View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11269_high_13 (Length: 395)

Name: NF11269_high_13
Description: NF11269
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11269_high_13
NF11269_high_13
[»] chr1 (20 HSPs)
chr1 (7-199)||(13516018-13516210)
chr1 (17-198)||(50001562-50001746)
chr1 (7-198)||(29763411-29763605)
chr1 (7-148)||(21042343-21042483)
chr1 (7-158)||(52939854-52940005)
chr1 (7-117)||(47191574-47191683)
chr1 (7-199)||(20959105-20959295)
chr1 (15-163)||(20134202-20134352)
chr1 (35-163)||(21684003-21684131)
chr1 (7-128)||(16092878-16092998)
chr1 (7-158)||(22125272-22125420)
chr1 (7-122)||(22777436-22777553)
chr1 (7-199)||(14801463-14801659)
chr1 (7-199)||(14810337-14810533)
chr1 (7-61)||(48521486-48521540)
chr1 (7-163)||(16382108-16382264)
chr1 (84-199)||(20271623-20271738)
chr1 (41-166)||(13527514-13527640)
chr1 (10-199)||(45755600-45755791)
chr1 (7-49)||(22145601-22145645)
[»] scaffold0125 (1 HSPs)
scaffold0125 (7-199)||(838-1029)
[»] chr3 (32 HSPs)
chr3 (7-199)||(15080535-15080723)
chr3 (46-198)||(16980031-16980185)
chr3 (7-199)||(24152172-24152364)
chr3 (7-163)||(11202293-11202448)
chr3 (7-163)||(22652847-22653002)
chr3 (7-158)||(9578617-9578767)
chr3 (7-125)||(21838447-21838564)
chr3 (7-163)||(32402003-32402160)
chr3 (7-199)||(15266302-15266493)
chr3 (7-148)||(8927394-8927534)
chr3 (15-158)||(320239-320383)
chr3 (7-166)||(37641314-37641477)
chr3 (83-158)||(37428759-37428834)
chr3 (70-160)||(14604997-14605087)
chr3 (7-163)||(15207909-15208053)
chr3 (110-199)||(3263741-3263830)
chr3 (109-199)||(6820388-6820477)
chr3 (7-199)||(13521990-13522178)
chr3 (110-190)||(49968650-49968729)
chr3 (15-66)||(12386411-12386462)
chr3 (82-128)||(23317788-23317834)
chr3 (114-199)||(23392557-23392642)
chr3 (9-180)||(11885357-11885530)
chr3 (87-163)||(15246953-15247029)
chr3 (109-199)||(3393535-3393624)
chr3 (82-199)||(13919925-13920045)
chr3 (110-181)||(6804685-6804757)
chr3 (15-66)||(43928087-43928139)
chr3 (82-199)||(12386507-12386627)
chr3 (7-40)||(37428691-37428724)
chr3 (163-199)||(13100552-13100588)
chr3 (104-164)||(14502246-14502305)
[»] chr7 (33 HSPs)
chr7 (7-199)||(37793179-37793370)
chr7 (7-198)||(16549784-16549978)
chr7 (7-198)||(16615684-16615878)
chr7 (7-199)||(14980457-14980648)
chr7 (7-199)||(15409933-15410124)
chr7 (7-198)||(29051960-29052155)
chr7 (7-190)||(11091720-11091903)
chr7 (7-199)||(38519757-38519948)
chr7 (8-190)||(11085595-11085777)
chr7 (7-199)||(129728-129919)
chr7 (46-179)||(17052561-17052694)
chr7 (7-199)||(11767876-11768068)
chr7 (7-199)||(14274406-14274598)
chr7 (7-128)||(42462947-42463067)
chr7 (7-158)||(16997166-16997314)
chr7 (30-156)||(9032386-9032512)
chr7 (7-199)||(18455376-18455568)
chr7 (15-158)||(17016423-17016569)
chr7 (7-163)||(11524632-11524778)
chr7 (7-166)||(19485783-19485946)
chr7 (38-121)||(13848778-13848861)
chr7 (8-83)||(9176738-9176813)
chr7 (15-128)||(16092469-16092584)
chr7 (84-199)||(12558077-12558193)
chr7 (110-163)||(15203357-15203410)
chr7 (110-180)||(23461419-23461489)
chr7 (110-179)||(8135037-8135106)
chr7 (7-61)||(9724726-9724779)
chr7 (46-138)||(8249077-8249170)
chr7 (81-180)||(40554314-40554413)
chr7 (106-138)||(15095479-15095511)
chr7 (151-199)||(15117592-15117639)
chr7 (113-199)||(18008120-18008206)
[»] chr2 (27 HSPs)
chr2 (7-199)||(23079661-23079852)
chr2 (7-199)||(27473530-27473714)
chr2 (7-198)||(18357760-18357954)
chr2 (7-198)||(21080748-21080942)
chr2 (7-198)||(21915703-21915897)
chr2 (38-198)||(25184300-25184462)
chr2 (7-198)||(357960-358155)
chr2 (38-199)||(22502105-22502268)
chr2 (38-199)||(22510039-22510202)
chr2 (38-198)||(12626182-12626344)
chr2 (56-163)||(27845684-27845792)
chr2 (7-163)||(43946337-43946497)
chr2 (7-163)||(18545966-18546122)
chr2 (109-191)||(22704201-22704283)
chr2 (110-199)||(24833807-24833895)
chr2 (82-199)||(26393476-26393594)
chr2 (74-199)||(21115828-21115953)
chr2 (7-66)||(39827115-39827173)
chr2 (10-190)||(24792553-24792731)
chr2 (77-171)||(3539988-3540081)
chr2 (110-199)||(14694507-14694596)
chr2 (110-199)||(25046300-25046389)
chr2 (110-175)||(22260229-22260294)
chr2 (93-190)||(24688246-24688342)
chr2 (110-171)||(44072742-44072803)
chr2 (151-199)||(22458467-22458514)
chr2 (93-169)||(24684991-24685066)
[»] chr6 (28 HSPs)
chr6 (7-199)||(15684422-15684614)
chr6 (7-198)||(15900433-15900627)
chr6 (7-198)||(15173232-15173426)
chr6 (70-198)||(23664836-23664965)
chr6 (7-163)||(18707255-18707410)
chr6 (10-163)||(18454205-18454357)
chr6 (7-123)||(18697504-18697619)
chr6 (7-158)||(20137647-20137799)
chr6 (7-158)||(22195070-22195222)
chr6 (7-199)||(17228852-17229042)
chr6 (7-163)||(23527122-23527278)
chr6 (103-199)||(15816437-15816533)
chr6 (7-163)||(22792248-22792409)
chr6 (30-199)||(18895264-18895433)
chr6 (8-199)||(23077697-23077890)
chr6 (56-128)||(19363492-19363563)
chr6 (110-199)||(20183906-20183995)
chr6 (110-199)||(22151996-22152085)
chr6 (109-199)||(23076233-23076322)
chr6 (110-199)||(611986-612074)
chr6 (8-83)||(35012135-35012210)
chr6 (7-61)||(23539903-23539957)
chr6 (110-199)||(19401276-19401364)
chr6 (82-122)||(20225016-20225056)
chr6 (82-122)||(22119000-22119040)
chr6 (82-199)||(33444118-33444238)
chr6 (110-163)||(18259000-18259053)
chr6 (8-162)||(22375621-22375775)
[»] scaffold0338 (3 HSPs)
scaffold0338 (7-199)||(310-502)
scaffold0338 (7-163)||(2668-2823)
scaffold0338 (110-199)||(10545-10633)
[»] chr8 (35 HSPs)
chr8 (7-199)||(17459995-17460186)
chr8 (7-198)||(23479161-23479356)
chr8 (7-198)||(19880901-19881095)
chr8 (35-199)||(19807173-19807337)
chr8 (7-198)||(26454787-26454981)
chr8 (9-198)||(17158742-17158934)
chr8 (7-199)||(43113098-43113288)
chr8 (7-199)||(22184113-22184305)
chr8 (7-158)||(17084898-17085048)
chr8 (7-199)||(22245025-22245215)
chr8 (7-190)||(14102149-14102330)
chr8 (7-199)||(22252104-22252293)
chr8 (7-163)||(19928582-19928734)
chr8 (7-199)||(20501017-20501208)
chr8 (24-199)||(22432815-22432991)
chr8 (7-122)||(16198915-16199032)
chr8 (7-199)||(22526483-22526678)
chr8 (7-163)||(28398561-28398715)
chr8 (57-163)||(22342033-22342139)
chr8 (15-128)||(40491886-40491999)
chr8 (57-199)||(22996840-22996982)
chr8 (56-199)||(22984690-22984833)
chr8 (8-163)||(19153833-19153990)
chr8 (82-199)||(16800510-16800628)
chr8 (7-66)||(17085224-17085282)
chr8 (81-199)||(2417799-2417918)
chr8 (15-199)||(20532319-20532506)
chr8 (15-199)||(22423268-22423456)
chr8 (110-161)||(17272451-17272502)
chr8 (77-190)||(45469009-45469120)
chr8 (110-199)||(13660639-13660727)
chr8 (110-199)||(13719282-13719370)
chr8 (7-60)||(37516682-37516734)
chr8 (110-199)||(17218879-17218969)
chr8 (30-120)||(17438523-17438615)
[»] chr5 (26 HSPs)
chr5 (8-198)||(17011808-17012001)
chr5 (7-198)||(31457039-31457234)
chr5 (38-198)||(17876305-17876467)
chr5 (7-163)||(6766832-6766987)
chr5 (7-199)||(23476479-23476670)
chr5 (7-163)||(25573400-25573555)
chr5 (7-163)||(266112-266267)
chr5 (7-123)||(29448919-29449036)
chr5 (7-100)||(23470767-23470859)
chr5 (113-198)||(33898448-33898534)
chr5 (37-199)||(40726790-40726953)
chr5 (7-163)||(15797414-15797571)
chr5 (38-199)||(20572870-20573031)
chr5 (110-199)||(10818037-10818126)
chr5 (110-199)||(22776808-22776897)
chr5 (56-163)||(21344270-21344378)
chr5 (10-199)||(19616237-19616424)
chr5 (70-163)||(21327240-21327334)
chr5 (110-199)||(21405412-21405500)
chr5 (110-199)||(41860380-41860468)
chr5 (10-199)||(25249609-25249800)
chr5 (10-199)||(25313393-25313584)
chr5 (82-199)||(26739578-26739696)
chr5 (83-163)||(21870617-21870698)
chr5 (83-163)||(21874897-21874978)
chr5 (79-199)||(20468969-20469087)
[»] scaffold0138 (1 HSPs)
scaffold0138 (7-198)||(21176-21370)
[»] chr4 (25 HSPs)
chr4 (7-198)||(40620611-40620805)
chr4 (7-198)||(15009042-15009236)
chr4 (7-163)||(12841638-12841793)
chr4 (7-158)||(32305980-32306130)
chr4 (7-158)||(14851852-14852002)
chr4 (22-199)||(26049406-26049582)
chr4 (7-199)||(15792767-15792959)
chr4 (7-163)||(14651700-14651852)
chr4 (7-158)||(26790328-26790482)
chr4 (82-199)||(13847356-13847464)
chr4 (15-199)||(14826092-14826278)
chr4 (7-158)||(21103939-21104086)
chr4 (7-199)||(40909833-40910022)
chr4 (15-199)||(17334279-17334465)
chr4 (36-166)||(22354765-22354896)
chr4 (11-119)||(16044035-16044143)
chr4 (8-199)||(19739815-19740004)
chr4 (8-190)||(27996868-27997049)
chr4 (7-61)||(35811300-35811353)
chr4 (110-180)||(43251034-43251105)
chr4 (110-190)||(6512816-6512895)
chr4 (153-198)||(14186628-14186673)
chr4 (110-199)||(21368-21457)
chr4 (110-199)||(51993744-51993833)
chr4 (7-61)||(13590993-13591046)
[»] scaffold0156 (1 HSPs)
scaffold0156 (7-198)||(16683-16878)
[»] scaffold0034 (1 HSPs)
scaffold0034 (7-198)||(28995-29189)
[»] scaffold0462 (1 HSPs)
scaffold0462 (7-198)||(11302-11496)
[»] scaffold0083 (1 HSPs)
scaffold0083 (7-198)||(2016-2209)
[»] scaffold0632 (1 HSPs)
scaffold0632 (7-198)||(1244-1440)
[»] scaffold0436 (1 HSPs)
scaffold0436 (38-198)||(9071-9233)
[»] scaffold0046 (3 HSPs)
scaffold0046 (7-198)||(21556-21750)
scaffold0046 (82-199)||(25055-25173)
scaffold0046 (82-155)||(15912-15986)
[»] scaffold0169 (1 HSPs)
scaffold0169 (7-163)||(28519-28674)
[»] scaffold0072 (1 HSPs)
scaffold0072 (83-199)||(62107-62225)
[»] scaffold0077 (1 HSPs)
scaffold0077 (7-199)||(54599-54790)
[»] scaffold0290 (1 HSPs)
scaffold0290 (7-163)||(1146-1301)
[»] scaffold0956 (1 HSPs)
scaffold0956 (7-198)||(1156-1339)
[»] scaffold0347 (1 HSPs)
scaffold0347 (7-199)||(9875-10066)
[»] scaffold0010 (2 HSPs)
scaffold0010 (7-199)||(1632-1822)
scaffold0010 (7-199)||(7284-7474)
[»] scaffold0012 (1 HSPs)
scaffold0012 (7-199)||(220122-220313)
[»] scaffold0058 (1 HSPs)
scaffold0058 (73-196)||(6471-6595)
[»] scaffold0016 (1 HSPs)
scaffold0016 (7-163)||(118578-118733)
[»] scaffold0023 (1 HSPs)
scaffold0023 (83-199)||(106159-106277)
[»] scaffold0480 (1 HSPs)
scaffold0480 (7-158)||(10411-10562)
[»] scaffold0126 (1 HSPs)
scaffold0126 (82-199)||(7190-7307)
[»] scaffold0001 (3 HSPs)
scaffold0001 (7-199)||(447486-447677)
scaffold0001 (7-199)||(498396-498586)
scaffold0001 (8-199)||(499135-499324)
[»] scaffold0282 (1 HSPs)
scaffold0282 (7-199)||(17122-17313)
[»] scaffold0108 (1 HSPs)
scaffold0108 (7-163)||(4104-4259)
[»] scaffold0040 (2 HSPs)
scaffold0040 (8-126)||(23191-23309)
scaffold0040 (28-199)||(14336-14507)
[»] scaffold0009 (1 HSPs)
scaffold0009 (38-199)||(191597-191758)
[»] scaffold0054 (1 HSPs)
scaffold0054 (7-158)||(74852-75004)
[»] scaffold0877 (1 HSPs)
scaffold0877 (30-163)||(1829-1964)
[»] scaffold0005 (2 HSPs)
scaffold0005 (7-163)||(165440-165592)
scaffold0005 (15-199)||(13431-13617)
[»] scaffold0914 (1 HSPs)
scaffold0914 (7-199)||(2717-2908)
[»] scaffold0417 (1 HSPs)
scaffold0417 (7-199)||(602-799)
[»] scaffold0011 (1 HSPs)
scaffold0011 (7-148)||(37122-37261)
[»] scaffold0359 (1 HSPs)
scaffold0359 (7-158)||(16409-16556)
[»] scaffold0047 (1 HSPs)
scaffold0047 (15-199)||(22902-23088)
[»] scaffold1835 (1 HSPs)
scaffold1835 (7-158)||(281-432)
[»] scaffold0256 (1 HSPs)
scaffold0256 (9-199)||(1631-1820)
[»] scaffold0180 (2 HSPs)
scaffold0180 (15-199)||(33452-33639)
scaffold0180 (17-180)||(31172-31338)
[»] scaffold0500 (1 HSPs)
scaffold0500 (7-199)||(8471-8659)
[»] scaffold0014 (2 HSPs)
scaffold0014 (38-199)||(203318-203479)
scaffold0014 (75-199)||(79455-79579)
[»] scaffold0439 (1 HSPs)
scaffold0439 (7-199)||(12470-12658)
[»] scaffold1419 (1 HSPs)
scaffold1419 (7-128)||(1029-1150)
[»] scaffold0357 (1 HSPs)
scaffold0357 (8-163)||(4939-5095)
[»] scaffold0081 (1 HSPs)
scaffold0081 (8-199)||(3789-3982)
[»] scaffold0106 (1 HSPs)
scaffold0106 (82-163)||(18671-18753)
[»] scaffold0750 (1 HSPs)
scaffold0750 (70-158)||(4680-4769)
[»] scaffold0708 (1 HSPs)
scaffold0708 (82-199)||(1384-1502)
[»] scaffold0686 (2 HSPs)
scaffold0686 (8-199)||(2453-2648)
scaffold0686 (8-163)||(2254-2413)
[»] scaffold0026 (1 HSPs)
scaffold0026 (110-180)||(22364-22435)
[»] scaffold0151 (1 HSPs)
scaffold0151 (10-163)||(31188-31344)
[»] scaffold0065 (1 HSPs)
scaffold0065 (109-199)||(56120-56209)
[»] scaffold0006 (2 HSPs)
scaffold0006 (8-120)||(98021-98135)
scaffold0006 (8-120)||(107299-107413)
[»] scaffold0123 (1 HSPs)
scaffold0123 (110-190)||(7459-7538)
[»] scaffold0007 (1 HSPs)
scaffold0007 (15-190)||(158603-158779)
[»] scaffold0004 (1 HSPs)
scaffold0004 (79-199)||(111513-111631)
[»] scaffold0396 (1 HSPs)
scaffold0396 (102-199)||(3553-3650)
[»] scaffold0112 (1 HSPs)
scaffold0112 (17-67)||(23026-23075)
[»] scaffold0848 (1 HSPs)
scaffold0848 (110-199)||(1803-1891)
[»] scaffold0589 (1 HSPs)
scaffold0589 (10-180)||(4465-4638)
[»] scaffold0379 (1 HSPs)
scaffold0379 (110-190)||(3687-3766)
[»] scaffold0042 (1 HSPs)
scaffold0042 (109-199)||(29569-29659)
[»] scaffold0037 (1 HSPs)
scaffold0037 (7-39)||(81641-81673)
[»] scaffold0192 (1 HSPs)
scaffold0192 (83-163)||(10936-11017)
[»] scaffold0075 (1 HSPs)
scaffold0075 (110-199)||(61067-61156)
[»] scaffold0434 (1 HSPs)
scaffold0434 (8-62)||(5900-5954)
[»] scaffold0321 (1 HSPs)
scaffold0321 (110-199)||(126-215)
[»] scaffold0261 (1 HSPs)
scaffold0261 (93-163)||(17304-17373)
[»] scaffold0056 (1 HSPs)
scaffold0056 (110-199)||(67303-67391)
[»] scaffold0074 (1 HSPs)
scaffold0074 (103-199)||(9233-9329)


Alignment Details
Target: chr1 (Bit Score: 173; Significance: 6e-93; HSPs: 20)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 173; E-Value: 6e-93
Query Start/End: Original strand, 7 - 199
Target Start/End: Original strand, 13516018 - 13516210
Alignment:
Q  7 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 106  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13516018 ctcttggttcttctctcatcttgttctcccttcttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 13516117  T
Q  107 tattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaacttaattttatttctattttcaagacttattc 199  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  13516118 tattttatcttatttccactttaaccactaaattccctaaatcctcaaaacagccccacaacttaatcttatttctattttcaagacttattc 13516210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 17 - 198
Target Start/End: Original strand, 50001562 - 50001746
Alignment:
Q  17 ttctctcctcttgttctc-cctttttccccaaaactggttgtacgtgaaaa-taattctaaacctagtttctcctatttatctctttccatctattttat 114  Q
    |||||| |||||||| || || ||||| |||||||||||||||| | |||| |||||||||||||||||||||||||||||||||| |||||||||||||    
T  50001562 ttctcttctcttgttttctcccttttctccaaaactggttgtacattaaaaataattctaaacctagtttctcctatttatctcttcccatctattttat 50001661  T
