View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF11266_low_16 (Length: 367)
Name: NF11266_low_16
Description: NF11266
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11266_low_16 |
 | |
|
| [»] chr1 (1 HSPs) |
| |
|
Alignment Details
Target: chr1 (Bit Score: 355; Significance: 0; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 355; E-Value: 0
Query Start/End: Original strand, 1 - 367
Target Start/End: Original strand, 21150274 - 21150640
Alignment:
| Q |
1 |
gattccaatcatcacatttatatcttgatggtattgctgagttaacctcaaatggcttactaagactcactagtgatacagatcatgaaatagggcatgc |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21150274 |
gattccaatcatcacatttatatcttgatggtattgctgagttaacctcaaatggcttactaagactcactagtgatacagatcatgaaatagggcatgc |
21150373 |
T |
|
| Q |
101 |
tttctatccaaatcctatagttttcgaaaacacttccggcgaaagtgtgttttctttttcaactacttttgtatttgccataagacctcaatctccaact |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
21150374 |
tttctatccaaatcctatagttttcgaaaacacttccggcgaaagtgtgttttctttttcaactacttttgtatttgccataagacctcaatatccaact |
21150473 |
T |
|
| Q |
201 |
cttggtggccatggaattgtttttgttatttctcctacaaaagggctaccaaattcactatcaacacaataccttggtctctttaacaattccaacaatg |
300 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
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|
| T |
21150474 |
cttggtggccatggaattgtttttgttatttctcctacaaaagagctaccaaattcactaccaacacaataccttggtctctttaacaattccaacaatg |
21150573 |
T |
|
| Q |
301 |
gaaacagtagcaaccatgtttttggtgttgagcttgacactgttcaagattttgagtttgatgatat |
367 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21150574 |
gaaacagtagcaaccatgtttttggtgttgagcttgacactgttcaagattttgagtttgatgatat |
21150640 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 229; Significance: 1e-126; HSPs: 18)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 1 - 365
Target Start/End: Complemental strand, 22805749 - 22805385
Alignment:
| Q |
1 |
gattccaatcatcacatttatatcttgatggtattgctgagttaacctcaaatggcttactaagactcactagtgatacagatcatgaaatagggcatgc |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||||||||||| | ||||||||| || | |||||| ||||| |
|
|
| T |
22805749 |
gattccaatcatcacatttatatcttgatggttttgctgagttaacctcagatggcatactaagactcaccaatgatacagaacaagtaataggtcatgc |
22805650 |
T |
|
| Q |
101 |
tttctatccaaatcctatagttttcgaaaacacttccggcgaaagtgtgttttctttttcaactacttttgtatttgccataagacctcaatctccaact |
200 |
Q |
| |
|
||||||||||||||| ||||||||| ||||||||||| | |||||||||| |||||| ||||||||||||||||||||||||| |||||||| |||| || |
|
|
| T |
22805649 |
tttctatccaaatccaatagttttcaaaaacacttccagtgaaagtgtgtcttctttctcaactacttttgtatttgccataatacctcaatatccacct |
22805550 |
T |
|
| Q |
201 |
cttggtggccatggaattgtttttgttatttctcctacaaaagggctaccaaattcactatcaacacaataccttggtctctttaacaattccaacaatg |
300 |
Q |
| |
|
|| |||||||||||||||||||||| ||||||| |||||||||||||||||||||||| ||| |||||||||||||||||||| |||||||||||| |
|
|
| T |
22805549 |
tttactggccatggaattgtttttgttctttctccaacaaaagggctaccaaattcactaccaaatcaataccttggtctctttaatgattccaacaatg |
22805450 |
T |
|
| Q |
301 |
gaaacagtagcaaccatgtttttggtgttgagcttgacactgttcaagattttgagtttgatgat |
365 |
Q |
| |
|
|||||||| |||||||||||||||||||||| ||||||||| | ||||||||||||||| |||| |
|
|
| T |
22805449 |
gaaacagtggcaaccatgtttttggtgttgaacttgacacttctaaagattttgagtttggtgat |
