View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF11266_low_21 (Length: 308)
Name: NF11266_low_21
Description: NF11266
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11266_low_21 |
 | |
|
| [»] scaffold0015 (1 HSPs) |
| | |
|
| [»] scaffold0070 (1 HSPs) |
| | |
|
Alignment Details
Target: chr6 (Bit Score: 263; Significance: 1e-146; HSPs: 3)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 16 - 298
Target Start/End: Complemental strand, 1031308 - 1031026
Alignment:
| Q |
16 |
caaattcattgttaagttacatcaacacaaattcattaaaattcaacgatacggacacaaattcggaaaacattacactattacacgttaataaatatta |
115 |
Q |
| |
|
||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1031308 |
caaattcatcgttaaattacatcaacacaaattcattaaaattcaacgatacggacacaaattcggaaaacattacactattacacgttaataaatatta |
1031209 |
T |
|
| Q |
116 |
cacttcaacgcatcggacataaagatgtaaaaggttattttcaaccatcacgcgaaacatgtaatcaacgtcgctatcatctttgactagttgtggaaaa |
215 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
1031208 |
cacttcaacgcatcggacataaagatgtaaaaggttattttcaaccatcacgcgaaacatgtaatcaacgtcactatcatctttgactagttgtggaaaa |
1031109 |
T |
|
| Q |
216 |
tacacggtcttttaacggtcctcttccttatcctcccccaagtccacgcctggaacttgtactactacataatatgttctgtg |
298 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| |
|
|
| T |
1031108 |
tacacggtcttttaacggtcctcttccttatcctcccccaagtccacacctggaacttgtactactacataatatgttatgtg |
1031026 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 37 - 196
Target Start/End: Original strand, 7648021 - 7648174
Alignment:
| Q |
37 |
tcaacacaaattcattaaaattcaacgatacggacacaaattcggaaaacattacactattacacgttaataaatattacacttcaacgcatcggacata |
136 |
Q |
| |
|
||||||||||||||||||||| |||| ||| ||||||||| | || |||||||||||| |||||||||||||||||||||| | | || ||| |
|
|
| T |
7648021 |
tcaacacaaattcattaaaatgcaacatcacgaacacaaatttg-aacacattacactat-----gttaataaatattacacttcaatggagcgaacacg |
7648114 |
T |
|
| Q |
137 |
aagatgtaaaaggttattttcaaccatcacgcgaaacatgtaatcaacgtcgctatcatc |
196 |
Q |
| |
|
|| || ||||| ||||||||||| ||| | | |||||||||||||||||||| |||||| |
|
|
| T |
7648115 |
aatatataaaatgttattttcaagcattaacctaaacatgtaatcaacgtcgccatcatc |
7648174 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 226
Target Start/End: Complemental strand, 8356821 - 8356689
Alignment:
| Q |
94 |
tattacacgttaataaatattacacttcaacgcatcggacataaagatgtaaaaggttattttcaaccatcacgcgaaacatgtaatcaacgtcgctatc |
193 |
Q |
| |
|
||||||||| |||| |||||||||||||| | | |||||| ||| |||||| | |||||| ||||||||| | |||||||||||| || |||| ||| |
|
|
| T |
8356821 |
tattacacgccaatacatattacacttcaatggagcggacacaaatatgtaagatattatttccaaccatcaacctaaacatgtaatctacatcgccatc |
8356722 |
T |
|
| Q |
194 |
atctttgactagttgtggaaaatacacggtctt |
226 |
Q |
| |
|
||| | || | || ||||||||| |||||||| |
|
|
| T |
8356721 |
atcatggataacttttggaaaataaacggtctt |
8356689 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 239; Significance: 1e-132; HSPs: 12)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 16 - 298
Target Start/End: Original strand, 35049252 - 35049534
Alignment:
| Q |
16 |
caaattcattgttaagttacatcaacacaaattcattaaaattcaacgatacggacacaaattcggaaaacattacactattacacgttaataaatatta |
115 |
Q |
| |
|
||||||||| ||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
35049252 |
caaattcatcgttaaattacatcaacacaaattcattaaaattcaacaatacggacacaaattcggaaaacattacactattacacattaataaatatta |
35049351 |
T |
|
| Q |
116 |
cacttcaacgcatcggacataaagatgtaaaaggttattttcaaccatcacgcgaaacatgtaatcaacgtcgctatcatctttgactagttgtggaaaa |
215 |
Q |
| |
|
|||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
35049352 |
cacttcaacggatcggacataaagatgtaaaagattattttcaaccatcacgcgaaacatgtaatcaacgtcactatcatctttgactagttgtggaaaa |
35049451 |
T |
|
| Q |
216 |
tacacggtcttttaacggtcctcttccttatcctcccccaagtccacgcctggaacttgtactactacataatatgttctgtg |
298 |
Q |
| |
|
||| ||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35049452 |
tacgcggtcttccaacggtcctcttccttatcctcccacaagtccacgcctggaacttgtactactacataatatgttctgtg |
35049534 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 16 - 298
Target Start/End: Complemental strand, 38740155 - 38739873
Alignment:
| Q |
16 |
caaattcattgttaagttacatcaacacaaattcattaaaattcaacgatacggacacaaattcggaaaacattacactattacacgttaataaatatta |
115 |
Q |
| |
|
||||||||| ||||| |||||| ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38740155 |
caaattcatcgttaaattacataaacacgaattcattaaaattcaacaatacggacacaaattcggaaaacattacactattacacgttaataaatatta |
38740056 |
T |
|
| Q |
116 |
cacttcaacgcatcggacataaagatgtaaaaggttattttcaaccatcacgcgaaacatgtaatcaacgtcgctatcatctttgactagttgtggaaaa |
215 |
Q |
| |
|
||||||||| |||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
38740055 |
gacttcaacggatcggacataaagatgtaaaagattattttcaaccatcacacgaaacatgtaatcaacgtcactatcatctttgactagttgtggaaaa |
38739956 |
T |
|
| Q |
216 |
tacacggtcttttaacggtcctcttccttatcctcccccaagtccacgcctggaacttgtactactacataatatgttctgtg |
298 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38739955 |
tacacggtcttccaacggtcctcttccttatcctcccccaagtccacgcctggaacttgtactactacataatatgttctgtg |
38739873 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 16 - 298
Target Start/End: Original strand, 20883447 - 20883729
Alignment:
| Q |
16 |
caaattcattgttaagttacatcaacacaaattcattaaaattcaacgatacggacacaaattcggaaaacattacactattacacgttaataaatatta |
115 |
Q |
| |
|
||||||||| ||||| ||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
20883447 |
caaattcatcgttaaattacatcaacacaaattcattaaaattcaacaatacagacacaaattcggaaaacattacgctattacacgttaataaatatta |
20883546 |
T |
|
| Q |
116 |
cacttcaacgcatcggacataaagatgtaaaaggttattttcaaccatcacgcgaaacatgtaatcaacgtcgctatcatctttgactagttgtggaaaa |
215 |
Q |
| |
|
| ||||||| || ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
20883547 |
aatttcaacggattggacataaagatgtaaaaggttattttcaaccatctcgcgaaacatgtaatcaacgtcactatcatctttgactagttgtggaaaa |
20883646 |
T |
|
| Q |
216 |
tacacggtcttttaacggtcctcttccttatcctcccccaagtccacgcctggaacttgtactactacataatatgttctgtg |
298 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||| |
|
|
| T |
20883647 |
tacacggtcttccaacggtcctcttccttatcctcccccaagtccacgcctgaaacttgtactactacataatatgttatgtg |
20883729 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 16 - 267
Target Start/End: Original strand, 26506028 - 26506278
Alignment:
| Q |
16 |
caaattcattgttaagttacatcaacacaaattcattaaaattcaacgatacggacacaaattcggaaaacattacactattacacgttaataaatatta |
115 |
Q |
| |
|
||||||||| ||||| | |||| |||||||||||||||||||||||| ||||||| ||||||||| | || |||||||||||||| |||||||||||||| |
|
|
| T |
26506028 |
caaattcatcgttaaataacataaacacaaattcattaaaattcaacaatacggatacaaattcgaacaa-attacactattacatgttaataaatatta |
26506126 |
T |
|
| Q |
116 |
cacttcaacgcatcggacataaagatgtaaaaggttattttcaaccatcacgcgaaacatgtaatcaacgtcgctatcatctttgactagttgtggaaaa |
215 |
Q |
| |
|
|| ||||| |||||||||||||||||||| |||||||||||||||||||| |||||||||| |||||||||||||||||| ||| |||||||||||| |
|
|
| T |
26506127 |
catttcaaaagatcggacataaagatgtaaagtgttattttcaaccatcacgctaaacatgtaagcaacgtcgctatcatcttcgacaagttgtggaaaa |
26506226 |
T |
|
| Q |
216 |
tacacggtcttttaacggtcctcttccttatcctcccccaagtccacgcctg |
267 |
Q |
| |
|
|||||||||||| || || |||||| |||||||||| |||||||| ||||| |
|
|
| T |
26506227 |
tacacggtctttcaaaagtgctcttctttatcctccctcaagtccatgcctg |
26506278 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 16 - 264
Target Start/End: Complemental strand, 17344517 - 17344270
Alignment:
| Q |
16 |
caaattcattgttaagttacatcaacacaaattcattaaaattcaacgatacggacacaaattcggaaaacattacactattacacgttaataaatatta |
115 |
Q |
| |
|
||||||||| ||||| ||| || | |||||||||||||||||||||| |||| |||||||||||| | || ||||| |||||||||||||||||||||| |
|
|
| T |
17344517 |
