View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11268_high_38 (Length: 239)
Name: NF11268_high_38
Description: NF11268
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11268_high_38 |
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Alignment Details
Target: chr4 (Bit Score: 199; Significance: 1e-108; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 5 - 207
Target Start/End: Original strand, 51845098 - 51845300
Alignment:
| Q |
5 |
tcctattccagaattcaaacaagatattaaatctttagacgtgtctaacaacaagttacaaggtgcaatacctggtcccttgtccaagtatgaggcaaaa |
104 |
Q |
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| T |
51845098 |
tcctattccagaattcaaacaagatattaaatctttagacatgtctaacaacaagttacaaggtgcaatacctggtcccttgtccaagtatgaggcaaaa |
51845197 |
T |
|
| Q |
105 |
tcttttgcaggaaatgaagagctttgtgggaagccacttgacaaagcatgcgatccttcttcggatttaacgtcaccacctagcgatggatccggacaag |
204 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
51845198 |
tcttttgcaggaaatgaagagctttgtgggaagccacttgacaaagcatgcgatccttcttcggatttaacgtcaccacctagcgatggatccggacaag |
51845297 |
T |
|
| Q |
205 |
ata |
207 |
Q |
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||| |
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| T |
51845298 |
ata |
51845300 |
T |
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