatctgagaagtgtccgtgcttcataga 7378099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 43 - 91
Target Start/End: Original strand, 7938171 - 7938219
Alignment:
Q  43 tgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    |||||||||| | ||||| ||| |||||||||||||| |||||||||||    
T  7938171 tgtccgacaccgagacacgcctgatccgaggagtgtccgtgcttcatag 7938219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 43 - 91
Target Start/End: Original strand, 9027238 - 9027286
Alignment:
Q  43 tgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    |||||||||| |||||||  ||||||| |||||||| ||||||||||||    
T  9027238 tgtccgacaccgggacacggctaatccaaggagtgtttgtgcttcatag 9027286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 20 - 72
Target Start/End: Complemental strand, 12627588 - 12627536
Alignment:
Q  20 gtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgag 72  Q
    |||||| | |||||||| ||||||||||||||| | ||||| |||||||||||    
T  12627588 gtgtcgatgtcggacaccacacatgtccgacaccgagacactcctaatccgag 12627536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 47 - 83
Target Start/End: Complemental strand, 16388207 - 16388171
Alignment:
Q  47 cgacactgggacacacctaatccgaggagtgtctgtg 83  Q
    |||||||||||||| ||||||||||||| ||||||||    
T  16388207 cgacactgggacacgcctaatccgaggactgtctgtg 16388171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 11 - 91
Target Start/End: Complemental strand, 34073356 - 34073278
Alignment:
Q  11 gtcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    ||||||||||||||||| ||  ||||||||  || ||||||| |||||||  ||||| ||||||||||| |||||||||||    
T  34073356 gtcggtgtcgtgtcggtgtct-acacgacatgtg-ccgacaccgggacacctctaattcgaggagtgtccgtgcttcatag 34073278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 75; Significance: 3e-34; HSPs: 62)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 41961669 - 41961579
Alignment:
Q  1 aattacaagtgtcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| |||||| |||||||||||    
T  41961669 aattacaagtgtcggtgtcgtgtcggtatcggacacgacacgtgtccgacactgggacacgcctaatccgagaagtgtccgtgcttcatag 41961579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 49651805 - 49651716
Alignment:
Q  1 aattacaagtgtcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    |||||||||||||||||||||||||| | |||||||||||||| |||||||| ||||||||||||||||||| |||||| |||||||||||    
T  49651805 aattacaagtgtcggtgtcgtgtcgg-accggacacgacacatatccgacaccgggacacacctaatccgagaagtgtccgtgcttcatag 49651716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 14216932 - 14217021
Alignment:
Q  1 aattacaagtgtcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcata 90  Q
    ||||||||||||| |||||||||  || ||||||||||||| ||| |||||||||||||||||||||||||| |||||| ||||||||||    
T  14216932 aattacaagtgtccgtgtcgtgttagtgtcggacacgacacgtgtacgacactgggacacacctaatccgagaagtgtccgtgcttcata 14217021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 14223061 - 14223150
Alignment:
Q  1 aattacaagtgtcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcata 90  Q
    ||||||||||||| |||||||||  || ||||||||||||| ||| |||||||||||||||||||||||||| |||||| ||||||||||    
T  14223061 aattacaagtgtccgtgtcgtgttagtgtcggacacgacacgtgtacgacactgggacacacctaatccgagaagtgtccgtgcttcata 14223150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 34185142 - 34185052
Alignment:
Q  1 aattacaagtgtcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    ||||||||||||||||||||||||  | ||||||| ||||  |||||||||| ||||||| |||||||||||||||||| |||||||||||    
T  34185142 aattacaagtgtcggtgtcgtgtccatgtcggacaagacatgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcatag 34185052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 4987310 - 4987222
Alignment:
Q  1 aattacaagtgtcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcat 89  Q
    |||||||||||| |||| ||||||||| | ||||||||||| |||||||||| ||||||| |||||||||||||||||| || ||||||    
T  4987310 aattacaagtgttggtgacgtgtcggtgttggacacgacacgtgtccgacaccgggacacgcctaatccgaggagtgtccgtacttcat 4987222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 3 - 91
Target Start/End: Original strand, 28812557 - 28812645
Alignment:
Q  3 ttacaagtgtcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    ||||||||||||||||||||| ||| || ||||||| ||||||||||||   |||||| ||||||||||||||||||||||| ||||||    
T  28812557 ttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgtccgacagcaggacacgcctaatccgaggagtgtctgtgcctcatag 28812645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 20 - 91
Target Start/End: Complemental strand, 40993346 - 40993275
Alignment:
Q  20 gtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    |||||||| |||||||||||||||||||||||| ||||||| ||||||||||||||||||  ||||||||||    
T  40993346 gtgtcggtgtcggacacgacacatgtccgacaccgggacacgcctaatccgaggagtgtccatgcttcatag 40993275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 9 - 91
Target Start/End: Complemental strand, 8039846 - 8039764
Alignment:
Q  9 gtgtcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    ||||||||||||||||||| ||||||| || ||||||||||||| ||||||| | |||||||| |||| ||||||||||||||    
T  8039846 gtgtcggtgtcgtgtcggtgtcggacatgagacatgtccgacaccgggacacgcttaatccgaagagtatctgtgcttcatag 8039764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 14209153 - 14209243
Alignment:
Q  1 aattacaagtgtcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    ||||||||||||| ||||||||||||| ||||||||||||| ||| |||||  |||| ||||||||||| || |||||| |||||||||||    
T  14209153 aattacaagtgtcagtgtcgtgtcggtgtcggacacgacacgtgtacgacatcgggatacacctaatccaagaagtgtccgtgcttcatag 14209243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 14832139 - 14832205
Alignment:
Q  1 aattacaagtgtcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaat 67  Q
    ||||||||||||| ||||||||||||||||||||||||||| |||||||||| ||||||| ||||||    
T  14832139 aattacaagtgtcagtgtcgtgtcggtatcggacacgacacgtgtccgacaccgggacacgcctaat 14832205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 20 - 93
Target Start/End: Original strand, 20503513 - 20503586
Alignment:
Q  20 gtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatagat 93  Q
    |||||||| | |||||||||||||||| ||||| ||||||| |||||||||||||||||| |||||||||||||    
T  20503513 gtgtcggtgttggacacgacacatgtctgacaccgggacacgcctaatccgaggagtgtccgtgcttcatagat 20503586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 16789052 - 16789143
Alignment:
Q  1 aattacaagtgtcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatagat 93  Q
    ||||| |||||| ||||||||||| || ||||||| ||||||||||| |||| ||||||||||||||  |||||||||| |||||||||||||    
T  16789052 aattataagtgttggtgtcgtgtcagtgtcggacatgacacatgtccaacac-gggacacacctaatttgaggagtgtccgtgcttcatagat 16789143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 20 - 91
Target Start/End: Original strand, 55401123 - 55401194
Alignment:
Q  20 gtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    |||||||| ||||||||||||| |||||||||| | ||||| |||||||||||||||||| |||||||||||    
T  55401123 gtgtcggtgtcggacacgacacgtgtccgacaccgagacacgcctaatccgaggagtgtccgtgcttcatag 55401194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 20 - 76
Target Start/End: Original strand, 10955000 - 10955056
Alignment:
Q  20 gtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagt 76  Q
    |||||||| ||||||||||||| |||||||||||||||||| |||||||||||||||    
T  10955000 gtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagt 10955056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 750637 - 750590
Alignment:
Q  1 aattacaagtgtcggtgtcgtgtcggtatcggacacgacacatgtccg 48  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  750637 aattacaagtgtcggtgtcgtgtcggtatcggacacgacacgtgtccg 750590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 27505286 - 27505370
Alignment:
Q  1 aattacaagtgtcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    |||||||||||||||||||||||| |      ||||||||| |||||||||| ||||||  |||||||||||||||||| |||||||||||    
T  27505286 aattacaagtgtcggtgtcgtgtctg------acacgacacgtgtccgacaccgggacatgcctaatccgaggagtgtccgtgcttcatag 27505370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 14 - 91
Target Start/End: Original strand, 21211335 - 21211413
Alignment:
Q  14 ggtgtcgtgtcggtatcggacac-gacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    |||||||||||||| |  ||||| ||| | |||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  21211335 ggtgtcgtgtcggtgttcgacaccgacgcgtgtccgacactgggacactcctaatccgaggagtgtttgtgcttcatag 21211413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 43 - 91
Target Start/End: Original strand, 25074866 - 25074914
Alignment:
Q  43 tgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||    
T  25074866 tgtccgacactgggacacacctaatccgaggagtgttcgtgcttcatag 25074914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 20 - 91
Target Start/End: Original strand, 52369834 - 52369906
Alignment:
Q  20 gtgtcggtatcggacac-gacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    ||||||||||||||||| ||| | ||||| |||| |||||||||||| ||||||||||||| |||||||||||    
T  52369834 gtgtcggtatcggacaccgacgcgtgtccaacaccgggacacacctattccgaggagtgtccgtgcttcatag 52369906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 21 - 92
Target Start/End: Original strand, 18426998 - 18427069
Alignment:
Q  21 tgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcataga 92  Q
    ||||||| ||||| ||||||| |||||| ||| ||||||||||||||| |||||||||| ||| ||||||||    
T  18426998 tgtcggtgtcggatacgacacgtgtccggcaccgggacacacctaatctgaggagtgtccgtgtttcataga 18427069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 15796313 - 15796223
Alignment:
Q  1 aattacaagtgtcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    |||||||| |||||||||||||| ||| |||||||| |||| ||||| |||| || |||| |||||||| | ||||||  |||||||||||    
T  15796313 aattacaattgtcggtgtcgtgtaggtgtcggacacaacacgtgtccaacaccggaacacgcctaatccaaagagtgttcgtgcttcatag 15796223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 31 - 89
Target Start/End: Original strand, 28918062 - 28918120
Alignment:
Q  31 ggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcat 89  Q
    ||||||||||| |||||||||||||||||| |||||||| |||||||||  ||||||||    
T  28918062 ggacacgacacgtgtccgacactgggacacgcctaatccaaggagtgtccctgcttcat 28918120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 20 - 90
Target Start/End: Complemental strand, 8789561 - 8789489
Alignment:
Q  20 gtgtcggtatcggacacgacaca--tgtccgacactgggacacacctaatccgaggagtgtctgtgcttcata 90  Q
    |||||||| ||||||||||||||  |||| ||||| | ||||| |||||||||||||||||| ||||||||||    
T  8789561 gtgtcggtgtcggacacgacacacatgtcggacaccgagacacgcctaatccgaggagtgtccgtgcttcata 8789489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 21 - 94
Target Start/End: Original strand, 8842378 - 8842451
Alignment:
Q  21 tgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatagata 94  Q
    ||||||| || ||||||||||||||  || | || ||||| |||||||||||||||||| ||||||||||||||    
T  8842378 tgtcggtgtcagacacgacacatgttagatattgagacacgcctaatccgaggagtgtccgtgcttcatagata 8842451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 14829729 - 14829822
Alignment:
Q  1 aattacaagtgtcggtgtcgtgtcggtatcggacacgacacat-gtccgacactgggacacacctaatccgaggagtgtctgtgcttcatagat 93  Q
    ||||||||||||||||||||||||||| | |||||||| |  | || |||||| ||||||| ||||||| ||||| |||| ||||||| |||||    
T  14829729 aattacaagtgtcggtgtcgtgtcggtgttggacacgagatgtggttcgacaccgggacacgcctaatctgaggaatgtccgtgcttcgtagat 14829822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 20 - 92
Target Start/End: Original strand, 11252024 - 11252096
Alignment:
Q  20 gtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcataga 92  Q
    |||||||| || ||||| |||| |||||| ||  || |||| |||||||||||||||||||||||||||||||    
T  11252024 gtgtcggtgtcagacacaacacgtgtccggcatcggaacacgcctaatccgaggagtgtctgtgcttcataga 11252096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 9 - 89
Target Start/End: Original strand, 13806284 - 13806363
Alignment:
Q  9 gtgtcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcat 89  Q
    ||||||||||||||||||| |  ||||| ||||||| ||||| | ||||||| |||||||||| ||||||| |||||||||    
T  13806284 gtgtcggtgtcgtgtcggtgttagacacaacacatgaccgaccccgggacacgcctaatccga-gagtgtccgtgcttcat 13806363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 29 - 84
Target Start/End: Original strand, 3631741 - 3631796
Alignment:
Q  29 tcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgc 84  Q
    ||||||||||||||||||||||||  |||||| |||| ||||||||||||| ||||    
T  3631741 tcggacacgacacatgtccgacaccaggacacgcctagtccgaggagtgtccgtgc 3631796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 20 - 91
Target Start/End: Original strand, 7171549 - 7171620
Alignment:
Q  20 gtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    |||| ||| ||||||||||||| |||||||||| | ||||| |||||||| |||||||| | ||||||||||    
T  7171549 gtgttggtgtcggacacgacacgtgtccgacaccgcgacacgcctaatccaaggagtgtatatgcttcatag 7171620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 20 - 91
Target Start/End: Original strand, 35222986 - 35223057
Alignment:
Q  20 gtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    |||||||| ||||||| ||||| |||| ||||| ||||||| | | |||||||||||||| |||||||||||    
T  35222986 gtgtcggtgtcggacatgacacgtgtctgacacggggacacgctttatccgaggagtgtccgtgcttcatag 35223057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 16 - 90
Target Start/End: Original strand, 37077413 - 37077488
Alignment:
Q  16 tgtcgtgtcggtatcggacacg-acacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcata 90  Q
    |||| ||||||| ||| ||||| || |||||||||||| |||||||||||||||| |||| |||| ||||||||||    
T  37077413 tgtcatgtcggtgtcgtacacggacgcatgtccgacacggggacacacctaatccaaggaatgtccgtgcttcata 37077488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 154 - 213
Target Start/End: Original strand, 50567201 - 50567260
Alignment:
Q  154 acataccaacaccaaagtcccaggaatcagcttcaccatcaacattcaagcctcctgtat 213  Q
    |||||||||||| ||||||||| ||||| |||||||| ||||||||||| ||| ||||||    
T  50567201 acataccaacacgaaagtcccatgaatcggcttcaccttcaacattcaaaccttctgtat 50567260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 7 - 93
Target Start/End: Original strand, 9800086 - 9800172
Alignment:
Q  7 aagtgtcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatagat 93  Q
    |||||||||||||||||||||||| || | || || |||| |||||  |||||| ||||||| |||| || || |||||||||||||    
T  9800086 aagtgtcggtgtcgtgtcggtatcagagatgatacgtgtcggacacctggacacgcctaatcggaggcgtttccgtgcttcatagat 9800172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 17005638 - 17005548
Alignment:
Q  1 aattacaagtgtcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    ||||| |||||||||||| |||| ||| || ||||  |||| |||| |||||  ||||||  |||||||||||||||| ||||||||||||    
T  17005638 aattataagtgtcggtgttgtgttggtgtcagacataacacgtgtctgacaccaggacacctctaatccgaggagtgtttgtgcttcatag 17005548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 43 - 93
Target Start/End: Original strand, 21367337 - 21367387
Alignment:
Q  43 tgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatagat 93  Q
    |||| |||||| |||||||||||||||||| ||||||||||||||| ||||    
T  21367337 tgtcggacacttggacacacctaatccgagaagtgtctgtgcttcacagat 21367387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 29 - 90
Target Start/End: Complemental strand, 10690254 - 10690193
Alignment:
Q  29 tcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcata 90  Q
    |||||||| |||| |||| ||||| | ||||||||||||||||||| ||| |||||||||||    
T  10690254 tcggacacaacacgtgtctgacacggcgacacacctaatccgaggaatgtatgtgcttcata 10690193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 55 - 92
Target Start/End: Original strand, 21861658 - 21861695
Alignment:
Q  55 ggacacacctaatccgaggagtgtctgtgcttcataga 92  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  21861658 ggacacacctaatccgaggagtgtccgtgcttcataga 21861695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 29 - 90
Target Start/End: Complemental strand, 32804546 - 32804485
Alignment:
Q  29 tcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcata 90  Q
    |||||||||||||||||||| |||||  | || ||||||| |||||||||| ||||||||||    
T  32804546 tcggacacgacacatgtccgccactgaaaaacgcctaatctgaggagtgtccgtgcttcata 32804485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 31 - 79
Target Start/End: Complemental strand, 6525683 - 6525635
Alignment:
Q  31 ggacacgacacatgtccgacactgggacacacctaatccgaggagtgtc 79  Q
    |||||| |||||||||||| || | ||||||||||||||||||||||||    
T  6525683 ggacacaacacatgtccgataccgagacacacctaatccgaggagtgtc 6525635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 29 - 89
Target Start/End: Original strand, 29508507 - 29508567
Alignment:
Q  29 tcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcat 89  Q
    |||||||||||||| ||||||||| |||||||  ||||||| || |||||| |||||||||    
T  29508507 tcggacacgacacacgtccgacaccgggacacgtctaatccaagaagtgtccgtgcttcat 29508567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 43 - 91
Target Start/End: Original strand, 40052383 - 40052431
Alignment:
Q  43 tgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    |||||||||| ||||||| |||||||||||||||||  |||||||||||    
T  40052383 tgtccgacaccgggacacgcctaatccgaggagtgttcgtgcttcatag 40052431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 54 - 93
Target Start/End: Complemental strand, 3730145 - 3730106
Alignment:
Q  54 gggacacacctaatccgaggagtgtctgtgcttcatagat 93  Q
    ||||||||||||||||||||||||||  ||||||||||||    
T  3730145 gggacacacctaatccgaggagtgtccatgcttcatagat 3730106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 55 - 90
Target Start/End: Original strand, 5339190 - 5339225
Alignment:
Q  55 ggacacacctaatccgaggagtgtctgtgcttcata 90  Q
    |||| |||||||||||||||||||||||||||||||    
T  5339190 ggactcacctaatccgaggagtgtctgtgcttcata 5339225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 91
Target Start/End: Complemental strand, 13845536 - 13845465
Alignment:
Q  20 gtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    |||||||| |||||||||| || |||| ||||| | ||||| ||| |||| ||||||||| |||||||||||    
T  13845536 gtgtcggtgtcggacacgagacgtgtctgacacggagacacgccttatccaaggagtgtccgtgcttcatag 13845465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 43 - 93
Target Start/End: Original strand, 11610580 - 11610630
Alignment:
Q  43 tgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatagat 93  Q
    |||||||||  ||||||| ||||||| |||||||||| |||||||||||||    
T  11610580 tgtccgacatcgggacacgcctaatctgaggagtgtccgtgcttcatagat 11610630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 37 - 91
Target Start/End: Original strand, 17276792 - 17276846
Alignment:
Q  37 gacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    ||||| |||||||||| | ||| ||||||||||||| |||||| |||||||||||    
T  17276792 gacacgtgtccgacaccgagacgcacctaatccgagaagtgtccgtgcttcatag 17276846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 40150560 - 40150522
Alignment:
Q  56 gacacacctaatccgaggagtgtctgtgcttcatagata 94  Q
    |||||||||||||||||||||||| ||||||||| ||||    
T  40150560 gacacacctaatccgaggagtgtccgtgcttcattgata 40150522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 55213003 - 55213092
Alignment:
Q  1 aattacaagtgtcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    |||||||||||||||||| |||||||| |||| ||| |||| |||||||||| | ||||| | |||||| || ||| || ||||| |||||    
T  55213003 aattacaagtgtcggtgt-gtgtcggtgtcgggcacaacacgtgtccgacaccgagacacgcataatccaagaagtatccgtgctacatag 55213092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 54 - 91
Target Start/End: Original strand, 8903517 - 8903554
Alignment:
Q  54 gggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    |||||||||||||||||||||||||  |||||||||||    
T  8903517 gggacacacctaatccgaggagtgttcgtgcttcatag 8903554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 43 - 88
Target Start/End: Original strand, 12100340 - 12100385
Alignment:
Q  43 tgtccgacactgggacacacctaatccgaggagtgtctgtgcttca 88  Q
    |||||||||| |||||||||||| ||||||||||| | ||||||||    
T  12100340 tgtccgacaccgggacacacctagtccgaggagtgcccgtgcttca 12100385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 45451601 - 45451642
Alignment:
Q  20 gtgtcggtatcggacacgacacatgtccgacactgggacaca 61  Q
    |||||||| |||||||||||||||||||||||| | ||||||    
T  45451601 gtgtcggtgtcggacacgacacatgtccgacaccgagacaca 45451642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 43 - 91
Target Start/End: Complemental strand, 4466588 - 4466540
Alignment:
Q  43 tgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    ||||||||||||||||||  || || ||||||||||| |||||||||||    
T  4466588 tgtccgacactgggacacggcttattcgaggagtgtccgtgcttcatag 4466540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 55 - 91
Target Start/End: Complemental strand, 4990948 - 4990912
Alignment:
Q  55 ggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    |||||| |||||||||||||||||| |||||||||||    
T  4990948 ggacacgcctaatccgaggagtgtccgtgcttcatag 4990912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 32 - 91
Target Start/End: Complemental strand, 5441027 - 5440967
Alignment:
Q  32 gacacgacacatgtccgacactgggacaca-cctaatccgaggagtgtctgtgcttcatag 91  Q