Q  115 cttatttccactttatccactaaattctctaaatcctcaaaacagccccacaa-cttaattttatttctattttcaagacttatt 198  Q
    ||||||||||||| |||||||||| ||||||||| |||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  50001662 cttatttccacttaatccactaaactctctaaattctcaaaacagccccacaatcttaatcttatttctattttcaagacttatt 50001746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 7 - 198
Target Start/End: Complemental strand, 29763605 - 29763411
Alignment:
Q  7 ctcttggttcttctctcctcttgttctc-cctttttccccaaaactggttgtacgtgaaaa-taattctaaacctagtttctcctatttatctctttcca 104  Q
    |||||||||||  ||| |||||||| || || ||||| ||||||||||||||||||||||| |||||||||| ||| |||||||||||||||||||  |     
T  29763605 ctcttggttctcatcttctcttgttttctcccttttctccaaaactggttgtacgtgaaaaataattctaaatctattttctcctatttatctcttctct 29763506  T
Q  105 tctattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaa-cttaattttatttctattttcaagacttatt 198  Q
    ||||||||||||||||||||||| |||||||||| ||||||||| ||||||| |||||||||| |||||| ||||||||||||||||||||||||    
T  29763505 tctattttatcttatttccacttaatccactaaactctctaaattctcaaaatagccccacaatcttaatcttatttctattttcaagacttatt 29763411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 7 - 148
Target Start/End: Complemental strand, 21042483 - 21042343
Alignment:
Q  7 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 106  Q
    |||||||||||||||||||||||||||||||||| | ||||||||| || ||||||||||  |||||||||||| |||||||||||||||||||||||||    
T  21042483 ctcttggttcttctctcctcttgttctccctttt-ctccaaaactgattatacgtgaaaaacattctaaacctattttctcctatttatctctttccatc 21042385  T
Q  107 tattttatcttatttccactttatccactaaattctctaaat 148  Q
    ||||||||||||||||| ||||  |||| ||| |||||||||    
T  21042384 tattttatcttatttcctcttttcccacaaaactctctaaat 21042343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 7 - 158
Target Start/End: Complemental strand, 52940005 - 52939854
Alignment:
Q  7 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 106  Q
    |||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||   ||||||||||| |||||||||||||||| || |||||    
T  52940005 ctcttggttcttctctcctcttgttctccctttt-ctccaaaactggttgtacgtgaaaacttttctaaacctattttctcctatttatcttttcccatc 52939907  T
Q  107 tattttatcttatttccac-tttatccactaaattctctaaatcctcaaaaca 158  Q
    ||||||||||||||||| | |||  |||| ||| ||||||||| |||||||||    
T  52939906 tattttatcttatttcctcattttcccacaaaactctctaaattctcaaaaca 52939854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 7 - 117
Target Start/End: Original strand, 47191574 - 47191683
Alignment:
Q  7 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 106  Q
    |||||||||||||||||||||||||||||||||| | |||||||| |||||||||||||||||||||||||||| ||| ||||||||||||||| |||||    
T  47191574 ctcttggttcttctctcctcttgttctccctttt-ctccaaaactcgttgtacgtgaaaataattctaaacctattttatcctatttatctcttcccatc 47191672  T
Q  107 tattttatctt 117  Q
    |||||||||||    
T  47191673 tattttatctt 47191683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 7 - 199
Target Start/End: Original strand, 20959105 - 20959295
Alignment:
Q  7 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 106  Q
    ||||||||||| |||||||||||||||||||||| | |||||| || ||||| ||||||||||||  ||||||| ||||||||||||||||||| |||||    
T  20959105 ctcttggttct-ctctcctcttgttctccctttt-ctccaaaattgattgtatgtgaaaataattacaaacctattttctcctatttatctcttcccatc 20959202  T
Q  107 tattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaacttaat-tttatttctattttcaagacttattc 199  Q
    ||||||||||||||| | ||||  |||| ||| ||||||||| ||||||||| |||| || || ||| ||||||| |||||||||  |||||||    
T  20959203 tattttatcttattttctcttttcccacaaaactctctaaattctcaaaacaacccctcatctcaatatttattt-tattttcaaatcttattc 20959295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 15 - 163
Target Start/End: Complemental strand, 20134352 - 20134202
Alignment:
Q  15 tcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctag--tttctcctatttatctctttccatctatttt 112  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||  |||||  || |||  ||||||||||||||||||| |||||||||||    
T  20134352 tcttctctcctcttgttctccctttttctccaaaactggttgtacgtgaaaactattct-gacttaggttttctcctatttatctcttcccatctatttt 20134254  T
Q  113 atcttatttccactttat-ccactaaattctctaaatcctcaaaacagcccc 163  Q
    ||||||||||| |||| | |||| ||| ||||||||| ||||||||| ||||    
T  20134253 atcttatttcctctttttcccacaaaactctctaaattctcaaaacaacccc 20134202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 35 - 163
Target Start/End: Original strand, 21684003 - 21684131
Alignment:
Q  35 cctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatctattttatcttatttccactttat-cca 133  Q
    |||||||| |||||||||   |||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||| |||| | |||    
T  21684003 cctttttctccaaaactgaacgtacgtgaaaataattctaa-cctattttctcctatttatctctttccatctattttatcttatttcctctttttccca 21684101  T
Q  134 ctaaattctctaaatcctcaaaacagcccc 163  Q
    | ||| ||||||||| ||||||||| ||||    
T  21684102 caaaactctctaaattctcaaaacaacccc 21684131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 7 - 128
Target Start/End: Complemental strand, 16092998 - 16092878
Alignment:
Q  7 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 106  Q
    ||||||||||||||||| ||| ||||||||||||  ||||||| || |||||||| ||||   |||||| |||| |||||||||||||||||||||||||    
T  16092998 ctcttggttcttctctcttctagttctcccttttctcccaaaagtgattgtacgtaaaaacgtttctaa-cctattttctcctatttatctctttccatc 16092900  T
Q  107 tattttatcttatttccacttt 128  Q
    ||||||||||||||||| ||||    
T  16092899 tattttatcttatttcctcttt 16092878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 7 - 158
Target Start/End: Original strand, 22125272 - 22125420
Alignment:
Q  7 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 106  Q
    |||||| ||||  ||||||||||||||||||||| | |||||||||||||||| |||||||  | |||||| ||  |||||||||||||||| | |||||    
T  22125272 ctcttgattctcttctcctcttgttctccctttt-ctccaaaactggttgtac-tgaaaattgt-ctaaacttatgttctcctatttatctcctcccatc 22125368  T
Q  107 tattttatcttatttccactttatccactaaattctctaaatcctcaaaaca 158  Q
    ||||||||||||||||| ||||  |||| ||| ||||||||| |||||||||    
T  22125369 tattttatcttatttcctcttttcccacaaaactctctaaattctcaaaaca 22125420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 7 - 122
Target Start/End: Original strand, 22777436 - 22777553
Alignment:
Q  7 ctcttggttcttctctcctcttg----ttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttc 102  Q
    |||||||||||  ||||||||||    ||||||||||| | |||||||||   |||||||||||||||||||| |||| |||||||||||||||||||||    
T  22777436 ctcttggttctcttctcctcttgacttttctccctttt-ctccaaaactgaacgtacgtgaaaataattctaa-cctattttctcctatttatctctttc 22777533  T
Q  103 catctattttatcttatttc 122  Q
    ||||||||||||||||||||    
T  22777534 catctattttatcttatttc 22777553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 7 - 199
Target Start/End: Original strand, 14801463 - 14801659
Alignment:
Q  7 ctcttggttcttctctcctcttg----ttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttc 102  Q
    ||||||||||||| || ||||||    |||||||||||   ||||||||| | |||||||||||   |||||||| || ||||||||||||||||||| |    
T  14801463 ctcttggttcttcccttctcttgacttttctcccttttcttccaaaactgatcgtacgtgaaaaactttctaaacttattttctcctatttatctcttcc 14801562  T
Q  103 catctattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaacttaat-tttatttctattttcaagacttattc 199  Q
    |||||||||||||| |||||| ||||  |||| ||| ||||||||  ||||||||| |||| || || ||| ||||||| |||||||||  |||||||    
T  14801563 catctattttatctgatttcctcttttcccacaaaactctctaaaatctcaaaacaacccctcatctcaatatttattt-tattttcaaatcttattc 14801659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 7 - 199
Target Start/End: Original strand, 14810337 - 14810533
Alignment:
Q  7 ctcttggttcttctctcctcttg----ttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttc 102  Q
    ||||||||||||| || ||||||    |||||||||||   ||||||||| | |||||||||||   |||||||| || ||||||||||||||||||| |    
T  14810337 ctcttggttcttcccttctcttgacttttctcccttttcttccaaaactgatcgtacgtgaaaaactttctaaacttattttctcctatttatctcttcc 14810436  T
Q  103 catctattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaacttaat-tttatttctattttcaagacttattc 199  Q
    |||||||||||||| |||||| ||||  |||| ||| ||||||||  ||||||||| |||| || || ||| ||||||| |||||||||  |||||||    
T  14810437 catctattttatctgatttcctcttttcccacaaaactctctaaaatctcaaaacaacccctcatctcaatatttattt-tattttcaaatcttattc 14810533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 48521486 - 48521540
Alignment:
Q  7 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgt 61  Q
    |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||    
T  48521486 ctcttggttcttctctccacttgttctccctttttctccaaaactggttgtacgt 48521540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 7 - 163
Target Start/End: Original strand, 16382108 - 16382264
Alignment:
Q  7 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtt-tctcctatttatctct-ttcca 104  Q
    ||||||||| |||||| |||||||||||||||||  || |||| || |||||||| |||| |||||| |||||| || |||||||||||| | |  || |    
T  16382108 ctcttggttattctcttctcttgttctcccttttctccaaaaagtgattgtacgtaaaaacaattct-aacctaattctctcctatttatatatcctcta 16382206  T
Q  105 tctattttatcttatttccactttatccactaaattctctaaatcctcaaaacagcccc 163  Q
    |||||| ||||||| |||| ||||  |||| ||| ||||||||| | ||||||||||||    
T  16382207 tctattctatctta-ttcctcttttcccacaaaactctctaaattcacaaaacagcccc 16382264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 84 - 199
Target Start/End: Complemental strand, 20271738 - 20271623
Alignment:
Q  84 tctcctatttatctctt-tccatctattttatcttatttccactttatccactaaat-tctctaaatcctcaaaacagccccacaacttaattttatttc 181  Q
    |||||||||||| |||| || ||||||||||||||||| || |||| ||| | |||  ||||||||  |||||||||||||||| ||||||| ||| |||    
T  20271738 tctcctatttatatcttctctatctattttatcttatt-cctctttttcccccaaaactctctaaaatctcaaaacagccccaccacttaatctta-ttc 20271641  T
Q  182 tattttcaagacttattc 199  Q
    |||| |||||||||||||    
T  20271640 tattatcaagacttattc 20271623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 41 - 166
Target Start/End: Complemental strand, 13527640 - 13527514
Alignment:
Q  41 tccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctct-ttccatctattttatcttatttccactttatccactaaat 139  Q
    |||| ||||||| || ||||||||||   ||||||||||||||||  || | |||||||  || ||||| |||||||||||||| || | |||||||||     
T  13527640 tcccaaaaactgtttttacgtgaaaacttttctaaacctagtttcctctttatatctctcctcaatctactttatcttatttcctctatttccactaaac 13527541  T
Q  140 tc-tctaaatcctcaaaacagccccaca 166  Q
    || ||||||| | |||||||||||||||    
T  13527540 tcttctaaattc-caaaacagccccaca 13527514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 10 - 199
Target Start/End: Original strand, 45755600 - 45755791
Alignment:
Q  10 ttggttcttctctcctcttgtt--ctccctttttccccaaaa-ctggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 106  Q
    |||||| |||||| ||||||||  ||||||||||| |||||| || ||| ||||||||||  ||| | | | | ||||||||||||||| || | | | |    
T  45755600 ttggttattctcttctcttgttttctccctttttctccaaaagcttgttttacgtgaaaactattatgacctttgtttctcctatttatttcct-caacc 45755698  T
Q  107 tattttatcttatttccactttatccactaaattc-tctaaatcctcaaaacag-ccccacaacttaattttatttctattttcaagacttattc 199  Q
      |||||||||||||||||||  ||||||||| || | |||||  ||||||||| |||||||||||||| |||||| |||||||||  |||||||    
T  45755699 ctttttatcttatttccacttattccactaaactcttataaat-ttcaaaacagcccccacaacttaatcttattt-tattttcaaatcttattc 45755791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 49
Target Start/End: Complemental strand, 22145645 - 22145601
Alignment:
Q  7 ctcttggttcttctctcctcttg--ttctccctttttccccaaaa 49  Q
    |||||||||||||||| ||||||  ||||||||||||||||||||    
T  22145645 ctcttggttcttctcttctcttgttttctccctttttccccaaaa 22145601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 161; Significance: 9e-86; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 161; E-Value: 9e-86
Query Start/End: Original strand, 7 - 199
Target Start/End: Complemental strand, 1029 - 838
Alignment:
Q  7 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 106  Q
    |||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||    
T  1029 ctcttggttcttctctcctcttgttctccctttt-ctccaaaactggttgtacgtgaaaataattctcaacctagtttctcctatttatctcttcccatc 931  T
Q  107 tattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaacttaattttatttctattttcaagacttattc 199  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  930 tattttatcttattttcacttaatccactaaattctctaaatcctcaaaacagccccacaacttaatcttatttctattttcaagacttattc 838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 160; Significance: 4e-85; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 7 - 199
Target Start/End: Original strand, 15080535 - 15080723
Alignment:
Q  7 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 106  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||    ||||||||||||| ||||||||||||    
T  15080535 ctcttggttcttctctcctcttgttctccctttttccctaaaactggttgtaggtgaaaataattctaaa----gtttctcctatttctctctttccatc 15080630  T
Q  107 tattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaacttaattttatttctattttcaagacttattc 199  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  15080631 tattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaacttaatcttatttctattttcaagacttattc 15080723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 46 - 198
Target Start/End: Original strand, 16980031 - 16980185
Alignment:
Q  46 aaaactggttgtacgtgaaaa-taattctaaacctagtttctcctatttatctctttccatctattttatcttatttccactttatccactaaattctct 144  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||| |||||||||| |||||    
T  16980031 aaaactggttgtacgtgaaaaataattctaaacctagtttctcctatttatctcttcccttctattttatcttatttccacttaatccactaaactctct 16980130  T
Q  145 aaatcctcaaaacagccccacaa-cttaattttatttctattttcaagacttatt 198  Q
    |||| |||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  16980131 aaattctcaaaacagccccacaatcttaatcttatttctattttcaagacttatt 16980185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 7 - 199
Target Start/End: Complemental strand, 24152364 - 24152172
Alignment:
Q  7 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 106  Q
    |||||||||||||||||||||||||||||||||| | ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||| | |    
T  24152364 ctcttggttcttctctcctcttgttctccctttt-ctccaaatctggttgtacgtgaaaataattctaaacctagtttctcctatttatctc-ttcaacc 24152267  T
Q  107 tattttatcttatttccactttatccactaaattc-tctaaatcctcaaaacag-ccccacaactt-aattttatttctattttcaagacttattc 199  Q
