View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11265_low_9 (Length: 363)
Name: NF11265_low_9
Description: NF11265
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11265_low_9 |
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Alignment Details
Target: chr3 (Bit Score: 317; Significance: 1e-179; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 317; E-Value: 1e-179
Query Start/End: Original strand, 13 - 345
Target Start/End: Original strand, 1769241 - 1769573
Alignment:
| Q |
13 |
gagatgaaattgaaagtggaatattcccggaaaatttgttgtgagaaagttcgagaataataaggttttttaaggaagtgaaaatatcaggtatgttacc |
112 |
Q |
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| T |
1769241 |
gagatgaaattgaaagtggaatattcccggaaaatttgttgtgagaaagttggagaataataaggttttttaaggaagtgaaaatatcaggtatgttacc |
1769340 |
T |
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| Q |
113 |
actaagttggtttccttggagactaaggtatgtgagatttgttaggtttttaagggatactggaatggttcctgtgagaaaattgttacctagttttaac |
212 |
Q |
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| T |
1769341 |
actaagttggtttccttggagactaaggtatgtgagatttgttaggtttttaagggatactggaatggttcctgtgagaaaattgttacctagttttaac |
1769440 |
T |
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| Q |
213 |
tgagttactttagtcaatgcagatattgaactaggaattggtcctgtgaatttgtttccttgtagactaaatgcttctaattggttcatgttgcctatgt |
312 |
Q |
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| T |
1769441 |
tgagttaatttagtcaatgcagatattgaactaggaattggtcctgtgaatttgttttcttgtagactaaatgcttctaattggttcatgctgcctatgt |
1769540 |
T |
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| Q |
313 |
tttggggtattggaccagataatgtgttattct |
345 |
Q |
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| T |
1769541 |
tttggggtattggaccagataatgtgttattct |
1769573 |
T |
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