22805385 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 1 - 367
Target Start/End: Complemental strand, 22815467 - 22815101
Alignment:
| Q |
1 |
gattccaatcatcacatttatatcttgatggtattgctgagttaacctcaaatggcttactaagactcactagtgatacagatcatgaaatagggcatgc |
100 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||| | ||||||||| | | ||| |||| |
|
|
| T |
22815467 |
gattccaatcatcacatttaaatcttgatggtattgctgagttaacctcaaatggcttactaaaactcaccaatgatacagaaagagccaaaggatatgc |
22815368 |
T |
|
| Q |
101 |
tttctatccaaatcctatagttttcgaaaacacttccggcgaaagtgtgttttctttttcaactacttttgtatttgccataagacctcaatctccaact |
200 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||| |||||||||| |||||| |||||||||||||| ||||| ||||||||||||| |||| || |
|
|
| T |
22815367 |
tttctatccaaatcctatagttttcaaaaacacttccaatgaaagtgtgtcttctttctcaactacttttgtgtttgcaataagacctcaatatccacct |
22815268 |
T |
|
| Q |
201 |
cttggtggccatggaattgtttttgttatttctcctacaaaagggctaccaaattcactatcaacacaataccttggtctctttaacaattccaacaatg |
300 |
Q |
| |
|
|| ||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| |||||||||||| |
|
|
| T |
22815267 |
tttagtggccaaggaattgtttttgttctttctcctacaaaagggctaccaaattcactaccaagtcaataccttggtctctttaacgattccaacaatg |
22815168 |
T |
|
| Q |
301 |
gaaacagtagcaaccatgtttttggtgttgagcttgacactgttcaagattttgagtttgatgatat |
367 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| |
|
|
| T |
22815167 |
gaaacagtaacaaccatgtttttggtgttgagcttgacactcgtcaagatttgcagtttgatgatat |
22815101 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 1 - 367
Target Start/End: Complemental strand, 22889732 - 22889366
Alignment:
| Q |
1 |
gattccaatcatcacatttatatcttgatggtattgctgagttaacctcaaatggcttactaagactcactagtgatacagatcatgaaatagggcatgc |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| | ||||||||| || | ||| |||| |
|
|
| T |
22889732 |
gattccaatcatcacatttatatcttgatggtattgctgagttaactacaaatggcttactaaaactcaccaatgatacagaaagagacaaaggacatgg |
22889633 |
T |
|
| Q |
101 |
tttctatccaaatcctatagttttcgaaaacacttccggcgaaagtgtgttttctttttcaactacttttgtatttgccataagacctcaatctccaact |
200 |
Q |
| |
|
||||||||||||||| ||||||||| ||||||||||| | ||||| |||| |||||| |||||||||||| |||||||||||| |||||||| | ||| | |
|
|
| T |
22889632 |
tttctatccaaatccaatagttttcaaaaacacttccagtgaaagcgtgtcttctttctcaactacttttttatttgccataatacctcaatatgcaaat |
22889533 |
T |
|
| Q |
201 |
cttggtggccatggaattgtttttgttatttctcctacaaaagggctaccaaattcactatcaacacaataccttggtctctttaacaattccaacaatg |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||| ||| ||||||||||||||||||||| ||||||||| || |
|
|
| T |
22889532 |
attggtggccatggaattgtttttgttatttctccaacaaaagggctaccagattcactaccaagtcaataccttggtctctttaacgattccaacagtg |
22889433 |
T |
|
| Q |
301 |
gaaacagtagcaaccatgtttttggtgttgagcttgacactgttcaagattttgagtttgatgatat |
367 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| |
|
|
| T |
22889432 |
gaaacagtagcaaccatgtttttggtgttgagcttgacactcgtcaaaattttgagtttgatgatat |
22889366 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 1 - 337
Target Start/End: Complemental strand, 22876356 - 22876020
Alignment:
| Q |
1 |
gattccaatcatcacatttatatcttgatggtattgctgagttaacctcaaatggcttactaagactcactagtgatacagatcatgaaatagggcatgc |
100 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||||||||| |||||| ||| |||| |
|
|
| T |
22876356 |