    |||||||||||||||| |||| | |||||  |||||| ||||||||||| |||||||||||    
T  5441027 gacacgacacatgtccaacaccgagacacggcctaattcgaggagtgtccgtgcttcatag 5440967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 43 - 91
Target Start/End: Original strand, 8039289 - 8039337
Alignment:
Q  43 tgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    |||||||| | |||||||||||||||| |||||||| | ||||||||||    
T  8039289 tgtccgactccgggacacacctaatccaaggagtgtttatgcttcatag 8039337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 43 - 91
Target Start/End: Original strand, 10455867 - 10455915
Alignment:
Q  43 tgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    ||||||||||||||||||   |||||| |||||||| ||||||||||||    
T  10455867 tgtccgacactgggacacgtttaatccaaggagtgtatgtgcttcatag 10455915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 43 - 91
Target Start/End: Complemental strand, 16789633 - 16789585
Alignment:
Q  43 tgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    |||||||||  |||||||||||||||| |||||||||  ||||||||||    
T  16789633 tgtccgacaacgggacacacctaatcctaggagtgtccatgcttcatag 16789585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 55 - 87
Target Start/End: Complemental strand, 21256984 - 21256952
Alignment:
Q  55 ggacacacctaatccgaggagtgtctgtgcttc 87  Q
    ||||||||||||||||||||||||| |||||||    
T  21256984 ggacacacctaatccgaggagtgtccgtgcttc 21256952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 23 - 91
Target Start/End: Original strand, 23657790 - 23657858
Alignment:
Q  23 tcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    ||||| ||||||| ||||  ||||||| || ||||||||||||||||||  |||||| || ||||||||    
T  23657790 tcggtgtcggacatgacatttgtccgataccgggacacacctaatccgaaaagtgtccgtacttcatag 23657858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 23 - 91
Target Start/End: Complemental strand, 26492213 - 26492145
Alignment:
Q  23 tcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    ||||| |||||||||||||||||| |||||   |||||  |||||||||||| |||| | |||||||||    
T  26492213 tcggtgtcggacacgacacatgtctgacaccaagacacgtctaatccgaggaatgtccgcgcttcatag 26492145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 55 - 91
Target Start/End: Complemental strand, 27513634 - 27513598
Alignment:
Q  55 ggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    ||||||||||||||| |||||| ||||||||||||||    
T  27513634 ggacacacctaatccaaggagtatctgtgcttcatag 27513598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 67; Significance: 2e-29; HSPs: 50)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 29510323 - 29510233
Alignment:
Q  1 aattacaagtgtcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    |||||||||||||||||| |||||||| ||||||||||| | |||||||||| |||||||||||||||||||||||||| |||||||||||    
T  29510323 aattacaagtgtcggtgtagtgtcggtgtcggacacgacgcgtgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcatag 29510233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 22652016 - 22652106
Alignment:
Q  1 aattacaagtgtcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    ||||||||||||||||||||||||||| ||||||||||||  |||||||||| |||||||  ||||||||||||||||| |||||||||||    
T  22652016 aattacaagtgtcggtgtcgtgtcggtgtcggacacgacatgtgtccgacaccgggacacgtctaatccgaggagtgtccgtgcttcatag 22652106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 15816148 - 15816058
Alignment:
Q  1 aattacaagtgtcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    ||||| ||||||||||||||||| ||| |||||||||||||   |||||||| ||||||| ||||||||||| |||||| |||||||||||    
T  15816148 aattataagtgtcggtgtcgtgttggtgtcggacacgacacgaatccgacaccgggacacgcctaatccgagaagtgtccgtgcttcatag 15816058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 8343356 - 8343446
Alignment:
Q  1 aattacaagtgtcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    ||||||||||||| |||||||    || || |||||||||| |||||||||| ||||||| |||||||||| |||||||||||||||||||    
T  8343356 aattacaagtgtcagtgtcgtacacgtgtccgacacgacacgtgtccgacaccgggacacgcctaatccgaagagtgtctgtgcttcatag 8343446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 21465452 - 21465542
Alignment:
Q  1 aattacaagtgtcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    |||||||||||| ||||||||||| || ||||||||||||| ||||| |||| |||| || ||||||  |||||||||| |||||||||||    
T  21465452 aattacaagtgttggtgtcgtgtcagtgtcggacacgacacgtgtccaacacagggatacgcctaatttgaggagtgtccgtgcttcatag 21465542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 4 - 90
Target Start/End: Complemental strand, 29447126 - 29447040
Alignment:
Q  4 tacaagtgtcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcata 90  Q
    |||||||||||||||| ||||||| ||||||||||||  |||| |||||  |||||| |||||||| ||||||||| ||||||||||    
T  29447126 tacaagtgtcggtgtcatgtcggtgtcggacacgacatgtgtctgacaccaggacacgcctaatcctaggagtgtccgtgcttcata 29447040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 15 - 91
Target Start/End: Complemental strand, 34451037 - 34450961
Alignment:
Q  15 gtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    ||||||||||||| ||||||||||||| |||| ||||| ||||||| ||| |||| ||||||||| |||||||||||    
T  34451037 gtgtcgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 34450961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 20 - 91
Target Start/End: Complemental strand, 36450765 - 36450694
Alignment:
Q  20 gtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    |||| ||| ||||||||||| | ||||||||||  |||||| ||||||||||||||||||||||||||||||    
T  36450765 gtgtaggtgtcggacacgacgcgtgtccgacaccaggacacgcctaatccgaggagtgtctgtgcttcatag 36450694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 4673444 - 4673354
Alignment:
Q  1 aattacaagtgtcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    |||||||||| || ||||| ||| | | ||||||||||| ||| |||||||| || |||| |||||||| |||||||||||||||||||||    
T  4673444 aattacaagtatcagtgtcttgttgatgtcggacacgacgcatatccgacaccggaacacgcctaatccaaggagtgtctgtgcttcatag 4673354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 29 - 91
Target Start/End: Complemental strand, 16641971 - 16641909
Alignment:
Q  29 tcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    ||||||||||||  ||||  |||| ||||||||||||||||||||||||||||||||||||||    
T  16641971 tcggacacgacatgtgtctaacaccgggacacacctaatccgaggagtgtctgtgcttcatag 16641909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 30 - 91
Target Start/End: Original strand, 18407777 - 18407838
Alignment:
Q  30 cggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    |||||||||||||||||||||||| |||||| ||||||  |||||||||| |||||||||||    
T  18407777 cggacacgacacatgtccgacactaggacacgcctaattggaggagtgtccgtgcttcatag 18407838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 2572075 - 2572015
Alignment:
Q  1 aattacaagtgtcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacaca 61  Q
    |||||||||||||||||||||||| || ||||||||||||| ||||||| || ||||||||    
T  2572075 aattacaagtgtcggtgtcgtgtctgtgtcggacacgacacgtgtccgataccgggacaca 2572015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 9 - 93
Target Start/End: Original strand, 29447492 - 29447576
Alignment:
Q  9 gtgtcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatagat 93  Q
    |||| |||||||||||||| || |||||||||  |||||||||| ||||||   |||||| |||||||||| |||||||||||||    
T  29447492 gtgttggtgtcgtgtcggtgtcagacacgacatgtgtccgacaccgggacaggtctaatcggaggagtgtccgtgcttcatagat 29447576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 43 - 91
Target Start/End: Complemental strand, 30068016 - 30067968
Alignment:
Q  43 tgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||||    
T  30068016 tgtccgacactgggacacacctaatccgatgagtgtccgtgcttcatag 30067968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 20 - 87
Target Start/End: Original strand, 5813640 - 5813707
Alignment:
Q  20 gtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttc 87  Q
    |||||||| ||||||||||||| |||||||||| ||||||| ||||||  |||||||||| |||||||    
T  5813640 gtgtcggtgtcggacacgacacgtgtccgacaccgggacacgcctaattggaggagtgtccgtgcttc 5813707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 9 - 91
Target Start/End: Original strand, 11803307 - 11803389
Alignment:
Q  9 gtgtcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    |||| ||||| |||| ||| | ||| |||||||||||||||||| || ||||  ||||||||||||||||| |||||||||||    
T  11803307 gtgttggtgttgtgttggtgttggatacgacacatgtccgacacaggtacacgtctaatccgaggagtgtccgtgcttcatag 11803389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 20 - 89
Target Start/End: Original strand, 3025599 - 3025668
Alignment:
Q  20 gtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcat 89  Q
    ||||| || ||||||||||||| |||| ||||||| |||||  ||||||||||||||||| |||||||||    
T  3025599 gtgtcagtgtcggacacgacacgtgtctgacactgtgacacggctaatccgaggagtgtccgtgcttcat 3025668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 43 - 91
Target Start/End: Original strand, 8343038 - 8343086
Alignment:
Q  43 tgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    |||||||||| ||||||| |||||||||| |||||||||||||||||||    
T  8343038 tgtccgacaccgggacacgcctaatccgaagagtgtctgtgcttcatag 8343086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 31 - 79
Target Start/End: Complemental strand, 22943349 - 22943301
Alignment:
Q  31 ggacacgacacatgtccgacactgggacacacctaatccgaggagtgtc 79  Q
    ||||||||||| |||||||||| ||||||| ||||||||||||||||||    
T  22943349 ggacacgacacgtgtccgacaccgggacacgcctaatccgaggagtgtc 22943301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 43 - 91
Target Start/End: Complemental strand, 38487205 - 38487157
Alignment:
Q  43 tgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    ||||||||||  |||||||| ||||||||||||||||||||||||||||    
T  38487205 tgtccgacacccggacacacataatccgaggagtgtctgtgcttcatag 38487157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 54 - 93
Target Start/End: Original strand, 25566912 - 25566951
Alignment:
Q  54 gggacacacctaatccgaggagtgtctgtgcttcatagat 93  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  25566912 gggacacgcctaatccgaggagtgtctgtgcttcatagat 25566951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 9 - 92
Target Start/End: Complemental strand, 26902186 - 26902103
Alignment:
Q  9 gtgtcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcataga 92  Q
    ||||||||||||| |  || ||||||||||||| |||| | ||| ||||||| ||| ||| |||||||||| ||||||||||||    
T  26902186 gtgtcggtgtcgtatgagtgtcggacacgacacgtgtctggcacggggacacgccttatctgaggagtgtccgtgcttcataga 26902103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 27067319 - 27067231
Alignment:
Q  1 aattacaagtgtcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    ||||||||||||| ||||||||||||| ||||||||||||  ||||  |||| ||   ||  ||||||||||||||||| |||||||||||    
T  27067319 aattacaagtgtcagtgtcgtgtcggtgtcggacacgacatgtgtcgaacaccgg--aacgtctaatccgaggagtgtccgtgcttcatag 27067231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 4 - 91
Target Start/End: Original strand, 28745541 - 28745628
Alignment:
Q  4 tacaagtgtcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    ||||| ||||| |||||||||||| ||||||||||||| |||||| ||| | ||||   ||||| | ||||||||| |||||||||||    
T  28745541 tacaaatgtcgatgtcgtgtcggtgtcggacacgacacctgtccgtcaccgagacaagtctaattcaaggagtgtccgtgcttcatag 28745628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 29 - 91
Target Start/End: Complemental strand, 6065648 - 6065586
Alignment:
Q  29 tcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    |||||||||||||||||||||||| || |||| | |||| | ||||||||| |||||||||||    
T  6065648 tcggacacgacacatgtccgacaccggaacacgcataattcaaggagtgtccgtgcttcatag 6065586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 47 - 93
Target Start/End: Complemental strand, 13436954 - 13436908
Alignment:
Q  47 cgacactgggacacacctaatccgaggagtgtctgtgcttcatagat 93  Q
    |||||| ||||||| |||||||| |||||||||||||||||||||||    
T  13436954 cgacaccgggacacgcctaatccaaggagtgtctgtgcttcatagat 13436908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 20 - 89
Target Start/End: Complemental strand, 926799 - 926730
Alignment:
Q  20 gtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcat 89  Q
    |||||||| |||||| |||||| |||||||||| ||||||  | | |||||||||||||| |||||||||    
T  926799 gtgtcggtgtcggacgcgacacgtgtccgacaccgggacatgctttatccgaggagtgtccgtgcttcat 926730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 9 - 90
Target Start/End: Complemental strand, 24205830 - 24205749
Alignment:
Q  9 gtgtcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcata 90  Q
    |||| ||||| |||||||| ||| |||| || |||||| ||||| || |||| |||||||||||||||||| ||| ||||||    
T  24205830 gtgttggtgttgtgtcggtgtcgaacacaacgcatgtctgacaccggaacacgcctaatccgaggagtgtccgtgtttcata 24205749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 43 - 92
Target Start/End: Original strand, 40064033 - 40064082
Alignment:
Q  43 tgtccgacactgggacacacctaatccgaggagtgtctgtgcttcataga 92  Q
    |||||||||| |||||||| ||||||||||||||||| ||||| ||||||    
T  40064033 tgtccgacaccgggacacatctaatccgaggagtgtccgtgctacataga 40064082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 34 - 86
Target Start/End: Complemental strand, 14639787 - 14639735
Alignment:
Q  34 cacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgctt 86  Q
    ||||||||||||||||||| ||||||  |||||||| |||||| |||||||||    
T  14639787 cacgacacatgtccgacaccgggacatgcctaatccaaggagtatctgtgctt 14639735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 20 - 91
Target Start/End: Original strand, 17751703 - 17751775
Alignment:
Q  20 gtgtcggtatcggacac-gacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    |||||||| |||||||| ||| |||  ||||||| ||||||| |||||||||||||||||| | |||||||||    
T  17751703 gtgtcggtgtcggacacagacgcatagccgacaccgggacacgcctaatccgaggagtgtccgcgcttcatag 17751775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 20 - 91
Target Start/End: Original strand, 17760690 - 17760762
Alignment:
Q  20 gtgtcggtatcggacac-gacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    |||||||| |||||||| ||| |||  ||||||| ||||||| |||||||||||||||||| | |||||||||    
T  17760690 gtgtcggtgtcggacacagacgcatagccgacaccgggacacgcctaatccgaggagtgtccgcgcttcatag 17760762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 15 - 91
Target Start/End: Original strand, 18964233 - 18964309
Alignment:
Q  15 gtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    ||||||||||||  | | ||||||||| ||||  |||| | ||||| ||| ||||||||||||||||||||||||||    
T  18964233 gtgtcgtgtcggcgttgaacacgacacctgtctaacacggagacacgccttatccgaggagtgtctgtgcttcatag 18964309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 43 - 91
Target Start/End: Complemental strand, 33389343 - 33389295
Alignment:
Q  43 tgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    ||||||||||||||| ||||||||||| || |||||| |||||||||||    
T  33389343 tgtccgacactgggatacacctaatccaagaagtgtcggtgcttcatag 33389295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 20 - 88
Target Start/End: Original strand, 40332239 - 40332307
Alignment:
Q  20 gtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttca 88  Q
    |||||||| | ||||||||||| ||||| |||| ||||| | |||||||||||||||||| ||| ||||    
T  40332239 gtgtcggtgtgggacacgacacgtgtcccacaccgggacgcgcctaatccgaggagtgtccgtgtttca 40332307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 91
Target Start/End: Complemental strand, 3951547 - 3951476
Alignment:
Q  20 gtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    |||||||| || |||||||||| |||| ||||| || |||| |||||||| |||||| || |||||||||||    
T  3951547 gtgtcggtgtcagacacgacacgtgtctgacacgggaacacgcctaatccaaggagtttccgtgcttcatag 3951476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 36 - 87
Target Start/End: Complemental strand, 12559095 - 12559044
Alignment:
Q  36 cgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttc 87  Q
    |||||| |||||||||  |||||||| ||||||| |||||||||||||||||    
T  12559095 cgacacgtgtccgacaacgggacacatctaatcccaggagtgtctgtgcttc 12559044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 91
Target Start/End: Complemental strand, 33405395 - 33405324
Alignment:
Q  20 gtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    |||||||| |||||||||||||||||| |||||  ||||||  ||||||| | ||||||| ||||| |||||    
T  33405395 gtgtcggtgtcggacacgacacatgtctgacacctggacacggctaatccaatgagtgtccgtgctccatag 33405324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 75
Target Start/End: Complemental strand, 44462206 - 44462151
Alignment:
Q  20 gtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggag 75  Q
    |||||||| || ||||||| ||||||||||||| |||||||  |||||||||||||    
T  44462206 gtgtcggtgtcagacacgatacatgtccgacaccgggacacgtctaatccgaggag 44462151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 75
Target Start/End: Complemental strand, 44469739 - 44469684
Alignment:
Q  20 gtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggag 75  Q
    |||||||| || ||||||| ||||||||||||| |||||||  |||||||||||||    
T  44469739 gtgtcggtgtcagacacgatacatgtccgacaccgggacacgtctaatccgaggag 44469684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 57 - 91
Target Start/End: Original strand, 11833935 - 11833969
Alignment:
Q  57 acacacctaatccgaggagtgtctgtgcttcatag 91  Q
    |||| ||||||||||||||||||||||||||||||    
T  11833935 acacgcctaatccgaggagtgtctgtgcttcatag 11833969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 29 - 91
Target Start/End: Original strand, 24858073 - 24858135
Alignment:
Q  29 tcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    ||||||||||||  ||||| || | ||||||| ||||||| ||||||||| ||||||||||||    
T  24858073 tcggacacgacatgtgtcccacgccgggacacgcctaatcagaggagtgtttgtgcttcatag 24858135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 48 - 86
Target Start/End: Complemental strand, 31109501 - 31109463
Alignment:
Q  48 gacactgggacacacctaatccgaggagtgtctgtgctt 86  Q
    ||||||||||||| |||||||||||||||||| ||||||    
T  31109501 gacactgggacacgcctaatccgaggagtgtccgtgctt 31109463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 20 - 90
Target Start/End: Complemental strand, 43737822 - 43737752
Alignment:
Q  20 gtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcata 90  Q
    |||||||| ||||||||||||  |||| ||||| |||| || ||| |||| ||||||||| ||||||||||    
T  43737822 gtgtcggtgtcggacacgacaggtgtctgacacggggatacgccttatccaaggagtgtccgtgcttcata 43737752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 92
Target Start/End: Original strand, 31557047 - 31557116
Alignment:
Q  23 tcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcataga 92  Q
    ||||| || |||||||||||||||||||||  |||||| |||||||| ||| |||||  ||| |||||||    
T  31557047 tcggtgtcagacacgacacatgtccgacaccaggacacgcctaatccaaggtgtgtccatgcctcataga 31557116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 41 - 93
Target Start/End: Original strand, 11791611 - 11791662
Alignment:
Q  41 catgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatagat 93  Q
    |||||| ||||  ||||||||||| ||||||||||||| ||||||||||||||    
T  11791611 catgtctgacatcgggacacacctgatccgaggagtgt-tgtgcttcatagat 11791662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 20 - 91
Target Start/End: Complemental strand, 14513180 - 14513108
Alignment:
Q  20 gtgtcggtatcggacac-gacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    |||||||| || ||||| ||| |||||||||||| || ||||||||||||| || | |||||||| |||||||    
T  14513180 gtgtcggtgtcagacaccgacgcatgtccgacaccggaacacacctaatccaagaattgtctgtgattcatag 14513108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 49 - 89
Target Start/End: Original strand, 16987990 - 16988030
Alignment:
Q  49 acactgggacacacctaatccgaggagtgtctgtgcttcat 89  Q
    |||| ||||||| |||||||||||||||||| |||||||||    
T  16987990 acaccgggacacccctaatccgaggagtgtccgtgcttcat 16988030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 55 - 91
Target Start/End: Complemental strand, 34127208 - 34127172
Alignment:
Q  55 ggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    ||||||||||||||| ||||||||| |||||||||||    
T  34127208 ggacacacctaatccaaggagtgtccgtgcttcatag 34127172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 43 - 91
Target Start/End: Original strand, 39820500 - 39820547
Alignment:
Q  43 tgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    |||||||||| ||||||| ||||||||||| |||||| |||||||||||    
T  39820500 tgtccgacac-gggacacgcctaatccgagaagtgtccgtgcttcatag 39820547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0450 (Bit Score: 65; Significance: 3e-28; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 8654 - 8562
Alignment:
Q  1 aattacaagtgtcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatagat 93  Q
    |||||||| ||||||||||||||||||||||||||||| || ||||||||||||| |||| |||||| ||||||||||| |||||||||||||    
T  8654 aattacaaatgtcggtgtcgtgtcggtatcggacacgatacgtgtccgacactggtacacgcctaattcgaggagtgtccgtgcttcatagat 8562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 65; Significance: 3e-28; HSPs: 56)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 24339682 - 24339774
Alignment:
Q  1 aattacaagtgtcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatagat 93  Q