       ||||||||||||||| ||  ||||||||| || |||||||  ||||||||| ||||||||||| ||| |||||||||||||||||||||||||    
T  24152266 ctctttatcttatttccatttattccactaaactcttctaaat-ttcaaaacagcccccacaacttaaatcttatttctattttcaagacttattc 24152172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 7 - 163
Target Start/End: Original strand, 11202293 - 11202448
Alignment:
Q  7 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 106  Q
    ||||||||||||||||||| |||||||||||||| | |||||||||||||||||||||||||||| |||||||||||||||| ||||||| ||| |||||    
T  11202293 ctcttggttcttctctccttttgttctccctttt-ctccaaaactggttgtacgtgaaaataattttaaacctagtttctcccatttatcacttcccatc 11202391  T
Q  107 tattttatcttatttccactttatccactaaattctctaaatcctcaaaacagcccc 163  Q
    ||||||||||||||||| ||   ||||| ||| ||||||||| | ||||||||||||    
T  11202392 tattttatcttatttcctctaattccacaaaactctctaaattcacaaaacagcccc 11202448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 7 - 163
Target Start/End: Original strand, 22652847 - 22653002
Alignment:
Q  7 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 106  Q
    |||||||||||||||||||||||||||||||||| | |||||||||||||||| ||||||||| | |||||||||||||||||||||||| ||| |||||    
T  22652847 ctcttggttcttctctcctcttgttctccctttt-ctccaaaactggttgtacatgaaaataactgtaaacctagtttctcctatttatcacttcccatc 22652945  T
Q  107 tattttatcttatttccactttatccactaaattctctaaatcctcaaaacagcccc 163  Q
    |||||||||||||||||  |   ||||| ||| ||||||||| | ||||||||||||    
T  22652946 tattttatcttatttcctttaattccacaaaactctctaaattcacaaaacagcccc 22653002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 7 - 158
Target Start/End: Original strand, 9578617 - 9578767
Alignment:
Q  7 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 106  Q
    |||||||||||  ||||||||||||||||||||| | |||||||||||||||||||||||||||| |||||||  ||||||||||||||||||| ||||     
T  9578617 ctcttggttctcttctcctcttgttctccctttt-ctccaaaactggttgtacgtgaaaataattttaaacctcttttctcctatttatctcttcccata 9578715  T
Q  107 tattttatcttatttccactttatccactaaattctctaaatcctcaaaaca 158  Q
    ||||||||||||||||| ||||  |||| ||| ||||||||| |||||||||    
T  9578716 tattttatcttatttcctcttttcccacaaaactctctaaattctcaaaaca 9578767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 7 - 125
Target Start/End: Original strand, 21838447 - 21838564
Alignment:
Q  7 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 106  Q
    ||||||||||||| ||| ||| |||||||||||| | ||||||||||||||||||||||||||||||||||||||||| |||||||||| || | |||||    
T  21838447 ctcttggttcttccctcttctcgttctccctttt-ctccaaaactggttgtacgtgaaaataattctaaacctagtttttcctatttatttcctcccatc 21838545  T
Q  107 tattttatcttatttccac 125  Q
    |||||||||||||||||||    
T  21838546 tattttatcttatttccac 21838564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 7 - 163
Target Start/End: Complemental strand, 32402160 - 32402003
Alignment:
Q  7 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 106  Q
    ||||||||||||||||||||||||||||||||||  || ||||||| |||||||||||||   ||||||||||| | ||||||||||||||||| | |||    
T  32402160 ctcttggttcttctctcctcttgttctcccttttctccaaaaactgattgtacgtgaaaacttttctaaacctattctctcctatttatctcttcctatc 32402061  T
Q  107 tattttatcttatttccactttat-ccactaaattctctaaatcctcaaaacagcccc 163  Q
    | ||||||||||||||| |||| | |||| ||| ||||||||| ||||||||| ||||    
T  32402060 ttttttatcttatttcctctttttcccacaaaactctctaaattctcaaaacaacccc 32402003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 7 - 199
Target Start/End: Original strand, 15266302 - 15266493
Alignment:
Q  7 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagttt-ctcctatttatctctttccat 105  Q
    |||| ||||||  ||||||||||||||||||||| | |||||||||||||||||||||||||||||||| |||| ||| |||||||||||||||| ||||    
T  15266302 ctctgggttctcttctcctcttgttctccctttt-ctccaaaactggttgtacgtgaaaataattctaa-cctatttttctcctatttatctcttcccat 15266399  T
Q  106 ctattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaacttaat-tttatttctattttcaagacttattc 199  Q
    |||| ||||||||||||| ||||  |||| ||| ||||||||| | ||||||| |||| || || ||| ||||||| |||||||||  |||||||    
T  15266400 ctatcttatcttatttcctcttttcccacaaaactctctaaattcacaaaacaacccctcatctcaatatttattt-tattttcaaatcttattc 15266493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 7 - 148
Target Start/End: Complemental strand, 8927534 - 8927394
Alignment:
Q  7 ctcttggttcttctctcctcttgttctccctttttc-cccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccat 105  Q
    |||||||||||||||||||||||||||||||||||| || |||| || |||||||||||||   |||| |||||| ||||||||||||||||||| ||||    
T  8927534 ctcttggttcttctctcctcttgttctccctttttctccaaaaattgcttgtacgtgaaaa-ctttct-aacctattttctcctatttatctcttcccat 8927437  T
Q  106 ctattttatcttatttccactttatccactaaattctctaaat 148  Q
    |||||||||||||||||| |||| ||| | ||| |||||||||    
T  8927436 ctattttatcttatttcctctttttccccaaaactctctaaat 8927394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 15 - 158
Target Start/End: Original strand, 320239 - 320383
Alignment:
Q  15 tcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaaccta-gtttctcctatttatctctttccatctatttta 113  Q
    ||||||||||||||| ||||||||||  ||||||||||||||||||| |||| ||||||  || || |||||||||||||||||||| ||||||||||||    
T  320239 tcttctctcctcttgctctcccttttctcccaaaactggttgtacgtaaaaacaattct-gacttaggtttctcctatttatctcttcccatctatttta 320337  T
Q  114 tcttatttccactttat-ccactaaattctctaaatcctcaaaaca 158  Q
    |||||||||| |||| | |||| ||  ||||||||| |||||||||    
T  320338 tcttatttcctctttttcccacaaatctctctaaattctcaaaaca 320383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 7 - 166
Target Start/End: Complemental strand, 37641477 - 37641314
Alignment:
Q  7 ctcttggttcttctctcctcttgtt--ctccctt-tttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctct-ttc 102  Q
    ||||||||||| |||| ||||||||  ||||||| |||| ||||||||| | || |||||||||||||||||||||||||||||||||||||||||  ||    
T  37641477 ctcttggttctcctcttctcttgttttctcccttgtttctccaaaactgatcgtccgtgaaaataattctaaacctagtttctcctatttatctctcctc 37641378  T
Q  103 catctattttatcttatttccactttatccactaaattc-tctaaatcctcaaaacagccccaca 166  Q
     ||| | |||||| ||||||| || | ||||||||| || ||||||| | |||||||||||||||    
T  37641377 aatccactttatcctatttcctctatttccactaaactcttctaaattc-caaaacagccccaca 37641314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 83 - 158
Target Start/End: Original strand, 37428759 - 37428834
Alignment:
Q  83 ttctcctatttatctctttccatctattttatcttatttccactttatccactaaattctctaaatcctcaaaaca 158  Q
    |||||||||||||||||| |||||||||||||||||||||| |||| ||||||||| ||||||||| |||||||||    
T  37428759 ttctcctatttatctcttcccatctattttatcttatttcctctttttccactaaactctctaaattctcaaaaca 37428834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 70 - 160
Target Start/End: Original strand, 14604997 - 14605087
Alignment:
Q  70 ttctaaacctagtttctcctatttatctctttccatctattttatcttatttccactttatccactaaattctctaaatcctcaaaacagc 160  Q
    |||||| |||||| ||||||||||||||||| |||||||||||||||||||||| |||   |||||||| | ||||||| |||||||||||    
T  14604997 ttctaaccctagtctctcctatttatctcttcccatctattttatcttatttcctcttatcccactaaactttctaaattctcaaaacagc 14605087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 7 - 163
Target Start/End: Original strand, 15207909 - 15208053
Alignment:
Q  7 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 106  Q
    |||||||||||  |||||||||||||||| |||||| |||||||| |||||||||||||||||||||||           |||||||||||||| | |||    
T  15207909 ctcttggttctcttctcctcttgttctcc-tttttctccaaaactcgttgtacgtgaaaataattctaa-----------cctatttatctcttcctatc 15207996  T
Q  107 tattttatcttatttccactttatccactaaattctctaaatcctcaaaacagcccc 163  Q
    ||| ||||||||||||| ||||  |||| ||| ||||||||| | ||||||| ||||    
T  15207997 tatcttatcttatttcctcttttcccacaaaactctctaaattcacaaaacaacccc 15208053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 110 - 199
Target Start/End: Complemental strand, 3263830 - 3263741
Alignment:
Q  110 tttatcttatttccactttatccactaaattct-ctaaatcctcaaaacagccccacaacttaattttatttctattttcaagacttattc 199  Q
    |||||||||||||| || | ||||||||| ||| ||||||  | ||||||||||||||||||||| |||||||||||||||||||||||||    
T  3263830 tttatcttatttcctctatttccactaaactcttctaaatttt-aaaacagccccacaacttaatcttatttctattttcaagacttattc 3263741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 109 - 199
Target Start/End: Original strand, 6820388 - 6820477
Alignment:
Q  109 ttttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaacttaattttatttctattttcaagacttattc 199  Q
    |||||||||||||||||||  ||| ||| | ||||||||| |||||||||||||||||||||||| |||||| |||||||||  |||||||    
T  6820388 ttttatcttatttccacttattcctctacactctctaaattctcaaaacagccccacaacttaatcttattt-tattttcaaatcttattc 6820477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 7 - 199
Target Start/End: Complemental strand, 13522178 - 13521990
Alignment:
Q  7 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 106  Q
    ||||||||||||||||||| ||||||||| |||||  |||||||| ||||||| | ||||  |||||  ||||| |||||||||||||| ||  || | |    
T  13522178 ctcttggttcttctctccttttgttctcctttttt--ccaaaacttgttgtacataaaaactattct-gacctattttctcctatttatttc-ctcaacc 13522083  T
Q  107 tattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaacttaat-tttatttctattttcaagacttattc 199  Q
       ||||||||||||| ||||  ||||||||| ||||||||| ||||||||| |||| || || ||| ||||||| |||||||||  |||||||    
T  13522082 ctctttatcttatttcaacttattccactaaactctctaaattctcaaaacaacccctcatctcaatctttattt-tattttcaaatcttattc 13521990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 110 - 190
Target Start/End: Complemental strand, 49968729 - 49968650
Alignment:
Q  110 tttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaacttaattttatttctattttcaa 190  Q
    ||||||||||||||||||  ||||||||| ||||||||| |||||||||||||| || || ||| |||||| |||||||||    
T  49968729 tttatcttatttccacttattccactaaagtctctaaattctcaaaacagcccctcatctcaatattattt-tattttcaa 49968650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 66
Target Start/End: Original strand, 12386411 - 12386462
Alignment:
Q  15 tcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaa 66  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||| ||||    
T  12386411 tcttctctcctcttgttctcccttttctcccaaaactggttgtacgtaaaaa 12386462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 82 - 128
Target Start/End: Complemental strand, 23317834 - 23317788
Alignment:
Q  82 tttctcctatttatctctttccatctattttatcttatttccacttt 128  Q
    ||||||||||||||||||| |||||||||||||||||||||| ||||    
T  23317834 tttctcctatttatctcttcccatctattttatcttatttcctcttt 23317788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 114 - 199
Target Start/End: Complemental strand, 23392642 - 23392557
Alignment:
Q  114 tcttatttccactttatccactaaattctctaaatcctcaaaacag-ccccacaacttaattttatttctattttcaagacttattc 199  Q
    ||||||||||||||  |||||||||  |||||||| |||||||||| |||||||||||||| |||||| |||||||||  |||||||    
T  23392642 tcttatttccacttattccactaaacactctaaattctcaaaacagcccccacaacttaatcttattt-tattttcaaatcttattc 23392557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 9 - 180
Target Start/End: Complemental strand, 11885530 - 11885357
Alignment:
Q  9 cttggttcttctctcctcttg--ttctccctttttccccaaaa-ctggttgtacgtgaaaataattctaaacctagtttctcctatttatctcttt--cc 103  Q
    |||||||||||||| ||||||  ||||||||||||| |||||| || |||  |||||||||  ||||| | | | ||||||||||||||| || ||  ||    
T  11885530 cttggttcttctcttctcttggtttctccctttttctccaaaaacttgtttcacgtgaaaactattctgacctttgtttctcctatttatttccttaacc 11885431  T
Q  104 atctattttatcttatttccactttatccactaaattct-ctaaatcctcaaaacagccccacaacttaattttattt 180  Q
     |||   |||||||||||||||||  ||||||||| ||| |||||| | |||||||||||||| ||||||| ||||||    
T  11885430 ctct---ttatcttatttccacttattccactaaactcttctaaattc-caaaacagccccaccacttaatattattt 11885357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 87 - 163
Target Start/End: Original strand, 15246953 - 15247029
Alignment:
Q  87 cctatttatctctttccatctattttatcttatttccactttatccactaaattctctaaatcctcaaaacagcccc 163  Q
    |||||||||||||| |||||||| ||||||||||||| ||||  |||| ||| ||||||||| | ||||||| ||||    
T  15246953 cctatttatctcttcccatctatcttatcttatttcctcttttcccacaaaactctctaaattcacaaaacaacccc 15247029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 109 - 199
Target Start/End: Complemental strand, 3393624 - 3393535
Alignment:
Q  109 ttttatcttatttccactttatccactaaattc-tctaaatcctcaaaacagccccacaacttaattttatttctattttcaagacttattc 199  Q
    |||||||||||||||||||  ||||||||| || ||||||| | |||||||| ||||||||||||| |||||| |||||||||  |||||||    
T  3393624 ttttatcttatttccacttattccactaaactcttctaaattc-caaaacagacccacaacttaatcttattt-tattttcaaatcttattc 3393535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 82 - 199
Target Start/End: Original strand, 13919925 - 13920045
Alignment:
Q  82 tttctcctatttat--ctctttccatctattttatcttatttccactttat-ccactaaattctctaaatcctcaaaacagccccacaacttaat-ttta 177  Q
    ||||||||||||||  ||||| |||||||||||||||||||||| |||| | |||| ||| ||||||||  |||||||||  ||| ||||| ||| ||||    
T  13919925 tttctcctatttatatctcttcccatctattttatcttatttcctctttttcccacaaaactctctaaaatctcaaaacaatccctcaactcaatattta 13920024  T
Q  178 tttctattttcaagacttattc 199  Q
    ||| |||||||||  |||||||    
T  13920025 ttt-tattttcaaatcttattc 13920045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 181
Target Start/End: Complemental strand, 6804757 - 6804685
Alignment:
Q  110 tttatcttatttccactttatccactaaattctctaaatcctcaaaacagcccc-acaacttaattttatttc 181  Q
    ||||||||||| | ||||  ||||||||| |||||||||  |||||||| |||| ||||||||||||||||||    
T  6804757 tttatcttattccaacttattccactaaactctctaaattttcaaaacaacccccacaacttaattttatttc 6804685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 66
Target Start/End: Original strand, 43928087 - 43928139
Alignment:
Q  15 tcttctctcctcttgttctccctttt-tccccaaaactggttgtacgtgaaaa 66  Q
    |||||||||||||||||||||||||| |||| ||||||| |||||||| ||||    
T  43928087 tcttctctcctcttgttctcccttttctcccaaaaactgattgtacgtaaaaa 43928139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 82 - 199
Target Start/End: Original strand, 12386507 - 12386627
Alignment:
Q  82 tttctcctatttatctc--tttccatctattttatcttatttccactttat-ccactaaattctctaaatcctcaaaacagccccacaacttaat-ttta 177  Q
    |||||||||||||| ||  |||| |||||||||||||||||||| |||| | |||| ||| ||||||||| | ||||||| |||| || || ||| ||||    
T  12386507 tttctcctatttatatcactttcaatctattttatcttatttcctctttttcccacaaaactctctaaattcacaaaacaacccctcatctcaatattta 12386606  T