gattccaatcatcaaatttatatcttgatggtattgctgagttaacctcaaatggcttactaaaactcaccaatgatacagaatatgaaaaaggacatgg |
22876257 |
T |
|
| Q |
101 |
tttctatccaaatcctatagttttcgaaaacacttccggcgaaagtgtgttttctttttcaactacttttgtatttgccataagacctcaatctccaact |
200 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||| | |||||||| |||||| |||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
22876256 |
tttctatccaaatcctatagttttcaaaaacacttccaatggaagtgtgtcttctttctcaactacttttgtatttgccataagacctcaatatccaact |
22876157 |
T |
|
| Q |
201 |
cttggtggccatggaattgtttttgttatttctcctacaaaagggctaccaaattcactatcaacacaataccttggtctctttaacaattccaacaatg |
300 |
Q |
| |
|
|| |||| ||||||||||||||||| ||||||||||||||||||||||||| |||||| || |||||||||||||||||||||||||| ||||||| |
|
|
| T |
22876156 |
attagtggtgatggaattgtttttgttgtttctcctacaaaagggctaccaaactcactaccacgtcaataccttggtctctttaacaattcaaacaatg |
22876057 |
T |
|
| Q |
301 |
gaaacagtagcaaccatgtttttggtgttgagcttga |
337 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
22876056 |
gaaacagtagcaaccatgtttttggtgttgaacttga |
22876020 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 367
Target Start/End: Complemental strand, 22840492 - 22840126
Alignment:
| Q |
1 |
gattccaatcatcacatttatatcttgatggtattgctgagttaacctcaaatggcttactaagactcactagtgatacagatcatgaaatagggcatgc |
100 |
Q |
| |
|
|||||||||||||| |||||||||||||||||| ||||||||| |||||| |||||||||||||||||| | ||||||| | || |||| ||| || || |
|
|
| T |
22840492 |
gattccaatcatcaaatttatatcttgatggtaccgctgagttagcctcaactggcttactaagactcaccaatgatacaaaacaagaaaaaggacaagc |
22840393 |
T |
|
| Q |
101 |
tttctatccaaatcctatagttttcgaaaacacttccggcgaaagtgtgttttctttttcaactacttttgtatttgccataagacctcaatctccaact |
200 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||| ||| |||||| | |||||| |||||||||||||||||| |||||| | || || ||||||| |
|
|
| T |
22840392 |
tttctatccaaatcctatagttttcaaaaacacttccagcggaagtgtttcttctttctcaactacttttgtattttccataaaatcttcatatccaact |
22840293 |
T |
|
| Q |
201 |
cttggtggccatggaattgtttttgttatttctcctacaaaagggctaccaaattcactatcaacacaataccttggtctctttaacaattccaacaatg |
300 |
Q |
| |
|
||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| | ||||||| || |
|
|
| T |
22840292 |
cttagtggccatggaattgttttcgttatttctcctacaaaagggctaccaaattcactaccaagtcaataccttggtctctttaaccaatccaacattg |
22840193 |
T |
|
| Q |
301 |
gaaacagtagcaaccatgtttttggtgttgagcttgacactgttcaagattttgagtttgatgatat |
367 |
Q |
| |
|
||||| || |||||||||||||||||||||| ||||| ||| ||| | | ||||||||||||||| |
|
|
| T |
22840192 |
gaaacggtggcaaccatgtttttggtgttgaacttgatactcttctaagtagtgagtttgatgatat |
22840126 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 3 - 337
Target Start/End: Complemental strand, 22898701 - 22898367
Alignment:
| Q |
3 |
ttccaatcatcacatttatatcttgatggtattgctgagttaacctcaaatggcttactaagactcactagtgatacagatcatgaaatagggcatgctt |
102 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| | |||||||| ||||||||||| |||||||| | |||||| | || |||| || ||||||| |
|
|
| T |
22898701 |
ttccaatcatcacatttatatcttgatggtattgctaatttaacctccaatggcttacttagactcaccaatgataccaagcaagaaaaagcacatgctt |
22898602 |
T |
|
| Q |
103 |
tctatccaaatcctatagttttcgaaaacacttccggcgaaagtgtgttttctttttcaactacttttgtatttgccataagacctcaatctccaactct |
202 |
Q |
| |
|
||||||||||||||||||||||| | |||||||| | |||||| | |||||| |||||||||||||| ||||||||||||||||||| ||||||||| |
|
|
| T |
22898601 |
