View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF11265_low_22 (Length: 258)
Name: NF11265_low_22
Description: NF11265
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11265_low_22 |
 | |
|
| [»] scaffold0074 (1 HSPs) |
| | |
|
Alignment Details
Target: chr6 (Bit Score: 238; Significance: 1e-132; HSPs: 10)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 27878869 - 27878624
Alignment:
| Q |
1 |
tgtaatttcttccacttagtgaaagttctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagtt |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27878869 |
tgtaatttcttccacttagtgaaagttctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagtt |
27878770 |
T |
|
| Q |
101 |
cctcttttctcgtctcttattttagctgcgtgataatattttgttactctggtacctaatagtggtatcagagcccttggttcgtagctgttattccgct |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
27878769 |
cctcttttctcgtctcttattttagctgcgtgataatattttgttactctggtacctaacagtggtatcagagcccctggttcgtagctgttattccgct |
27878670 |
T |
|
| Q |
201 |
gtgataaactagtggagtggtaagaaaaatcttagtatgctctgtg |
246 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27878669 |
gtgataaactagtggagtggtaagaaaaatcttagtatgctctgtg |
27878624 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 1234858 - 1235016
Alignment:
| Q |
1 |
tgtaatttcttccacttagtgaaagttctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagtt |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1234858 |
tgtaatttcttccacttagtgaaagttctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagtt |
1234957 |
T |
|
| Q |
101 |
cctcttttctcgtctcttattttagctgcgtgataatattttgttactctggtacctaa |
159 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1234958 |
cctcttttctcgtctcttattttagctgcgtgataatattttgttactctggtacctaa |
1235016 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 26976291 - 26976133
Alignment:
| Q |
1 |
tgtaatttcttccacttagtgaaagttctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagtt |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26976291 |
tgtaatttcttccacttagtgaaagttctctactcttgccccttggttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagtt |
26976192 |
T |
|
| Q |
101 |
cctcttttctcgtctcttattttagctgcgtgataatattttgttactctggtacctaa |
159 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26976191 |
cctcttttctcgtctcttattttagctgcgtgataatattttgttactctggtacctaa |
26976133 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 27874150 - 27873992
Alignment:
| Q |
1 |
tgtaatttcttccacttagtgaaagttctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagtt |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27874150 |
tgtaatttcttccacttagtgaaagttctctactcttgccccgtggttttttccctttatttgttgaggggtttccacgtaaaatattgtgtgttcagtt |
27874051 |
T |
|
| Q |
101 |
cctcttttctcgtctcttattttagctgcgtgataatattttgttactctggtacctaa |
159 |
Q |
| |
|
||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
27874050 |
cctcttttctcttctcttattttagatgcgtgataatattttgttactctggtacctaa |
27873992 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 8 - 159
Target Start/End: Original strand, 18968041 - 18968192
Alignment:
| Q |
8 |
tcttccacttagtgaaagttctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagttcctcttt |
107 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| |
|
|
| T |
18968041 |
tcttccacttagtgaaagttttctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattatgtattcagttcctcttt |
18968140 |
T |
|
| Q |
108 |
tctcgtctcttattttagctgcgtgataatattttgttactctggtacctaa |
159 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18968141 |
tctcgtctcttattttagctgcgtgataatattttgttactctggtacctaa |
18968192 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 110 - 246
Target Start/End: Original strand, 30967674 - 30967810
Alignment:
| Q |
110 |
tcgtctcttattttagctgcgtgataatattttgttactctggtacctaatagtggtatcagagcccttggttcgtagctgttattccgctgtgataaac |
209 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| || |||||||||||||||||||||| ||||||| |
|
|
| T |
30967674 |
tcgtctcttattttagctgcttgataatattttgttactctggtacctaacagtggtatcagagcctttagttcgtagctgttattccgctgcgataaac |
30967773 |
T |
|
| Q |
210 |
tagtggagtggtaagaaaaatcttagtatgctctgtg |
246 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||| |
|
|
| T |
30967774 |
tagtggtgtggtaagaaaaatcttagtatgctctgtg |
30967810 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 4 - 159
Target Start/End: Original strand, 30986668 - 30986827
Alignment:
| Q |
4 |
aatttcttccacttagtgaaagttctctactcttgccccgtggttttttcc--ccttatttgttgaggggt---ttccacgtaaaatattgtgtgttcag |
98 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||||| |||||| |
|
|
| T |
30986668 |
aatttcttccacttagtgaaagttctctactcttgccccgtggttttttttttccttatttgttgaggggtactttccacgtaaa-tattgtgcgttcag |
30986766 |
T |
|
| Q |
99 |
ttcctcttttctcgtctcttattttagctgcgtgataatattttgttactctggtacctaa |
159 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| |
|
|
| T |
30986767 |
ttcctcttttctcgtctcttattttagctacgtgataatattttgttactctgatacctaa |
30986827 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 4 - 115
Target Start/End: Original strand, 30966812 - 30966923
Alignment:
| Q |
4 |
aatttcttccacttagtgaaagttctctactcttgccccgtggtttt-ttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagttcc |
102 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| |||| || |||||||||||||| |||||||||||| ||||||||||||||||||||| |
|
|
| T |
30966812 |
aatttcttccacttagtgaaagttctctactcttgccccgtgattttatttcccttatttgttgatgggtttccacgt-aaatattgtgtgttcagttcc |
30966910 |
T |
|
| Q |
103 |
tcttttctcgtct |
115 |
Q |
| |
|
||||||||||||| |
|
|
| T |
30966911 |
tcttttctcgtct |
30966923 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 3 - 156
Target Start/End: Original strand, 21966710 - 21966860
Alignment:
| Q |
3 |
taatttcttccacttagtgaaagttctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagttcc |
102 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||| | | |||||||| |||||| ||||||||||||||| | ||||||| | |||| |||||| |
|
|
| T |
21966710 |
taatttcttccatttagtgaaagttctctactcttgccccat-gatttttccctttatttattgaggggtttccacat-aaatattttatgtttagttcc |
21966807 |
T |
|
| Q |
103 |
tcttttctcgtctcttattttagctgcgtgataatattttgttactctggtacc |
156 |
Q |
| |
|
||||||||| | | ||| ||||||||||||||||| ||| |||||| ||||||| |
|
|
| T |
21966808 |
tcttttctcatatgtta-tttagctgcgtgataatgtttcgttactttggtacc |
21966860 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 4 - 246
Target Start/End: Complemental strand, 23012656 - 23012415
Alignment:
| Q |
4 |
aatttcttccacttagtgaaagttctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagttcct |
103 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||| |||||||| ||| | |||||| || | ||||||||||||| || |||||||||| ||| | |
|
|
| T |
23012656 |
aatttctctcacttagtgaaagttctctactcttgccca-tggtttttccccttaatttgt-gacgagtttccacgtaaa-taatgtgtgttcaattctt |
23012560 |
T |
|
| Q |
104 |
ctttt-ctcgtctcttattttagctgcgtgataata-ttttgttactctggtacctaatagtggtatcagagcccttggttcgtagctgttattccgctg |
201 |
Q |
| |
|
||||| ||||||||||||||||| |||||||||||| |||| ||||| || |||| || | || || ||||| |||| |||||| |||| |||| | |
|
|
| T |
23012559 |
ctttttctcgtctcttattttagttgcgtgataatattttttttactttgttacccaacaatgtcatttgagccattggctcgtagttgttgttccacat |
23012460 |
T |
|
| Q |
202 |
tgataaactagtggagtggtaagaaaaatcttagtatgctctgtg |
246 |
Q |
| |
|
| |||| |||| |||||||||||||| ||||||||||| |||| |
|
|
| T |
23012459 |
caacaaacaagtgcagtggtaagaaaaaacttagtatgctttgtg |
23012415 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 234; Significance: 1e-129; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 9444252 - 9444007
Alignment:
| Q |
1 |
tgtaatttcttccacttagtgaaagttctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagtt |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9444252 |
tgtaatttcttccacttagtgaaagttctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagtt |
9444153 |
T |
|
| Q |
101 |
cctcttttctcgtctcttattttagctgcgtgataatattttgttactctggtacctaatagtggtatcagagcccttggttcgtagctgttattccgct |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
9444152 |
cctcttttctcgtctcttattttagctgcgtgataatattttgttactctggtacctaacagtggtatcagagccgctggttcgtagctgttattccgct |
9444053 |
T |
|
| Q |
201 |
gtgataaactagtggagtggtaagaaaaatcttagtatgctctgtg |
246 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9444052 |
gtgataaactagtggagtggtaagaaaaatcttagtatgctctgtg |
9444007 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 9439532 - 9439374
Alignment:
| Q |
1 |
tgtaatttcttccacttagtgaaagttctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagtt |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9439532 |
tgtaatttcttccacttagtgaaagttctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagtt |
9439433 |
T |
|
| Q |
101 |
cctcttttctcgtctcttattttagctgcgtgataatattttgttactctggtacctaa |
159 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9439432 |
cctcttttctcgtctcttattttagctgcgtgataatattttgttactctggtacctaa |
9439374 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 88 - 144
Target Start/End: Original strand, 4799315 - 4799371
Alignment:
| Q |
88 |
tgtgtgttcagttcctcttttctcgtctcttattttagctgcgtgataatattttgt |
144 |
Q |
| |
|
|||||||||| || |||||||||| |||||||||||||| | ||||||||||||||| |
|
|
| T |
4799315 |
tgtgtgttcaatttctcttttctcatctcttattttagcagtgtgataatattttgt |
4799371 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 234; Significance: 1e-129; HSPs: 5)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 41718567 - 41718812
Alignment:
| Q |
1 |
tgtaatttcttccacttagtgaaagttctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagtt |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41718567 |
tgtaatttcttccacttagtgaaagttctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagtt |
41718666 |
T |
|
| Q |
101 |
cctcttttctcgtctcttattttagctgcgtgataatattttgttactctggtacctaatagtggtatcagagcccttggttcgtagctgttattccgct |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
41718667 |
cctcttttctcgtctcttattttagctgcgtgataatattttgttactctggtacctaacagtggtatcagagccgctggttcgtagctgttattccgct |
41718766 |
T |
|
| Q |
201 |
gtgataaactagtggagtggtaagaaaaatcttagtatgctctgtg |
246 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41718767 |
gtgataaactagtggagtggtaagaaaaatcttagtatgctctgtg |
41718812 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 41723293 - 41723451
Alignment:
| Q |
1 |
tgtaatttcttccacttagtgaaagttctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagtt |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41723293 |
tgtaatttcttccacttagtgaaagttctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagtt |
41723392 |
T |
|
| Q |
101 |
cctcttttctcgtctcttattttagctgcgtgataatattttgttactctggtacctaa |
159 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41723393 |
cctcttttctcgtctcttattttagctgcgtgataatattttgttactctggtacctaa |
41723451 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 34360113 - 34360271
Alignment:
| Q |
1 |
tgtaatttcttccacttagtgaaagttctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagtt |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
34360113 |
tgtaatttcttccacttagtgaaagttctctactcttgccccgtggttttttccccttatttgttgaggggtttctacgtaaaatattgtgtgttcagtt |
34360212 |
T |
|
| Q |
101 |
cctcttttctcgtctcttattttagctgcgtgataatattttgttactctggtacctaa |
159 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34360213 |
cctcttttctcgtctcttattttagctgcgtgataatattttgttactctggtacctaa |
34360271 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 29585460 - 29585302
Alignment:
| Q |
1 |
tgtaatttcttccacttagtgaaagttctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagtt |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29585460 |
tgtaatttcttccacttagtgaaagttctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagtt |
29585361 |
T |
|
| Q |
101 |
cctcttttctcgtctcttattttagctgcgtgataatattttgttactctggtacctaa |
159 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||| |
|
|
| T |
29585360 |
cctcttttctcgtctcttattttagctgcatgataatattttgttactctgatacctaa |
29585302 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 34352405 - 34352546
Alignment:
| Q |
1 |
tgtaatttcttccacttagtgaaagttctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagtt |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34352405 |
tgtaatttcttccacttagtgaaagttctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagtt |
34352504 |
T |
|
| Q |
101 |
cctcttttctcgtctcttattttagctgcgtgataatatttt |
142 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34352505 |
cctcttttctcgtctcttattttagctgcgtgataatatttt |
34352546 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 234; Significance: 1e-129; HSPs: 13)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 48701981 - 48701736
Alignment:
| Q |
1 |
tgtaatttcttccacttagtgaaagttctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagtt |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
48701981 |
tgtaatttcttccacttagtgaaagttctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagtt |
48701882 |
T |
|
| Q |
101 |
cctcttttctcgtctcttattttagctgcgtgataatattttgttactctggtacctaatagtggtatcagagcccttggttcgtagctgttattccgct |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
48701881 |
cctcttttctcgtctcttattttagctgcgtgataatattttgttactctggtacctaacagtggtatcagagccgctggttcgtagctgttattccgct |
48701782 |
T |
|
| Q |
201 |
gtgataaactagtggagtggtaagaaaaatcttagtatgctctgtg |
246 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
48701781 |
gtgataaactagtggagtggtaagaaaaatcttagtatgctctgtg |
48701736 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 42266060 - 42266305
Alignment:
| Q |
1 |
tgtaatttcttccacttagtgaaagttctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagtt |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42266060 |
tgtaatttcttccacttagtgaaagttctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagtt |
42266159 |
T |
|
| Q |
101 |
cctcttttctcgtctcttattttagctgcgtgataatattttgttactctggtacctaatagtggtatcagagcccttggttcgtagctgttattccgct |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
42266160 |
cctcttttctcgtctcttattttagctgcgtgataatattttgttactctggtatctaacagtggtatcagagccgctggttcgtagctgttattccgct |
42266259 |
T |
|
| Q |
201 |
gtgataaactagtggagtggtaagaaaaatcttagtatgctctgtg |
246 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42266260 |
gtgataaactagtggagtggtaagaaaaatcttagtatgctctgtg |
42266305 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 30950342 - 30950098
Alignment:
| Q |
1 |
tgtaatttcttccacttagtgaaagttctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagtt |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30950342 |
tgtaatttcttccacttagtgaaagttctctactcttgccccgtggttttttccc-ttatttgttgaggggtttccacgtaaaatattgtgtgttcagtt |
30950244 |
T |
|
| Q |
101 |
cctcttttctcgtctcttattttagctgcgtgataatattttgttactctggtacctaatagtggtatcagagcccttggttcgtagctgttattccgct |
200 |
Q |
| |
|
||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| | ||||||||||||||||||||||| |
|
|
| T |
30950243 |
cctcttttctcttatcttattttagctgcgtgataatattttgttactctggtacctaacagtggtatcagagctcctggttcgtagctgttattccgct |
30950144 |
T |
|
| Q |
201 |
gtgataaactagtggagtggtaagaaaaatcttagtatgctctgtg |
246 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30950143 |
gtgataaactagtggagtggtaagaaaaatcttagtatgctctgtg |
30950098 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 42270779 - 42270937
Alignment:
| Q |
1 |
tgtaatttcttccacttagtgaaagttctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagtt |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42270779 |
tgtaatttcttccacttagtgaaagttctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagtt |
42270878 |
T |
|
| Q |
101 |
cctcttttctcgtctcttattttagctgcgtgataatattttgttactctggtacctaa |
159 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
42270879 |
cctcttttctcgtctcttattttagctgcgtgataatattttgttactctggtatctaa |
42270937 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 1 - 155
Target Start/End: Complemental strand, 24520185 - 24520031
Alignment:
| Q |
1 |
tgtaatttcttccacttagtgaaagttctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagtt |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24520185 |
tgtaatttcttccacttagtgaaagttctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagtt |
24520086 |
T |
|
| Q |
101 |
cctcttttctcgtctcttattttagctgcgtgataatattttgttactctggtac |
155 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
24520085 |
cctcttttctcgtctcttattttagttgcgtgataatattttgttactctggtac |
24520031 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 48697292 - 48697133
Alignment:
| Q |
1 |
tgtaatttcttccacttagtgaaagttctctactcttgccccgtggtttttt-ccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagt |
99 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
48697292 |
tgtaatttcttccacttagtgaaagttctctactcttgccccgtggtttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagt |
48697193 |
T |
|
| Q |
100 |
tcctcttttctcgtctcttattttagctgcgtgataatattttgttactctggtacctaa |
159 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
48697192 |
tcctcttttctcttctcttattttagctgcgtgataatattttgttactctggtacctaa |
48697133 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 30945636 - 30945479
Alignment:
| Q |
1 |
tgtaatttcttccacttagtgaaagttctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagtt |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30945636 |
tgtaatttcttccacttagtgaaagttctctactcttgccccgtgattttttccc-ttatttgttgaggggtttccacgtaaaatattgtgtgttcagtt |
30945538 |
T |
|
| Q |
101 |
cctcttttctcgtctcttattttagctgcgtgataatattttgttactctggtacctaa |
159 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
30945537 |
cctcttttctcttctcttattttagctgcgtgataatattttgttactctgatacctaa |
30945479 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 8 - 159
Target Start/End: Original strand, 10427444 - 10427595
Alignment:
| Q |
8 |
tcttccacttagtgaaagttctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagttcctcttt |
107 |
Q |
| |
|
|||||||||||||||||||| |||||| || |||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
10427444 |
tcttccacttagtgaaagttatctactttttccccgtagttttttccccttatttgttgaggggtttccgcgtaaaatattgtgtgttcagttcctcttt |
10427543 |
T |
|
| Q |
108 |
tctcgtctcttattttagctgcgtgataatattttgttactctggtacctaa |
159 |
Q |
| |
|
|||||||||||||||||| |||||||||||||| |||||||||||||||||| |
|
|
| T |
10427544 |
tctcgtctcttattttagttgcgtgataatattctgttactctggtacctaa |
10427595 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 48 - 148
Target Start/End: Original strand, 48782932 - 48783031
Alignment:
| Q |
48 |
tttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttattttagctgcgtgataatattttgttac |
147 |
Q |
| |
|
|||||||| |||||||||||| |||||||||||| ||||||||||||||||||| ||||||||| |||||||||| |||||||||||||||| ||| |
|
|
| T |
48782932 |
tttttccctttatttgttgagaaatttccacgtaaa-tattgtgtgttcagttcctgttttctcgtttcttattttaatcgcgtgataatattttgatac |
48783030 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 108
Target Start/End: Original strand, 17248015 - 17248112
Alignment:
| Q |
10 |
ttccacttagtgaaagttctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagttcctctttt |
108 |
Q |
| |
|
||||||||| |||||||||| ||||||| || |||||||||||||||||||| || |||| |||||| || ||||||||||| || |||| ||||||| |
|
|
| T |
17248015 |
ttccacttaatgaaagttctatactcttatccggtggttttttccccttatttattaagggatttccatgt-aaatattgtgtatttagtttctctttt |
17248112 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 82 - 159
Target Start/End: Complemental strand, 36615438 - 36615361
Alignment:
| Q |
82 |
aaatattgtgtgttcagttcctcttttctcgtctcttattttagctgcgtgataatattttgttactctggtacctaa |
159 |
Q |
| |
|
||||| ||| ||||| ||| |||||||||| | |||||||||| ||| | ||||||||||| ||||||| |||||||| |
|
|
| T |
36615438 |
aaataatgtatgttcggtttctcttttctcatatcttattttaactgtgcgataatattttattactctagtacctaa |
36615361 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 82 - 150
Target Start/End: Original strand, 30165900 - 30165968
Alignment:
| Q |
82 |
aaatattgtgtgttcagttcctcttttctcgtctcttattttagctgcgtgataatattttgttactct |
150 |
Q |
| |
|
||||||| |||||||| ||| | ||||||| | ||||||||||| || |||||| |||||||||||||| |
|
|
| T |
30165900 |
aaatattatgtgttcaattcattttttctcatatcttattttagttgtgtgatattattttgttactct |
30165968 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 95
Target Start/End: Original strand, 1979567 - 1979604
Alignment:
| Q |
57 |
ttatttgttgaggggtttccacgtaaaatattgtgtgtt |
95 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
1979567 |
ttatttgttgaggggtttccacgt-aaatattgtgtgtt |
1979604 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 234; Significance: 1e-129; HSPs: 8)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 5823435 - 5823190
Alignment:
| Q |
1 |
tgtaatttcttccacttagtgaaagttctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagtt |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5823435 |
tgtaatttcttccacttagtgaaagttctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagtt |
5823336 |
T |
|
| Q |
101 |
cctcttttctcgtctcttattttagctgcgtgataatattttgttactctggtacctaatagtggtatcagagcccttggttcgtagctgttattccgct |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
5823335 |
cctcttttctcgtctcttattttagctgcgtgataatattttgttactctggtacctaacagtggtatcagagccgctggttcgtagctgttattccgct |
5823236 |
T |
|
| Q |
201 |
gtgataaactagtggagtggtaagaaaaatcttagtatgctctgtg |
246 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5823235 |
gtgataaactagtggagtggtaagaaaaatcttagtatgctctgtg |
5823190 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 2817422 - 2817178
Alignment:
| Q |
1 |
tgtaatttcttccacttagtgaaagttctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagtt |
100 |
Q |
| |
|
|||||||||||||||||||||| |||||| ||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2817422 |
tgtaatttcttccacttagtgagagttctttactcttgccctgtggttttttccc-ttatttgttgaggggtttccacgtaaaatattgtgtgttcagtt |
2817324 |
T |
|
| Q |
101 |
cctcttttctcgtctcttattttagctgcgtgataatattttgttactctggtacctaatagtggtatcagagcccttggttcgtagctgttattccgct |
200 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| |||||||||| ||||||||||| |
|
|
| T |
2817323 |
cctcttttctcttctcttattttagctgcgtgataatattttgttactctggtacctaacagtggtatcaaagccgctggttcgtagttgttattccgca |
2817224 |
T |
|
| Q |
201 |
gtgataaactagtggagtggtaagaaaaatcttagtatgctctgtg |
246 |
Q |
| |
|
|| |||||||||||| ||||||||||||||||||||||||| |||| |
|
|
| T |
2817223 |
gtaataaactagtggtgtggtaagaaaaatcttagtatgctatgtg |
2817178 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 5818673 - 5818515
Alignment:
| Q |
1 |
tgtaatttcttccacttagtgaaagttctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagtt |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5818673 |
tgtaatttcttccacttagtgaaagttctctactcttgccccgtggttttttccccttattagttgaggggtttccacgtaaaatattgtgtgttcagtt |
5818574 |
T |
|
| Q |
101 |
cctcttttctcgtctcttattttagctgcgtgataatattttgttactctggtacctaa |
159 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
5818573 |
cctcttttctcgtctcttattttagttgcgtgataatattttgttactctggtacctaa |
5818515 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 54546041 - 54546198
Alignment:
| Q |
1 |
tgtaatttcttccacttagtgaaagttctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagtt |
100 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||| |
|
|
| T |
54546041 |
tgtaatttcatccacttagtgaaagttctctactctagccccgtggttttttccccttatttgttgaggggtttccacgt-aaatattgtatgttcagtt |
54546139 |
T |
|
| Q |
101 |
cctcttttctcgtctcttattttagctgcgtgataatattttgttactctggtacctaa |
159 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
54546140 |
cctcttttctcatctcttattttagctgcgtgataatattttgttactctggtacctaa |
54546198 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 8 - 159
Target Start/End: Complemental strand, 24659287 - 24659138
Alignment:
| Q |
8 |
tcttccacttagtgaaagttctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagttcctcttt |
107 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
24659287 |
tcttccacttagtgaaagttct--actcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatgttgtgtgttcagttcctcttt |
24659190 |
T |
|
| Q |
108 |
tctcgtctcttattttagctgcgtgataatattttgttactctggtacctaa |
159 |
Q |
| |
|
|||| |||||||||||||||| ||||||||||||| |||||||||||||||| |
|
|
| T |
24659189 |
tctcatctcttattttagctgtgtgataatattttattactctggtacctaa |
24659138 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 47 - 153
Target Start/End: Original strand, 4579254 - 4579360
Alignment:
| Q |
47 |
ttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttattttagctgcgtgataatattttgtta |
146 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
4579254 |
ttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttattttagttgcgtgataatattttgtta |
4579353 |
T |
|
| Q |
147 |
ctctggt |
153 |
Q |
| |
|
||||||| |
|
|
| T |
4579354 |
ctctggt |
4579360 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 31204926 - 31204781
Alignment:
| Q |
1 |
tgtaatttcttccacttagtgaaagttctctactcttgcc-ccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagt |
99 |
Q |
| |
|
|||||||| | ||||||||||||||||||||||| ||||| ||||| |||||||| ||||||||||||||||||||||||| |||||||||| ||||||| |
|
|
| T |
31204926 |
tgtaatttttcccacttagtgaaagttctctactattgcctccgtgattttttcctcttatttgttgaggggtttccacgt-aaatattgtgagttcagt |
31204828 |
T |
|
| Q |
100 |
tcctcttttctcgtctcttattttagctgcgtgataatattttgttac |
147 |
Q |
| |
|
||||||||| || |||||| ||||| ||||||| |||||||||||||| |
|
|
| T |
31204827 |
tcctctttt-tcatctcttcttttaactgcgtgctaatattttgttac |
31204781 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 117 - 173
Target Start/End: Original strand, 25877086 - 25877142
Alignment:
| Q |
117 |
ttattttagctgcgtgataatattttgttactctggtacctaatagtggtatcagag |
173 |
Q |
| |
|
||||||||| ||||| |||||||| ||||| |||||||||||| ||||||||||||| |
|
|
| T |
25877086 |
ttattttagttgcgtaataatattatgttattctggtacctaacagtggtatcagag |
25877142 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 219; Significance: 1e-120; HSPs: 12)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 825635 - 825881
