View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11268_high_37 (Length: 240)
Name: NF11268_high_37
Description: NF11268
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11268_high_37 |
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Alignment Details
Target: chr4 (Bit Score: 105; Significance: 1e-52; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 59 - 226
Target Start/End: Complemental strand, 41631570 - 41631403
Alignment:
| Q |
59 |
tcagattcagaaatttttgtgactcttaaaaatttctagtttcttagtnnnnnnnnnnnnnnnnntcctagttagttctgtaatttcttccagagcatcc |
158 |
Q |
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| T |
41631570 |
tcagattcagaaatttttgtgactcttaaaaatttatagtttcttagtaaaaaataaaataaaaatcctagttagttctgtaatttcttccagagcatcc |
41631471 |
T |
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| Q |
159 |
aatccaaacactgaaaaagaaactaatagtgcagtcctattgacttctttcatcattaaccgtctctg |
226 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| |
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| T |
41631470 |
aatccaaacactgaaaaagaaactaatagtgcagtcctattggcttctttcatcattaaccgtttctg |
41631403 |
T |
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