tctatccaaatcctatagttttcaagaacacttctaatggaagtgtttcttctttctcaactacttttgtgtttgccataagacctcaatatccaactct |
22898502 |
T |
|
| Q |
203 |
tggtggccatggaattgtttttgttatttctcctacaaaagggctaccaaattcactatcaacacaataccttggtctctttaacaattccaacaatgga |
302 |
Q |
| |
|
| ||||||||||||||||||||||| | |||||||||||||||||||||||||||||| || ||||||||||||||||||||||| |||||||||||| |
|
|
| T |
22898501 |
tagtggccatggaattgtttttgttgtctctcctacaaaagggctaccaaattcactacaaagtcaataccttggtctctttaacaaatccaacaatgga |
22898402 |
T |
|
| Q |
303 |
aacagtagcaaccatgtttttggtgttgagcttga |
337 |
Q |
| |
|
|| |||||||||||||||||||||||||| ||||| |
|
|
| T |
22898401 |
aatagtagcaaccatgtttttggtgttgaacttga |
22898367 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 3 - 331
Target Start/End: Complemental strand, 22810082 - 22809754
Alignment:
| Q |
3 |
ttccaatcatcacatttatatcttgatggtattgctgagttaacctcaaatggcttactaagactcactagtgatacagatcatgaaatagggcatgctt |
102 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||| | ||||||||| ||||||| ||| ||||||| |
|
|
| T |
22810082 |
ttccaatcatcacatttatatcttgatggtattgctgagttaaccccagatggcttactaagactcaccaatgatacagaacatgaaaaaggacatgctt |
22809983 |
T |
|
| Q |
103 |
tctatccaaatcctatagttttcgaaaacacttccggcgaaagtgtgttttctttttcaactacttttgtatttgccataagacctcaatctccaactct |
202 |
Q |
| |
|
|||||||||||||| |||||||| |||||||| | | |||||||| | |||||| |||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
22809982 |
tctatccaaatcctgtagttttcaaaaacactatcagtgaaagtgtatcttctttctcaactacttttgtatttgccataagacctcaatatccaactct |
22809883 |
T |
|
| Q |
203 |
tggtggccatggaattgtttttgttatttctcctacaaaagggctaccaaattcactatcaacacaataccttggtctctttaacaattccaacaatgga |
302 |
Q |
| |
|
| || |||||||||||| |||||| |||| |||||||||||||| ||||||||| | ||| ||||| ||||||||||||||| | |||||||||||| |
|
|
| T |
22809882 |
tagttcccatggaattgtatttgttgtttcacctacaaaagggctgccaaattcaaaagcaagtcaatatcttggtctctttaaccaatccaacaatgga |
22809783 |
T |
|
| Q |
303 |
aacagtagcaaccatgtttttggtgttga |
331 |
Q |
| |
|
|||||||| ||||||||||| |||||||| |
|
|
| T |
22809782 |
aacagtagtaaccatgttttcggtgttga |
22809754 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 173; E-Value: 6e-93
Query Start/End: Original strand, 3 - 367
Target Start/End: Complemental strand, 22831469 - 22831105
Alignment:
| Q |
3 |
ttccaatcatcacatttatatcttgatggtattgctgagttaacctcaaatggcttactaagactcactagtgatacagatcatgaaatagggcatgctt |
102 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| | |||||| | | || | || |||||| |
|
|
| T |
22831469 |
ttccaatcatcacatttatatcttgatggtattgctgagttaacttcagatggcttactaagactcaccaatgataccgggccagatacagcatatgctt |
22831370 |
T |
|
| Q |
103 |
tctatccaaatcctatagttttcgaaaacacttccggcgaaagtgtgttttctttttcaactacttttgtatttgccataagacctcaatctccaactct |
202 |
Q |
| |
|
|||||||||||| ||||||||| |||||||||| | |||||||| ||||| |||||||||||||||||| |||||| | | | |||| || | |
|
|
| T |
22831369 |
tctatccaaatcatatagtttttaaaaacacttcgaatgcaagtgtgtcatctttctcaactacttttgtatttaccataaaatccatgtatccatctat |
22831270 |
T |
|
| Q |
203 |
tggtggccatggaattgtttttgttatttctcctacaaaagggctaccaaattcactatcaacacaataccttggtctctttaacaattccaacaatgga |
302 |
Q |
| |
|
| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| |||||| |||||||||||||| | ||||||| |||| |
|
|
| T |
22831269 |
tagtggccatggaattgtttttgttctttctcctacaaaagggctaccaaattcactaccaaatcaatactttggtctctttaactactccaacattgga |