Alignment:
| Q |
1 |
tgtaatttcttccacttagtgaaagttctctactcttgccccgtggtttt-ttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagt |
99 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
825635 |
tgtaatttcttccacttagtgaaagttctctactcttgccccgtggtttttttccccttatttgttgagtggtttccacgtaaaatattgtgtgttcagt |
825734 |
T |
|
| Q |
100 |
tcctcttttctcgtctcttattttagctgcgtgataatattttgttactctggtacctaatagtggtatcagagcccttggttcgtagctgttattccgc |
199 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
825735 |
tcctcttttctcgtctcttattttagctgcgtgataatattttgttactctggtacctaacagtggtatcagagccgctggttcgtagctgttattccgc |
825834 |
T |
|
| Q |
200 |
tgtgataaactagtggagtggtaagaaaaatcttagtatgctctgtg |
246 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
825835 |
tgtgataaactagtgaagtggtaagaaaaatcttagtatgctctgtg |
825881 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 15603034 - 15603272
Alignment:
| Q |
1 |
tgtaatttcttccacttagtgaaagttctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagtt |
100 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15603034 |
tgtaatttcttctacttagtgaaagttctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagtt |
15603133 |
T |
|
| Q |
101 |
cctcttttctcgtctcttattttagctgcgtgataatattttgttactctggtacctaatagtggtatcagagcccttggttcgtagctgttattccgct |
200 |
Q |
| |
|
|||||||||||||||||||||| | |||||||||||||||| ||||||| ||| || |||| |||||||| | |||||||||| |||||||||| | |
|
|
| T |
15603134 |
cctcttttctcgtctcttatttcaattgcgtgataatattttcttactctcacacccaacagtgctatcagagtcattggttcgtaattgttattccgat |
15603233 |
T |
|
| Q |
201 |
gtgataaactagtggagtggtaagaaaaatcttagtatg |
239 |
Q |
| |
|
| | ||||| |||||||||||||||| ||||||||||| |
|
|
| T |
15603234 |
gcaaaaaactggtggagtggtaagaaatatcttagtatg |
15603272 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 5198815 - 5198664
Alignment:
| Q |
1 |
tgtaatttcttccacttagtgaaagttctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagtt |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5198815 |
tgtaatttcttccacttagtgaaagttctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagtt |
5198716 |
T |
|
| Q |
101 |
cctcttttctcgtctcttattttagctgcgtgataatattttgttactctgg |
152 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5198715 |
cctcttttctcgtctcttattttagctgcgtgataatattttgttactctgg |
5198664 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 830291 - 830450
Alignment:
| Q |
1 |
tgtaatttcttccacttagtgaaagttctctactcttgccccgtggtttt-ttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagt |
99 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
830291 |
tgtaatttcttccacttagtgaaagttctccactcttgccccgtggtttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagt |
830390 |
T |
|
| Q |
100 |
tcctcttttctcgtctcttattttagctgcgtgataatattttgttactctggtacctaa |
159 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
830391 |
tcctcttttctcgtctcttattttaactgcgtgataatattttgttactctggtacctaa |
830450 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 30397070 - 30396909
Alignment:
| Q |
1 |
tgtaatttcttccacttagtgaaa-gttctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagt |
99 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||| |||| ||| |||||| |||||||||||||||||||||| ||| ||||||| ||||||||||| |
|
|
| T |
30397070 |
tgtaatttcttccacttagtgaaaagttctctactctcgccctgtgatttttttcccttatttgttgaggggtttcaacg-aaaatat-gtgtgttcagt |
30396973 |
T |
|
| Q |
100 |
tcctcttttctcgtctcttattttagctgcgtgataatattttgttactctggtacctaatagt |
163 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||||||||||||| |||||||| ||| |||||| |
|
|
| T |
30396972 |
tcgtcttttctcgtctcttattttagctgcgtgataatattttgctactctggcacccaatagt |
30396909 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 28715919 - 28716070
Alignment:
| Q |
1 |
tgtaatttcttccacttagtgaaagttctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagtt |
100 |
Q |
| |
|
||||||||||||||||| |||||||||||||| |||| | ||||||||| |||||||||| ||||||||||||||||||| ||||||||||||| || |
|
|
| T |
28715919 |
tgtaatttcttccactttgtgaaagttctctattcttctcttgtggttttt-ccccttatttaatgaggggtttccacgtaaa-tattgtgtgttcaatt |
28716016 |
T |
|
| Q |
101 |
cctcttttctcgtctcttattttagctgcgtgataatattttgttactctggta |
154 |
Q |
| |
|
|||||||| ||||||||||||||| || ||||||||||||||||||||||||| |
|
|
| T |
28716017 |
cctcttttgtcgtctcttattttaaatgtgtgataatattttgttactctggta |
28716070 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 31593068 - 31592923
Alignment:
| Q |
1 |
tgtaatttcttccacttagtgaaagttctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagtt |
100 |
Q |
| |
|
||||||||||| | |||||||||||||||||||||| | |||||||||| | |||||| ||||| | |||||||||||| |||||| |||| ||| |
|
|
| T |
31593068 |
tgtaatttctttcggttagtgaaagttctctactcttatct-gtggttttttttc-ttatttattgagagatttccacgtaaattattgtatgttatgtt |
31592971 |
T |
|
| Q |
101 |
cctcttttctcgtctcttattttagctgcgtgataatattttgttact |
148 |
Q |
| |
|
||||||||||||||||||||| || ||| ||||||||||| ||||||| |
|
|
| T |
31592970 |
cctcttttctcgtctcttattctatctgtgtgataatattatgttact |
31592923 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 48 - 239
Target Start/End: Complemental strand, 13843908 - 13843719
Alignment:
| Q |
48 |
tttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagttc-ctcttttctcgtctcttattttagctgcgtgataatattttgtta |
146 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||| |||||||| ||| || || ||||||| |||| |||| | |||||||||||||| ||| |
|
|
| T |
13843908 |
tttttctccttatttgttgaggggtttccacgtaaa-tattgtgt--tcatttttcttttttctcaaaacttactttacttacgtgataatattttatta |
13843812 |
T |
|
| Q |
147 |
ctctggtacctaatagtggtatcagagcccttggttcgtagctgttattccgctgtgataaactagtggagtggtaagaaaaatcttagtatg |
239 |
Q |
| |
|
||||| || | | |||||||| |||||| |||| |||| ||| ||||||||| ||||| ||||||||||||||||||| |||||||| |
|
|
| T |
13843811 |
ctctgatagccacaagtggtattagagccattggctcgtgatagttgttccgctgtagcaaactggtggagtggtaagaaaaatattagtatg |
13843719 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 141
Target Start/End: Complemental strand, 12175881 - 12175768
Alignment:
| Q |
26 |
ttctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttattttag |
125 |
Q |
| |
|
||||||||||||| || | ||||||||| |||||| ||||| |||||||| ||||||||||||||||| || || |||| || ||| ||||||||| |
|
|
| T |
12175881 |
ttctctactcttgtccaattgttttttcca-ttatttattgagatgtttccaca-aaaatattgtgtgttcaatttcttttttatcatcttttattttag |
12175784 |
T |
|
| Q |
126 |
ctgcgtgataatattt |
141 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
12175783 |
ttgcgtgataatattt |
12175768 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 156
Target Start/End: Complemental strand, 13840311 - 13840245
Alignment:
| Q |
90 |
tgtgttcagttcctcttttctcgtctcttattttagctgcgtgataatattttgttactctggtacc |
156 |
Q |
| |
|
||||||| ||||||| |||||| ||| ||||| || | |||||||||||||||||| ||||||||| |
|
|
| T |
13840311 |
tgtgttcggttcctcctttctcatcttttattataattacgtgataatattttgttattctggtacc |
13840245 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 97 - 146
Target Start/End: Complemental strand, 9358207 - 9358158
Alignment:
| Q |
97 |
agttcctcttttctcgtctcttattttagctgcgtgataatattttgtta |
146 |
Q |
| |
|
||||| ||||||||||||| || |||||||||||| ||||||||| |||| |
|
|
| T |
9358207 |
agttcttcttttctcgtctgttgttttagctgcgtaataatatttggtta |
9358158 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 100
Target Start/End: Original strand, 42117798 - 42117876
Alignment:
| Q |
20 |
tgaaagttctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagtt |
100 |
Q |
| |
|
|||||||| |||||| ||| | ||||||||| |||||||||| ||||| |||||| |||| ||||||||| ||||||||| |
|
|
| T |
42117798 |
tgaaagttatctacttttgtctcgtggtttt-tccccttattaattgagaggtttctacgt-aaatattgtatgttcagtt |
42117876 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 149; Significance: 8e-79; HSPs: 7)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 8 - 156
Target Start/End: Complemental strand, 16183784 - 16183636
Alignment:
| Q |
8 |
tcttccacttagtgaaagttctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagttcctcttt |
107 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16183784 |
tcttccacttagtgaaagttctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagttcctcttt |
16183685 |
T |
|
| Q |
108 |
tctcgtctcttattttagctgcgtgataatattttgttactctggtacc |
156 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16183684 |
tctcgtctcttattttagctgcgtgataatattttgttactctggtacc |
16183636 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 3 - 185
Target Start/End: Complemental strand, 8140121 - 8139940
Alignment:
| Q |
3 |
taatttcttccacttagtgaaagttctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagttcc |
102 |
Q |
| |
|
|||||||||||||| |||||||||| |||| |||| |||| ||||||| ||||||||||||||||||||||||||| |||| ||||||| |||||||| | |
|
|
| T |
8140121 |
taatttcttccactgagtgaaagttttctaatcttaccccatggttttctccccttatttgttgaggggtttccacataaa-tattgtgcgttcagtttc |
8140023 |
T |
|
| Q |
103 |
tcttttctcgtctcttattttagctgcgtgataatattttgttactctggtacctaatagtggtatcagagcccttggttcgt |
185 |
Q |
| |
|
||||||||| |||||||||||||||| ||||||||||||||||||||||||||| || |||||||| |||||| ||||||||| |
|
|
| T |
8140022 |
tcttttctcatctcttattttagctgtgtgataatattttgttactctggtacccaacagtggtattagagccattggttcgt |
8139940 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 8138619 - 8138384
Alignment:
| Q |
1 |
tgtaatttcttccacttagtgaaagttctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagtt |
100 |
Q |
| |
|
|||||||||||||| ||||||||||||||||| ||||||| ||||||||| ||||||| |||||| |||||||||||| ||| || |||||||| |||| |
|
|
| T |
8138619 |
tgtaatttcttccatttagtgaaagttctctaatcttgcctcgtggttttctccccttgtttgttaaggggtttccacataat-tactgtgtgttaagtt |
8138521 |
T |
|
| Q |
101 |
cctcttttctcgtctcttattttagctgcgtgataatattttgttactctggtacctaatagtggtatcagagcccttggttcgtagctgttattccgct |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||| ||||||| |||| || |||||||| |||||| ||||||||| | ||||||| || |
|
|
| T |
8138520 |
tttcttttctcgtctcttattttagctgcgtgataatactttgatactctgctacccaacagtggtattagagccattggttcgttgtcgttattctgcc |
8138421 |
T |
|
| Q |
201 |
gtgataaactagtggagtggtaagaaaaatcttagtatgct |
241 |
Q |
| |
|
| |||| || ||||||||||||||||||||||||||| |
|
|
| T |
8138420 |
g----caactggtcgagtggtaagaaaaatcttagtatgct |
8138384 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 30235179 - 30235334
Alignment:
| Q |
1 |
tgtaatttcttccacttagtgaaagttctctactcttgccccgtggtttttt-ccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagt |
99 |
Q |
| |
|
|||||||||||| | ||| |||||||| ||||||||| ||||||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
30235179 |
tgtaatttcttctagttattgaaagttttctactcttatcccgtggtttttttccccttattcgttgaggggtttccacgtaaa-tattgtgtgttcagt |
30235277 |
T |
|
| Q |
100 |
tcctcttttctcgtctcttattttagctgcgtgataatattttgttactctggtacc |
156 |
Q |
| |
|
|||||||||||| | | |||||||||||| || ||||||||||| |||||||||||| |
|
|
| T |
30235278 |
tcctcttttctcattttttattttagctgtgtaataatattttgctactctggtacc |
30235334 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 161 - 246
Target Start/End: Original strand, 25441076 - 25441161
Alignment:
| Q |
161 |
agtggtatcagagcccttggttcgtagctgttattccgctgtgataaactagtggagtggtaagaaaaatcttagtatgctctgtg |
246 |
Q |
| |
|
||||||||||||||| ||| || |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25441076 |
agtggtatcagagccattgatttgtagttgttattccgctgtgataaactagtggagtggtaagaaaaatcttagtatgctctgtg |
25441161 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 3 - 148
Target Start/End: Complemental strand, 5102749 - 5102606
Alignment:
| Q |
3 |
taatttcttccacttagtgaaagttctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagttcc |
102 |
Q |
| |
|
|||||||| ||||||||| |||||| ||||||||||| || ||| |||||||||||||||||||| |||||| || || ||||||| ||| || ||| || |
|
|
| T |
5102749 |
taatttctcccacttagtaaaagttatctactcttgctccatgg-tttttccccttatttgttga-gggttttcatgt-aaatattatgtatttagtccc |
5102653 |
T |
|
| Q |
103 |
tc-ttttctcgtctcttattttagctgcgtgataatattttgttact |
148 |
Q |
| |
|
|| ||||||| ||| ||||||||| || ||||||||||||||||||| |
|
|
| T |
5102652 |
tctttttctcatcttttattttagttgagtgataatattttgttact |
5102606 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 46 - 156
Target Start/End: Complemental strand, 36528529 - 36528420
Alignment:
| Q |
46 |
gttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttattttagctgcgtgataatattttgtt |
145 |
Q |
| |
|
||||||| ||||||| || |||||||||||||||||| ||||||||||||| ||||||| ||||| ||||||||||||| ||||| || || |||||| |
|
|
| T |
36528529 |
gttttttttccttattcgtggaggggtttccacgtaaa-tattgtgtgttcaattcctctattctcatctcttattttagttgcgtaattttactttgtt |
36528431 |
T |
|
| Q |
146 |
actctggtacc |
156 |
Q |
| |
|
|||||| |||| |
|
|
| T |
36528430 |
actctgatacc |
36528420 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0074 (Bit Score: 144; Significance: 8e-76; HSPs: 1)
Name: scaffold0074
Description:
Target: scaffold0074; HSP #1
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 8 - 159
Target Start/End: Complemental strand, 27379 - 27228
Alignment:
| Q |
8 |
tcttccacttagtgaaagttctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagttcctcttt |
107 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||| |
|
|
| T |
27379 |
tcttccacttagtgaaagttctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaagtattgtgtgttcagtttctcttt |
27280 |
T |
|
| Q |
108 |
tctcgtctcttattttagctgcgtgataatattttgttactctggtacctaa |
159 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27279 |
tctcgtctcttattttagctgcgtgataatattttgttactctggtacctaa |
27228 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 129; Significance: 7e-67; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 8 - 159
Target Start/End: Original strand, 46191395 - 46191544
Alignment:
| Q |
8 |
tcttccacttagtgaaagttctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagttcctcttt |
107 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
46191395 |
tcttccacttagtgaaagttctctactcttgtcccgtggttttttccccttatttgttgaggggtttccacgtaaaatat--tgtgttcagttcctcttt |
46191492 |
T |
|
| Q |
108 |
tctcgtctcttattttagctgcgtgataatattttgttactctggtacctaa |
159 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||||||| ||||| |
|
|
| T |
46191493 |
tctcgtctcttattttagctgcatgataatattttgttactctggttcctaa |
46191544 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 30697274 - 30697120
Alignment:
| Q |
1 |
tgtaatttcttccacttagtgaaagttctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagtt |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||| ||||||| |||||| |||| |
|
|
| T |
30697274 |
tgtaatttcttccacttagtgaaagttctctactcttgccacgtggctttttccccttatttgttgaggggtttccacgt-aaatattttgtgttaagtt |
30697176 |
T |
|
| Q |
101 |
cctcttttctcgtctcttattttagctgcgtgataatattttgttactctggtacc |
156 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| |
|
|
| T |
30697175 |
cctcttttctcgtctcttatgttagctgcgtgataatattttgttactctagtacc |
30697120 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 8 - 159
Target Start/End: Original strand, 4130249 - 4130399
Alignment:
| Q |
8 |
tcttccacttagtgaaagttctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagttcctcttt |
107 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||| ||||||||||||||||||||| |
|
|
| T |
4130249 |
tcttccacttagtgaaagttctctactcttgccccgtggttttttccctttatttgttgagggatttccacgt-aaattttgtgtgttcagttcctcttt |
4130347 |
T |
|
| Q |
108 |
tctcgtctcttattttagctgcgtgataatattttgttactctggtacctaa |
159 |
Q |
| |
|
||||||| |||||||||| ||||||||||||||||||||||| |||||||| |
|
|
| T |
4130348 |
tctcgtcacttattttagttgcgtgataatattttgttactcaagtacctaa |
4130399 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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