    ||||||||||||||||||||||||||| ||||||||||||| | |||||||| ||||||| |||||||||||||||| | |||||||||||||    
T  24339682 aattacaagtgtcggtgtcgtgtcggtgtcggacacgacacgtatccgacaccgggacacgcctaatccgaggagtgcccgtgcttcatagat 24339774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 2334290 - 2334379
Alignment:
Q  1 aattacaagtgtcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    ||||||||||||||||||||||||| | ||||||||||||||||||||||||||  ||||  ||||||||||||||||| ||| |||||||    
T  2334290 aattacaagtgtcggtgtcgtgtcg-tgtcggacacgacacatgtccgacactgaaacacgtctaatccgaggagtgtccgtgtttcatag 2334379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 5409855 - 5409771
Alignment:
Q  1 aattacaagtgtcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    ||||||||||||||||||||||||||      ||||||||| |||||||||| ||||||| |||||||||||||||||| |||||||||||    
T  5409855 aattacaagtgtcggtgtcgtgtcgg------acacgacacgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcatag 5409771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 7438746 - 7438836
Alignment:
Q  1 aattacaagtgtcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    ||||||||||||||||||| ||||||| ||  ||||||||||||| ||||||| |||||| |||||| | ||||||||| |||||||||||    
T  7438746 aattacaagtgtcggtgtcatgtcggtgtcaaacacgacacatgtgcgacactaggacacgcctaattcaaggagtgtccgtgcttcatag 7438836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 20 - 92
Target Start/End: Original strand, 21880200 - 21880272
Alignment:
Q  20 gtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcataga 92  Q
    |||||||| ||||||||||||||||||||||||  |||||| ||||||||||| |||||| ||||||||||||    
T  21880200 gtgtcggtgtcggacacgacacatgtccgacaccaggacacgcctaatccgagaagtgtccgtgcttcataga 21880272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 26033480 - 26033392
Alignment:
Q  1 aattacaagtgtcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcat 89  Q
    |||||||||||||||| |||||||||| || |||| ||||| ||||||| || | |||||||||||||||||||||||| ||| |||||    
T  26033480 aattacaagtgtcggtctcgtgtcggtgtcagacatgacacgtgtccgataccgcgacacacctaatccgaggagtgtccgtgtttcat 26033392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 25822695 - 25822785
Alignment:
Q  1 aattacaagtgtcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||| ||||  ||||||  |||||||  ||||||||| ||| |||||||    
T  25822695 aattacaagtgtcggtgtcgtatcggtatcggacacgacacgtgtctgacatcgggacatgcctaatctaaggagtgtccgtgtttcatag 25822785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 20 - 90
Target Start/End: Complemental strand, 32287474 - 32287404
Alignment:
Q  20 gtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcata 90  Q
    |||||||| ||||||| ||||  |||||||||| |||||||||||||||||||||||||| ||||||||||    
T  32287474 gtgtcggtgtcggacatgacaagtgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcata 32287404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 9 - 78
Target Start/End: Original strand, 32308168 - 32308237
Alignment:
Q  9 gtgtcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgt 78  Q
    ||||| ||||||||||||| | |||||||||||||||||||||| | |||||| ||||||||||||||||    
T  32308168 gtgtcagtgtcgtgtcggtgttggacacgacacatgtccgacaccgagacacagctaatccgaggagtgt 32308237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 20 - 91
Target Start/End: Original strand, 598256 - 598327
Alignment:
Q  20 gtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    |||||||| || |||||||||| |||||||||| ||||||| ||||||||||| |||||| |||||||||||    
T  598256 gtgtcggtgtcagacacgacacgtgtccgacaccgggacacgcctaatccgagaagtgtccgtgcttcatag 598327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 9778540 - 9778624
Alignment:
Q  1 aattacaagtgtcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    ||||||||||||||||||||||||||      |||| |||| |||||||||| ||||||| |||||||| ||||||||| |||||||||||    
T  9778540 aattacaagtgtcggtgtcgtgtcgg------acacaacacgtgtccgacaccgggacacgcctaatccaaggagtgtccgtgcttcatag 9778624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 20 - 91
Target Start/End: Original strand, 21864856 - 21864927
Alignment:
Q  20 gtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    |||||| | ||||||||||||| |||||||||| |||||||  ||||| |||||||||||||||||||||||    
T  21864856 gtgtcgctgtcggacacgacacgtgtccgacaccgggacacgtctaattcgaggagtgtctgtgcttcatag 21864927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 20 - 90
Target Start/End: Original strand, 20549839 - 20549909
Alignment:
Q  20 gtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcata 90  Q
    |||||||| |||||||| |||||||||||||| || ||||| |||||||||||||||| | ||||||||||    
T  20549839 gtgtcggtgtcggacacaacacatgtccgacaatgagacacgcctaatccgaggagtgcccgtgcttcata 20549909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 7058466 - 7058543
Alignment:
Q  1 aattacaagtgtcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtct 80  Q
    |||||||||||| ||||||||||||  ||||||||| |||||||||||||| ||  |||| |||||||| ||||||||||    
T  7058466 aattacaagtgttggtgtcgtgtcg--atcggacacaacacatgtccgacattgacacacgcctaatccaaggagtgtct 7058543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 20 - 91
Target Start/End: Complemental strand, 7133284 - 7133212
Alignment:
Q  20 gtgtcggtatcggacac-gacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    |||||||| |||||||| ||| | |||||||||||||||||||||||||| |||||| ||| |||||||||||    
T  7133284 gtgtcggtgtcggacaccgacgcgtgtccgacactgggacacacctaatctgaggagcgtccgtgcttcatag 7133212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 4 - 91
Target Start/End: Complemental strand, 43027485 - 43027404
Alignment:
Q  4 tacaagtgtcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    ||||||||||||||||||||| |      ||||||||| |||||||||| ||||||| |||||||||| ||||||| |||||||||||    
T  43027485 tacaagtgtcggtgtcgtgtcag------acacgacacgtgtccgacaccgggacacgcctaatccgatgagtgtccgtgcttcatag 43027404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 20 - 91
Target Start/End: Original strand, 15680857 - 15680928
Alignment:
Q  20 gtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    |||||||| ||||||||||||| |||||||||| | |||||  ||||| ||||||||||| |||||||||||    
T  15680857 gtgtcggtgtcggacacgacacgtgtccgacaccgagacacgtctaattcgaggagtgtccgtgcttcatag 15680928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 20 - 91
Target Start/End: Complemental strand, 18213044 - 18212973
Alignment:
Q  20 gtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    |||||||| ||||||||||| | | || ||||| ||||||| ||| ||||||||||||||||||||||||||    
T  18213044 gtgtcggtgtcggacacgacccctttctgacacggggacacgccttatccgaggagtgtctgtgcttcatag 18212973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 33 - 96
Target Start/End: Complemental strand, 20545242 - 20545179
Alignment:
Q  33 acacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatagataac 96  Q
    |||||||||||||||||||| |||||||   |||| |||||||||||||||||||||| |||||    
T  20545242 acacgacacatgtccgacacggggacacgtttaattcgaggagtgtctgtgcttcatatataac 20545179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 29 - 91
Target Start/End: Original strand, 17852057 - 17852119
Alignment:
Q  29 tcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    ||||||| ||||| |||||||||| | |||||||||||| ||||||||||| |||||||||||    
T  17852057 tcggacatgacacgtgtccgacaccgagacacacctaattcgaggagtgtccgtgcttcatag 17852119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 32094039 - 32093954
Alignment:
Q  1 aattacaagtgtcggtgtcgtgtcggtatcggacacgacacatgtccgacactggg-acacacctaatccgaggagtgtctgtgcttcatag 91  Q
    |||||||| |||||||||||||||||      ||||||||| |||||||||| ||| |||| |||||||||||||||||  |||||||||||    
T  32094039 aattacaaatgtcggtgtcgtgtcgg------acacgacacgtgtccgacaccggggacacgcctaatccgaggagtgttcgtgcttcatag 32093954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 43 - 91
Target Start/End: Complemental strand, 40131987 - 40131939
Alignment:
Q  43 tgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    |||||||||| |||||||  |||||||||||||||||||||||||||||    
T  40131987 tgtccgacacagggacacgtctaatccgaggagtgtctgtgcttcatag 40131939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 20 - 83
Target Start/End: Original strand, 26733352 - 26733415
Alignment:
Q  20 gtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtg 83  Q
    |||||||| ||||||||||| ||||||||| || || |||| |||||||||||| |||||||||    
T  26733352 gtgtcggtgtcggacacgacgcatgtccgatacgggaacacgcctaatccgaggggtgtctgtg 26733415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 21930668 - 21930758
Alignment:
Q  1 aattacaagtgtcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    |||||||||||||| ||||||||| || | |||||| | || |||||||| | || ||||||||||||||| ||| |||  ||||||||||    
T  21930668 aattacaagtgtcgatgtcgtgtcagtgttggacacaagacgtgtccgacgccggaacacacctaatccgaagagagtccatgcttcatag 21930758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 33 - 91
Target Start/End: Complemental strand, 29763187 - 29763129
Alignment:
Q  33 acacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    ||||||||| |||||||||   |||||| |||||||||||||||||| |||||||||||    
T  29763187 acacgacacgtgtccgacatcaggacacgcctaatccgaggagtgtccgtgcttcatag 29763129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 37 - 87
Target Start/End: Complemental strand, 40287356 - 40287306
Alignment:
Q  37 gacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttc 87  Q
    |||||||||||||||| ||||||  |||||||||||||||||| |||||||    
T  40287356 gacacatgtccgacaccgggacatgcctaatccgaggagtgtccgtgcttc 40287306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 29 - 83
Target Start/End: Complemental strand, 48246804 - 48246750
Alignment:
Q  29 tcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtg 83  Q
    ||||||||||||||||||||||| ||||||||||| ||| |||||| ||| ||||    
T  48246804 tcggacacgacacatgtccgacattgggacacaccaaattcgaggaatgtttgtg 48246750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 21 - 90
Target Start/End: Complemental strand, 3554516 - 3554447
Alignment:
Q  21 tgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcata 90  Q
    ||||||| ||||||||||||||| ||  |||||| |||||  ||||| ||| ||||||||||||||||||    
T  3554516 tgtcggtgtcggacacgacacatatctaacactgagacacgtctaattcgaagagtgtctgtgcttcata 3554447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 9 - 78
Target Start/End: Original strand, 11072344 - 11072413
Alignment:
Q  9 gtgtcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgt 78  Q
    |||||||||||||||||||||| ||||||| ||||| || |||| || | |||||||||| || ||||||    
T  11072344 gtgtcggtgtcgtgtcggtatctgacacgatacatgaccaacaccggaatacacctaatctgaagagtgt 11072413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 53 - 90
Target Start/End: Original strand, 49107886 - 49107923
Alignment:
Q  53 tgggacacacctaatccgaggagtgtctgtgcttcata 90  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  49107886 tgggacatacctaatccgaggagtgtctgtgcttcata 49107923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 43 - 91
Target Start/End: Original strand, 6490787 - 6490835
Alignment:
Q  43 tgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    |||||||||| ||||||| | |||||||||||||||| |||||||||||    
T  6490787 tgtccgacaccgggacacgcttaatccgaggagtgtccgtgcttcatag 6490835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 9408353 - 9408265
Alignment:
Q  1 aattacaagtgtcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcat 89  Q
    ||||||||||||||||||||| ||||| || ||||||| | || ||||||||    |||| |||||||||| || |||| |||||||||    
T  9408353 aattacaagtgtcggtgtcgtatcggtgtcagacacgatatatatccgacaccaaaacacgcctaatccgaagaatgtccgtgcttcat 9408265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 11272605 - 11272569
Alignment:
Q  1 aattacaagtgtcggtgtcgtgtcggtatcggacacg 37  Q
    ||||||||||||||||||||||||||| |||||||||    
T  11272605 aattacaagtgtcggtgtcgtgtcggtgtcggacacg 11272569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 15902870 - 15902910
Alignment:
Q  9 gtgtcggtgtcgtgtcggtatcggacacgacacatgtccga 49  Q
    |||||||||| ||||||||||||||||||||||||| ||||    
T  15902870 gtgtcggtgttgtgtcggtatcggacacgacacatgcccga 15902910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 43 - 91
Target Start/End: Original strand, 24105749 - 24105797
Alignment:
Q  43 tgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    |||||||||| ||||||| ||||| ||||||||||| ||||||||||||    
T  24105749 tgtccgacaccgggacacgcctaacccgaggagtgtttgtgcttcatag 24105797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 43 - 91
Target Start/End: Original strand, 35749958 - 35750006
Alignment:
Q  43 tgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    ||||||| || |||||||||||| || ||||||||||||||||||||||    
T  35749958 tgtccgaaaccgggacacacctagtcggaggagtgtctgtgcttcatag 35750006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 40 - 91
Target Start/End: Original strand, 1401091 - 1401142
Alignment:
Q  40 acatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    ||||||||||||  ||||||||||||||| ||||||||||  ||||||||||    
T  1401091 acatgtccgacatcgggacacacctaatctgaggagtgtccatgcttcatag 1401142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 45 - 92
Target Start/End: Complemental strand, 3652296 - 3652249
Alignment:
Q  45 tccgacactgggacacacctaatccgaggagtgtctgtgcttcataga 92  Q
    ||||||||| ||||||||||||||||||| || | |||||||||||||    
T  3652296 tccgacacttggacacacctaatccgaggggtatatgtgcttcataga 3652249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 6028665 - 6028732
Alignment:
Q  1 aattacaagtgtcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatc 68  Q
    |||||||| ||||||||||||||| || ||| |||||||||  || |||||||| ||||| |||||||    
T  6028665 aattacaaatgtcggtgtcgtgtcagtgtcgaacacgacacgagttcgacactgagacacgcctaatc 6028732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 9933321 - 9933364
Alignment:
Q  9 gtgtcggtgtcgtgtcggtatcggacacgacacatgtccgacac 52  Q
    ||||| ||||||||||||| |||||||||||||||||| |||||    
T  9933321 gtgtcagtgtcgtgtcggtgtcggacacgacacatgtctgacac 9933364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 32 - 79
Target Start/End: Complemental strand, 27093412 - 27093365
Alignment:
Q  32 gacacgacacatgtccgacactgggacacacctaatccgaggagtgtc 79  Q
    |||||||||  ||||||||||| ||||||||||||||||| |||||||    
T  27093412 gacacgacatgtgtccgacactaggacacacctaatccgatgagtgtc 27093365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 32 - 79
Target Start/End: Original strand, 27184889 - 27184936
Alignment:
Q  32 gacacgacacatgtccgacactgggacacacctaatccgaggagtgtc 79  Q
    |||||||||  ||||||||||| ||||||||||||||||| |||||||    
T  27184889 gacacgacatgtgtccgacactaggacacacctaatccgatgagtgtc 27184936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 91
Target Start/End: Original strand, 33994260 - 33994331
Alignment:
Q  20 gtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    |||||||| || |||||||||||||||| |||| | ||||| |||||||| ||||||||  ||| |||||||    
T  33994260 gtgtcggtgtcagacacgacacatgtccaacaccgagacacgcctaatccaaggagtgttcgtgtttcatag 33994331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 92
Target Start/End: Complemental strand, 38804567 - 38804488
Alignment:
Q  14 ggtgtcgtgtcggtatcggacac-gacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcataga 92  Q
    |||||||||| ||| |||||||| |||   |||||||| | ||||||  ||||||||||||||||| |||||||||||||    
T  38804567 ggtgtcgtgttggtgtcggacaccgacgtgtgtccgacgccgggacatgcctaatccgaggagtgtatgtgcttcataga 38804488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 29 - 91
Target Start/End: Original strand, 1433516 - 1433578
Alignment:
Q  29 tcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    ||||||| ||||  ||||||||||  ||||||  ||||||||||||||||| |||||||||||    
T  1433516 tcggacaagacatgtgtccgacaccaggacacgtctaatccgaggagtgtccgtgcttcatag 1433578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 9 - 83
Target Start/End: Complemental strand, 6630923 - 6630849
Alignment:
Q  9 gtgtcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtg 83  Q
    |||||| |||||||| ||| |||||||| |||| || |||||||   ||||||||||||| ||||||||| ||||    
T  6630923 gtgtcgatgtcgtgttggtgtcggacacaacacgtgcccgacaccaagacacacctaatctgaggagtgtgtgtg 6630849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 20 - 90
Target Start/End: Complemental strand, 7197308 - 7197238
Alignment:
Q  20 gtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcata 90  Q
    |||||||| |||||||| ||||||||||||||| |||| || | || |||||| | |||| ||||||||||    
T  7197308 gtgtcggtgtcggacacaacacatgtccgacaccgggatactcttattccgagaaatgtccgtgcttcata 7197238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 24 - 69
Target Start/End: Original strand, 8234198 - 8234243
Alignment:
Q  24 cggtatcggacacgacacatgtccgacactgggacacacctaatcc 69  Q
    |||| |||||||||||||||||||||||| | ||||| ||||||||    
T  8234198 cggtgtcggacacgacacatgtccgacaccgagacacgcctaatcc 8234243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 62 - 91
Target Start/End: Complemental strand, 23128632 - 23128603
Alignment:
Q  62 cctaatccgaggagtgtctgtgcttcatag 91  Q
    ||||||||||||||||||||||||||||||    
T  23128632 cctaatccgaggagtgtctgtgcttcatag 23128603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 54 - 91
Target Start/End: Complemental strand, 38134372 - 38134335
Alignment:
Q  54 gggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    ||||||| ||||||||||||||||| ||||||||||||    
T  38134372 gggacacgcctaatccgaggagtgtatgtgcttcatag 38134335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 51 - 91
Target Start/End: Original strand, 3991392 - 3991432
Alignment:
Q  51 actgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    |||||||||| |||||||||||||||||| | |||||||||    
T  3991392 actgggacacgcctaatccgaggagtgtccgggcttcatag 3991432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 42 - 94
Target Start/End: Original strand, 5307326 - 5307378
Alignment:
Q  42 atgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatagata 94  Q
    |||| ||||||| |||||| |||||||| ||||||||  ||||||||||||||    
T  5307326 atgtgcgacactaggacacgcctaatccaaggagtgtacgtgcttcatagata 5307378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 54 - 90
Target Start/End: Complemental strand, 11272567 - 11272531
Alignment:
Q  54 gggacacacctaatccgaggagtgtctgtgcttcata 90  Q
    ||||||| ||||||||||||||| |||||||||||||    
T  11272567 gggacacgcctaatccgaggagtatctgtgcttcata 11272531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 43 - 91
Target Start/End: Original strand, 14729774 - 14729822
Alignment:
Q  43 tgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    |||||||||| ||||||| | |||||||||||||||| || ||||||||    
T  14729774 tgtccgacaccgggacacgcttaatccgaggagtgtccgtacttcatag 14729822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 33 - 89
Target Start/End: Original strand, 22868108 - 22868164
Alignment:
Q  33 acacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcat 89  Q
    |||| |||| |||| ||||| ||||||||| ||||||||||||||||  ||||||||    
T  22868108 acacaacacgtgtcagacaccgggacacacataatccgaggagtgtccatgcttcat 22868164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 55 - 91
Target Start/End: Original strand, 35862034 - 35862070
Alignment:
Q  55 ggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    |||||| |||||||||||||||||| |||||||||||    
T  35862034 ggacacgcctaatccgaggagtgtccgtgcttcatag 35862070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 63; Significance: 4e-27; HSPs: 56)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 30183589 - 30183675
Alignment:
Q  1 aattacaagtgtcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttc 87  Q
    ||||||||||||||||||||||| |||||| |||||||||| |||||||||||||||||| |||||| |||| ||||||||||||||    
T  30183589 aattacaagtgtcggtgtcgtgttggtatcagacacgacacgtgtccgacactgggacacgcctaattcgagaagtgtctgtgcttc 30183675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 7677745 - 7677835
Alignment:
Q  1 aattacaagtgtcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    ||||| ||||||||||||||||||||| || |||||| |||||||||||||| ||||||| |||||||||||||| ||| |||||||||||    
T  7677745 aattagaagtgtcggtgtcgtgtcggtgtctgacacgtcacatgtccgacaccgggacacgcctaatccgaggagagtcggtgcttcatag 7677835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 39698581 - 39698671
Alignment:
Q  1 aattacaagtgtcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    ||||||||||||| ||||||||||||| ||||||||||||  | |||||||| | ||||| |||||||||||||||||| |||||||||||    
T  39698581 aattacaagtgtcagtgtcgtgtcggtgtcggacacgacatgtatccgacaccgagacacgcctaatccgaggagtgtccgtgcttcatag 39698671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 21542070 - 21542159
Alignment:
Q  1 aattacaagtgtcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcata 90  Q
    ||||||||||||||||||||||||||| ||||||||||||| |||||||||| ||||||| || ||||| |||| |||| |||| |||||    
T  21542070 aattacaagtgtcggtgtcgtgtcggtgtcggacacgacacgtgtccgacaccgggacacgccgaatccaaggaatgtccgtgcatcata 21542159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 21522790 - 21522880
Alignment:
Q  1 aattacaagtgtcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    |||||||| |||||||||||||||||| ||||||||||||| |||||| ||| ||||||| |||||||| | ||||||| |||| ||||||    