caaattcatcgttaaattatataaccacaaattcattaaaattcaacaatacagacacaaattcgaacaa-attacgatattacacgttaataaatatta |
17344419 |
T |
|
| Q |
116 |
cacttcaacgcatcggacataaagatgtaaaaggttattttcaaccatcacgcgaaacatgtaatcaacgtcgctatcatctttgactagttgtggaaaa |
215 |
Q |
| |
|
|||||||| | ||| ||| ||||||| ||| |||||||||||||||||| ||||||||||||||| ||||| ||||||||| ||| |||||||||||| |
|
|
| T |
17344418 |
cacttcaatggatcagacgtaaagattcaaagtgttattttcaaccatcacacgaaacatgtaatcagcgtcggtatcatcttcgacaagttgtggaaaa |
17344319 |
T |
|
| Q |
216 |
tacacggtcttttaacggtcctcttccttatcctcccccaagtccacgc |
264 |
Q |
| |
|
|||||||||||| || || ||||||||||||||||||||||||||||| |
|
|
| T |
17344318 |
tacacggtctttcaaaagttctcttccttatcctcccccaagtccacgc |
17344270 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 39 - 260
Target Start/End: Complemental strand, 16109621 - 16109401
Alignment:
| Q |
39 |
aacacaaattcattaaaattcaacgatacggacacaaattcggaaaacattacactattacacgttaataaatattacacttcaacgcatcggacataaa |
138 |
Q |
| |
|
|||||||||||||||||||||||| ||| |||||||||||| |||||||||||| ||||||| ||||||||||||||||||||||| ||| |||||||| |
|
|
| T |
16109621 |
aacacaaattcattaaaattcaacattacagacacaaattcg-aaaacattacacaattacactttaataaatattacacttcaacggatcagacataaa |
16109523 |
T |
|
| Q |
139 |
gatgtaaaaggttattttcaaccatcacgcgaaacatgtaatcaacgtcgctatcatctttgactagttgtggaaaatacacggtcttttaacggtcctc |
238 |
Q |
| |
|
|||| |||| |||||| ||||||||||||| ||| |||||| |||| |||||||||||||||| |||| |||| ||||||||||||| || ||||| |
|
|
| T |
16109522 |
gatggaaaatgttattctcaaccatcacgctaaatatgtaagcaacatcgctatcatctttgagaagttatggataatacacggtcttccaaaaatcctc |
16109423 |
T |
|
| Q |
239 |
ttccttatcctcccccaagtcc |
260 |
Q |
| |
|
|||||||||||||| ||||||| |
|
|
| T |
16109422 |
ttccttatcctccctcaagtcc |
16109401 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 39 - 264
Target Start/End: Complemental strand, 6374916 - 6374692
Alignment:
| Q |
39 |
aacacaaattcattaaaattcaacgatacggacacaaattcggaaaacattacactattacacgttaataaatattacacttcaacgcatcggacataaa |
138 |
Q |
| |
|
|||||||||| ||||||||||||| ||| |||| ||||||| || ||||||||||||||||| ||||||||||||||||||||||| ||| |||||||| |
|
|
| T |
6374916 |
aacacaaatttattaaaattcaacattactgacataaattcg-aacacattacactattacacattaataaatattacacttcaacggatcagacataaa |
6374818 |
T |
|
| Q |
139 |
gatgtaaaaggttattttcaaccatcacgcgaaacatgtaatcaacgtcgctatcatctttgactagttgtggaaaatacacggtcttttaacggtcctc |
238 |
Q |
| |
|
||||||||| ||||||| |||||| | | ||||||||||||||||||||| ||||||||||| ||||||||| |||| |||||||| || |||| |
|
|
| T |
6374817 |
gatgtaaaatattatttttaaccattaacctaaacatgtaatcaacgtcgctgtcatctttgacaagttgtggataatatacggtcttcaaaaaatccta |
6374718 |
T |
|
| Q |
239 |
ttccttatcctcccccaagtccacgc |
264 |
Q |
| |
|
|||||||||||||||||||||||||| |
|
|
| T |
6374717 |
ttccttatcctcccccaagtccacgc |
6374692 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 39 - 295
Target Start/End: Complemental strand, 33937292 - 33937037
Alignment:
| Q |
39 |
aacacaaattcattaaaattcaacgatacggacacaaattcggaaaacattacactattacacgttaataaatattacacttcaacgcatcggacataaa |
138 |
Q |
| |
|
|||||||||||||||||||||||| ||| || ||||||| | || |||||||||||||||| |||||||||||||||||||||| | || ||||||| |
|
|
| T |
33937292 |
aacacaaattcattaaaattcaacattacagagacaaatttg-aacacattacactattacatgttaataaatattacacttcaatagaccgaacataaa |
33937194 |
T |
|
| Q |
139 |
gatgtaaaaggttattttcaaccatcacgcgaaacatgtaatcaacgtcgctatcatctttgactagttgtggaaaatacacggtcttttaacggtcctc |
238 |
Q |
| |
|
|| |||||| |||||||||||||| | | |||||||||||||| ||| ||||||| || || |||||||||||||| | ||||| || |||||| |
|
|
| T |
33937193 |
gaagtaaaatattattttcaaccattaatctaaacatgtaatcaatgtcactatcattttcgataagttgtggaaaatatatcgtcttccaaaagtcctc |
33937094 |
T |
|
| Q |
239 |
ttccttatcctcccccaagtccacgcctggaacttgtactactacataatatgttct |
295 |
Q |
| |
|
||| |||||||||| |||||||||| || || ||||||||||||| | ||||||| |
|
|
| T |
33937093 |
ttctttatcctccctcaagtccacgtttgacacatgtactactacatgagatgttct |
33937037 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 39 - 163
Target Start/End: Original strand, 8736312 - 8736435
Alignment:
| Q |
39 |
aacacaaattcattaaaattcaacgatacggacacaaattcggaaaacattacactattacacgttaataaatattacacttcaacgcatcggacataaa |
138 |
Q |
| |
|
|||||||||||||||||||||||| ||| ||||||||||| || ||||||| |||||||||||||||||||||||||||| | | ||| |||||||| |
|
|
| T |
8736312 |
aacacaaattcattaaaattcaacattacaaacacaaattcg-aacgcattacattattacacgttaataaatattacacttcgatgaatcagacataaa |
8736410 |
T |
|
| Q |
139 |
gatgtaaaaggttattttcaaccat |
163 |
Q |
| |
|
|||||||| ||||||||||||||| |
|
|
| T |
8736411 |
aatgtaaaatgttattttcaaccat |
8736435 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 87 - 181
Target Start/End: Original strand, 20159592 - 20159686
Alignment:
| Q |
87 |
attacactattacacgttaataaatattacacttcaacgcatcggacataaagatgtaaaaggttattttcaaccatcacgcgaaacatgtaatc |
181 |
Q |
| |
|
|||||||||||||| || |||| ||||||||||||| | | || ||| |||||||||| | |||||||||||||||| | |||||||||||| |
|
|
| T |
20159592 |
attacactattacatgtcaatacgtattacacttcaatggagcgcacacaaagatgtaacatattattttcaaccatcaatctaaacatgtaatc |
20159686 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 110 - 196
Target Start/End: Complemental strand, 28197020 - 28196934
Alignment:
| Q |
110 |
atattacacttcaacgcatcggacataaagatgtaaaaggttattttcaaccatcacgcgaaacatgtaatcaacgtcgctatcatc |
196 |
Q |
| |
|
|||||||||||||| | ||| |||| ||| |||||||| ||||||||||||||| | | ||||| ||||||||||| || |||||| |
|
|
| T |
28197020 |
atattacacttcaatggatcagacacaaatatgtaaaatgttattttcaaccattaacctaaacacgtaatcaacgttgccatcatc |
28196934 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 80
Target Start/End: Complemental strand, 16109697 - 16109656
Alignment:
| Q |
39 |
aacacaaattcattaaaattcaacgatacggacacaaattcg |
80 |
Q |
| |
|
|||||||||||||||||||||||| ||| |||||||||||| |
|
|
| T |
16109697 |
aacacaaattcattaaaattcaacattacagacacaaattcg |
16109656 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 227; Significance: 1e-125; HSPs: 7)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 16 - 298
Target Start/End: Complemental strand, 19379795 - 19379513
Alignment:
| Q |
16 |
caaattcattgttaagttacatcaacacaaattcattaaaattcaacgatacggacacaaattcggaaaacattacactattacacgttaataaatatta |
115 |
Q |
| |
|
||||||||| ||||| ||||||||||||||||||||||||||||||| |||| ||||||||||||||||| |||||||||||||||||||| |||| ||| |
|
|
| T |
19379795 |
caaattcatcgttaaattacatcaacacaaattcattaaaattcaacaatacagacacaaattcggaaaatattacactattacacgttaaaaaatgtta |
19379696 |
T |
|
| Q |
116 |
cacttcaacgcatcggacataaagatgtaaaaggttattttcaaccatcacgcgaaacatgtaatcaacgtcgctatcatctttgactagttgtggaaaa |
215 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
19379695 |
cacttcaacggatcggacataaagatgtaaaaggttattttcaagcatcacgcgaaacatgtaatcaacgtcactatcatctttgactagttgtggaaaa |
19379596 |
T |
|
| Q |
216 |
tacacggtcttttaacggtcctcttccttatcctcccccaagtccacgcctggaacttgtactactacataatatgttctgtg |
298 |
Q |
| |
|
||||||||||| ||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19379595 |
tacacggtcttccaacggtcatcttccttatcctcccccaagcccacgcctggaacttgtactactacataatatgttctgtg |
19379513 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 64 - 295
Target Start/End: Complemental strand, 35004392 - 35004162
Alignment:
| Q |
64 |
atacggacacaaattcggaaaacattacactattacacgttaataaatattacacttcaacgcatcggacataaagatgtaaaaggttattttcaaccat |
163 |
Q |
| |
|
||||||||||||||||| | || ||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| || |||||| |||||||| |
|
|
| T |
35004392 |
atacggacacaaattcgaataa-attacgatattacacgttaataaatattacacttcaacagatcggacataaagatgtagaatgttattctcaaccat |
35004294 |
T |
|
| Q |
164 |
cacgcgaaacatgtaatcaacgtcgctatcatctttgactagttgtggaaaatacacggtcttttaacggtcctcttccttatcctcccccaagtccacg |