Q  178 tttctattttcaagacttattc 199  Q
    ||| |||||||||  |||||||    
T  12386607 ttt-tattttcaaatcttattc 12386627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 40
Target Start/End: Original strand, 37428691 - 37428724
Alignment:
Q  7 ctcttggttcttctctcctcttgttctccctttt 40  Q
    ||||||||||||||||||||| ||||||||||||    
T  37428691 ctcttggttcttctctcctctagttctccctttt 37428724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 163 - 199
Target Start/End: Complemental strand, 13100588 - 13100552
Alignment:
Q  163 cacaacttaattttatttctattttcaagacttattc 199  Q
    ||||||||||| ||||||||||||||||| |||||||    
T  13100588 cacaacttaatcttatttctattttcaaggcttattc 13100552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 104 - 164
Target Start/End: Original strand, 14502246 - 14502305
Alignment:
Q  104 atctattttatcttatttccactttatccactaaattctctaaatcctcaaaacagcccca 164  Q
    ||||||||||||||||| ||||||   |||||||| ||||||||| | |||||||||||||    
T  14502246 atctattttatcttatt-ccacttataccactaaaatctctaaattcacaaaacagcccca 14502305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 157; Significance: 2e-83; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 7 - 199
Target Start/End: Complemental strand, 37793370 - 37793179
Alignment:
Q  7 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 106  Q
    ||||||||||||||||||| ||||||| |||||| | |||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  37793370 ctcttggttcttctctcctattgttcttcctttt-ctccaaaactggttgtacgtgaaaataattctaaacttagtttctcctatttatctcttcccatc 37793272  T
Q  107 tattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaacttaattttatttctattttcaagacttattc 199  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  37793271 tattttatcttatttccacttaatccactaaattctctaaatcctcaaaacagccccacaacttaatcttatttctattttcaagacttattc 37793179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 7 - 198
Target Start/End: Complemental strand, 16549978 - 16549784
Alignment:
Q  7 ctcttggttcttctctcctcttgttctc-cctttttccccaaaactggttgtacgtgaaaa-taattctaaacctagtttctcctatttatctctttcca 104  Q
    ||||||||||| |||| |||||||| || || ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||    
T  16549978 ctcttggttctcctcttctcttgttttctcccttttctccaaaactggttgtacgtgaaaaataattctaaacctagtttctcctatttatctcttccca 16549879  T
Q  105 tctattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaa-cttaattttatttctattttcaagacttatt 198  Q
    ||||||||||||||||||||||| |||||||||| ||||||||| ||||||| |||||||||| |||||| ||||||||||||||||||||||||    
T  16549878 tctattttatcttatttccacttaatccactaaactctctaaattctcaaaagagccccacaatcttaatcttatttctattttcaagacttatt 16549784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 7 - 198
Target Start/End: Original strand, 16615684 - 16615878
Alignment:
Q  7 ctcttggttcttctctcctcttgttctc-cctttttccccaaaactggttgtacgtgaaaa-taattctaaacctagtttctcctatttatctctttcca 104  Q
    ||||||||||| |||| |||||||| || || ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||    
T  16615684 ctcttggttctcctcttctcttgttttctcccttttctccaaaactggttgtacgtgaaaaataattctaaacctagtttctcctatttatctcttccca 16615783  T
Q  105 tctattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaa-cttaattttatttctattttcaagacttatt 198  Q
    ||||||||||||||||||||||| |||||||||| ||||||||| ||||||| |||||||||| |||||| ||||||||||||||||||||||||    
T  16615784 tctattttatcttatttccacttaatccactaaactctctaaattctcaaaagagccccacaatcttaatcttatttctattttcaagacttatt 16615878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 7 - 199
Target Start/End: Complemental strand, 14980648 - 14980457
Alignment:
Q  7 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 106  Q
    ||||||||||||||||||| ||| ||| |||||||| | ||||||||||||||||||||||||||| |||||||||||||||||||||||| || |||||    
T  14980648 ctcttggttcttctctccttttgctcttcctttttctcaaaaactggttgtacgtgaaaataattccaaacctagtttctcctatttatctattcccatc 14980549  T
Q  107 tattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaacttaattttatttctattttcaagacttattc 199  Q
    ||||||||||||||||||||| ||||||||||||||||||||   |||||||||||||||||||||| |||||| |||||||||  |||||||    
T  14980548 tattttatcttatttccacttaatccactaaattctctaaatttccaaaacagccccacaacttaatcttattt-tattttcaaatcttattc 14980457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 7 - 199
Target Start/End: Complemental strand, 15410124 - 15409933
Alignment:
Q  7 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 106  Q
    ||||||||||||||||||| ||| ||| |||||||| | ||||||||||||||||||||||||||| |||||||||||||||||||||||| || |||||    
T  15410124 ctcttggttcttctctccttttgctcttcctttttctcaaaaactggttgtacgtgaaaataattccaaacctagtttctcctatttatctattcccatc 15410025  T
Q  107 tattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaacttaattttatttctattttcaagacttattc 199  Q
    ||||||||||||||||||||| ||||||||||||||||||||   |||||||||||||||||||||| |||||| |||||||||  |||||||    
T  15410024 tattttatcttatttccacttaatccactaaattctctaaatttccaaaacagccccacaacttaatcttattt-tattttcaaatcttattc 15409933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 7 - 198
Target Start/End: Complemental strand, 29052155 - 29051960
Alignment:
Q  7 ctcttggttcttctctcctcttgttctccctttttcc--ccaaaactggttgtacgtgaaaa-taattctaaacctagtttctcctatttatctctttcc 103  Q
    ||||| ||||| |||| |||||||| || |||||| |  ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| ||    
T  29052155 ctcttagttctcctcttctcttgttttctcttttttctcccaaaactggttgtacgtgaaaaataattctaaacctaatttctcctatttatctcttccc 29052056  T
Q  104 atctattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaa-cttaattttatttctattttcaagacttatt 198  Q
    |||||||||||||||||||||||| |||||||||| ||||||||| |||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  29052055 atctattttatcttatttccacttaatccactaaactctctaaattctcaaaacagccccacaatcttaatcttatttctattttcaagacttatt 29051960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 7 - 190
Target Start/End: Original strand, 11091720 - 11091903
Alignment:
Q  7 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 106  Q
    |||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| || |||||||||||| |||||    
T  11091720 ctcttggttcttctctcctcttgttctccctttttctctaaaactggttgtacgtgaaaataattctaaacctagtttatcatatttatctcttcccatc 11091819  T
Q  107 tattttatcttatttccactttatccactaaattc-tctaaatcctcaaaacagccccacaacttaat-tttatttctattttcaa 190  Q
    ||||||||||||||||||||| ||||||||||||| ||||||| | ||||||||||||||| || ||| ||||||| |||||||||    
T  11091820 tattttatcttatttccacttaatccactaaattcttctaaattc-caaaacagccccacatctcaatatttattt-tattttcaa 11091903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 7 - 199
Target Start/End: Original strand, 38519757 - 38519948
Alignment:
Q  7 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 106  Q
    |||||||||||||||||||||||||||||||||| | ||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  38519757 ctcttggttcttctctcctcttgttctccctttt-ctccaaaactgattgtacgtgaaaataattctaaacctattttctcctatttatctcttcccatc 38519855  T
Q  107 tattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaacttaat-tttatttctattttcaagacttattc 199  Q
    ||||||||||||||||| ||||  |||| ||| ||||||||| ||||||||| |||| || || ||| ||||||| |||||||||  |||||||    
T  38519856 tattttatcttatttcctcttttcccacaaaactctctaaattctcaaaacaacccctcatctcaatatttattt-tattttcaaatcttattc 38519948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 8 - 190
Target Start/End: Original strand, 11085595 - 11085777
Alignment:
Q  8 tcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatct 107  Q
    ||||||||||||||||||||||||||||||||||| | |||| || ||||||||||||||||||||||||||||||| || |||||||||||| ||||||    
T  11085595 tcttggttcttctctcctcttgttctccctttttctctaaaattgattgtacgtgaaaataattctaaacctagtttatcatatttatctcttcccatct 11085694  T
Q  108 attttatcttatttccactttatccactaaattc-tctaaatcctcaaaacagccccacaacttaat-tttatttctattttcaa 190  Q
    |||||||||||||||||||| |||||| |||||| ||||||| | ||||||||||||||| || ||| ||||||| |||||||||    
T  11085695 attttatcttatttccacttaatccacaaaattcttctaaattc-caaaacagccccacatctcaatatttattt-tattttcaa 11085777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 7 - 199
Target Start/End: Complemental strand, 129919 - 129728
Alignment:
Q  7 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 106  Q
    ||||||||||| ||||||||||||| ||| |||||| ||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  129919 ctcttggttctcctctcctcttgttgtcc-tttttctccaaaactgattgtacgtgaaaataattctaaacctattttctcctatttatctcttcccatc 129821  T
Q  107 tattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaacttaat-tttatttctattttcaagacttattc 199  Q
    ||||||||||||||||| ||||  |||| ||| ||||||||| ||||||||| |||| || || ||| ||||||| |||||||||  |||||||    
T  129820 tattttatcttatttcctcttttcccacaaaactctctaaattctcaaaacaacccctcatctcaatatttattt-tattttcaaatcttattc 129728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 46 - 179
Target Start/End: Complemental strand, 17052694 - 17052561
Alignment:
Q  46 aaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatctattttatcttatttccactttatccactaaattctcta 145  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||  |||  ||||||||||||||||||||||| | |||| ||||||||||||    
T  17052694 aaaactggttgtacgtgaaaataattctatacctagtttctcctatttataacttctcatctattttatcttatttccacctaatcccctaaattctcta 17052595  T
Q  146 aatcctcaaaacagccccacaacttaattttatt 179  Q
    ||| |||||||||||||||||||||||| |||||    
T  17052594 aattctcaaaacagccccacaacttaatcttatt 17052561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 7 - 199
Target Start/End: Complemental strand, 11768068 - 11767876
Alignment:
Q  7 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 106  Q
    |||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||   ||||||||||| ||||||||||||||||||| |||||    
T  11768068 ctcttggttcttctctcctcttgttctccctttt-ctccaaaactggttgtacgtgaaaacttttctaaacctattttctcctatttatctcttcccatc 11767970  T
Q  107 tattttatcttatttccactttat-ccactaaattctctaaatcctcaaaacagccccacaacttaat-tttatttctattttcaagacttattc 199  Q
    ||||||||||||||||| |||| | |||| ||| ||||||||| || |||||| |||| || || ||| ||||||| |||||||||  |||||||    
T  11767969 tattttatcttatttcctctttttcccacaaaactctctaaattcttaaaacaacccctcatctcaatatttattt-tattttcaaatcttattc 11767876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 7 - 199
Target Start/End: Original strand, 14274406 - 14274598
Alignment:
Q  7 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 106  Q
    |||||||||||||||||||||||||||||||||| | |||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||| | |    
T  14274406 ctcttggttcttctctcctcttgttctccctttt-ctccaaaattggttgtacgtgaaaataattctaaacctagtttctcctatttatctc-ttcaacc 14274503  T
Q  107 tattttatcttatttccactttatccactaaattc-tctaaatcctcaaaacag-ccccacaa-cttaattttatttctattttcaagacttattc 199  Q
       |||||||||| || ||||  ||||||||  || ||||||| | |||||||| |||||||| |||||| |||||||||||||||||||||||||    
T  14274504 ctctttatcttatgtcgacttattccactaagctcttctaaattc-caaaacagcccccacaatcttaatcttatttctattttcaagacttattc 14274598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 7 - 128
Target Start/End: Original strand, 42462947 - 42463067
Alignment:
Q  7 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 106  Q
    ||||||||||| |||||||||||||||||||||| | ||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||  ||||    
T  42462947 ctcttggttctcctctcctcttgttctccctttt-ctccaaaactgattgtacgtgaaaataattctaaacctattttctcctatttatctcttctcatc 42463045  T
Q  107 tattttatcttatttccacttt 128  Q
    ||||||||||||||||| ||||    
T  42463046 tattttatcttatttcctcttt 42463067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 7 - 158
Target Start/End: Original strand, 16997166 - 16997314
Alignment:
Q  7 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 106  Q
    |||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| |   ||||||||||| ||||||||||||||||||| |||||    
T  16997166 ctcttggttcttctctcctcttgttctccctttt-ctccaaaactggttgtacgtgaatacttttctaaacctattttctcctatttatctcttcccatc 16997264  T
Q  107 tattttatcttatttccactttatccactaaattctctaaatcctcaaaaca 158  Q
    ||||||||||||||||| |||  ||||| ||| ||||||||| | |||||||    
T  16997265 tattttatcttatttcctctt--tccacaaaactctctaaattcacaaaaca 16997314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 30 - 156
Target Start/End: Complemental strand, 9032512 - 9032386
Alignment:
Q  30 ttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatctattttatcttatttccacttta 129  Q
    ||||||||||||| ||||||||| | ||||||||||||||||||||||||| ||||||||||||||||||  |||||||||||||||||||||| ||||     
T  9032512 ttctccctttttctccaaaactgatcgtacgtgaaaataattctaaacctattttctcctatttatctctccccatctattttatcttatttcctctttc 9032413  T
Q  130 tccactaaattctctaaatcctcaaaa 156  Q
     |||| ||||||||||||| |||||||    
T  9032412 cccacaaaattctctaaattctcaaaa 9032386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 7 - 199
Target Start/End: Complemental strand, 18455568 - 18455376
Alignment:
Q  7 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 106  Q
    |||||||||||||||||||||||||||||||||| | ||||| |||||||||||||||||||||||||||||||||| |||||||||||||| ||| | |    
T  18455568 ctcttggttcttctctcctcttgttctccctttt-ctccaaatctggttgtacgtgaaaataattctaaacctagttcctcctatttatctc-ttcaacc 18455471  T
Q  107 tattttatcttatttccactttatccactaaattc-tctaaatcctcaaaacag-ccccacaactt-aattttatttctattttcaagacttattc 199  Q
       |||||| |||||||| ||  | ||||||| || ||||||| | |||||||| ||||||||||| ||| |||||| ||||||||||||||||||    
T  18455470 ctctttatcatatttccatttatttcactaaactcttctaaattc-caaaacagcccccacaacttaaatcttatttatattttcaagacttattc 18455376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 15 - 158
Target Start/End: Complemental strand, 17016569 - 17016423
Alignment:
Q  15 tcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctag---tttctcctatttatctctttccatctattt 111  Q
    ||||||||||||||| |||| ||||||| |||||||||||||||||||||||  | ||| | | |||   ||||||||||||||||||| ||||||||||    
T  17016569 tcttctctcctcttgctctctctttttctccaaaactggttgtacgtgaaaactaatctga-cttaggtttttctcctatttatctcttcccatctattt 17016471  T
Q  112 tatcttatttccactttat-ccactaaattctctaaatcctcaaaaca 158  Q
    |||||||||||| |||| | |||| ||| ||||||||| | |||||||    
T  17016470 tatcttatttcctctttttcccacaaaactctctaaattcgcaaaaca 17016423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 7 - 163
Target Start/End: Complemental strand, 11524778 - 11524632
Alignment:
Q  7 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 106  Q