T  21522790 aattacaattgtcggtgtcgtgtcggtgtcggacacgacacgtgtccggcaccgggacacgcctaatccaaagagtgtccgtgcatcatag 21522880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 21533356 - 21533446
Alignment:
Q  1 aattacaagtgtcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    |||||||| |||||||||||||||||| ||||||||||||| |||||| ||| ||||||| |||||||| | ||||||| |||| ||||||    
T  21533356 aattacaattgtcggtgtcgtgtcggtgtcggacacgacacgtgtccggcaccgggacacgcctaatccaaagagtgtccgtgcatcatag 21533446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 19579741 - 19579818
Alignment:
Q  1 aattacaagtgtcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgt 78  Q
    |||||||||||||||||||||||| || |||||||||||| |||||  |||| ||||||| |||||||||||||||||    
T  19579741 aattacaagtgtcggtgtcgtgtcagtgtcggacacgacatatgtctaacaccgggacacgcctaatccgaggagtgt 19579818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 39 - 91
Target Start/End: Complemental strand, 38464365 - 38464313
Alignment:
Q  39 cacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  38464365 cacatgtccgacaccgggacacacctaatccgaggagtgtctgtgcttcatag 38464313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 20 - 91
Target Start/End: Complemental strand, 21576756 - 21576685
Alignment:
Q  20 gtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    |||||| | ||||||||||||| |||| ||||||||||||| |||||||||||||||||| |||||||||||    
T  21576756 gtgtcgatgtcggacacgacacgtgtctgacactgggacacgcctaatccgaggagtgtccgtgcttcatag 21576685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 31084363 - 31084448
Alignment:
Q  1 aattacaagtgtcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcataga 92  Q
    |||||||||||||| |||||||||||      ||||||||| |||||||||||||||||  |||||||||||||||||| ||| ||||||||    
T  31084363 aattacaagtgtcgatgtcgtgtcgg------acacgacacgtgtccgacactgggacatgcctaatccgaggagtgtccgtggttcataga 31084448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 20 - 88
Target Start/End: Complemental strand, 39268609 - 39268541
Alignment:
Q  20 gtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttca 88  Q
    |||||||| | ||||||||||  |||||||||||||||||| |||||||||||||||||| ||||||||    
T  39268609 gtgtcggtgttggacacgacatgtgtccgacactgggacacgcctaatccgaggagtgtccgtgcttca 39268541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 20 - 79
Target Start/End: Original strand, 15382533 - 15382592
Alignment:
Q  20 gtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtc 79  Q
    |||||||| | |||||||||||||||||||||| ||||||| ||||||||||||||||||    
T  15382533 gtgtcggtgttggacacgacacatgtccgacaccgggacacgcctaatccgaggagtgtc 15382592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 21 - 91
Target Start/End: Original strand, 17123097 - 17123166
Alignment:
Q  21 tgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    ||||||| | |||||||| ||||||||||||| ||||||| |||||||||||||||||| |||||||||||    
T  17123097 tgtcggtgttggacacgaaacatgtccgacac-gggacacgcctaatccgaggagtgtccgtgcttcatag 17123166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 7 - 97
Target Start/End: Complemental strand, 36642775 - 36642686
Alignment:
Q  7 aagtgtcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatagataacc 97  Q
    ||||||||||||| ||| ||| ||||||||||||| |||||||||| ||||||| ||||||  |||||||||| ||||||| ||| |||||    
T  36642775 aagtgtcggtgtcatgttggtgtcggacacgacacgtgtccgacac-gggacacgcctaattggaggagtgtcggtgcttcgtaggtaacc 36642686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 9 - 90
Target Start/End: Original strand, 6401546 - 6401627
Alignment:
Q  9 gtgtcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcata 90  Q
    |||||||||||||||| || ||||||||||||| |||| ||||| |||| || ||| |||| ||||||||| ||||||||||    
T  6401546 gtgtcggtgtcgtgtcagtgtcggacacgacacgtgtctgacacggggatacgccttatccaaggagtgtccgtgcttcata 6401627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 20 - 89
Target Start/End: Complemental strand, 21191067 - 21190998
Alignment:
Q  20 gtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcat 89  Q
    |||||||| |||||||| |||| |||||||| | ||||||| |||||||||||||||||| |||||||||    
T  21191067 gtgtcggtgtcggacacaacacgtgtccgactccgggacacgcctaatccgaggagtgtccgtgcttcat 21190998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 10 - 91
Target Start/End: Original strand, 30098375 - 30098456
Alignment:
Q  10 tgtcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    ||||||| ||| ||| || ||||||||||||| |||| |||||  |||||||||||||||||||| |||| |||||||||||    
T  30098375 tgtcggtatcgagtcagtgtcggacacgacacgtgtcagacaccaggacacacctaatccgaggaatgtccgtgcttcatag 30098456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 20 - 89
Target Start/End: Complemental strand, 30502399 - 30502330
Alignment:
Q  20 gtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcat 89  Q
    |||||||| |||||||||||||||||||||||||||||||  |||||||| |||| |||  |||||||||    
T  30502399 gtgtcggtgtcggacacgacacatgtccgacactgggacatgcctaatccaaggattgttcgtgcttcat 30502330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 20 - 89
Target Start/End: Complemental strand, 30542742 - 30542673
Alignment:
Q  20 gtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcat 89  Q
    |||||||| |||||||||||||||||||||||||||||||  |||||||| |||| |||  |||||||||    
T  30542742 gtgtcggtgtcggacacgacacatgtccgacactgggacatgcctaatccaaggattgttcgtgcttcat 30542673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 56 - 95
Target Start/End: Original strand, 14674333 - 14674372
Alignment:
Q  56 gacacacctaatccgaggagtgtctgtgcttcatagataa 95  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  14674333 gacacacctaatccgaggagtgtctgtgcttcatagataa 14674372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 26 - 89
Target Start/End: Complemental strand, 23015989 - 23015926
Alignment:
Q  26 gtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcat 89  Q
    |||||||||||||||  ||||||||| |||||||| |||||||||||||||||| | |||||||    
T  23015989 gtatcggacacgacatgtgtccgacattgggacacgcctaatccgaggagtgtccgagcttcat 23015926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 20 - 91
Target Start/End: Complemental strand, 32630746 - 32630675
Alignment:
Q  20 gtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    ||||| || ||||| ||||||| ||||||||| || |||||||||||| |||||||||||| ||||||||||    
T  32630746 gtgtcagtgtcggatacgacacgtgtccgacattgagacacacctaattcgaggagtgtctatgcttcatag 32630675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 37328863 - 37328775
Alignment:
Q  1 aattacaagtgtcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    ||||||| ||||||||||||||||||| ||||||||||  |  |||||| || |||| || | |||||||||||||||| |||||||||||    
T  37328863 aattacatgtgtcggtgtcgtgtcggtgtcggacacgatgc--gtccgataccgggatacgcttaatccgaggagtgtccgtgcttcatag 37328775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 20 - 91
Target Start/End: Original strand, 43564929 - 43565000
Alignment:
Q  20 gtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    |||||||| ||||||||||||  |||||||| | ||||||| ||||||||||| |||||| |||||||||||    
T  43564929 gtgtcggtgtcggacacgacatgtgtccgacgccgggacacgcctaatccgagaagtgtccgtgcttcatag 43565000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 9 - 91
Target Start/End: Original strand, 21814309 - 21814391
Alignment:
Q  9 gtgtcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    ||||||||||||||||||| ||||||||||||| |||| | ||| ||||||| ||| |||| |||| |||  |||||||||||    
T  21814309 gtgtcggtgtcgtgtcggtgtcggacacgacacgtgtctggcacggggacacgccttatccaaggaatgttcgtgcttcatag 21814391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 56 - 93
Target Start/End: Original strand, 2548464 - 2548501
Alignment:
Q  56 gacacacctaatccgaggagtgtctgtgcttcatagat 93  Q
    ||||||||||||||||||||||||||||||||||||||    
T  2548464 gacacacctaatccgaggagtgtctgtgcttcatagat 2548501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 9 - 90
Target Start/End: Original strand, 3966551 - 3966632
Alignment:
Q  9 gtgtcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcata 90  Q
    |||||||||||||||| || |||||||| |||  ||||| |||  |||||||  ||||||||||||||||| ||||||||||    
T  3966551 gtgtcggtgtcgtgtcagtgtcggacacaacatgtgtccaacagagggacacgtctaatccgaggagtgtccgtgcttcata 3966632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 43 - 92
Target Start/End: Complemental strand, 19552524 - 19552475
Alignment:
Q  43 tgtccgacactgggacacacctaatccgaggagtgtctgtgcttcataga 92  Q
    ||||||||||| ||||||||||||||||||||||||| ||| ||||||||    
T  19552524 tgtccgacacttggacacacctaatccgaggagtgtccgtgtttcataga 19552475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 31 - 91
Target Start/End: Complemental strand, 21194123 - 21194063
Alignment:
Q  31 ggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    |||||||||||||||| ||||| ||| ||| |||||||||||||||||| |||||| ||||    
T  21194123 ggacacgacacatgtcagacaccggggcacgcctaatccgaggagtgtccgtgctttatag 21194063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 20 - 91
Target Start/End: Complemental strand, 16304437 - 16304366
Alignment:
Q  20 gtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    ||||| |||||||||||||||| || ||||||| | |||||  |||||||||||| |||| |||||||||||    
T  16304437 gtgtcagtatcggacacgacacgtgcccgacaccgagacacgtctaatccgaggaatgtccgtgcttcatag 16304366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 20 - 89
Target Start/End: Complemental strand, 18421852 - 18421779
Alignment:
Q  20 gtgtcggtatcggacacgacacatgtccgacactgggac--acac--ctaatccgaggagtgtctgtgcttcat 89  Q
    |||||||  |||||||||||||||||||| ||| |||||  ||||  |||||||||||||||||||||||||||    
T  18421852 gtgtcggcgtcggacacgacacatgtccggcaccgggactgacacgtctaatccgaggagtgtctgtgcttcat 18421779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 23 - 86
Target Start/End: Original strand, 26312820 - 26312883
Alignment:
Q  23 tcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgctt 86  Q
    ||||| |||||||||| || |||| |||||  |||||||||||||||||||||||| |||||||    
T  26312820 tcggtgtcggacacgatacgtgtctgacaccaggacacacctaatccgaggagtgtatgtgctt 26312883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 29 - 91
Target Start/End: Original strand, 14873579 - 14873641
Alignment:
Q  29 tcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    |||||| | |||| ||||| |||| ||||||| |||||||||||||||||| |||||||||||    
T  14873579 tcggacgcaacacgtgtccaacaccgggacacgcctaatccgaggagtgtccgtgcttcatag 14873641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 29 - 91
Target Start/End: Original strand, 27932292 - 27932354
Alignment:
Q  29 tcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    ||||||||||||| |||| |||||  |||||| |||||| |||||||||| ||||||||||||    
T  27932292 tcggacacgacacgtgtcggacaccaggacacgcctaattcgaggagtgtttgtgcttcatag 27932354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 15 - 93
Target Start/End: Complemental strand, 32766948 - 32766870
Alignment:
Q  15 gtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatagat 93  Q
    ||||||||||||| ||| | ||||||| ||||||||||  ||| ||  |||||| |||||||||| |||||||||||||    
T  32766948 gtgtcgtgtcggtgtcgaaaacgacacgtgtccgacaccaggatacgtctaatctgaggagtgtccgtgcttcatagat 32766870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 54 - 91
Target Start/End: Original strand, 6247692 - 6247729
Alignment:
Q  54 gggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  6247692 gggacacacctaatccgagaagtgtctgtgcttcatag 6247729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 2 - 79
Target Start/End: Original strand, 17088326 - 17088398
Alignment:
Q  2 attacaagtgtcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtc 79  Q
    ||||||||||||  |||||||||||| |||| ||||     |||||||||| ||||||| ||||||||||||||||||    
T  17088326 attacaagtgtcactgtcgtgtcggtgtcggtcacg-----tgtccgacaccgggacacgcctaatccgaggagtgtc 17088398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 43 - 92
Target Start/End: Complemental strand, 19820376 - 19820327
Alignment:
Q  43 tgtccgacactgggacacacctaatccgaggagtgtctgtgcttcataga 92  Q
    |||||||||| ||||||| ||||||| |||||||||| ||||||||||||    
T  19820376 tgtccgacaccgggacacgcctaatcagaggagtgtccgtgcttcataga 19820327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 43 - 91
Target Start/End: Original strand, 2419938 - 2419986
Alignment:
Q  43 tgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    |||||||| | |||||||||||||||||| ||||||| |||||||||||    
T  2419938 tgtccgaccccgggacacacctaatccgatgagtgtccgtgcttcatag 2419986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 47 - 91
Target Start/End: Original strand, 15884052 - 15884096
Alignment:
Q  47 cgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    ||||||||| |||| |||||||||||||||||||||| |||||||    
T  15884052 cgacactggaacacgcctaatccgaggagtgtctgtgtttcatag 15884096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 29 - 89
Target Start/End: Original strand, 43001862 - 43001922
Alignment:
Q  29 tcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcat 89  Q
    ||||||||||||| ||||  ||||  |||||| |||||||||||||||||| |||||||||    
T  43001862 tcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 43001922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 12 - 91
Target Start/End: Original strand, 16864067 - 16864146
Alignment:
Q  12 tcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    |||||||| ||| || ||| ||||||| |||| || |||||||| |||| ||||||||||| ||| | ||||||||||||    
T  16864067 tcggtgtcatgttggcatcagacacgatacatatctgacactggaacacgcctaatccgagaagtatatgtgcttcatag 16864146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 41 - 88
Target Start/End: Complemental strand, 18586279 - 18586232
Alignment:
Q  41 catgtccgacactgggacacacctaatccgaggagtgtctgtgcttca 88  Q
    |||||||||| |||| ||||||||||| ||||||||||| ||||||||    
T  18586279 catgtccgactctggaacacacctaattcgaggagtgtccgtgcttca 18586232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 13 - 88
Target Start/End: Original strand, 18592125 - 18592200
Alignment:
Q  13 cggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttca 88  Q
    ||||||||||||||| |||||||| |||| |||| ||||  |||||||  ||||| ||| ||||||| ||||||||    
T  18592125 cggtgtcgtgtcggtgtcggacacaacacgtgtctgacatcgggacacggctaattcgatgagtgtccgtgcttca 18592200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 91
Target Start/End: Complemental strand, 28588685 - 28588614
Alignment:
Q  20 gtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    |||||||| ||||||||||||||| || |||||  |||||| | |||||||| |||||||  ||||||||||    
T  28588685 gtgtcggtgtcggacacgacacatatctgacaccaggacacgcttaatccgaagagtgtccatgcttcatag 28588614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 55 - 93
Target Start/End: Complemental strand, 22423800 - 22423762
Alignment:
Q  55 ggacacacctaatccgaggagtgtctgtgcttcatagat 93  Q
    |||||| |||||||||||||||||| |||||||||||||    
T  22423800 ggacacgcctaatccgaggagtgtccgtgcttcatagat 22423762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 31 - 89
Target Start/End: Complemental strand, 24238661 - 24238603
Alignment:
Q  31 ggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcat 89  Q
    ||||||||||| ||||| |||||||||||  | |||||| ||||||||| |||||||||    
T  24238661 ggacacgacacgtgtccaacactgggacatgcataatcctaggagtgtccgtgcttcat 24238603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 14 - 79
Target Start/End: Original strand, 43554568 - 43554633
Alignment:
Q  14 ggtgtcgtgtcggtatcggaca-cgacacatgtccgacactgggacacacctaatccgaggagtgtc 79  Q
    |||||||||||||| ||||||| |||| | |||||||||| ||||||| ||||||||||| ||||||    
T  43554568 ggtgtcgtgtcggtgtcggacaccgacgcgtgtccgacac-gggacacgcctaatccgagaagtgtc 43554633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 92
Target Start/End: Original strand, 4105338 - 4105379
Alignment:
Q  51 actgggacacacctaatccgaggagtgtctgtgcttcataga 92  Q
    |||||||||| |||||||||||||||||| ||||||| ||||    
T  4105338 actgggacacgcctaatccgaggagtgtccgtgcttcgtaga 4105379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 54 - 91
Target Start/End: Original strand, 35017125 - 35017162
Alignment:
Q  54 gggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    ||||||| |||||||||||||||||| |||||||||||    
T  35017125 gggacacgcctaatccgaggagtgtccgtgcttcatag 35017162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 56 - 93
Target Start/End: Original strand, 36838615 - 36838652
Alignment:
Q  56 gacacacctaatccgaggagtgtctgtgcttcatagat 93  Q
    ||||| |||||||| |||||||||||||||||||||||    
T  36838615 gacacgcctaatccaaggagtgtctgtgcttcatagat 36838652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 55 - 91
Target Start/End: Original strand, 10298633 - 10298669
Alignment:
Q  55 ggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    |||||| |||||||||||||||||| |||||||||||    
T  10298633 ggacacgcctaatccgaggagtgtccgtgcttcatag 10298669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 43 - 91
Target Start/End: Original strand, 36640260 - 36640308
Alignment:
Q  43 tgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    ||||||||||  ||||||||||||||||| | ||| |||||||||||||    
T  36640260 tgtccgacacccggacacacctaatccgaagggtggctgtgcttcatag 36640308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 43 - 91
Target Start/End: Complemental strand, 39695998 - 39695951
Alignment:
Q  43 tgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    |||||||||| ||||||| |||||||| ||||||||| |||||||||||    
T  39695998 tgtccgacac-gggacacgcctaatcctaggagtgtcggtgcttcatag 39695951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 23 - 91
Target Start/End: Original strand, 42029803 - 42029871
Alignment:
Q  23 tcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    ||||| |||||||||||||||||| | |||   ||||| ||| |||||||||||||| |||| ||||||    
T  42029803 tcggtgtcggacacgacacatgtctgtcacgtagacacgccttatccgaggagtgtccgtgcatcatag 42029871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 20 - 92
Target Start/End: Original strand, 42893408 - 42893480
Alignment:
Q  20 gtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcataga 92  Q
    |||||||| || ||||| |||| ||||||||||  |||||| ||||||  ||||||||||  |||||||||||    
T  42893408 gtgtcggtgtcagacacaacacgtgtccgacaccaggacacgcctaatatgaggagtgtccatgcttcataga 42893480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 58; Significance: 4e-24; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 8 - 93
Target Start/End: Original strand, 241641 - 241726
Alignment:
Q  8 agtgtcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatagat 93  Q
    |||||||||||||||| ||| ||||||||||||| |||||||||| ||||||| ||||||||||| |||||| |||||||||||||    
T  241641 agtgtcggtgtcgtgttggtgtcggacacgacacgtgtccgacaccgggacacgcctaatccgagaagtgtccgtgcttcatagat 241726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 43 - 91
Target Start/End: Complemental strand, 236962 - 236914
Alignment:
Q  43 tgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    |||| ||||| ||||||||||||||| ||||||||||||||||||||||    
T  236962 tgtctgacaccgggacacacctaatctgaggagtgtctgtgcttcatag 236914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 3868 - 3778
Alignment:
Q  1 aattacaagtgtcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    ||||||||||||| ||||||||| ||| |||||||||||||||||||||||  | ||||| ||||||||||||||||||  ||||||||||    
T  3868 aattacaagtgtcagtgtcgtgttggtgtcggacacgacacatgtccgacatcgagacacgcctaatccgaggagtgtccttgcttcatag 3778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 71765 - 71855
Alignment:
Q  1 aattacaagtgtcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    |||||| |||||| ||||||||||||| |||||||| |||| |||||||||| |||||||  ||||||||||||||||| |||||||||||    
T  71765 aattactagtgtcagtgtcgtgtcggtgtcggacacaacacgtgtccgacaccgggacacgactaatccgaggagtgtcggtgcttcatag 71855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 51; Significance: 6e-20; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 20 - 90
Target Start/End: Complemental strand, 473 - 403
Alignment:
Q  20 gtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcata 90  Q
    |||||||| ||||||||||| | |||||||||| |||||||||||||||||||||||||| ||||||||||    
T  473 gtgtcggtgtcggacacgacgcgtgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcata 403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 51; Significance: 6e-20; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 2968 - 3058
Alignment:
Q  1 aattacaagtgtcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    |||||||||| || |||||||||||||||| |||||||||| ||| |||||| || |||| |||||||||||||||||| ||||| |||||    
T  2968 aattacaagtatcagtgtcgtgtcggtatcagacacgacacgtgttcgacaccggaacacgcctaatccgaggagtgtccgtgctccatag 3058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0793 (Bit Score: 49; Significance: 9e-19; HSPs: 1)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 33 - 93
Target Start/End: Complemental strand, 4879 - 4819
Alignment:
Q  33 acacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatagat 93  Q
    |||||||||||||||||||| ||||||| |||||||||||||||||| |||||||||||||    
T  4879 acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatagat 4819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0512 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold0512
Description:

Target: scaffold0512; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 20 - 91
Target Start/End: Complemental strand, 5047 - 4976
Alignment:
Q  20 gtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    |||||||| ||||||||||||| ||||||||| || ||||  ||||||||||||||||||||||||||||||    
T  5047 gtgtcggtgtcggacacgacacgtgtccgacattgagacatgcctaatccgaggagtgtctgtgcttcatag 4976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 13453 - 13543
Alignment:
Q  1 aattacaagtgtcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    ||||||| ||||||| ||||||||||| ||||||||||||| | | |||||  |||| ||||||||||||||||||||| || ||||||||    
T  13453 aattacatgtgtcggggtcgtgtcggtgtcggacacgacacgtatacgacatcgggatacacctaatccgaggagtgtccgtacttcatag 13543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 20 - 89
Target Start/End: Original strand, 13454 - 13523
Alignment:
Q  20 gtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcat 89  Q
    |||||||| |||||||||||||  ||| |||||| ||||||||||||||| ||||||||| |||||||||    
T  13454 gtgtcggtgtcggacacgacacgcgtctgacactaggacacacctaatccaaggagtgtccgtgcttcat 13523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 20 - 89
Target Start/End: Complemental strand, 21873 - 21804
Alignment:
Q  20 gtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcat 89  Q
    |||||||| |||||||||||||  ||| |||||| ||||||||||||||| ||||||||| |||||||||    
T  21873 gtgtcggtgtcggacacgacacgcgtctgacactaggacacacctaatccaaggagtgtccgtgcttcat 21804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 20 - 93
Target Start/End: Original strand, 8846 - 8919
Alignment:
Q  20 gtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatagat 93  Q
    |||||||| ||||||||||||| |||||||||| | ||||| ||||||| ||||||| || |||||||||||||    
T  8846 gtgtcggtgtcggacacgacacgtgtccgacaccgagacacgcctaatctgaggagtctccgtgcttcatagat 8919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 29 - 90
Target Start/End: Original strand, 92879 - 92940
Alignment:
Q  29 tcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcata 90  Q
    |||||||||||||||||| |||||  |||||| |||||||||||||||||| ||||||||||    
T  92879 tcggacacgacacatgtcggacacctggacacgcctaatccgaggagtgtccgtgcttcata 92940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 9 - 93
Target Start/End: Complemental strand, 44536 - 44452
Alignment:
Q  9 gtgtcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatagat 93  Q
    |||||||| |||||||||| | |||||| |||| |||||||||||||||||    ||||| ||| ||||||||||||||||||||    
T  44536 gtgtcggtatcgtgtcggtgttggacacaacacgtgtccgacactgggacatggttaatctgagaagtgtctgtgcttcatagat 44452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0380 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0380
Description:

Target: scaffold0380; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 33 - 91
Target Start/End: Original strand, 8662 - 8720
Alignment:
Q  33 acacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    ||||||||| ||||||||||||||| || |||||||| ||||||||| |||||||||||    
T  8662 acacgacacgtgtccgacactgggatacgcctaatccaaggagtgtccgtgcttcatag 8720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 23551 - 23641
Alignment:
Q  1 aattacaagtgtcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    ||||| ||||||| ||||||| ||||| |||||||||| |  ||||||| |||||||||| | |||||| || ||||| ||||||||||||    
T  23551 aattataagtgtcagtgtcgtttcggtgtcggacacgatatgtgtccgagactgggacacgcataatcccagaagtgtttgtgcttcatag 23641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 9 - 89
Target Start/End: Complemental strand, 9758 - 9678
Alignment:
Q  9 gtgtcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcat 89  Q
    ||||||||||||||| ||| || |||||||||| |||| ||||  |||||||   |||||||||||||||| |||||||||    
T  9758 gtgtcggtgtcgtgttggtgtcagacacgacacttgtctgacatcgggacacgtataatccgaggagtgtccgtgcttcat 9678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 263391 - 263303
Alignment:
Q  1 aattacaagtgtcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcat 89  Q
    ||||| ||||||| ||||||||||||| || |||||||||| ||| ||| ||   ||||| |||||||||||||||||| ||| |||||    
T  263391 aattataagtgtcagtgtcgtgtcggtgtcagacacgacacgtgttcgataccaagacacgcctaatccgaggagtgtccgtggttcat 263303  T