263 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||| ||||||| ||||||||||||||| || ||| |||||||||||||||||||||||||| |
|
|
| T |
35004293 |
cacgcgaaacatgtaatcaacgtcgctatcatatttgacaagttgtgaaaaatacacggtcttccaaaagtcttcttccttatcctcccccaagtccact |
35004194 |
T |
|
| Q |
264 |
cctggaacttgtactactacataatatgttct |
295 |
Q |
| |
|
||||| |||||||||||||||||| ||||||| |
|
|
| T |
35004193 |
cctggcacttgtactactacataacatgttct |
35004162 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 16 - 267
Target Start/End: Original strand, 9827155 - 9827406
Alignment:
| Q |
16 |
caaattcattgttaagttacatcaacacaaattcattaaaattcaacgatacggacacaaattcggaaaacattacactattacacgttaataaatatta |
115 |
Q |
| |
|
||||||||| ||||| |||||| | |||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||| | ||| ||||||| |
|
|
| T |
9827155 |
caaattcatcgttaaattacataagcacaaattcattaaaattcaacaatacatacacaaattcggaaaacattacactattacacttaaattaatatta |
9827254 |
T |
|
| Q |
116 |
cacttcaacgcatcggacataaagatgtaaaaggttattttcaaccatcacgcgaaacatgtaatcaacgtcgctatcatctttgactagttgtggaaaa |
215 |
Q |
| |
|
|||||||||| |||||||| |||||| ||| |||||| |||||||| | | |||||||||||||||||||||||||||||||| |||||| || || |
|
|
| T |
9827255 |
cacttcaacggatcggacaaaaagatacaaagtgttattctcaaccattaacctaaacatgtaatcaacgtcgctatcatctttgagaagttgttgataa |
9827354 |
T |
|
| Q |
216 |
tacacggtcttttaacggtcctcttccttatcctcccccaagtccacgcctg |
267 |
Q |
| |
|
||||| ||||| | ||| ||||||||||||| ||||||||||||||||| |
|
|
| T |
9827355 |
tacacagtcttccagaagtcttcttccttatcctgccccaagtccacgcctg |
9827406 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 16 - 267
Target Start/End: Original strand, 26224610 - 26224861
Alignment:
| Q |
16 |
caaattcattgttaagttacatcaacacaaattcattaaaattcaacgatacggacacaaattcggaaaacattacactattacacgttaataaatatta |
115 |
Q |
| |
|
||||||||||||||| |||||| |||||||||||||||||||||||| |||| ||||||||||| ||||| |||||||| |||||| | || ||||| || |
|
|
| T |
26224610 |
caaattcattgttaaattacataaacacaaattcattaaaattcaacaatacagacacaaattcagaaaatattacactgttacacttaaacaaatacta |
26224709 |
T |
|
| Q |
116 |
cacttcaacgcatcggacataaagatgtaaaaggttattttcaaccatcacgcgaaacatgtaatcaacgtcgctatcatctttgactagttgtggaaaa |
215 |
Q |
| |
|
|||||||||| |||||||| |||||| ||| || ||| |||||||| | | |||||||||||||||||| |||||||||| ||| |||| | ||||| |
|
|
| T |
26224710 |
cacttcaacggatcggacaaaaagatacaaagtgtaattctcaaccatgaacctaaacatgtaatcaacgtcactatcatcttcgacaagttctagaaaa |
26224809 |
T |
|
| Q |
216 |
tacacggtcttttaacggtcctcttccttatcctcccccaagtccacgcctg |
267 |
Q |
| |
|
|||| |||||| || |||||||||||||||||| |||||||||||||||| |
|
|
| T |
26224810 |
tacaaggtcttccaaaagtcctcttccttatcctctcccaagtccacgcctg |
26224861 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 32 - 287
Target Start/End: Original strand, 22728314 - 22728568
Alignment:
| Q |
32 |
ttacatcaacacaaattcattaaaattcaacgatacggacacaaattcggaaaacattacactattacacgttaataaatattacacttcaacgcatcgg |
131 |
Q |
| |
|
|||||| |||||| || ||||||||||||| ||||| ||||||||||| | || || ||| |||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
22728314 |
ttacataaacacatatccattaaaattcaaaaatacgaacacaaattcgaacaaaat-acaatattacacgttaataaatattacacttcaacggatcgg |
22728412 |
T |
|
| Q |
132 |
acataaagatgtaaaaggttattttcaaccatcacgcgaaacatgtaatcaacgtcgctatcatctttgactagttgtggaaaatacacggtcttttaac |
231 |
Q |
| |
|
|||||||||||||||| ||||||||||| || | || ||||||| |||||| | |||||||||||||| ||| ||||||||||||| ||||| || |
|
|
| T |
22728413 |
acataaagatgtaaaatgttattttcaataattaggctaaacatgacatcaacattgctatcatctttgagaagtagtggaaaatacacagtcttccaaa |
22728512 |
T |
|
| Q |
232 |
ggtcctcttccttatcctcccccaagtccacgcctggaacttgtactactacataa |
287 |
Q |
| |
|
|||||||||||| |||||||||||||||||| ||| |||||||| || |||||| |
|
|
| T |
22728513 |
agtcctcttccttctcctcccccaagtccacggttggcacttgtacaacgacataa |
22728568 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 39 - 266
Target Start/End: Complemental strand, 28759053 - 28758827
Alignment:
| Q |
39 |
aacacaaattcattaaaattcaacgatacggacacaaattcggaaaacattacactattacacgttaataaatattacacttcaacgcatcggacataaa |
138 |
Q |
| |
|
|||||||||||||| ||||||| | || |||||||||||| || |||||| ||||||||||||| || ||||||||||||||||| ||| |||||||| |
|
|
| T |
28759053 |
aacacaaattcatttaaattcatcactatagacacaaattcg-aacacattatactattacacgttcattaatattacacttcaacggatcagacataaa |
28758955 |
T |
|
| Q |
139 |
gatgtaaaaggttattttcaaccatcacgcgaaacatgtaatcaacgtcgctatcatctttgactagttgtggaaaatacacggtcttttaacggtcctc |
238 |
Q |
| |
|
|||||||| ||||| |||||||| | |||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| | || || |
|
|
| T |
28758954 |
gatgtaaagtgttatcctcaaccatttacctaaacatgtaatcaacgtcgctatcatctttgagaagttgtggataatacacggtctttcagaagtattc |
28758855 |
T |
|
| Q |
239 |
ttccttatcctcccccaagtccacgcct |
266 |
Q |
| |
|
|| |||||||||||||||| ||||||| |
|
|
| T |
28758854 |
atcattatcctcccccaagtacacgcct |
28758827 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 87 - 165
Target Start/End: Complemental strand, 19507319 - 19507241
Alignment:
| Q |
87 |
attacactattacacgttaataaatattacacttcaacgcatcggacataaagatgtaaaaggttattttcaaccatca |
165 |
Q |
| |
|
|||||||| |||| ||| |||| |||||||||||||||| |||||||||| ||||| | |||||||||||||||| |
|
|
| T |
19507319 |
attacactcttactcgtcaatacatattacacttcaacggggcggacataaatatgtaggatattattttcaaccatca |
19507241 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 225; Significance: 1e-124; HSPs: 12)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 26 - 298
Target Start/End: Complemental strand, 44226035 - 44225768
Alignment:
| Q |
26 |
gttaagttacatcaacacaaattcattaaaattcaacgatacggacacaaattcggaaaacattacactattacacgttaataaatattacacttcaacg |
125 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| |
|
|
| T |
44226035 |
gttaaattacatcaacacaaattcattaaaattcaacaatacggacacaaattcggaaaacattacacaa-----cgttaataaatattacacttcaacg |
44225941 |
T |
|
| Q |
126 |
catcggacataaagatgtaaaaggttattttcaaccatcacgcgaaacatgtaatcaacgtcgctatcatctttgactagttgtggaaaatacacggtct |
225 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
44225940 |
gatcggacataaagatgtaaaaggttattttcaaccatcacgcgaaacatgtaatcaacgtcactatcatctttgactagttgtggaaaatacacggtct |
44225841 |
T |
|
| Q |
226 |
tttaacggtcctcttccttatcctcccccaagtccacgcctggaacttgtactactacataatatgttctgtg |
298 |
Q |
| |
|
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
44225840 |
tccaacggtcctcttccttatcctcccccaagtccacgcctggaacttgtactactacataatatgttctgtg |
44225768 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 39 - 198
Target Start/End: Original strand, 29248731 - 29248888
Alignment:
| Q |
39 |
aacacaaattcattaaaattcaacgatacggacacaaattcggaaaacattacactattacacgttaataaatattacacttcaacgcatcggacataaa |
138 |
Q |
| |
|
|||||||||||||| ||||||||| |||||||||||||| | |||||||||||||||||||||| |||||||||||||||||| | ||| |||||||| |
|
|
| T |
29248731 |
aacacaaattcatttaaattcaacattacggacacaaattgg--aaacattacactattacacgttcataaatattacacttcaatggatcagacataaa |
29248828 |
T |
|
| Q |
139 |
gatgtaaaaggttattttcaaccatcacgcgaaacatgtaatcaacgtcgctatcatctt |
198 |
Q |
| |
|
|||| |||| ||||||||||||||| | |||||||||| ||||||| |||||||||| |
|
|
| T |
29248829 |
gatgcaaaatgttattttcaaccattaaattaaacatgtaaccaacgtctctatcatctt |
29248888 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 104 - 181
Target Start/End: Original strand, 10526761 - 10526838
Alignment:
| Q |
104 |
taataaatattacacttcaacgcatcggacataaagatgtaaaaggttattttcaaccatcacgcgaaacatgtaatc |
181 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10526761 |
taataaatattacacttcaacgaatcggacataaagaagtaaaaggttattttcaaccatcacgcgaaacatgtaatc |
10526838 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 112 - 257
Target Start/End: Complemental strand, 23943219 - 23943074
Alignment:
| Q |
112 |
attacacttcaacgcatcggacataaagatgtaaaaggttattttcaaccatcacgcgaaacatgtaatcaacgtcgctatcatctttgactagttgtgg |
211 |
Q |
| |
|
|||||||||||||| |||||||| |||||| ||| |||||| |||||||| || | ||||||| ||||||| |||||||||||||||| |||||||| |
|
|
| T |
23943219 |
attacacttcaacggatcggacaaaaagatacaaattgttattctcaaccattaccctaaacatgaaatcaacctcgctatcatctttgagaagttgtgg |
23943120 |
T |
|
| Q |
212 |
aaaatacacggtcttttaacggtcctcttccttatcctcccccaag |
257 |
Q |
| |
|
| ||||||||||||| | ||||||||||||||||||||||||| |
|
|
| T |
23943119 |
ataatacacggtcttccagaagtcctcttccttatcctcccccaag |
23943074 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 187 - 295
Target Start/End: Complemental strand, 24503931 - 24503823
Alignment:
| Q |
187 |
cgctatcatctttgactagttgtggaaaatacacggtcttttaacggtcctcttccttatcctcccccaagtccacgcctggaacttgtactactacata |
286 |
Q |
| |
|
||||||||||||||| |||||||||||||| ||||||||| || ||||||||||||||||||||||||||||||| ||| || | ||||| ||||| |
|
|
| T |
24503931 |
cgctatcatctttgagaagttgtggaaaatatacggtctttcaaaattcctcttccttatcctcccccaagtccacgcttggcacatctactattacatc |
24503832 |
T |
|
| Q |
287 |
atatgttct |
295 |
Q |
| |
|
| ||||||| |
|
|
| T |
24503831 |
acatgttct |
24503823 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 39 - 112
Target Start/End: Complemental strand, 26154130 - 26154058
Alignment:
| Q |
39 |
aacacaaattcattaaaattcaacgatacggacacaaattcggaaaacattacactattacacgttaataaata |
112 |
Q |
| |
|
||||||||||||||||||||||||| || ||||||||||| ||| |||||||| ||||||||||||||||||| |
|
|
| T |
26154130 |
aacacaaattcattaaaattcaacgttagagacacaaattc-gaacacattacattattacacgttaataaata |
26154058 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 26 - 94
Target Start/End: Complemental strand, 23943280 - 23943212
Alignment:
| Q |
26 |
gttaagttacatcaacacaaattcattaaaattcaacgatacggacacaaattcggaaaacattacact |
94 |
Q |
| |
|
||||| |||||| |||||||||||||||||||||||| |||| ||||||||| ||||||||||||||| |
|
|
| T |
23943280 |
gttaaattacataaacacaaattcattaaaattcaacaatacatacacaaatttggaaaacattacact |
23943212 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 174 - 261
Target Start/End: Complemental strand, 26153643 - 26153556
Alignment:
| Q |
174 |
atgtaatcaacgtcgctatcatctttgactagttgtggaaaatacacggtcttttaacggtcctcttccttatcctcccccaagtcca |
261 |
Q |
| |
|
|||||||||| |||||||||||||| || |||||||||||||| |||||||| || ||| ||||| ||||||||||||||||||| |
|
|
| T |
26153643 |
atgtaatcaatgtcgctatcatcttcgataagttgtggaaaatatacggtcttccaaaagtcatcttctttatcctcccccaagtcca |
26153556 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 80
Target Start/End: Original strand, 10526215 - 10526279
Alignment:
| Q |
16 |
caaattcattgttaagttacatcaacacaaattcattaaaattcaacgatacggacacaaattcg |
80 |
Q |
| |
|
||||||||| ||||| |||||| ||||||||||||||||||||||| |||| |||||||||||| |
|
|
| T |
10526215 |
caaattcatcgttaaattacataaacacaaattcattaaaattcaataatacagacacaaattcg |
10526279 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 39 - 123
Target Start/End: Complemental strand, 12869473 - 12869390
Alignment:
| Q |
39 |
aacacaaattcattaaaattcaacgatacggacacaaattcggaaaacattacactattacacgttaataaatattacacttcaa |
123 |
Q |
| |
|
|||| ||||||||||||||| | || |||||||||||| || ||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
12869473 |
aacataaattcattaaaattgattattatggacacaaattca-aacacattacactattacgcgttaataaatattacacttcaa |
12869390 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 58 - 145
Target Start/End: Original strand, 2368488 - 2368574
Alignment:
| Q |
58 |
tcaacgatacggacacaaattcggaaaacattacactattacacgttaataaatattacacttcaacgcatcggacataaagatgtaa |
145 |
Q |
| |
|
||||| ||||| ||||||||||| | || ||||| ||||||| |||||||||||||| | ||||| | |||||||||||| |||||| |
|
|
| T |
2368488 |
tcaacaatacgaacacaaattcgaacaa-attacgatattacatgttaataaatattatatttcaatggatcggacataaatatgtaa |
2368574 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 163
Target Start/End: Complemental strand, 26153912 - 26153860
Alignment:
| Q |
111 |
tattacacttcaacgcatcggacataaagatgtaaaaggttattttcaaccat |
163 |
Q |
| |
|
||||||||||||| | |||||||||||||| ||||| |||||||| |||||| |
|
|
| T |
26153912 |
tattacacttcaatggatcggacataaagagataaaatgttattttgaaccat |
26153860 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 224; Significance: 1e-123; HSPs: 8)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 16 - 298
Target Start/End: Complemental strand, 12067633 - 12067354
Alignment:
| Q |
16 |
caaattcattgttaagttacatcaacacaaattcattaaaattcaacgatacggacacaaattcggaaaacattacactattacacgttaataaatatta |
115 |
Q |
| |
|
||||||||| ||||| |||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12067633 |
caaattcatcgttaaattacatcagcacaaattcattaaaattcaacaatacggacacaaattcggaaaacattacactattacacgttaataaatatta |
12067534 |
T |
|
| Q |
116 |
cacttcaacgcatcggacataaagatgtaaaaggttattttcaaccatcacgcgaaacatgtaatcaacgtcgctatcatctttgactagttgtggaaaa |
215 |
Q |
| |
|
|||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||| |
|
|
| T |
12067533 |
cacttcaacg-atcagacataaagatgtaaaaggttattttcaaccatcacgcgaaacatgtaatcaacgtcactattatctttgactagttgtggaaaa |
12067435 |
T |
|
| Q |
216 |
tacacggtcttttaacggtcctcttccttatcctcccccaagtccacgcctggaacttgtactactacataatatgttctgtg |
298 |
Q |
| |
|
||||||||||| ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
12067434 |
tacacggtcttccaacggtcctcttccttatcct--cccaagtccacgcctggaatttgtactactacataatatgttctgtg |
12067354 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 16 - 298
Target Start/End: Original strand, 30703530 - 30703812
Alignment:
| Q |
16 |
caaattcattgttaagttacatcaacacaaattcattaaaattcaacgatacggacacaaattcggaaaacattacactattacacgttaataaatatta |
115 |
Q |
| |
|
||||||||| ||||| ||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||| ||| ||||||||||||| |
|
|
| T |
30703530 |
caaattcatcgttaaattacatcaacacaaattcattaaaattcaacaatacggacacaaattaggaaaacattacactattgcacattaataaatatta |
30703629 |
T |
|
| Q |
116 |
cacttcaacgcatcggacataaagatgtaaaaggttattttcaaccatcacgcgaaacatgtaatcaacgtcgctatcatctttgactagttgtggaaaa |
215 |
Q |
| |
|
|||||||||| ||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
30703630 |
cacttcaacggatcagacataaagatgtaaaaggttattttcaaacatcacgcgaaacatgtaatcaacgtcactatcatctttgactagttgtggaaaa |
30703729 |
T |
|
| Q |
216 |
tacacggtcttttaacggtcctcttccttatcctcccccaagtccacgcctggaacttgtactactacataatatgttctgtg |
298 |
Q |
| |
|
||||||||||| |||| ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| |
|
|
| T |
30703730 |
tacacggtcttccaacgatcctcttccttatcctcccccaagtccacgcttggaacttgtactactatataatatgttctgtg |
30703812 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 16 - 298
Target Start/End: Complemental strand, 1181084 - 1180801
Alignment:
| Q |
16 |
caaattcattgttaagttacatcaacacaaattcattaaaattcaacgatacggacacaaattcggaaaacattacactattacacgttaataaa-tatt |
114 |
Q |
| |
|
||||||||| ||||| |||||||||||||| |||||||||||||||| |||| |||||||||||| ||||||||||||||||||||||||||||| |||| |
|
|
| T |
1181084 |
caaattcatcgttaaattacatcaacacaagttcattaaaattcaacaatacagacacaaattcgaaaaacattacactattacacgttaataaaatatt |
1180985 |
T |
|
| Q |
115 |
acacttcaacgcatcggacataaagatgtaaaaggttattttcaaccatcacgcgaaacatgtaatcaacgtcgctatcatctttgactagttgtggaaa |
214 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| | ||||||||||||||||||||||| |
|
|
| T |
1180984 |
acacttcaacggatcggacataaagatgtaaaaggttattttcaacaatcacacgaaacatgtaatcaacgtcacgatcatctttgactagttgtggaat |
1180885 |
T |
|
| Q |
215 |
atacacggtcttttaacggtcctcttccttatcctcccccaagtccacgcctggaacttgtactactacataatatgttctgtg |
298 |
Q |
| |
|
|||||||||||| ||| |||||||| |||||||||||||||||||||||||||||||||||||| | |||||||||||||||| |
|
|
| T |
1180884 |
atacacggtcttccaacagtcctctttcttatcctcccccaagtccacgcctggaacttgtactaatgcataatatgttctgtg |