22831170 |
T |
|
| Q |
303 |
aacagtagcaaccatgtttttggtgttgagcttgacactgttcaagattttgagtttgatgatat |
367 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| | || ||||||||||||||||||| |
|
|
| T |
22831169 |
aacagtagcaaccatgtttttggtgttgagcttgacactcgtaaaaattttgagtttgatgatat |
22831105 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 1 - 367
Target Start/End: Complemental strand, 22881004 - 22880638
Alignment:
| Q |
1 |
gattccaatcatcacatttatatcttgatggtattgctgagttaacctcaaatggcttactaagactcactagtgatacagatcatgaaatagggcatgc |
100 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||| || ||| |||||||||||||||||||||||| | ||| ||||| | | ||| |||| |
|
|
| T |
22881004 |
gattccattcatcacatttatatcttgatggtattgctaaggtaaactcaaatggcttactaagactcaccaatgacacagaaagagccaaaggatatgc |
22880905 |
T |
|
| Q |
101 |
tttctatccaaatcctatagttttcgaaaacacttccggcgaaagtgtgttttctttttcaactacttttgtatttgccataagacctcaatctccaact |
200 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||| |||||||||| |||||| ||||||||||||||||||||||| | | || | | || || |
|
|
| T |
22880904 |
tttctatccaaatcctatagttttcaaaaacacttccaatgaaagtgtgtattctttctcaactacttttgtatttgccatcaaatctaggtatacagct |
22880805 |
T |
|
| Q |
201 |
cttggtggccatggaattgtttttgttatttctcctacaaaagggctaccaaattcactatcaacacaataccttggtctctttaacaattccaacaatg |
300 |
Q |
| |
|
| ||||||||||| ||||||||||| |||| || |||||||||||||||||||| ||| ||| ||||||||||||||||| ||| || ||||| || |
|
|
| T |
22880804 |
acttgtggccatggacttgtttttgttgtttcaccaacaaaagggctaccaaattcgctaccaagtaaataccttggtctctttgacactttcaacactg |
22880705 |
T |
|
| Q |
301 |
gaaacagtagcaaccatgtttttggtgttgagcttgacactgttcaagattttgagtttgatgatat |
367 |
Q |
| |
|
|||||| ||||||||||||||||| ||||||| |||||||||||||||||||||||||||| ||||| |
|
|
| T |
22880704 |
gaaacattagcaaccatgtttttgctgttgagtttgacactgttcaagattttgagtttgacgatat |
22880638 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 3 - 367
Target Start/End: Complemental strand, 22894382 - 22894018
Alignment:
| Q |
3 |
ttccaatcatcacatttatatcttgatggtattgctgagttaacctcaaatggcttactaagactcactagtgatacagatcatgaaatagggcatgctt |
102 |
Q |
| |
|
||||||||||| ||||| |||||||||||||||||| | |||||||| |||||||||||||||||||| | ||| || | || |||| || ||||||| |
|
|
| T |
22894382 |
ttccaatcatctcatttgtatcttgatggtattgctaatttaacctccaatggcttactaagactcaccaatgacaccaaacaagaaaaagcacatgctt |
22894283 |
T |
|
| Q |
103 |
tctatccaaatcctatagttttcgaaaacacttccggcgaaagtgtgttttctttttcaactacttttgtatttgccataagacctcaatctccaactct |
202 |
Q |
| |
|
|||||||||| ||||||||||| | ||||||||| | |||||| | ||| || |||||||||||||||||||||||||||| |||| ||||||| |
|
|
| T |
22894282 |
tctatccaaaccctatagttttgaagaacacttccaatggaagtgtttcttcattctcaactacttttgtatttgccataagacatcaaggtccaactta |
22894183 |
T |
|
| Q |
203 |
tggtggccatggaattgtttttgttatttctcctacaaaagggctaccaaattcactatcaacacaataccttggtctctttaacaattccaacaatgga |
302 |
Q |
| |
|
| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| | |||||||||||||||| || |||||||||||||| |
|
|
| T |
22894182 |
tagtggccatggaattgtttttgttctttctcctacaaaagggctaccaaattcactccaaggttcataccttggtctctttgacgattccaacaatgga |
22894083 |
T |
|
| Q |
303 |
aacagtagcaaccatgtttttggtgttgagcttgacactgttcaagattttgagtttgatgatat |
367 |
Q |
| |
|
|| ||||||||| |||||||||||||| ||||| ||| || || || ||||||||||||||| |
|
|
| T |
22894082 |