    |||||||||||  |||||||||||||||||||||| |||||||||| |||||||||||||   |||||||          |||||||||||||| |||||    
T  11524778 ctcttggttctcttctcctcttgttctcccttttt-cccaaaactgattgtacgtgaaaacttttctaaa----------cctatttatctcttcccatc 11524690  T
Q  107 tattttatcttatttccac-tttatccactaaattctctaaatcctcaaaacagcccc 163  Q
    ||||||||||||||||| | |||  |||| ||| ||||||||| ||||||||| ||||    
T  11524689 tattttatcttatttcctcttttccccacaaaactctctaaattctcaaaacaacccc 11524632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 7 - 166
Target Start/End: Complemental strand, 19485946 - 19485783
Alignment:
Q  7 ctcttggttcttctctcctcttgtt--ctcccttt-ttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctct-ttc 102  Q
    ||||||||||| |||| ||||||||  |||||||  ||  ||||||||| | ||||||||||||||||||||||||||||||||||||||||||||  ||    
T  19485946 ctcttggttctcctcttctcttgttttctcccttgattttccaaaactgatcgtacgtgaaaataattctaaacctagtttctcctatttatctctcctc 19485847  T
Q  103 catctattttatcttatttccactttatccactaaattc-tctaaatcctcaaaacagccccaca 166  Q
     ||| | |||||| ||||||| || | ||||||||| || ||||||| | | |||||||||||||    
T  19485846 aatccactttatcctatttcctctatttccactaaactcttctaaattc-ctaaacagccccaca 19485783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 38 - 121
Target Start/End: Complemental strand, 13848861 - 13848778
Alignment:
Q  38 ttttccccaaaactggttgtacgtgaaaataattctaaacctagt-ttctcctatttatctctttccatctattttatcttattt 121  Q
    ||||| |||||||||   |||||||||||||||||||| |||| | |||||||||||||||||||||||||||||||||||||||    
T  13848861 ttttctccaaaactgtacgtacgtgaaaataattctaa-cctattcttctcctatttatctctttccatctattttatcttattt 13848778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 9176813 - 9176738
Alignment:
Q  8 tcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtt 83  Q
    |||||||||||||||| ||||||||||||||||  ||||||| || ||||||||||||| | ||||||||||||||    
T  9176813 tcttggttcttctctcttcttgttctcccttttctcccaaaattgattgtacgtgaaaacatttctaaacctagtt 9176738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 128
Target Start/End: Original strand, 16092469 - 16092584
Alignment:
Q  15 tcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaaccta-----gtttctcctatttatctctttccatctat 109  Q
    ||||||||||||||||||||| ||||||||  ||||||||||||||| |||| ||  |||  || |     |||||||||||||||||||| ||||||||    
T  16092469 tcttctctcctcttgttctccttttttccc--aaactggttgtacgtaaaaaaaaa-ctattccgacttaggtttctcctatttatctcttcccatctat 16092565  T
Q  110 tttatcttatttccacttt 128  Q
    |||||||||| ||| ||||    
T  16092566 tttatcttatctcctcttt 16092584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 84 - 199
Target Start/End: Original strand, 12558077 - 12558193
Alignment:
Q  84 tctcctatttatctctt-tccatctattttatcttatttccactttatccactaaat-tctctaaatcctcaaaacagccccacaacttaattttatttc 181  Q
    |||||||||||| |||  || ||||||||||||||||| || |||| ||| | |||  ||||||||  || ||||||||||||| ||||||| |||||||    
T  12558077 tctcctatttatatctcctctatctattttatcttatt-cctctttttcccccaaaactctctaaaatcttaaaacagccccaccacttaatcttatttc 12558175  T
Q  182 tattttcaagacttattc 199  Q
    |||||||||  |||||||    
T  12558176 tattttcaaatcttattc 12558193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 110 - 163
Target Start/End: Original strand, 15203357 - 15203410
Alignment:
Q  110 tttatcttatttccactttatccactaaattctctaaatcctcaaaacagcccc 163  Q
    ||||||||||||| ||||  ||||||||| ||||||||| ||||||||||||||    
T  15203357 tttatcttatttctacttattccactaaactctctaaattctcaaaacagcccc 15203410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 110 - 180
Target Start/End: Complemental strand, 23461489 - 23461419
Alignment:
Q  110 tttatcttatttccactttatccactaaattctctaaatcctcaaaacagcccc-acaacttaattttattt 180  Q
    ||||||||||| ||||||  ||||||||| ||||||||| ||||||||| |||| |||||||||| ||||||    
T  23461489 tttatcttatt-ccacttattccactaaactctctaaattctcaaaacaacccccacaacttaatcttattt 23461419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 110 - 179
Target Start/End: Complemental strand, 8135106 - 8135037
Alignment:
Q  110 tttatcttatttccactttatccactaaattc-tctaaatcctcaaaacagccccacaacttaattttatt 179  Q
    |||||||||||||| ||| |||||||||| || ||||||| | |||||||||||| ||||||||| |||||    
T  8135106 tttatcttatttcctcttaatccactaaactcttctaaattc-caaaacagcccctcaacttaatattatt 8135037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 9724779 - 9724726
Alignment:
Q  7 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgt 61  Q
    |||||||||||||| || |||||||||||| ||||| | ||||||||||||||||    
T  9724779 ctcttggttcttctatcttcttgttctccc-ttttctcaaaaactggttgtacgt 9724726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 138
Target Start/End: Complemental strand, 8249170 - 8249077
Alignment:
Q  46 aaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctt-tccatctattttatcttatttccactttatccactaaa 138  Q
    ||||||| || ||||||||||   ||||||||||||||||  || | |||||||| || ||| |||||||||||||||| || | |||||||||    
T  8249170 aaaactgtttttacgtgaaaacttttctaaacctagtttcctctttatatctcttctcaatccattttatcttatttcctctatttccactaaa 8249077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 81 - 180
Target Start/End: Complemental strand, 40554413 - 40554314
Alignment:
Q  81 gtttctcctatttatctctttccatctattttatcttatttccactttatccactaaattc-tctaaatcctcaaaac-agccccacaacttaattttat 178  Q
    ||||||||||||||| |||| | ||||  ||||||||||||||||||  ||||||||| || ||||||| | |||||| | |||||||||||||| ||||    
T  40554413 gtttctcctatttatttctt-caatcttctttatcttatttccacttattccactaaactcttctaaattc-caaaacaacccccacaacttaatcttat 40554316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 106 - 138
Target Start/End: Complemental strand, 15095511 - 15095479
Alignment:
Q  106 ctattttatcttatttccactttatccactaaa 138  Q
    |||||||||||||||||||||| ||||||||||    
T  15095511 ctattttatcttatttccacttaatccactaaa 15095479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 151 - 199
Target Start/End: Original strand, 15117592 - 15117639
Alignment:
Q  151 tcaaaacagccccacaacttaattttatttctattttcaagacttattc 199  Q
    ||||||||||||||| ||||||| ||| ||||||| |||||||||||||    
T  15117592 tcaaaacagccccaccacttaatctta-ttctattatcaagacttattc 15117639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 113 - 199
Target Start/End: Original strand, 18008120 - 18008206
Alignment:
Q  113 atcttatttccactttatccactaaattc-tctaaatcctcaaaacag-ccccacaacttaattttatttctattttcaagacttattc 199  Q
    |||||||||||||||  ||||||||| || ||||||| || ||||||| |||||||||||||| |||||| |||||||||  |||||||    
T  18008120 atcttatttccacttattccactaaactcttctaaattct-aaaacagcccccacaacttaatcttattt-tattttcaaatcttattc 18008206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 157; Significance: 2e-83; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 7 - 199
Target Start/End: Complemental strand, 23079852 - 23079661
Alignment:
Q  7 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 106  Q
    ||||||||||||||||||||||||||||||||||| || |||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  23079852 ctcttggttcttctctcctcttgttctcccttttttcc-aaaagtggttgtacgtgaaaataattctaaacctagtttctcctatttatctcttcccatc 23079754  T
Q  107 tattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaacttaattttatttctattttcaagacttattc 199  Q
    ||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||| |||||||||||| ||||||||||||    
T  23079753 tattttatcttatttccacttaatccactaaattctctaaattctcaaaacagccccacaacttaatcttatttctatttccaagacttattc 23079661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 136; E-Value: 8e-71
Query Start/End: Original strand, 7 - 199
Target Start/End: Original strand, 27473530 - 27473714
Alignment:
Q  7 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 106  Q
    ||||||||||| |||||||||||||||||||||||| | |||||||        |||||||||||||||||||||||||||||||||||||||| |||||    
T  27473530 ctcttggttctcctctcctcttgttctccctttttctctaaaactg--------tgaaaataattctaaacctagtttctcctatttatctcttcccatc 27473621  T
Q  107 tattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaacttaattttatttctattttcaagacttattc 199  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  27473622 tattttatcttatttcaacttaatccactaaattctctaaatcctcaaaacagccccacaacttaatcttatttctattttcaagacttattc 27473714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 7 - 198
Target Start/End: Complemental strand, 18357954 - 18357760
Alignment:
Q  7 ctcttggttcttctctcctcttgttctc-cctttttccccaaaactggttgtacgtgaaaa-taattctaaacctagtttctcctatttatctctttcca 104  Q
    |||||| |||| |||| |||||||| || || ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||    
T  18357954 ctcttgattctcctcttctcttgttttctcccttttctccaaaactggttgtacgtgaaaaataattctaaacctagtttctcctatttatctcttccca 18357855  T
Q  105 tctattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaa-cttaattttatttctattttcaagacttatt 198  Q
    ||||||||||||||||||||||| |||||||||| ||||||||| |||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  18357854 tctattttatcttatttccacttaatccactaaactctctaaattctcaaaacagccccacaatcttaatcttatttctattttcaagacttatt 18357760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 7 - 198
Target Start/End: Complemental strand, 21080942 - 21080748
Alignment:
Q  7 ctcttggttcttctctcctcttgttctc-cctttttccccaaaactggttgtacgtgaaaa-taattctaaacctagtttctcctatttatctctttcca 104  Q
    ||||||||| | |||| |||||||| || || ||||| |||||||||| |||||||||||| || ||||||||||||||||||||||||||||||| |||    
T  21080942 ctcttggttgtcctcttctcttgttttctcccttttctccaaaactggatgtacgtgaaaaatatttctaaacctagtttctcctatttatctcttccca 21080843  T
Q  105 tctattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaa-cttaattttatttctattttcaagacttatt 198  Q
    ||||||||||||||||||||||| |||||||||| ||||||||| |||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  21080842 tctattttatcttatttccacttaatccactaaactctctaaattctcaaaacagccccacaatcttaatcttatttctattttcaagacttatt 21080748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 7 - 198
Target Start/End: Original strand, 21915703 - 21915897
Alignment:
Q  7 ctcttggttcttctctcctcttgttctc-cctttttccccaaaactggttgtacgtgaaaa-taattctaaacctagtttctcctatttatctctttcca 104  Q
    ||||||||||| ||||  ||||||| || || ||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||| |||    
T  21915703 ctcttggttctcctcttatcttgttttctcccttttctccaaaactggttgtacgtgaaaaataattataaacctagtttctcctatttatctcttccca 21915802  T
Q  105 tctattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaa-cttaattttatttctattttcaagacttatt 198  Q
    ||||||||||||||||||||||| |||||||||| ||||||||| ||||||||||||| |||| |||||| ||||||||||||||||||||||||    
T  21915803 tctattttatcttatttccacttgatccactaaactctctaaattctcaaaacagccctacaatcttaatcttatttctattttcaagacttatt 21915897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 38 - 198
Target Start/End: Original strand, 25184300 - 25184462
Alignment:
Q  38 ttttccccaaaactggttgtacgtgaaaa-taattctaaacctagtttctcctatttatctctttccatctattttatcttatttccactttatccacta 136  Q
    ||||| ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||| ||||||||    
T  25184300 ttttctccaaaactggttgtacgtgaaaaataattctaaacctaatttctcctatttatctcttcccatctattttatcttatttccacttaatccacta 25184399  T
Q  137 aattctctaaatcctcaaaacagccccacaa-cttaattttatttctattttcaagacttatt 198  Q
    || ||||||||| |||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  25184400 aactctctaaattctcaaaacagccccacaatcttaatcttatttctattttcaagacttatt 25184462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 7 - 198
Target Start/End: Original strand, 357960 - 358155
Alignment:
Q  7 ctcttggttcttctctcctcttgtt--ctccctttttccccaaaactggttgtacgtgaaaa-taattctaaacctagtttctcctatttatctctttcc 103  Q
    ||||||||||| |||| ||||||||  ||||| ||||| ||||||||| ||||||||||||| ||||| |||||||||||| ||||||||||||||| ||    
T  357960 ctcttggttctcctcttctcttgttttctccccttttctccaaaactgattgtacgtgaaaaataattataaacctagtttttcctatttatctcttccc 358059  T
Q  104 atctattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaa-cttaattttatttctattttcaagacttatt 198  Q
    |||||||||||||||||||||||| |||||||||| ||||||||| || ||||||||||||||| |||||| ||||||||||||||||||||||||    
T  358060 atctattttatcttatttccacttaatccactaaactctctaaattcttaaaacagccccacaatcttaatcttatttctattttcaagacttatt 358155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 38 - 199
Target Start/End: Original strand, 22502105 - 22502268
Alignment:
Q  38 ttttccccaaaactggttgtacgtgaaaa-taattctaaacctagtttctcctatttatctctttccatctattttatcttatttccactttatccacta 136  Q
    ||||| ||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||    
T  22502105 ttttctccaaaactggttgtacgtgaaaaataattctaaacatagtttctcctatttatctcttcccatctattttatcttatttccacttaatccacta 22502204  T
Q  137 aattctctaaatcctcaaaacagccccacaa-cttaattttatttctattttcaagacttattc 199  Q
    || ||| ||||| |||||||||||||||||| |||||| |||||||||||||||||||||||||    
T  22502205 aactctttaaattctcaaaacagccccacaatcttaatcttatttctattttcaagacttattc 22502268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 38 - 199
Target Start/End: Original strand, 22510039 - 22510202
Alignment:
Q  38 ttttccccaaaactggttgtacgtgaaaa-taattctaaacctagtttctcctatttatctctttccatctattttatcttatttccactttatccacta 136  Q
    ||||| ||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||    
T  22510039 ttttctccaaaactggttgtacgtgaaaaataattctaaacatagtttctcctatttatctcttcccatctattttatcttatttccacttaatccacta 22510138  T
Q  137 aattctctaaatcctcaaaacagccccacaa-cttaattttatttctattttcaagacttattc 199  Q
    || ||| ||||| |||||||||||||||||| |||||| |||||||||||||||||||||||||    
T  22510139 aactctttaaattctcaaaacagccccacaatcttaatcttatttctattttcaagacttattc 22510202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 38 - 198
Target Start/End: Complemental strand, 12626344 - 12626182
Alignment:
Q  38 ttttccccaaaactggttgtacgtgaaaa-taattctaaacctagtttctcctatttatctctttccatctattttatcttatttccactttatccacta 136  Q
    ||||| |||||| || ||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| ||||||||    
T  12626344 ttttctccaaaattgattgtacgtgaaaaataattctaaacctagtttctcctatttatctcttcccatctattttatcttattttcacttaatccacta 12626245  T
Q  137 aattctctaaatcctcaaaacagccccacaa-cttaattttatttctattttcaagacttatt 198  Q
    || | ||||||| ||||||||| |||||||| |||||| ||||||||||||||||||||||||    
T  12626244 aactttctaaattctcaaaacaaccccacaatcttaatcttatttctattttcaagacttatt 12626182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 56 - 163
Target Start/End: Original strand, 27845684 - 27845792
Alignment:
Q  56 gtacgtgaaaataattctaaacctagtttctcctatttatctctttccatctattttatcttatttccactttatc-cactaaattctctaaatcctcaa 154  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||| |||||||||||||||||||||| |||| || ||| ||| ||||||||| |||||    
T  27845684 gtacgtgaaaataattctaaacctattttctccgatttatctcttcccatctattttatcttatttcctctttttctcacaaaactctctaaattctcaa 27845783  T
Q  155 aacagcccc 163  Q
    |||| ||||    
T  27845784 aacaacccc 27845792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 7 - 163
Target Start/End: Complemental strand, 43946497 - 43946337
Alignment:
Q  7 ctcttggttcttctctcctcttg----ttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttc 102  Q
    ||||||||||||| || ||||||    ||||||||||||| |||||||||   |||||| |||| |||||||| | || ||||||||||||||||||| |    
T  43946497 ctcttggttcttcccttctcttgacttttctccctttttctccaaaactgaacgtacgttaaaaaaattctaa-catattttctcctatttatctcttcc 43946399  T
Q  103 catctattttatcttatttccactttat-ccactaaattctctaaatcctcaaaacagcccc 163  Q
    ||||||||||||||||||||| |||| | |||| ||| ||||||||| ||||||||| ||||    
T  43946398 catctattttatcttatttcctctttttcccacaaaactctctaaattctcaaaacaacccc 43946337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 7 - 163
Target Start/End: Complemental strand, 18546122 - 18545966
Alignment:
Q  7 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagt-ttctcctatttatctctttccat 105  Q
    |||||||||||  ||||||||||||||||||||| | |||||| ||||||||||||||||   |||||| |||| | ||||||||||||||| || ||||    
T  18546122 ctcttggttctcttctcctcttgttctccctttt-ctccaaaagtggttgtacgtgaaaacttttctaa-cctattattctcctatttatctattcccat 18546025  T
Q  106 ctattttatcttatttccactttat-ccactaaattctctaaatcctcaaaacagcccc 163  Q
    |||||||||||||||||| |||| | |||  ||| ||||||||| ||||||||| ||||    
T  18546024 ctattttatcttatttcctctttttcccataaaactctctaaattctcaaaacaacccc 18545966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 109 - 191
Target Start/End: Original strand, 22704201 - 22704283
Alignment:
Q  109 ttttatcttatttccactttatccactaaattctctaaatcctcaaaacag-ccccacaacttaattttatttctattttcaag 191  Q
    |||||||||||||||||||  ||||||||| ||||||||| |||||||||| |||||||||||||| |||||| ||||||||||    
T  22704201 ttttatcttatttccacttattccactaaactctctaaattctcaaaacagcccccacaacttaatcttattt-tattttcaag 22704283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 110 - 199
Target Start/End: Complemental strand, 24833895 - 24833807
Alignment:
Q  110 tttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaacttaattttatttctattttcaagacttattc 199  Q
    ||||||||||||||||||  ||||||||| ||||||||| |||||||||||||| || || ||| |||||| |||||||||  |||||||    
T  24833895 tttatcttatttccacttattccactaaactctctaaattctcaaaacagcccctcatctcaatgttattt-tattttcaaatcttattc 24833807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 82 - 199
Target Start/End: Original strand, 26393476 - 26393594
Alignment:
Q  82 tttctcctatttatctctttccatctattttatcttatttccac-tttatccactaaattctctaaatcctcaaaacagccccacaacttaat-tttatt 179  Q
    ||||||||||||||||||| ||||||| |||||||||||||| | ||| ||||| ||| ||||||||  ||||||||| |||| || || ||| ||||||    
T  26393476 tttctcctatttatctcttcccatctactttatcttatttcctcttttttccacaaaactctctaaaatctcaaaacaacccctcatctcaatatttatt 26393575  T
Q  180 tctattttcaagacttattc 199  Q
    | |||||||||  |||||||    
T  26393576 t-tattttcaaatcttattc 26393594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 74 - 199
Target Start/End: Original strand, 21115828 - 21115953
Alignment:
Q  74 aaacctagtttctcctatttatctctttccatctattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaacttaat 173  Q
    ||||||| ||||||||||||||||||| | |||||||||||||||||||  ||||   ||| ||| ||||||||| ||||| ||| |||| || || |||    
T  21115828 aaacctattttctcctatttatctcttccgatctattttatcttatttcttcttttcgcacaaaactctctaaattctcaacacaacccctcatctcaat 21115927  T
Q  174 -tttatttctattttcaagacttattc 199  Q
     ||||||| |||||||||  |||||||    
T  21115928 atttattt-tattttcaaatcttattc 21115953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 7 - 66
Target Start/End: Complemental strand, 39827173 - 39827115
Alignment:
Q  7 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaa 66  Q
    ||||||||| |||||||||||||||||||| ||| | | |||||||||||||||||||||    
T  39827173 ctcttggttattctctcctcttgttctccc-tttcctcaaaaactggttgtacgtgaaaa 39827115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 10 - 190
Target Start/End: Complemental strand, 24792731 - 24792553
Alignment:
Q  10 ttggttcttctctcctcttgttctc-cctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatcta 108  Q
    ||||||||||||| |||||||| || || ||||| |||||||| |||  |||| ||||  ||||| | |||| |||||||||||||| |||| | | |      
T  24792731 ttggttcttctcttctcttgttttctcccttttctccaaaacttgtttcacgtaaaaactattctga-cctattttctcctatttatttctt-caaccct 24792634  T
Q  109 ttttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaacttaattttatttctattttcaa 190  Q
     ||||||||||||||||||  || |||||| |||||||||  |||||||||| || || || ||| |||||| |||||||||    
T  24792633 ctttatcttatttccacttattcaactaaactctctaaattttcaaaacagctcctcatctcaatgttattt-tattttcaa 24792553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 77 - 171
Target Start/End: Original strand, 3539988 - 3540081
Alignment:
Q  77 cctagtttctcctatttatctctttccatctattttatcttatttccactttatccactaaattc-tctaaatcctcaaaacagccccacaactta 171  Q
    |||||||| |||||||||| || | | | ||| |||||||||||||||||| |||||||||| || ||||||| | |||||||||||| |||||||    
T  3539988 cctagtttttcctatttatttcct-caacctactttatcttatttccacttaatccactaaactcttctaaattc-caaaacagcccctcaactta 3540081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 110 - 199
Target Start/End: Original strand, 14694507 - 14694596
Alignment:
Q  110 tttatcttatttccactttatccactaaattc-tctaaatcctcaaaacag-ccccacaacttaattttatttctattttcaagacttattc 199  Q
    ||||||||||||||||||  ||||||||| || ||||||| |||||||||| |||||||||||||| |||| | |||||||||  |||||||    
T  14694507 tttatcttatttccacttattccactaaactcttctaaat-ctcaaaacagcccccacaacttaatcttatat-tattttcaaatcttattc 14694596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 110 - 199
Target Start/End: Original strand, 25046300 - 25046389
Alignment:
Q  110 tttatcttatttccactttatccactaaattc-tctaaatcctcaaaacag-ccccacaacttaattttatttctattttcaagacttattc 199  Q
    ||||||||||||||||||  |||||||||||| ||||||| | |||| ||| |||||||||||||| |||||| |||||||||  |||||||    
T  25046300 tttatcttatttccacttattccactaaattcttctaaattc-caaagcagcccccacaacttaatcttattt-tattttcaaatcttattc 25046389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 110 - 175
Target Start/End: Original strand, 22260229 - 22260294
Alignment:
Q  110 tttatcttatttccactttatccactaaa-ttctctaaatcctcaaaacagccccacaacttaattt 175  Q
    |||||||||||||||||| |||||||||| || ||||| | | |||||||||||| |||||||||||    
T  22260229 tttatcttatttccacttaatccactaaacttttctaatttc-caaaacagcccctcaacttaattt 22260294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 93 - 190
Target Start/End: Complemental strand, 24688342 - 24688246
Alignment:
Q  93 tatctctttccatctattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaacttaat-tttatttctattttcaa 190  Q
    |||||||| ||||||||||||||||| |||| ||||  |||| ||| ||||||||  ||||||||| |||| ||||| ||| ||||||| |||||||||    
T  24688342 tatctcttcccatctattttatctta-ttcctcttttcccacaaaactctctaaaatctcaaaacaacccctcaactcaatatttattt-tattttcaa 24688246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 171
Target Start/End: Original strand, 44072742 - 44072803
Alignment:
Q  110 tttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaactta 171  Q
    |||||||||||||||||| |||||||||| |||   |||  ||||||||||||| |||||||    
T  44072742 tttatcttatttccacttaatccactaaactcttctaattttcaaaacagcccctcaactta 44072803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 151 - 199
Target Start/End: Complemental strand, 22458514 - 22458467
Alignment:
Q  151 tcaaaacagccccacaacttaattttatttctattttcaagacttattc 199  Q
    ||||||||||||||| ||||||| ||| ||||||| |||||||||||||    
T  22458514 tcaaaacagccccaccacttaatctta-ttctattatcaagacttattc 22458467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 93 - 169
Target Start/End: Complemental strand, 24685066 - 24684991
Alignment:
Q  93 tatctctttccatctattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaact 169  Q
    |||||||| ||||||||||||||||| |||| ||||  |||| ||| ||||||||  ||||||||| |||| |||||    
T  24685066 tatctcttcccatctattttatctta-ttcctcttttcccacaaaactctctaaaatctcaaaacaacccctcaact 24684991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 153; Significance: 5e-81; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 7 - 199
Target Start/End: Complemental strand, 15684614 - 15684422
Alignment:
Q  7 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 106  Q
    ||||||||| |||||| |||||||||||||||||| |  ||||||||||||| ||||||||||||||||||||| ||||| ||||||||||||| |||||    
T  15684614 ctcttggtttttctcttctcttgttctcccttttttcttaaaactggttgtatgtgaaaataattctaaacctaatttcttctatttatctcttcccatc 15684515  T
Q  107 tattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaacttaattttatttctattttcaagacttattc 199  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15684514 tattttatcttatttccacttaatccactaaattctctaaatcctcaaaacagccccacaacttaattttatttctattttcaagacttattc 15684422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 7 - 198
Target Start/End: Complemental strand, 15900627 - 15900433
Alignment:
Q  7 ctcttggttcttctctcctcttgttctc-cctttttccccaaaactggttgtacgtgaaaa-taattctaaacctagtttctcctatttatctctttcca 104  Q
    ||||||||||| |||| |||||||| || || ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||    
T  15900627 ctcttggttctcctcttctcttgttttctcccttttctccaaaactggttgtacgtgaaaaataattctaaacctagtttctcctatttatctcttccca 15900528  T
Q  105 tctattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaa-cttaattttatttctattttcaagacttatt 198  Q
    ||||||||||||||||||||||| |||||| ||| |||||||||  ||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  15900527 tctattttatcttatttccacttaatccaccaaactctctaaattttcaaaacagccccacaatcttaatcttatttctattttcaagacttatt 15900433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 7 - 198
Target Start/End: Complemental strand, 15173426 - 15173232
Alignment:
Q  7 ctcttggttcttctctcctcttgttctc-cctttttccccaaaactggttgtacgtgaaaa-taattctaaacctagtttctcctatttatctctttcca 104  Q
    ||||||||||| |||| |||||||| || || ||||| |||||||| |||||||||||||| |||||||||||||||||||||||||| ||||| | |||    
T  15173426 ctcttggttctcctcttctcttgttttctcccttttctccaaaacttgttgtacgtgaaaaataattctaaacctagtttctcctattaatctcatccca 15173327  T
Q  105 tctattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaa-cttaattttatttctattttcaagacttatt 198  Q
    ||||||||||||||||||||||| || ||||||| ||||||||| |||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  15173326 tctattttatcttatttccacttaattcactaaactctctaaattctcaaaacagccccacaatcttaatcttatttctattttcaagacttatt 15173232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 70 - 198
Target Start/End: Complemental strand, 23664965 - 23664836
Alignment:
Q  70 ttctaaacctagtttctcctatttatctctttccatctattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaa-c 168  Q
    ||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||| |||||||||| ||||||||| |||||||||||||||||| |    
T  23664965 ttctaaacctagtttctcctatttatctcctctcatctattttatcttatttccacttaatccactaaactctctaaattctcaaaacagccccacaatc 23664866  T
Q  169 ttaattttatttctattttcaagacttatt 198  Q
    ||||| ||||||||||||||||||||||||    
T  23664865 ttaatcttatttctattttcaagacttatt 23664836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 7 - 163
Target Start/End: Original strand, 18707255 - 18707410
Alignment:
Q  7 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 106  Q
    ||||||||||||||||||||||||| |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||  || |||||    
T  18707255 ctcttggttcttctctcctcttgttttccctttt-ctccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatcatttcccatc 18707353  T
Q  107 tattttatcttatttccactttatccactaaattctctaaatcctcaaaacagcccc 163  Q
    |||||||||||||||||  |   ||||| ||| ||||||||| | ||||||||||||    
T  18707354 tattttatcttatttcctttaattccacaaaactctctaaattcacaaaacagcccc 18707410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 10 - 163
Target Start/End: Original strand, 18454205 - 18454357
Alignment:
Q  10 ttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatctat 109  Q
    |||||||| |||||||||||||||||||||| | ||||||||  ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||    
T  18454205 ttggttctcctctcctcttgttctccctttt-ctccaaaacttattgtacgtgaaaataattctaaacctattttctcctatttatctcttcccatctat 18454303  T
Q  110 tttatcttatttccactttatccactaaattctctaaatcctcaaaacagcccc 163  Q
    || ||||||||||| ||||  |||| ||| ||||||||| ||||||||| ||||    
T  18454304 ttaatcttatttcctcttttcccacaaaactctctaaattctcaaaacaacccc 18454357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 7 - 123
Target Start/End: Original strand, 18697504 - 18697619
Alignment:
Q  7 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 106  Q
    |||||||||||||||||||| ||||||||| ||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||    
T  18697504 ctcttggttcttctctcctcctgttctccccttt-ctccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatcacttcccatc 18697602  T
Q  107 tattttatcttatttcc 123  Q
    |||||||||||||||||    
T  18697603 tattttatcttatttcc 18697619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 7 - 158
Target Start/End: Original strand, 20137647 - 20137799
Alignment:
Q  7 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagttt-ctcctatttatctctttccat 105  Q
    |||||||||||||||| |||||||||||||||||  || |||| || |||| |||||||| ||||||||||||||||| |||||||||||||||| ||||    
T  20137647 ctcttggttcttctcttctcttgttctcccttttctccaaaaattgattgttcgtgaaaacaattctaaacctagttttctcctatttatctcttcccat 20137746  T
Q  106 ctattttatcttatttccactttatccactaaattctctaaatcctcaaaaca 158  Q
    |||||||||||||||||| |||| ||||| ||| ||||||||| |||||||||    
T  20137747 ctattttatcttatttcctctttttccacaaaactctctaaattctcaaaaca 20137799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 7 - 158
Target Start/End: Complemental strand, 22195222 - 22195070
Alignment:
Q  7 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagttt-ctcctatttatctctttccat 105  Q
    |||||||||||||||| |||||||||||||||||  || |||| || |||| |||||||| ||||||||||||||||| |||||||||||||||| ||||    
T  22195222 ctcttggttcttctcttctcttgttctcccttttctccaaaaattgattgttcgtgaaaacaattctaaacctagttttctcctatttatctcttcccat 22195123  T
Q  106 ctattttatcttatttccactttatccactaaattctctaaatcctcaaaaca 158  Q