1180801 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 16 - 298
Target Start/End: Complemental strand, 25818745 - 25818465
Alignment:
| Q |
16 |
caaattcattgttaagttacatcaacacaaattcattaaaattcaacgatacggacacaaattcggaaaacattacactattacacgttaataaatatta |
115 |
Q |
| |
|
||||||||| ||||| |||||| ||||||||||||||||||||||| ||||||||||||||||| | || ||||| ||||| |||||||||||||| | |
|
|
| T |
25818745 |
caaattcatcgttaaattacataaacacaaattcattaaaattcaataatacggacacaaattcgaacaa-attacgatattaaacgttaataaatatca |
25818647 |
T |
|
| Q |
116 |
cacttcaacgcatcggacataaagatgtaaaaggttattttcaaccatcacgcgaaacatgtaatcaacgtcgctatcatctttgactagttgtggaaaa |
215 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25818646 |
cacttcaacggatcggacataaagatgtaaaaggttattttcaaccatcacgcgaaacatgtaatcaacgtcgctatcatctttgactagttgtggaaaa |
25818547 |
T |
|
| Q |
216 |
tacacggtcttttaacggtcctcttccttatcctcccccaagtccacgcctggaacttgtactactacataatatgttctgtg |
298 |
Q |
| |
|
||||||||||| ||||| ||||||||||||||||||||||| ||||| ||| |||||||||||||||||| |||||||||| |
|
|
| T |
25818546 |
tacacggtcttccaacggccctcttccttatcctcccccaag-ccacgactgacacttgtactactacataacatgttctgtg |
25818465 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 16 - 295
Target Start/End: Original strand, 7318226 - 7318504
Alignment:
| Q |
16 |
caaattcattgttaagttacatcaacacaaattcattaaaattcaacgatacggacacaaattcggaaaacattacactattacacgttaataaatatta |
115 |
Q |
| |
|
||||||||| ||||| |||||| ||||||||||| |||||||||||| ||||||||||||||| | | || ||||||||||||||||||||||||||||| |
|
|
| T |
7318226 |
caaattcatcgttaaattacataaacacaaattctttaaaattcaacaatacggacacaaatttgaacaa-attacactattacacgttaataaatatta |
7318324 |
T |
|
| Q |
116 |
cacttcaacgcatcggacataaagatgtaaaaggttattttcaaccatcacgcgaaacatgtaatcaacgtcgctatcatctttgactagttgtggaaaa |
215 |
Q |
| |
|
||||||||| ||| |||||||||||||||| |||||||||||||||||||| ||||| |||| |||||||||||||||||| || |||||||||||| |
|
|
| T |
7318325 |
cacttcaacatatctgacataaagatgtaaagcgttattttcaaccatcacgctaaacacgtaagcaacgtcgctatcatcttcgagaagttgtggaaaa |
7318424 |
T |
|
| Q |
216 |
tacacggtcttttaacggtcctcttccttatcctcccccaagtccacgcctggaacttgtactactacataatatgttct |
295 |
Q |
| |
|
||||| ||||| || || |||||||||||||||||| | |||||||||||| || | ||||| ||||| | ||||||| |
|
|
| T |
7318425 |
tacacagtcttccaaaagttctcttccttatcctcccctaggtccacgcctgggacatttactattacatcacatgttct |
7318504 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 32 - 268
Target Start/End: Complemental strand, 23943237 - 23943001
Alignment:
| Q |
32 |
ttacatcaacacaaattcattaaaattcaacgatacggacacaaattcggaaaacattacactattacacgttaataaatattacacttcaacgcatcgg |
131 |
Q |
| |
|
|||||| |||| ||||| ||||||||||||| ||||||||||||||||| |||||||||||||||||||| | ||||| |||||||||||||| ||||| |
|
|
| T |
23943237 |
ttacataaacaaaaatttattaaaattcaacaatacggacacaaattcgaaaaacattacactattacacttaaataatgattacacttcaacggatcgg |
23943138 |
T |
|
| Q |
132 |
acataaagatgtaaaaggttattttcaaccatcacgcgaaacatgtaatcaacgtcgctatcatctttgactagttgtggaaaatacacggtcttttaac |
231 |
Q |
| |
|
||| |||||| ||| |||||| |||||||| || | ||||||| |||||||||||||||||||||||| ||||||||| ||||||||||||| | |
|
|
| T |
23943137 |
acaaaaagatacaaagtgttattctcaaccattaccctaaacatgaaatcaacgtcgctatcatctttgagaagttgtggataatacacggtcttccaga |
23943038 |
T |
|
| Q |
232 |
ggtcctcttccttatcctcccccaagtccacgcctgg |
268 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||| |
|
|
| T |
23943037 |
agtcctcttccttatcctcccccaagtccaggcctgg |
23943001 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 39 - 226
Target Start/End: Original strand, 38810244 - 38810422
Alignment:
| Q |
39 |
aacacaaattcattaaaattcaacgatacggacacaaattcggaaaacattacactattacacgttaataaatattacacttcaacgcatcggacataaa |
138 |
Q |
| |
|
|||||||||||||||||||||||| | | | |||||||||| || |||||||||||||||| |||| | ||||||||||||||| | |||||||||||| |
|
|
| T |
38810244 |
aacacaaattcattaaaattcaacattgcaggcacaaattcg-aacacattacactattacatgttactcaatattacacttcaatggatcggacataaa |
38810342 |
T |
|
| Q |
139 |
gatgtaaaaggttattttcaaccatcacgcgaaacatgtaatcaacgtcgctatcatctttgactagttgtggaaaatacacggtctt |
226 |
Q |
| |
|
| |||||||| |||||| | | |||||||||||||| || |||||| | ||||| ||| |||||||||||||||||| |
|
|
| T |
38810343 |
g--------tgttattttgaaccattaacctaaacatgtaatcaatgttgctatcgtttttgatacgttatggaaaatacacggtctt |
38810422 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 16 - 78
Target Start/End: Original strand, 36185831 - 36185893
Alignment:
| Q |
16 |
caaattcattgttaagttacatcaacacaaattcattaaaattcaacgatacggacacaaatt |
78 |
Q |
| |
|
||||||||| ||||| |||||| | || ||||||||||||||||||| ||||||||||||||| |
|
|
| T |
36185831 |
caaattcatcgttaaattacataagcataaattcattaaaattcaacaatacggacacaaatt |
36185893 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 181; Significance: 8e-98; HSPs: 9)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 181; E-Value: 8e-98
Query Start/End: Original strand, 34 - 298
Target Start/End: Original strand, 20514131 - 20514394
Alignment:
| Q |
34 |
acatcaacacaaattcattaaaattcaacgatacggacacaaattcggaaaacattacactattacacgttaataaatattacacttcaacgcatcggac |
133 |
Q |
| |
|
|||| |||||||||||||||||||||||| |||| ||||||||||| | || ||||| |||||||||||||||||||||||||||||| | ||| ||| |
|
|
| T |
20514131 |
acataaacacaaattcattaaaattcaacaatacatacacaaattcgaacaa-attacgatattacacgttaataaatattacacttcaatggatctgac |
20514229 |
T |
|
| Q |
134 |
ataaagatgtaaaaggttattttcaaccatcacgcgaaacatgtaatcaacgtcgctatcatctttgactagttgtggaaaatacacggtcttttaacgg |
233 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| |
|
|
| T |
20514230 |
gtaaatatgtaaaaggttattttcaaccatcacgcgaaacatataatcaacgtcgctatcatctttgactagttgtggaaaaaacacggtcttccaacgg |
20514329 |
T |
|
| Q |
234 |
tcctcttccttatcctcccccaagtccacgcctggaacttgtactactacataatatgttctgtg |
298 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
20514330 |
tcctcttcattatcctcccccaagtccacgcctggtacttgtactactacataatatgttctgtg |
20514394 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 17 - 295
Target Start/End: Complemental strand, 27934407 - 27934132
Alignment:
| Q |
17 |
aaattcattgttaagttacatcaacacaaattcattaaaattcaacgatacggacacaaattcggaaaacattacactattacacgttaataaatat--t |
114 |
Q |
| |
|
|||||||| ||||| ||| || |||||||||||||||||||||||| |||| |||||||||| | || ||||||||||||||||| ||||||||||| | |
|
|
| T |
27934407 |
aaattcatcgttaaattaaataaacacaaattcattaaaattcaacaatacagacacaaatttg-aacacattacactattacacattaataaatatatt |
27934309 |
T |
|
| Q |
115 |
acacttcaacgcatcggacataaagatgtaaaaggttattttcaaccatcacgcgaaacatgtaatcaacgtcgctatcatctttgactagttgtggaaa |
214 |
Q |
| |
|
|||||||| | ||| |||||||||||||||| |||||||||||||||||||| |||||||||| |||||||||||||||||| ||| ||||||||||| |
|
|
| T |
27934308 |
acacttcacgggatcagacataaagatgtaaagtgttattttcaaccatcacgctaaacatgtaagcaacgtcgctatcatcttcgacaagttgtggaaa |
27934209 |
T |
|
| Q |
215 |
atacacggtcttttaacggtcctcttccttatcctcccccaagtccacgcctggaacttgtactactacataatatgttct |
295 |
Q |
| |
|
||| | |||||| || ||||| |||||||| |||||||| |||||||| || | ||||||||||| | ||||||| |
|
|
| T |
27934208 |
atatatggtcttccaaaagtccttttccttat----ccccaagttcacgcctgacacatttactactacatcagatgttct |
27934132 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 32 - 267
Target Start/End: Complemental strand, 53768445 - 53768210
Alignment:
| Q |
32 |
ttacatcaacacaaattcattaaaattcaacgatacggacacaaattcggaaaacattacactattacacgttaataaatattacacttcaacgcatcgg |
131 |
Q |
| |
|
|||||| |||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||| | ||||| |||||| ||||||| ||||| |
|
|
| T |
53768445 |
ttacataaacacaaattcattaaaattcaacaatacaaacacaaattcggaaaacattacactattacacttaaataatgattacagttcaacggatcgg |
53768346 |
T |
|
| Q |
132 |