aatcctagcaaccacgtttttggtgttgaacttgatactattgaaaatcgtgagtttgatgatat |
22894018 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 97 - 364
Target Start/End: Complemental strand, 22885934 - 22885671
Alignment:
| Q |
97 |
atgctttctatccaaatcctatagttttcgaaaacacttccggcgaaagtgtgttttctttttcaactacttttgtatttgccataagacctcaatctcc |
196 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||| | | |||||||||| |||||| ||||||| || | ||||||| |||| | || ||| ||| |
|
|
| T |
22885934 |
atgctttctatccaaatcctatagttttcaaaaacact--cagtgaaagtgtgtcttctttctcaactaattctttatttgctataaaatcttaatatcc |
22885837 |
T |
|
| Q |
197 |
aactcttggtggccatggaattgtttttgttatttctcctacaaaagggctaccaaattcactatcaaca-caataccttggtctctttaacaattccaa |
295 |
Q |
| |
|
||||| | |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| | |||||||||||||| |||||||||||| |
|
|
| T |
22885836 |
aactcatagtggccatggaattgtttttgttatttcacctacaaaagggctaccaaattcacta-caatattaataccttggtctc--taacaattccaa |
22885740 |
T |
|
| Q |
296 |
caatggaaacagtagcaaccatgtttttggtgttgagcttgacactgttcaagattttgagtttgatga |
364 |
Q |
| |
|
||||||||||||||||| ||||||||||||| ||||||||||||||| |||| |||||||||||||||| |
|
|
| T |
22885739 |
caatggaaacagtagcagccatgtttttggtattgagcttgacactgatcaaaattttgagtttgatga |
22885671 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 1 - 329
Target Start/End: Complemental strand, 22842604 - 22842264
Alignment:
| Q |
1 |
gattccaatcatcacatttatatcttgatggtattgctgagttaacctcaaatggcttactaagactcactagtgatacagatcatgaaatagggcatgc |
100 |
Q |
| |
|
|||||||||||| ||||| |||||||||||||||||||||||||||||| |||||||| ||||||||| | ||||||| | || | | ||| ||||| |
|
|
| T |
22842604 |
gattccaatcatttcatttgtatcttgatggtattgctgagttaacctcaggtggcttaccaagactcaccaatgatacaaaacaatacaaaggtcatgc |
22842505 |
T |
|
| Q |
101 |
tttctatccaaatcctatagttttcgaaaacacttccggcgaaagtgtgttttctttttcaactacttttgtatttgccataagacctcaatctcc---- |
196 |
Q |
| |
|
||| |||||||| || ||||||||| |||||||||| | |||||||||| |||||| |||||||||||| |||||||||||| | ||| | ||| |
|
|
| T |
22842504 |
tttatatccaaaaccaatagttttcaaaaacacttctagtgaaagtgtgtcttctttctcaactacttttttatttgccataaaatctccagatccagaa |
22842405 |
T |
|
| Q |
197 |
--aactcttggtggccatggaattgttt--ttgtt----atttctcctacaaaagggctaccaaattcactatcaacacaataccttggtctctttaaca |
288 |
Q |
| |
|
||||||| ||||||| || ||||||| ||||| |||| ||||||||||||| ||||||||||||| || |||||||||||||||||||||| |
|
|
| T |
22842404 |
ctaactcttagtggccacgggattgttttgttgtttcaactttcacctacaaaagggcaaccaaattcactaccaggtcaataccttggtctctttaaca |
22842305 |
T |
|
| Q |
289 |
attccaacaatggaaacagtagcaaccatgtttttggtgtt |
329 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
22842304 |
attccaacaatggaaatagtagcaaccatgtttttggtgtt |
22842264 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 22858859 - 22858677
Alignment:
| Q |
1 |
gattccaatcatcacatttatatcttgatggtattgctgagttaacctcaaatggcttactaagactcactagtgatacagatcatgaaatagggcatgc |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| | ||||| | || || | || ||||| |
|
|
| T |
22858859 |
gattccaatcatcacatttatatcttgatggtattgctgagttaacttcaactggcttactaagactcaccaatgatatcgggcaagatacagcacatgc |
22858760 |
T |
|
| Q |
101 |
tttctatccaaatcctatagttttcgaaaacacttccggcgaaagtgtgttttctttttcaactacttttgtatttgccataa |
183 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||| | |||| ||||| |||||| |||||||||||| |||||||||||| |
|
|