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Target: scaffold0475 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 48 - 91
Target Start/End: Original strand, 3384 - 3427
Alignment:
Q  48 gacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    ||||||||||||| |||||||||||||||||| |||||||||||    
T  3384 gacactgggacacgcctaatccgaggagtgtccgtgcttcatag 3427  T

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Target: scaffold0128 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 43 - 90
Target Start/End: Original strand, 32775 - 32822
Alignment:
Q  43 tgtccgacactgggacacacctaatccgaggagtgtctgtgcttcata 90  Q
    |||||||||| ||||||||| |||||||||||||||| ||||||||||    
T  32775 tgtccgacaccgggacacacataatccgaggagtgtcggtgcttcata 32822  T

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Target: scaffold0057 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 15 - 91
Target Start/End: Original strand, 24078 - 24155
Alignment:
Q  15 gtgtcgtgtcggtatcggacacgacacatgt--ccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    ||||||||||||| |||||||| |||| |||  |||||||||| |||| |||||||||| ||||||| |||||||||||    
T  24078 gtgtcgtgtcggtgtcggacacaacacgtgtgtccgacactgg-acacgcctaatccgatgagtgtccgtgcttcatag 24155  T

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Target: scaffold0044 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 53220 - 53279
Alignment:
Q  1 aattacaagtgtcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacac 60  Q
    ||||| ||||||||||| ||||||||| ||||||| ||||| |||||||||| |||||||    
T  53220 aattataagtgtcggtgccgtgtcggtgtcggacatgacacgtgtccgacaccgggacac 53279  T