acataaagatgtaaaaggttattttcaaccatcacgcgaaacatgtaatcaacgtcgctatcatctttgactagttgtggaaaatacacggtcttttaac |
231 |
Q |
| |
|
||| |||||| ||| |||||| |||||||| || | |||||| |||||||||| ||||||||||||| ||||||||| |||||| ||||| | |
|
|
| T |
53768345 |
acaaaaagatacaaagtgttattctcaaccattacccttaacatgaaatcaacgtcactatcatctttgagaagttgtggataatacaatgtcttccata |
53768246 |
T |
|
| Q |
232 |
ggtcctcttccttatcctcccccaagtccacgcctg |
267 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||| |
|
|
| T |
53768245 |
agtcctcttccttatcctcccccaagtccaggcctg |
53768210 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 40 - 199
Target Start/End: Complemental strand, 30531373 - 30531215
Alignment:
| Q |
40 |
acacaaattcattaaaattcaacgatacggacacaaattcggaaaacattacactattacacgttaataaatattacacttcaacgcatcggacataaag |
139 |
Q |
| |
|
||||||||||||||||||||||| ||| ||| |||||| || ||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| |
|
|
| T |
30531373 |
acacaaattcattaaaattcaacattacaaacataaattca-aacacattacactattacacgtaaataaatattacacttcaacggatcggacataaag |
30531275 |
T |
|
| Q |
140 |
atgtaaaaggttattttcaaccatcacgcgaaacatgtaatcaacgtcgctatcatcttt |
199 |
Q |
| |
|
|||||||| ||||||||||||||| | | ||||||||||||||| |||||||||||||| |
|
|
| T |
30531274 |
atgtaaaatgttattttcaaccattaacctaaacatgtaatcaacatcgctatcatcttt |
30531215 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 32 - 141
Target Start/End: Original strand, 30930104 - 30930213
Alignment:
| Q |
32 |
ttacatcaacacaaattcattaaaattcaacgatacggacacaaattcggaaaacattacactattacacgttaataaatattacacttcaacgcatcgg |
131 |
Q |
| |
|
|||||| |||||||||||||||||||||||| ||||| |||||||||||||||| ||||||||||||||| | ||||| |||||||||||||| ||||| |
|
|
| T |
30930104 |
ttacataaacacaaattcattaaaattcaacaatacgaacacaaattcggaaaatattacactattacacttaaataatgattacacttcaacgaatcgg |
30930203 |
T |
|
| Q |
132 |
acataaagat |
141 |
Q |
| |
|
||| |||||| |
|
|
| T |
30930204 |
acaaaaagat |
30930213 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 15 - 79
Target Start/End: Complemental strand, 54336340 - 54336276
Alignment:
| Q |
15 |
tcaaattcattgttaagttacatcaacacaaattcattaaaattcaacgatacggacacaaattc |
79 |
Q |
| |
|
|||||||||| ||||| |||||| |||||||||||||||||| ||||| |||||||||||||||| |
|
|
| T |
54336340 |
tcaaattcatcgttaaattacataaacacaaattcattaaaaatcaacaatacggacacaaattc |
54336276 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 87 - 196
Target Start/End: Original strand, 23953473 - 23953582
Alignment:
| Q |
87 |
attacactattacacgttaataaatattacacttcaacgcatcggacataaagatgtaaaaggttattttcaaccatcacgcgaaacatgtaatcaacgt |
186 |
Q |
| |
|
||||||||||||||||| |||| | |||||||||||| | | | |||| |||||||||| | |||||||||| |||| | |||||||||||| || | |
|
|
| T |
23953473 |
attacactattacacgtcaatacaaattacacttcaatggagcagacacaaagatgtaacatattattttcaatcatcgacctaaacatgtaatctacat |
23953572 |
T |
|
| Q |
187 |
cgctatcatc |
196 |
Q |
| |
|
||| |||||| |
|
|
| T |
23953573 |
cgccatcatc |
23953582 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 195
Target Start/End: Complemental strand, 9193763 - 9193679
Alignment:
| Q |
111 |
tattacacttcaacgcatcggacataaagatgtaaaaggttattttcaaccatcacgcgaaacatgtaatcaacgtcgctatcat |
195 |
Q |
| |
|
||||||||||||| | ||| || | |||||||||||| ||||||||||| || | | |||||||||||||| ||||| ||||| |
|
|
| T |
9193763 |
tattacacttcaatgtatcagatacaaagatgtaaaattttattttcaacaattaaccaaaacatgtaatcaaggtcgccatcat |
9193679 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 243 - 295
Target Start/End: Complemental strand, 30531211 - 30531159
Alignment:
| Q |
243 |
ttatcctcccccaagtccacgcctggaacttgtactactacataatatgttct |
295 |
Q |
| |
|
||||| |||||||||||||||| ||| |||||||||| ||||| | ||||||| |
|
|
| T |
30531211 |
ttatcatcccccaagtccacgcatggcacttgtactattacatgagatgttct |
30531159 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 180; Significance: 3e-97; HSPs: 9)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 15 - 268
Target Start/End: Complemental strand, 1938940 - 1938698
Alignment:
| Q |
15 |
tcaaattcattgttaagttacatcaacacaaattcattaaaattcaacgatacggacacaaattcggaaaacattacactattacacgttaataaatatt |
114 |
Q |
| |
|
|||||||||| ||||| ||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||| | ||||||||||||| |
|
|
| T |
1938940 |
tcaaattcatcgttaaattacatcaacacaaattcattaaaattcaacaatacagacacaaattcggaaaacattacactattatatgttaataaatatt |
1938841 |
T |
|
| Q |
115 |
acacttcaacgcatcggacataaagatgtaaaaggttattttcaaccatcacgcgaaacatgtaatcaacgtcgctatcatctttgactagttgtggaaa |
214 |
Q |
| |
|
||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
1938840 |
acacttcaatggatcggacataaagatgtaaaaggttattttcaaccatcacgcgaaacatgtaatcaacgtcactatcatctttgactagttgtggaaa |
1938741 |
T |
|
| Q |
215 |
atacacggtcttttaacggtcctcttccttatcctcccccaagtccacgcctgg |
268 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1938740 |
atacac-----------ggtcctcttccttatcctcccccaagtccacgcctgg |
1938698 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 16 - 298
Target Start/End: Original strand, 50334542 - 50334816
Alignment:
| Q |
16 |
caaattcattgttaagttacatcaacacaaattcattaaaattcaacgatacggacacaaattcggaaaacattacactattac------acgttaataa |
109 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||||||||||| |||| |||||||||||| |||||||||||||||||| || ||||||| |
|
|
| T |
50334542 |
caaattcattgttaaattacatcaacacaaattcattaaaattcaacaatacagacacaaattcgaaaaacattacactattactattacacattaataa |
50334641 |
T |
|
| Q |
110 |
atattacacttcaacgcatcggacataaagatgtaaaaggttattttcaaccatcacgcgaaacatgtaatcaacgtcgctatcatctttgactagttgt |
209 |
Q |
| |
|
|||| |||||||||| ||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
50334642 |
atataacacttcaacagatcagacataaagatgtaaaaagttattttcaaccatcacgcgaaacatgtaatcaacgtcactatcatctttgactagttgt |
50334741 |
T |
|
| Q |
210 |
ggaaaatacacggtcttttaacggtcctcttccttatcctcccccaagtccacgcctggaacttgtactactacataatatgttctgtg |
298 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||||| |||| | ||||||||||||||||||||||||||||||| |
|
|
| T |
50334742 |
ggaaaatacacgg--------------tcttccttatcctcccccaagtctacgcatagaacttgtactactacataatatgttctgtg |
50334816 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 105 - 285
Target Start/End: Original strand, 50006869 - 50007049
Alignment:
| Q |
105 |
aataaatattacacttcaacgcatcggacataaagatgtaaaaggttattttcaaccatcacgcgaaacatgtaatcaacgtcgctatcatctttgacta |
204 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| ||||||||||||||| |
|
|
| T |
50006869 |
aataaatattacacttcaacggatcggacataaagatgtaaaaggttattttcaaccatcacgggaaacttgtaatcaacgtcagtatcatctttgacta |
50006968 |
T |
|
| Q |
205 |
gttgtggaaaatacacggtcttttaacggtcctcttccttatcctcccccaagtccacgcctggaacttgtactactacat |
285 |
Q |
| |
|
||||||||||||||||||| || ||| || |||||||||||||||||||| |||||||||||||||||| ||||||||| |
|
|
| T |
50006969 |
gttgtggaaaatacacggttttccaacaatcatcttccttatcctcccccaaatccacgcctggaacttgtcctactacat |
50007049 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 16 - 226
Target Start/End: Original strand, 156573 - 156783
Alignment:
| Q |
16 |
caaattcattgttaagttacatcaacacaaattcattaaaattcaacgatacggacacaaattcggaaaacattacactattacacgttaataaatatta |
115 |
Q |
| |
|
||||||||| ||||| |||||| |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||| | | ||||| |||| |
|
|
| T |
156573 |
caaattcatcgttaaattacataaacacaaattcattaaaattcaacaatacggacacaaattcggaaaacatttcactattacccttaaataatgatta |
156672 |
T |
|
| Q |
116 |
cacttcaacgcatcggacataaagatgtaaaaggttattttcaaccatcacgcgaaacatgtaatcaacgtcgctatcatctttgactagttgtggaaaa |
215 |
Q |
| |
|
|||||||||| |||||||| |||||| ||| |||||| |||||||| || | ||||||| |||||||||||||||||||||||| ||||||||| || |
|
|
| T |
156673 |
cacttcaacggatcggacaaaaagatacaaagtgttattctcaaccattaccctaaacatgaaatcaacgtcgctatcatctttgagaagttgtggataa |
156772 |
T |
|