| T |
22858759 |
tttctatccaaatcctatagttttcaaaaacacttctagtgaaactgtgtcttctttctcaactacttttttatttgccataa |
22858677 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 7 - 337
Target Start/End: Complemental strand, 22914102 - 22913772
Alignment:
| Q |
7 |
aatcatcacatttatatcttgatggtattgctgagttaacctcaaatggcttactaagactcactagtgatacagatcatgaaatagggcatgctttcta |
106 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||| |||||||||||||| ||||||||| | || | |||| || || ||| || ||||||||||| |
|
|
| T |
22914102 |
aatcatcacatttatatcttgatggtgttgctgaattaacctcaaatggtttactaagattaaccaatgattcaagacaacaaaagggtcatgctttcta |
22914003 |
T |
|
| Q |
107 |
tccaaatcctatagttttcgaaaacacttccggcgaaagtgtgttttctttttcaactacttttgtatttgccataagacctcaatctccaactcttggt |
206 |
Q |
| |
|
|||||| |||||||||||| | || | | ||| | |||||| || ||||||||||| |||||||||| | || | | ||| | |||| || |
|
|
| T |
22914002 |
tccaaaccctatagttttcaacaatggaagtagtagtaatgtatcttctttctctactacttttgtttttgccataaaatctgagtttcctaatcttagt |
22913903 |
T |
|
| Q |
207 |
ggccatggaattgtttttgttatttctcctacaaaagggctaccaaattcactatcaacacaataccttggtctctttaacaattccaacaatggaaaca |
306 |
Q |
| |
|
||||||||||||||||||||| ||||||| ||||||||| |||||||||||||| ||| |||||||||||||| || || | || ||||||||||||| |
|
|
| T |
22913902 |
ggccatggaattgtttttgttctttctccaacaaaagggttaccaaattcactaccaagtcaataccttggtctattcaatgaatcaaacaatggaaaca |
22913803 |
T |
|
| Q |
307 |
gtagcaaccatgtttttggtgttgagcttga |
337 |
Q |
| |
|
| ||||||||||||||| | |||||||| |
|
|
| T |
22913802 |
acaataaccatgtttttggtttggagcttga |
22913772 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 238 - 367
Target Start/End: Complemental strand, 22858665 - 22858536
Alignment:
| Q |
238 |
caaaagggctaccaaattcactatcaacacaataccttggtctctttaacaattccaacaatggaaacagtagcaaccatgtttttggtgttgagcttga |
337 |
Q |
| |
|
|||||||||||||| ||||||| ||| ||||||||||||| ||||||| ||||||||| |||||||| |||||||||||| |||| |||||||||||| |
|
|
| T |
22858665 |
caaaagggctaccagattcacttccaaaccaataccttggtccctttaacgattccaacattggaaacactagcaaccatgtgtttgctgttgagcttga |
22858566 |
T |
|
| Q |
338 |
cactgttcaagattttgagtttgatgatat |
367 |
Q |
| |
|
|||| |||||||| |||||||||||||||| |
|
|
| T |
22858565 |
cactattcaagatcttgagtttgatgatat |
22858536 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 312 - 367
Target Start/End: Complemental strand, 22922291 - 22922236
Alignment:
| Q |
312 |
aaccatgtttttggtgttgagcttgacactgttcaagattttgagtttgatgatat |
367 |
Q |
| |
|
|||||| |||||| ||||||| ||||||||||||||||||||||||||| |||||| |
|
|
| T |
22922291 |
aaccatctttttgctgttgagtttgacactgttcaagattttgagtttggtgatat |
22922236 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 312 - 367
Target Start/End: Original strand, 22933300 - 22933355
Alignment:
| Q |
312 |
aaccatgtttttggtgttgagcttgacactgttcaagattttgagtttgatgatat |
367 |
Q |
| |
|
|||||| |||||| ||| ||| ||||||||| |||||| ||||||||||||||||| |
|
|
| T |
22933300 |
aaccatatttttgctgtcgagtttgacactgctcaagactttgagtttgatgatat |
22933355 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 22885967 - 22885937
Alignment:
| Q |
1 |
gattccaatcatcacatttatatcttgatgg |
31 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
22885967 |
gattccaatcatcacatttatatcttgatgg |
22885937 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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