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Target: scaffold0623 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 9 - 90
Target Start/End: Complemental strand, 6007 - 5926
Alignment:
Q  9 gtgtcggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcata 90  Q
    ||||||||||||| ||||| ||| ||||||||| |||| ||||| | ||||| ||| |||| ||||||||| |||| |||||    
T  6007 gtgtcggtgtcgtatcggtgtcgaacacgacacgtgtctgacacagagacacgccttatccaaggagtgtccgtgcctcata 5926  T

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Target: scaffold0697 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0697
Description:

Target: scaffold0697; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 1692 - 1732
Alignment:
Q  20 gtgtcggtatcggacacgacacatgtccgacactgggacac 60  Q
    |||||||| ||||||||||||||||||||||||| ||||||    
T  1692 gtgtcggtgtcggacacgacacatgtccgacactaggacac 1732  T

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Target: scaffold0279 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0279
Description:

Target: scaffold0279; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 17887 - 17839
Alignment:
Q  13 cggtgtcgtgtcggtatcggacacgacacatgtccgacactgggacaca 61  Q
    ||||||||| ||||| | ||||||||||| |||||||||||||||||||    
T  17887 cggtgtcgtatcggtgttggacacgacacgtgtccgacactgggacaca 17839  T

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Target: scaffold0050 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 20 - 88
Target Start/End: Original strand, 70326 - 70394
Alignment:
Q  20 gtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttca 88  Q
    |||||||| ||||||||||||| ||||||||||  |||||  |||||||||| ||||||  ||||||||    
T  70326 gtgtcggtgtcggacacgacacgtgtccgacaccaggacatgcctaatccgatgagtgttcgtgcttca 70394  T

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Target: scaffold0361 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 29 - 92
Target Start/End: Original strand, 14584 - 14647
Alignment:
Q  29 tcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcataga 92  Q
    ||||||||||||| |||||||||| | ||||| |||||||  ||||||||  ||||||||||||    
T  14584 tcggacacgacacgtgtccgacaccgagacacgcctaatcgaaggagtgtacgtgcttcataga 14647  T

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Target: scaffold0191 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0191
Description:

Target: scaffold0191; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 91
Target Start/End: Complemental strand, 31414 - 31343
Alignment:
Q  20 gtgtcggtatcggacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    |||||||| |||||||||||| ||||| |||||  |||||||  ||||| | ||||||||| ||||||||||    
T  31414 gtgtcggtgtcggacacgacaaatgtctgacaccaggacacatataatctgtggagtgtctatgcttcatag 31343  T

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Target: scaffold0021 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 32 - 91
Target Start/End: Complemental strand, 3037 - 2978
Alignment:
Q  32 gacacgacacatgtccgacactgggacacacctaatccgaggagtgtctgtgcttcatag 91  Q
    |||||||||||||||||||||||  |||| ||||||  | |||||||| |||||||||||    
T  3037 gacacgacacatgtccgacactgaaacacgcctaatatggggagtgtccgtgcttcatag 2978  T

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Target: scaffold0227 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 48 - 93
Target Start/End: Original strand, 15047 - 15092
Alignment:
Q  48 gacactgggacacacctaatccgaggagtgtctgtgcttcatagat 93  Q
    ||||| ||||||| ||| ||||||||||||| ||||||||||||||    
T  15047 gacacggggacacgccttatccgaggagtgtttgtgcttcatagat 15092  T

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