| Q |
216 |
tacacggtctt |
226 |
Q |
| |
|
||||||||||| |
|
|
| T |
156773 |
tacacggtctt |
156783 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 16 - 268
Target Start/End: Complemental strand, 18486658 - 18486410
Alignment:
| Q |
16 |
caaattcattgttaagttacatcaacacaaattcattaaaattcaacgatacggacacaaattcggaaaacattacactattacacgttaataaatatta |
115 |
Q |
| |
|
||||||||| ||||| |||||| |||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| | ||||||||||| |
|
|
| T |
18486658 |
caaattcatcgttaaattacataaacacaaattcattaaaattcaacaatacagacacaaattcggaaaacattacactattacacttaaataaatatta |
18486559 |
T |
|
| Q |
116 |
cacttcaacgcatcggacataaagatgtaaaaggttattttcaaccatcacgcgaaacatgtaatcaacgtcgctatcatctttgactagttgtggaaaa |
215 |
Q |
| |
|
|||||||||| ||| |||| |||||| ||| ||||| |||||||| | | ||||||||||||||||||||||||||||||| || ||||| || |
|
|
| T |
18486558 |
cacttcaacggatc-gacaaaaagatacaaagtattattctcaaccattaacctaaacatgtaatcaacgtcgctatcatctttg---agaagtggataa |
18486463 |
T |
|
| Q |
216 |
tacacggtcttttaacggtcctcttccttatcctcccccaagtccacgcctgg |
268 |
Q |
| |
|
||||||||||| | ||| |||||||||| ||||||||||||||| ||||| |
|
|
| T |
18486462 |
tacacggtcttccagaagtcttcttccttattctcccccaagtccacacctgg |
18486410 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 39 - 244
Target Start/End: Complemental strand, 41784967 - 41784763
Alignment:
| Q |
39 |
aacacaaattcattaaaattcaacgatacggacacaaattcggaaaacattacactattacacgttaataaatattacacttcaacgcatcggacataaa |
138 |
Q |
| |
|
|||||||||||||| ||||||||| || ||||||||||||| || |||||||||||||||||||| |||||||||||||||||| | ||| |||||||| |
|
|
| T |
41784967 |
aacacaaattcatttaaattcaacattaaggacacaaattcg-aacacattacactattacacgttcataaatattacacttcaatggatcagacataaa |
41784869 |
T |
|
| Q |
139 |
gatgtaaaaggttattttcaaccatcacgcgaaacatgtaatcaacgtcgctatcatctttgactagttgtggaaaatacacggtcttttaacggtcctc |
238 |
Q |
| |
|
||||||||| ||||||||||||||| | | |||||||||||||||||| ||||||| || || ||| ||||||||||| ||||| ||| ||||| |
|
|
| T |
41784868 |
gatgtaaaatgttattttcaaccattaaactaaacatgtaatcaacgtctctatcatattcgataagtgttggaaaatacattgtcttctaaaagtcctt |
41784769 |
T |
|
| Q |
239 |
ttcctt |
244 |
Q |
| |
|
|||||| |
|
|
| T |
41784768 |
ttcctt |
41784763 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 16 - 120
Target Start/End: Original strand, 5534080 - 5534184
Alignment:
| Q |
16 |
caaattcattgttaagttacatcaacacaaattcattaaaattcaacgatacggacacaaattcggaaaacattacactattacacgttaataaatatta |
115 |
Q |
| |
|
||||||||| ||||| ||||||||||||||||||||||||||||||| |||| |||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
5534080 |
caaattcatcgttaatttacatcaacacaaattcattaaaattcaacaatactgacacaaatttagaaaacattacactattacacgttaataaatattt |
5534179 |
T |
|
| Q |
116 |
cactt |
120 |
Q |
| |
|
||||| |
|
|
| T |
5534180 |
cactt |
5534184 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 32 - 141
Target Start/End: Complemental strand, 41420213 - 41420104
Alignment:
| Q |
32 |
ttacatcaacacaaattcattaaaattcaacgatacggacacaaattcggaaaacattacactattacacgttaataaatattacacttcaacgcatcgg |
131 |
Q |
| |
|
|||||| |||||||||||||||||||||||| ||| |||||||||||| ||||||||||||||||||||| | ||||| ||||||||||| || ||||| |
|
|
| T |
41420213 |
ttacataaacacaaattcattaaaattcaacaatatggacacaaattcagaaaacattacactattacacttaaataatgattacacttcagcggatcgg |
41420114 |
T |
|
| Q |
132 |
acataaagat |
141 |
Q |
| |
|
||| |||||| |
|
|
| T |
41420113 |
acaaaaagat |
41420104 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 94 - 156
Target Start/End: Complemental strand, 21178580 - 21178519
Alignment:
| Q |
94 |
tattacacgttaataaatattacacttcaacgcatcggacataaagatgtaaaaggttatttt |
156 |
Q |
| |
|
||||||||||||||| |||||||||||||| | | |||||| |||||| ||||| |||||||| |
|
|
| T |
21178580 |
tattacacgttaatacatattacacttcaatggagcggacacaaagat-taaaatgttatttt |
21178519 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 127; Significance: 1e-65; HSPs: 12)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 39 - 295
Target Start/End: Original strand, 15892946 - 15893198
Alignment:
| Q |
39 |
aacacaaattcattaaaattcaacgatacggacacaaattcggaaaacattacactattacacgttaataaatattacacttcaacgcatcggacataaa |
138 |
Q |
| |
|
|||||||||||||||||||||||| |||||| |||||||| || ||||||||||||||||||||||||||||||||||||||||| ||| |||||||| |
|
|
| T |
15892946 |
aacacaaattcattaaaattcaacattacggaaacaaattca-aacacattacactattacacgttaataaatattacacttcaacggatcagacataaa |
15893044 |
T |
|
| Q |
139 |
gatgtaaaaggttattttcaaccatcacgcgaaacatgtaatcaacgtcgctatcatctttgactagttgtggaaaatacacggtcttttaacggtcctc |
238 |
Q |
| |
|
||||||||| ||||||||||||||| | | ||||||||| || ||||||||||||||||| ||||||||||||||||||||||| || ||| || |
|
|
| T |
15893045 |
gatgtaaaatgttattttcaaccattaacctaaacatgta---aatatcgctatcatctttgacaagttgtggaaaatacacggtcttccaaaagtcatc |
15893141 |
T |
|
| Q |
239 |
ttccttatcctcccccaagtccacgcctggaacttgtactactacataatatgttct |
295 |
Q |
| |
|
|||||||||||||||||||||||||| ||| | ||||||| ||||| | ||||||| |
|
|
| T |
15893142 |
ttccttatcctcccccaagtccacgcatggcgcatgtactattacatgagatgttct |
15893198 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 16 - 259
Target Start/End: Original strand, 5015913 - 5016156
Alignment:
| Q |
16 |
caaattcattgttaagttacatcaacacaaattcattaaaattcaacgatacggacacaaattcggaaaacattacactattacacgttaataaatatta |
115 |
Q |
| |
|
||||||||| ||||| ||||| |||||||||||||||||||||||| |||||||||||||||||||||| |||||||| |||||| | ||||| |||| |
|
|
| T |
5015913 |
caaattcatcgttaaattacacaaacacaaattcattaaaattcaacaatacggacacaaattcggaaaatattacactgttacacttaaataatgatta |
5016012 |
T |
|
| Q |
116 |
cacttcaacgcatcggacataaagatgtaaaaggttattttcaaccatcacgcgaaacatgtaatcaacgtcgctatcatctttgactagttgtggaaaa |
215 |
Q |
| |
|
|||||||||| |||||||| |||||| ||| |||||| |||||||| || | ||| ||| |||||||||| ||||||||||||| ||||||||| || |
|
|
| T |
5016013 |
cacttcaacggatcggacaaaaagatacaaagtgttattctcaaccattaccctaaatatgaaatcaacgtcactatcatctttgagaagttgtggataa |
5016112 |
T |
|
| Q |
216 |
tacacggtcttttaacggtcctcttccttatcctcccccaagtc |
259 |
Q |
| |
|
||||| ||||| || |||||||||||||||||||| |||||| |
|
|
| T |
5016113 |
tacacagtcttctagaagtcctcttccttatcctccctcaagtc |
5016156 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 16 - 181
Target Start/End: Complemental strand, 33228556 - 33228392
Alignment:
| Q |
16 |
caaattcattgttaagttacatcaacacaaattcattaaaattcaacgatacggacacaaattcggaaaacattacactattacacgttaataaatatta |
115 |
Q |
| |
|
||||||||| ||||| |||||| ||||||||||||||||||||||| |||| |||||||||||| ||| ||||| ||||| | |||||||||||||| |
|
|
| T |
33228556 |
caaattcatcgttaaattacataaacacaaattcattaaaattcaataatacagacacaaattcgagaaa-attacgatattaaatgttaataaatatta |
33228458 |
T |
|
| Q |
116 |
cacttcaacgcatcggacataaagatgtaaaaggttattttcaaccatcacgcgaaacatgtaatc |
181 |
Q |
| |
|
|||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
33228457 |
gacttcaacagatcggacgtaaagatgtaaaatgttattttcaaccatcacgcgaaacatgtaatc |
33228392 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 39 - 244
Target Start/End: Complemental strand, 30944987 - 30944784
Alignment:
| Q |
39 |
aacacaaattcattaaaattcaacgatacggacacaaattcggaaaacattacactattacacgttaataaatattacacttcaacgcatcggacataaa |
138 |
Q |
| |
|
|||||||||||||| ||||||||| |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||| | ||| |||||||| |
|
|
| T |
30944987 |
aacacaaattcatttaaattcaacattacggacacaaatt--gaaaacattacactattacacgttcataaatattacacttcaatggatcagacataaa |
30944890 |
T |
|
| Q |
139 |
gatgtaaaaggttattttcaaccatcacgcgaaacatgtaatcaacgtcgctatcatctttgactagttgtggaaaatacacggtcttttaacggtcctc |
238 |
Q |
| |
|
|||| |||| ||||||||||||||| | |||||||||| ||||||| |||||||||| | ||| ||||||||||| ||||| ||| |||||| |
|
|
| T |
30944889 |
gatgcaaaatgttattttcaaccattaaattaaacatgtaaccaacgtctctatcatcttctataagtgttggaaaatacattgtcttctaaaagtcctc |
