View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11268_low_25 (Length: 294)
Name: NF11268_low_25
Description: NF11268
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11268_low_25 |
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Alignment Details
Target: chr7 (Bit Score: 228; Significance: 1e-126; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 30 - 282
Target Start/End: Complemental strand, 5214871 - 5214623
Alignment:
| Q |
30 |
acttgtgttatactatgttggtatttgtattttatttttatcgacacgtagatgtaacataaaagcatgctaatctttctagttaaaggaaaacgaacat |
129 |
Q |
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| T |
5214871 |
acttgtgttatactatgttggcatttgtattttatttttatcgacacgtagatgtaacataac----tgctaatctttctagttaaaggaaaacgaacat |
5214776 |
T |
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| Q |
130 |
gttattgtgattgtgtaaccttgttttagtttgttgttggaaatacaacgtccaagattttgaacaaatttgagaattttaatttcctcttctgtggact |
229 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
5214775 |
gttattgtgattgtgtaaccttgttttagtttgttgttggaaatacaacgtccaagattttgaacaaatttgagaattttaatttcctcttctgtggact |
5214676 |
T |
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| Q |
230 |
taatatttcaaatacgtacaaaatagcatatgtttaatgtaatcattgttcat |
282 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
5214675 |
taatatttcaaatacgtacaaaatagcatatgtttaatgtaatcattgttcat |
5214623 |
T |
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