30944790 |
T |
|
| Q |
239 |
ttcctt |
244 |
Q |
| |
|
|||||| |
|
|
| T |
30944789 |
ttcctt |
30944784 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 16 - 259
Target Start/End: Complemental strand, 5075839 - 5075604
Alignment:
| Q |
16 |
caaattcattgttaagttacatcaacacaaattcattaaaattcaacgatacggacacaaattcggaaaacattacactattacacgttaataaatatta |
115 |
Q |
| |
|
||||||||| ||||| |||||| |||| ||||||||||||||||||| ||||| ||||||||||||||||||||||||| | ||||| |||| |
|
|
| T |
5075839 |
caaattcatcgttaaattacataaacataaattcattaaaattcaacaatacgaacacaaattcggaaaacattacact--------taaataatgatta |
5075748 |
T |
|
| Q |
116 |
cacttcaacgcatcggacataaagatgtaaaaggttattttcaaccatcacgcgaaacatgtaatcaacgtcgctatcatctttgactagttgtggaaaa |
215 |
Q |
| |
|
||||||| | |||||||| |||||| || |||||| |||||||| || | ||||||| |||||||||||||||||||||||| ||||||||| || |
|
|
| T |
5075747 |
cacttcagtggatcggacaaaaagatacaacttgttattctcaaccattaccctaaacatgaaatcaacgtcgctatcatctttgagaagttgtggataa |
5075648 |
T |
|
| Q |
216 |
tacacggtcttttaacggtcctcttccttatcctcccccaagtc |
259 |
Q |
| |
|
|||||||| || | ||| |||||||| |||||||||||||| |
|
|
| T |
5075647 |
tacacggttttccagaagtcatcttccttctcctcccccaagtc |
5075604 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 41 - 226
Target Start/End: Original strand, 4472722 - 4472906
Alignment:
| Q |
41 |
cacaaattcattaaaattcaacgatacggacacaaattcggaaaacattacactattacacgttaataaatattacacttcaacgcatcggacataaaga |
140 |
Q |
| |
|
||||||||||||||||| || | || | ||||||||| | || ||||||||||||||||||||||||||||||||||||||| | ||| |||| ||||| |
|
|
| T |
4472722 |
cacaaattcattaaaatgcatcattatgaacacaaatttg-aacacattacactattacacgttaataaatattacacttcaatggatcagacacaaaga |
4472820 |
T |
|
| Q |
141 |
tgtaaaaggttattttcaaccatcacgcgaaacatgtaatcaacgtcgctatcatctttgactagttgtggaaaatacacggtctt |
226 |
Q |
| |
|
||||||| ||||||||||||||| | | |||||| ||||||||||||| ||||| || | ||||||||||||||||||||| |
|
|
| T |
4472821 |
tgtaaaatgttattttcaaccattaaactaaacatctaatcaacgtcgccgtcatcgaggataacttgtggaaaatacacggtctt |
4472906 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 114 - 261
Target Start/End: Original strand, 24619105 - 24619252
Alignment:
| Q |
114 |
tacacttcaacgcatcggacataaagatgtaaaaggttattttcaaccatcacgcgaaacatgtaatcaacgtcgctatcatctttgactagttgtggaa |
213 |
Q |
| |
|
||||| |||| | |||||||| ||||||| ||| |||||||||||||| | | |||||||||||||||||| ||||||||||||| ||||||||| |
|
|
| T |
24619105 |
tacacctcaatggatcggacacaaagatgcaaatttttattttcaaccattaacctaaacatgtaatcaacgtcactatcatctttgaaaagttgtggat |
24619204 |
T |
|
| Q |
214 |
aatacacggtcttttaacggtcctcttccttatcctcccccaagtcca |
261 |
Q |
| |
|
|||||||| ||||| || ||||||||||||||||||||||||||||| |
|
|
| T |
24619205 |
aatacacgatctttcaaaagtcctcttccttatcctcccccaagtcca |
24619252 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 39 - 116
Target Start/End: Original strand, 24618883 - 24618959
Alignment:
| Q |
39 |
aacacaaattcattaaaattcaacgatacggacacaaattcggaaaacattacactattacacgttaataaatattac |
116 |
Q |
| |
|
|||||||||||||||||||||||| ||| ||||||||||| ||| ||||||||||||||||||||||| |||||||| |
|
|
| T |
24618883 |
aacacaaattcattaaaattcaacattacagacacaaattc-gaacacattacactattacacgttaatgaatattac |
24618959 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 85 - 226
Target Start/End: Complemental strand, 29671372 - 29671231
Alignment:
| Q |
85 |
acattacactattacacgttaataaatattacacttcaacgcatcggacataaagatgtaaaaggttattttcaaccatcacgcgaaacatgtaatcaac |
184 |
Q |
| |
|
|||||||||||||| ||||||||| |||||||||||||| | ||| |||||||||||||||| ||||||| |||||| | | ||| |||||||| | |
|
|
| T |
29671372 |
acattacactattatacgttaatatatattacacttcaatggatcaaacataaagatgtaaaaatttatttttaaccattaacctaaaaatgtaatcgat |
29671273 |
T |
|
| Q |
185 |
gtcgctatcatctttgactagttgtggaaaatacacggtctt |
226 |
Q |
| |
|
|| || |||||| | || | ||||||||||||||||||||| |
|
|
| T |
29671272 |
gttgccatcatcatggataacttgtggaaaatacacggtctt |
29671231 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 119 - 263
Target Start/End: Complemental strand, 32076434 - 32076290
Alignment:
| Q |
119 |
ttcaacgcatcggacataaagatgtaaaaggttattttcaaccatcacgcgaaacatgtaatcaacgtcgctatcatctttgactagttgtggaaaatac |
218 |
Q |
| |
|
||||||| |||||| | ||||||||||| ||||| |||||||| | | ||||||||||||||||||| | || ||||||| |||||| | ||||| |
|
|
| T |
32076434 |
ttcaacgaatcggagaaaaagatgtaaattgttatcctcaaccattaacctaaacatgtaatcaacgtcgttttcgtctttgagatgttgtgaataatac |
32076335 |
T |
|
| Q |
219 |
acggtcttttaacggtcctcttccttatcctcccccaagtccacg |
263 |
Q |
| |
|
|| ||||| ||| |||||||||||||| |||||||||||||||| |
|
|
| T |
32076334 |
acagtcttctaaaagtcctcttccttattctcccccaagtccacg |
32076290 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 85 - 163
Target Start/End: Original strand, 27187741 - 27187816
Alignment:
| Q |
85 |
acattacactattacacgttaataaatattacacttcaacgcatcggacataaagatgtaaaaggttattttcaaccat |
163 |
Q |
| |
|
||||||||||| |||||||||| |||||| |||| || | |||| ||||||||| |||||| ||||||||||||||| |
|
|
| T |
27187741 |
acattacactactacacgttaa---atattagactttaatggatcgaacataaagacgtaaaatgttattttcaaccat |
27187816 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 110 - 181
Target Start/End: Original strand, 44015537 - 44015608
Alignment:
| Q |
110 |
atattacacttcaacgcatcggacataaagatgtaaaaggttattttcaaccatcacgcgaaacatgtaatc |
181 |
Q |
| |
|
||||||||||||| | | |||||| |||||||||||| |||||||||||||||| | |||||||||||| |
|
|
| T |
44015537 |
atattacacttcagtggaccggacacaaagatgtaaaattttattttcaaccatcaacctaaacatgtaatc |
44015608 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0015 (Bit Score: 100; Significance: 2e-49; HSPs: 1)
Name: scaffold0015
Description:
Target: scaffold0015; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 16 - 267
Target Start/End: Complemental strand, 33188 - 32937
Alignment:
| Q |
16 |
caaattcattgttaagttacatcaacacaaattcattaaaattcaacgatacggacacaaattcggaaaacattacactattacacgttaataaatatta |
115 |
Q |
| |
|
||||||||| ||||| |||||| |||||| ||||||||||| ||||| ||||||| | |||||||||||||||||||||||||||| | |||||| |||| |
|
|
| T |
33188 |
caaattcatcgttaaattacataaacacatattcattaaaaatcaacaatacggatataaattcggaaaacattacactattacacttaaataaaaatta |
33089 |
T |
|
| Q |
116 |
cacttcaacgcatcggacataaagatgtaaaaggttattttcaaccatcacgcgaaacatgtaatcaacgtcgctatcatctttgactagttgtggaaaa |
215 |
Q |
| |
|
|||| |||| |||||||| |||||| ||| |||||| ||||| || | | |||||||||||||||||||||||| ||||||| | ||||||| || |
|
|
| T |
33088 |
cactacaacagatcggacaaaaagatacaaagtgttattctcaactattaacctaaacatgtaatcaacgtcgctatcgtctttgaaaaattgtggataa |
32989 |
T |
|
| Q |
216 |
tacacggtcttttaacggtcctcttccttatcctcccccaagtccacgcctg |
267 |
Q |
| |
|
||||||||||| ||| ||||||||||||||||||||||||| ||||| |
|
|
| T |
32988 |
tacacggtcttcctgaagtcttcttccttatcctcccccaagtccatgcctg |
32937 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0070 (Bit Score: 57; Significance: 8e-24; HSPs: 1)
Name: scaffold0070
Description:
Target: scaffold0070; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 68 - 196
Target Start/End: Original strand, 45707 - 45834
Alignment:
| Q |
68 |
ggacacaaattcggaaaacattacactattacacgttaataaatattacacttcaacgcatcggacataaagatgtaaaaggttattttcaaccatcacg |
167 |
Q |
| |
|
||||||||||||| || | ||||||||||||||||| |||| |||||||||||||| | | |||||| |||||||||||| ||||||||||||||| | |
|
|
| T |
45707 |
ggacacaaattcg-aacatattacactattacacgtcaatacatattacacttcaatggagcggacacaaagatgtaaaatgttattttcaaccattaac |
45805 |
T |
|
| Q |
168 |
cgaaacatgtaatcaacgtcgctatcatc |
196 |
Q |
| |
|
| |||||||||||| || |||| |||||| |
|
|
| T |
45806 |
ctaaacatgtaatctacatcgccatcatc |
45834 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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