    |||||||||||||||||| |||| ||||| ||| ||||||||| |||||||||    
T  22195122 ctattttatcttatttcctctttttccacaaaactctctaaattctcaaaaca 22195070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 7 - 199
Target Start/End: Complemental strand, 17229042 - 17228852
Alignment:
Q  7 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 106  Q
    |||||| ||||||||||||||||||||||||||| | |||||| || |||||||||||||   ||||||||||| ||||||||||||||||||| |||||    
T  17229042 ctcttgattcttctctcctcttgttctccctttt-ctccaaaattgattgtacgtgaaaaactttctaaacctattttctcctatttatctcttcccatc 17228944  T
Q  107 tattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaacttaat-tttatttctattttcaagacttattc 199  Q
    ||||||||||||||||| ||||  |||| ||| ||||||||| ||||||||| |||| || || ||| ||||||| |||||||||  |||||||    
T  17228943 tattttatcttatttcctcttt-cccacaaaactctctaaattctcaaaacaacccctcatctcaatatttattt-tattttcaaatcttattc 17228852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 7 - 163
Target Start/End: Complemental strand, 23527278 - 23527122
Alignment:
Q  7 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 106  Q
    ||||||||||||||||||||||||||||||||||  || ||||||| |||||||| |||| |||||||| |||| |||||||||||||||||||||||||    
T  23527278 ctcttggttcttctctcctcttgttctcccttttctccaaaaactgattgtacgtaaaaacaattctaa-cctattttctcctatttatctctttccatc 23527180  T
Q  107 tattttatcttatttcc-actttatccactaaattctctaaatcctcaaaacagcccc 163  Q
    |||||||||||||||||  ||||  |||| ||| ||||||||| | ||||||| ||||    
T  23527179 tattttatcttatttcctcctttccccacaaaactctctaaattcacaaaacaacccc 23527122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 103 - 199
Target Start/End: Complemental strand, 15816533 - 15816437
Alignment:
Q  103 catctattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaacttaattttatttctattttcaagacttattc 199  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||  |||||||    
T  15816533 catctattttatcttatttccacttaatccactaaattctctaaatcctcaaaacagccccacaacttaatcttatttctattttcaaatcttattc 15816437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 7 - 163
Target Start/End: Complemental strand, 22792409 - 22792248
Alignment:
Q  7 ctcttggttcttctctcctcttg----ttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttc 102  Q
    ||||||||||||| || ||||||    |||||| |||||| ||||||||| | |||||||||||   ||||||||||| |||||| |||||||||||| |    
T  22792409 ctcttggttcttcccttctcttgacttttctccatttttctccaaaactgatcgtacgtgaaaacttttctaaacctattttctcatatttatctcttcc 22792310  T
Q  103 catctattttatcttatttccactttat-ccactaaattctctaaatcctcaaaacagcccc 163  Q
    ||||||||||||||||||||| |||| | |||| ||| ||||||||| ||||||||| ||||    
T  22792309 catctattttatcttatttcctctttttcccacaaaactctctaaattctcaaaacaacccc 22792248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 30 - 199
Target Start/End: Complemental strand, 18895433 - 18895264
Alignment:
Q  30 ttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatctattttatcttatttccacttta 129  Q
    |||| |||||||| |||||||||  ||||||| ||||   ||||||||||| | |||||||||||||| || ||||||| |||||||||||||| ||||     
T  18895433 ttcttcctttttctccaaaactgaatgtacgttaaaacttttctaaacctattctctcctatttatcttttcccatcta-tttatcttatttcctctttt 18895335  T
Q  130 t-ccactaaattctctaaatcctcaaaacagccccacaacttaat-tttatttctattttcaagacttattc 199  Q
    | |||| ||| ||||||||| ||||||||| |||| || |||||| ||||||| |||||||||  |||||||    
T  18895334 tcccacaaaaatctctaaattctcaaaacaacccctcatcttaatatttattt-tattttcaaatcttattc 18895264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 8 - 199
Target Start/End: Original strand, 23077697 - 23077890
Alignment:
Q  8 tcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtt-tctcctatttatctct-ttccat 105  Q
    |||||||||||||||| ||||||||||||||||  ||||||| || |||||||||||||   || ||||||||||| || ||||||||| |||  || ||    
T  23077697 tcttggttcttctctcttcttgttctcccttttctcccaaaagtgattgtacgtgaaaacttttttaaacctagttctcacctatttatatctcctctat 23077796  T
Q  106 ctattttatcttatttccactttat-ccactaaattctctaaatcctcaaaacagccccacaacttaat-tttatttctattttcaagacttattc 199  Q
    ||||| ||||||| |||| |||| | |||| ||| ||||||||| | |||||||||||| || || ||| ||||||| |||||||||  |||||||    
T  23077797 ctattctatctta-ttcctctttttcccacaaaactctctaaattcacaaaacagcccctcatctcaatatttattt-tattttcaaatcttattc 23077890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 56 - 128
Target Start/End: Original strand, 19363492 - 19363563
Alignment:
Q  56 gtacgtgaaaataattctaaacctagtttctcctatttatctctttccatctattttatcttatttccacttt 128  Q
    |||||||||||||||||||| |||| ||  ||||||||||||||| |||||||||||||||||||||| ||||    
T  19363492 gtacgtgaaaataattctaa-cctatttcttcctatttatctcttcccatctattttatcttatttcctcttt 19363563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 110 - 199
Target Start/End: Original strand, 20183906 - 20183995
Alignment:
Q  110 tttatcttatttccactttatccactaaattctctaaatcctcaaaac-agccccacaacttaattttatttctattttcaagacttattc 199  Q
    ||||||||||||||||||  ||||||||| ||||||||| |||||||| | |||||||||||||| |||||| |||||||||  |||||||    
T  20183906 tttatcttatttccacttattccactaaactctctaaattctcaaaacaacccccacaacttaatcttattt-tattttcaaatcttattc 20183995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 110 - 199
Target Start/End: Complemental strand, 22152085 - 22151996
Alignment:
Q  110 tttatcttatttccactttatccactaaattctctaaatcctcaaaac-agccccacaacttaattttatttctattttcaagacttattc 199  Q
    ||||||||||||||||||  ||||||||| ||||||||| |||||||| | |||||||||||||| |||||| |||||||||  |||||||    
T  22152085 tttatcttatttccacttattccactaaactctctaaattctcaaaacaacccccacaacttaatcttattt-tattttcaaatcttattc 22151996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 109 - 199
Target Start/End: Complemental strand, 23076322 - 23076233
Alignment:
Q  109 ttttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaacttaattttatttctattttcaagacttattc 199  Q
    |||||||||||||||||||  ||||||||| ||||||||| |||||||||||||| || || ||| |||||| |||||||||  |||||||    
T  23076322 ttttatcttatttccacttattccactaaactctctaaattctcaaaacagcccctcatctcaatattattt-tattttcaaatcttattc 23076233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 110 - 199
Target Start/End: Original strand, 611986 - 612074
Alignment:
Q  110 tttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaacttaattttatttctattttcaagacttattc 199  Q
    ||||||||||||||||||  ||||||||| ||||||||| |||||||||||||| || || ||| |||||| |||||||||  |||||||    
T  611986 tttatcttatttccacttattccactaaactctctaaattctcaaaacagcccctcatctcaatattattt-tattttcaaatcttattc 612074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 83
Target Start/End: Original strand, 35012135 - 35012210
Alignment:
Q  8 tcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtt 83  Q
    |||||||||||||||| ||||||||||||||||  ||||||| || ||||| |||||||   ||||||||||||||    
T  35012135 tcttggttcttctctcttcttgttctcccttttctcccaaaattgattgtatgtgaaaacttttctaaacctagtt 35012210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 23539903 - 23539957
Alignment:
Q  7 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgt 61  Q
    ||||||||||| |||| ||||||||||||||||||| ||||||||| ||||||||    
T  23539903 ctcttggttctcctcttctcttgttctccctttttctccaaaactgcttgtacgt 23539957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 110 - 199
Target Start/End: Original strand, 19401276 - 19401364
Alignment:
Q  110 tttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaacttaattttatttctattttcaagacttattc 199  Q
    ||||||||||||||||||  ||||||||| |||||||||  ||||||||||||| || || ||| |||||| |||||||||  |||||||    
T  19401276 tttatcttatttccacttattccactaaactctctaaattttcaaaacagcccctcatctcaatattattt-tattttcaaatcttattc 19401364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 82 - 122
Target Start/End: Original strand, 20225016 - 20225056
Alignment:
Q  82 tttctcctatttatctctttccatctattttatcttatttc 122  Q
    ||||||||||||||||||| |||||||||||||||||||||    
T  20225016 tttctcctatttatctcttcccatctattttatcttatttc 20225056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 82 - 122
Target Start/End: Original strand, 22119000 - 22119040
Alignment:
Q  82 tttctcctatttatctctttccatctattttatcttatttc 122  Q
    ||||||||||||||||||| |||||||||||||||||||||    
T  22119000 tttctcctatttatctcttcccatctattttatcttatttc 22119040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 82 - 199
Target Start/End: Original strand, 33444118 - 33444238
Alignment:
Q  82 tttctcctatttat--ctctttccatctattttatcttatttccactttat-ccactaaattctctaaatcctcaaaacagccccacaacttaat-ttta 177  Q
    ||||||||||||||  ||||| |||||||||||||||||||||| |||| | |||| ||| ||||||||  ||||||||| |||| || || ||| ||||    
T  33444118 tttctcctatttatatctcttcccatctattttatcttatttcctctttttcccacaaaactctctaaaatctcaaaacaacccctcatctcaatattta 33444217  T
Q  178 tttctattttcaagacttattc 199  Q
    ||| |||||||||  |||||||    
T  33444218 ttt-tattttcaaatcttattc 33444238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 110 - 163
Target Start/End: Complemental strand, 18259053 - 18259000
Alignment:
Q  110 tttatcttatttccactttatccactaaattctctaaatcctcaaaacagcccc 163  Q
    ||||||||||||||||||  | ||||||| ||||||||| ||||||||||||||    
T  18259053 tttatcttatttccacttatttcactaaactctctaaattctcaaaacagcccc 18259000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 8 - 162
Target Start/End: Complemental strand, 22375775 - 22375621
Alignment:
Q  8 tcttggttcttctctcctcttgtt--ctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccat 105  Q
    ||||||||||||||| ||||||||  ||||||||||| |||||||| |||  |||| ||||  ||||| | | || |||||||||||||| ||  ||       
T  22375775 tcttggttcttctcttctcttgttttctccctttttctccaaaacttgtttcacgtaaaaactattctga-cttattttctcctatttat-tccctcagc 22375678  T
Q  106 ctattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccc 162  Q
    |   ||||||||||||||||||  ||||||||| |||||||||  ||||||||||||    
T  22375677 cctctttatcttatttccacttattccactaaactctctaaattgtcaaaacagccc 22375621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338 (Bit Score: 150; Significance: 3e-79; HSPs: 3)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 7 - 199
Target Start/End: Original strand, 310 - 502
Alignment:
Q  7 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 106  Q
    |||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  310 ctcttggttcttctctcctcttgttctccctttt-ctccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctcttcccatc 408  T
Q  107 tattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaa-cttaattttatttctattttcaagacttattc 199  Q
    |||||||||||||| |||||| |||||||||| ||||||||| |||||||||||||||||| |||||| |||||||||||||||||||||||||    
T  409 tattttatcttattgccacttaatccactaaactctctaaattctcaaaacagccccacaatcttaatcttatttctattttcaagacttattc 502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338; HSP #2
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 7 - 163
Target Start/End: Complemental strand, 2823 - 2668
Alignment:
Q  7 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 106  Q
    |||| ||||||||||| ||||||||||||||||| | ||||||||| ||||||||||||||||||||| || |||||||||||||||||| ||| |||||    
T  2823 ctctaggttcttctctgctcttgttctccctttt-ctccaaaactgattgtacgtgaaaataattctagacttagtttctcctatttatcacttcccatc 2725  T
Q  107 tattttatcttatttccactttatccactaaattctctaaatcctcaaaacagcccc 163  Q
    ||||||||||||||| | ||   ||||| ||| ||||||||| | ||||||||||||    
T  2724 tattttatcttattttctctaattccacaaaactctctaaattcacaaaacagcccc 2668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 110 - 199
Target Start/End: Complemental strand, 10633 - 10545
Alignment:
Q  110 tttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaacttaattttatttctattttcaagacttattc 199  Q
    ||||||||||||||||||  ||||||||| ||||||||| ||||||||| |||| || || ||| |||||| |||||||||  |||||||    
T  10633 tttatcttatttccacttattccactaaactctctaaattctcaaaacaacccctcatctcaatattattt-tattttcaaatcttattc 10545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 149; Significance: 1e-78; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 7 - 199
Target Start/End: Complemental strand, 17460186 - 17459995
Alignment:
Q  7 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 106  Q
    |||||| |||||||||||||||||||| |||||| | ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| |||||    
T  17460186 ctcttgattcttctctcctcttgttcttcctttt-ctccaaaactggttgtatgtgaagataattctaaacctagtttctcctatttatctcttcccatc 17460088  T
Q  107 tattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaacttaattttatttctattttcaagacttattc 199  Q
    |||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  17460087 tattttatattatttccacttaatccactaaattctctaaatcctcaaaacagccccacaacttaatcttatttctattttcaagacttattc 17459995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 7 - 198
Target Start/End: Original strand, 23479161 - 23479356
Alignment:
Q  7 ctcttggttcttctctcctcttgtt--ctccctttttccccaaaactggttgtacgtgaaaa-taattctaaacctagtttctcctatttatctctttcc 103  Q
    ||||||||||| |||| ||||||||  |||||||||  |||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||| ||    
T  23479161 ctcttggttctcctcttctcttgttttctcccttttctcccaaaactggttgtacgtgaaaagtaattctaaacctagtttttcctatttatctcttccc 23479260  T
Q  104 atctattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaa-cttaattttatttctattttcaagacttatt 198  Q
    |||||||||||||||||||||||| |||||||||| ||||||||| |||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  23479261 atctattttatcttatttccacttaatccactaaactctctaaattctcaaaacagccccacaatcttaatcttatttctattttcaagacttatt 23479356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 7 - 198
Target Start/End: Original strand, 19880901 - 19881095
Alignment:
Q  7 ctcttggttcttctctcctcttgttctc-cctttttccccaaaactggttgtacgtgaaaa-taattctaaacctagtttctcctatttatctctttcca 104  Q
    ||||||||||| |||| |||||||| || || ||||| |||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||  ||    
T  19880901 ctcttggttctcctcttctcttgttttctcccttttctccaaaattggttgtacgtgaaaaataattctaaacctagtttctcctatttatctcttctca 19881000  T
Q  105 tctattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaa-cttaattttatttctattttcaagacttatt 198  Q
    ||||||||||||||||||||||| |||||||||| ||||||||| |||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  19881001 tctattttatcttatttccacttaatccactaaactctctaaattctcaaaacagccccacaatcttaatcttatttctattttcaagacttatt 19881095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 35 - 199
Target Start/End: Complemental strand, 19807337 - 19807173
Alignment:
Q  35 cctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatctattttatcttatttccactttatccac 134  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||  |||  ||||||||||||||||||||||||| |||| |    
T  19807337 cctttttctccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttataacttctcatctattttatcttatttccacttaatcccc 19807238  T
Q  135 taaattctctaaatcctcaaaacagccccacaacttaattttatttctattttcaagacttattc 199  Q
    |||||||||||||| || ||||||||||||| ||||||| |||||||||||||||||||||||||    
T  19807237 taaattctctaaattctgaaaacagccccactacttaatcttatttctattttcaagacttattc 19807173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 7 - 198
Target Start/End: Original strand, 26454787 - 26454981
Alignment:
Q  7 ctcttggttcttctctcctcttgttctc-cctttttccccaaaactggttgtacgtgaaaa-taattctaaacctagtttctcctatttatctctttcca 104  Q
    ||||||||||| |||| |||||||| || || ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||    
T  26454787 ctcttggttctcctcttctcttgttttctcccttttctccaaaactggttgtacgtgaaaaataattctaaacctagtttctcctatttatctcttccca 26454886  T
Q  105 tctattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaa-cttaattttatttctattttcaagacttatt 198  Q
    ||||||||||||||||| ||||| |||||||||| ||||||||| ||||||||||||||| || |||||| |||||||||||||||||| |||||    
T  26454887 tctattttatcttattttcacttaatccactaaactctctaaattctcaaaacagccccagaatcttaatcttatttctattttcaagatttatt 26454981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 9 - 198
Target Start/End: Complemental strand, 17158934 - 17158742
Alignment:
Q  9 cttggttcttctctcctcttgttctc-cctttttccccaaaactggttgtacgtgaaaa-taattctaaacctagtttctcctatttatctctttccatc 106  Q
    ||||||||| || | |||||||| || || ||||| ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| |||||    
T  17158934 cttggttctcctattctcttgttttctcccttttctccaaaactggttgtatgtgaaaaataattctaaacctagtttctcctatttatctcttcccatc 17158835  T
Q  107 tattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaa-cttaattttatttctattttcaagacttatt 198  Q
    ||||||||||||||||||||| |||||||||| ||||||||| ||||||| |||||||||| |||||| ||||||||||||||||||||||||    
T  17158834 tattttatcttatttccacttaatccactaaactctctaaattctcaaaaaagccccacaatcttaatcttatttctattttcaagacttatt 17158742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 7 - 199
Target Start/End: Original strand, 43113098 - 43113288
Alignment:
Q  7 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 106  Q
    |||||||||||  |||||||||||||||| |||| | ||||||||||||||| || |||| |||| ||| |||| |||||||||||||| | || |||||    
T  43113098 ctcttggttctcttctcctcttgttctccatttt-ctccaaaactggttgtaagtaaaaacaattataa-cctattttctcctatttatattttcccatc 43113195  T
Q  107 tattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaacttaattttatttctattttcaagacttattc 199  Q
    ||||||||||||||||||||| ||| |||||||| ||||||| |||||||||||||||||||||||| | |||||||||||||||||||||||    
T  43113196 tattttatcttatttccacttaatctactaaattttctaaattctcaaaacagccccacaacttaatctcatttctattttcaagacttattc 43113288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 7 - 199
Target Start/End: Original strand, 22184113 - 22184305
Alignment:
Q  7 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 106  Q
    |||||||||||||||||||||||||||||||||| | ||||||||| |||||||||||||||||||||||| || |||||||||||||| |||| |||||    
T  22184113 ctcttggttcttctctcctcttgttctccctttt-ctccaaaactgattgtacgtgaaaataattctaaacttattttctcctatttatatcttcccatc 22184211  T
Q  107 tattttatcttatttccactttatcc-actaaattctctaaatcctcaaaacagccccacaacttaat-tttatttctattttcaagacttattc 199  Q
    ||||||||||||||||| |||| ||| || ||| ||||||||| ||||||||| |||| || || ||| ||||||| |||||||||  |||||||    
T  22184212 tattttatcttatttcctctttttccaacaaaactctctaaattctcaaaacaacccctcatctcaatatttattt-tattttcaaatcttattc 22184305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 7 - 158
Target Start/End: Complemental strand, 17085048 - 17084898
Alignment:
Q  7 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 106  Q
    |||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||   ||||||||||| ||| ||||||||||||||| |||||    
T  17085048 ctcttggttcttctctcctcttgttctccctttt-ctccaaaactggttgtacgtgaaaacttttctaaacctattttttcctatttatctcttcccatc 17084950  T
Q  107 tattttatcttatttccactttatccactaaattctctaaatcctcaaaaca 158  Q
    ||||||||||||||||| ||||  |||| ||| ||||||||| |||||||||    
T  17084949 tattttatcttatttcctcttttcccacaaaactctctaaattctcaaaaca 17084898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 7 - 199
Target Start/End: Complemental strand, 22245215 - 22245025
Alignment:
Q  7 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 106  Q
    ||||||||||||||||||||||||||||| |||||| ||||||||| |||||||||||||   ||||||||||| ||||||||||||||||||| |||||    
T  22245215 ctcttggttcttctctcctcttgttctcc-tttttctccaaaactgattgtacgtgaaaact-ttctaaacctattttctcctatttatctcttcccatc 22245118  T
Q  107 tattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaacttaat-tttatttctattttcaagacttattc 199  Q
    ||||||||||||||||| ||||  |||| ||| ||||||||| ||||||||| |||| || || ||| ||||||| |||||||||  |||||||    
T  22245117 tattttatcttatttcctcttttcccacaaaactctctaaattctcaaaacaacccctcatctcaatatttattt-tattttcaaatcttattc 22245025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 7 - 190
Target Start/End: Complemental strand, 14102330 - 14102149
Alignment:
Q  7 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 106  Q
    |||||||||||||||||||||||||||||||||| | |||||||||||| |||||||||| ||||||||||||||||||||||||||||| ||| ||| |    
T  14102330 ctcttggttcttctctcctcttgttctccctttt-ctccaaaactggttttacgtgaaaa-aattctaaacctagtttctcctatttatcacttcccacc 14102233  T
Q  107 tattttatcttatttccactttat-ccactaaattctctaaatcctcaaaac-agccccacaacttaattttatttctattttcaa 190  Q
    |||||||||||||||||  || || |||| ||| ||||||||| | |||||| | |||||||||||||| |||||| |||||||||    
T  14102232 tattttatcttatttcc-tttaatcccacaaaactctctaaattcacaaaacaacccccacaacttaatcttattt-tattttcaa 14102149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 7 - 199
Target Start/End: Complemental strand, 22252293 - 22252104
Alignment:
Q  7 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 106  Q
    ||||||||||||||||||||||||||||  || ||| ||||||||| ||||||||||||||  ||||||||||| |||||||||||||||| || |||||    
T  22252293 ctcttggttcttctctcctcttgttctct-ttcttctccaaaactgattgtacgtgaaaat--ttctaaacctattttctcctatttatctattcccatc 22252197  T
Q  107 tattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaacttaat-tttatttctattttcaagacttattc 199  Q
    ||||||||||||||||| ||||  |||| ||| ||||||||| ||||||||| |||| || || ||| ||||||| |||||||||  |||||||    
T  22252196 tattttatcttatttcctcttttcccacaaaactctctaaattctcaaaacaacccctcatctcaatatttattt-tattttcaaatcttattc 22252104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 7 - 163
Target Start/End: Complemental strand, 19928734 - 19928582
Alignment:
Q  7 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 106  Q
    |||| |||||||||||||||||| ||||||||||   |||||||| |||  |||||||||   |||||| |||||||||||||||||||||||| |||||    
T  19928734 ctctcggttcttctctcctcttgctctccctttt---ccaaaacttgtttcacgtgaaaaactttctaa-cctagtttctcctatttatctcttcccatc 19928639  T
Q  107 tattttatcttatttccactttatccactaaattctctaaatcctcaaaacagcccc 163  Q
    ||||||||||||||||| |||  ||||||||| ||||||||| ||||||||||||||    
T  19928638 tattttatcttatttcctcttattccactaaactctctaaattctcaaaacagcccc 19928582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 7 - 199
Target Start/End: Complemental strand, 20501208 - 20501017
Alignment:
Q  7 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 106  Q
    ||||||||||||||||||||||||||||| |||||| ||||||||| || ||||||||||   ||||||| ||| ||||||||||||||||||| |||||    
T  20501208 ctcttggttcttctctcctcttgttctcc-tttttctccaaaactgattttacgtgaaaact-ttctaaatctattttctcctatttatctcttcccatc 20501111  T
Q  107 tattttatcttatttccactttat-ccactaaattctctaaatcctcaaaacagccccacaacttaat-tttatttctattttcaagacttattc 199  Q
    ||||||||||||||||| |||| | || | ||| ||||||||| ||||||||| |||| || || ||| ||||||| |||||||||  |||||||    
T  20501110 tattttatcttatttcctctttttcccccaaaactctctaaattctcaaaacaacccctcatctcaatatttattt-tattttcaaatcttattc 20501017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 24 - 199
Target Start/End: Original strand, 22432815 - 22432991
Alignment:
Q  24 ctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaaccta-gtttctcctatttatctctttccatctattttatcttatttc 122  Q
    |||||||||||||||| ||  ||||||||||||||||||||||||||||| ||||||  ||||||||||||||||||| |||||||| ||||||||||||    
T  22432815 ctcttgttctccctttctcttcaaaactggttgtacgtgaaaataattct-aacctatttttctcctatttatctcttcccatctatcttatcttatttc 22432913  T
Q  123 cactttat-ccactaaattctctaaatcctcaaaacagccccacaacttaat-tttatttctattttcaagacttattc 199  Q
    | |||| | |||| ||| ||||||||| ||||||||| |||| || || ||| ||||||| |||||||||  |||||||    
T  22432914 ctctttttcccacaaaactctctaaattctcaaaacaacccctcatctcaatatttattt-tattttcaaatcttattc 22432991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 7 - 122
Target Start/End: Original strand, 16198915 - 16199032
Alignment:
Q  7 ctcttggttcttctctcctcttgttctc-cctttttccccaaaactggttgtacgtgaaaa-taattctaaacctagtttctcctatttatctctttcca 104  Q
    ||||||||||| |||| |||||||| || || ||||| |||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| ||     
T  16198915 ctcttggttctcctcttctcttgttttctcccttttctccaaaactagttgtacgtgaaaaataattctaaacctagtttctcctatttatctcttccct 16199014  T
Q  105 tctattttatcttatttc 122  Q
    ||||||||||||||||||    
T  16199015 tctattttatcttatttc 16199032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 7 - 199
Target Start/End: Original strand, 22526483 - 22526678
Alignment:
Q  7 ctcttggttcttctctcctcttg----ttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttc 102  Q
    |||||||||||  ||||||||||    ||||||||||| | |||||||||   |||||||||||||||||||| |||| ||||||||||||||||||| |    
T  22526483 ctcttggttctcttctcctcttgatttttctccctttt-ctccaaaactgaacgtacgtgaaaataattctaa-cctattttctcctatttatctcttcc 22526580  T
Q  103 catctattttatcttatttccactttat-ccactaaattctctaaatcctcaaaacagccccacaacttaat-tttatttctattttcaagacttattc 199  Q
    ||||||||| ||||||||||| |||| | |||| ||| ||||||||| ||||||||| |||  ||||| ||| ||||||| |||||||||  |||||||    
T  22526581 catctatttcatcttatttcctctttttcccacaaaactctctaaattctcaaaacaacccatcaactcaatatttattt-tattttcaaatcttattc 22526678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 7 - 163
Target Start/End: Original strand, 28398561 - 28398715
Alignment:
Q  7 ctcttggttcttctctcctcttg----ttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttc 102  Q
    ||||||||||||| || ||||||    ||||||||||||| ||||||||| | ||||| |||||||||||||| | ||     |||||||||||||||||    
T  28398561 ctcttggttcttcccttctcttgacttttctccctttttctccaaaactgatcgtacgggaaaataattctaa-cata-----tcctatttatctctttc 28398654  T
Q  103 catctattttatcttatttccactttatccactaaattctctaaatcctcaaaacagcccc 163  Q
    ||||||||||||||||||||| ||||  |||| ||| ||||||||| ||||||||| ||||    
T  28398655 catctattttatcttatttcctcttttcccacaaaactctctaaattctcaaaacaacccc 28398715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 57 - 163
Target Start/End: Original strand, 22342033 - 22342139
Alignment:
Q  57 tacgtgaaaataattctaaacctagtttctcctatttatctctttccatctattttatcttatttccactttatccactaaattctctaaatcctcaaaa 156  Q
    ||||||||||||||||||||||||||||||||||||||||  || |||||||||||||||||||||| ||   ||||| ||| ||||||||| | |||||    
T  22342033 tacgtgaaaataattctaaacctagtttctcctatttatcatttcccatctattttatcttatttcctctaattccacaaaactctctaaattcacaaaa 22342132  T
Q  157 cagcccc 163  Q
    || ||||    
T  22342133 caacccc 22342139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 15 - 128
Target Start/End: Complemental strand, 40491999 - 40491886
Alignment:
Q  15 tcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctag-tttctcctatttatctctttccatctatttta 113  Q
    ||||||||||||||||||||||||||  ||||||| || |||||||||||||  ||||| | | ||| ||||||||||||||||||| ||||||||||||    
T  40491999 tcttctctcctcttgttctcccttttctcccaaaagtgattgtacgtgaaaactattctga-cttaggtttctcctatttatctcttcccatctatttta 40491901  T
Q  114 tcttatttccacttt 128  Q
    |||||||||| ||||    
T  40491900 tcttatttcctcttt 40491886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 57 - 199
Target Start/End: Original strand, 22996840 - 22996982
Alignment:
Q  57 tacgtgaaaataattctaaacctagtttctcctatttatctctttccatctattttatcttatttccactttat-ccactaaattctctaaatcctcaaa 155  Q
    |||||||||||||||||||||||| |||||| ||||||| |||||||||||||||||||||||||||  ||| | |||| ||| ||||||||| ||||||    
T  22996840 tacgtgaaaataattctaaacctattttctc-tatttatatctttccatctattttatcttatttcctttttttcccacaaaactctctaaattctcaaa 22996938  T
Q  156 acagccccacaacttaat-tttatttctattttcaagacttattc 199  Q
    ||| |||| || || ||| ||||||| |||||||||  |||||||    
T  22996939 acaacccctcatctcaatatttattt-tattttcaaatcttattc 22996982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 56 - 199
Target Start/End: Original strand, 22984690 - 22984833
Alignment:
Q  56 gtacgtgaaaataattctaaacctagtttctcctatttatctctttccatctattttatcttatttccactttat-ccactaaattctctaaatcctcaa 154  Q
    ||||||||||||||||||||||||| ||||| |||||||| |||| ||||||||||||| |||||||| |||| | |||| ||| ||||||||| |||||    
T  22984690 gtacgtgaaaataattctaaacctattttct-ctatttatttcttcccatctattttatattatttcctctttttcccacaaaaatctctaaattctcaa 22984788  T
Q  155 aacagccccacaacttaat-tttatttctattttcaagacttattc 199  Q
    |||| |||| || || ||| ||||||| |||||||||  |||||||    
T  22984789 aacaacccctcatctcaatatttattt-tattttcaaatcttattc 22984833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 8 - 163
Target Start/End: Complemental strand, 19153990 - 19153833
Alignment:
Q  8 tcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtt-tctcctatttatctct-ttccat 105  Q
    |||||||||||||||| ||||||||||||||||  ||||||| || |||||||||||||   |||||||||||||| || ||||||||| |||  || ||    
T  19153990 tcttggttcttctctcttcttgttctcccttttctcccaaaagtgattgtacgtgaaaacttttctaaacctagttctcacctatttatatctcctctat 19153891  T
Q  106 ctattttatcttatttccactttatccactaaattctctaaatcctcaaaacagcccc 163  Q
    ||||| ||||||||| |   ||| ||||| ||| ||| ||||| | ||||||||||||    
T  19153890 ctattctatcttattcctcttttttccacaaaactctttaaattcacaaaacagcccc 19153833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 82 - 199
Target Start/End: Original strand, 16800510 - 16800628
Alignment:
Q  82 tttctcctatttatctctttccatctattttatcttatttccactttat-ccactaaattctctaaatcctcaaaacagccccacaacttaat-tttatt 179  Q
    ||||||||||||||||||| |||||||||||||||||||||| |||| | |||| ||| ||||||||| ||||||||| |||| || || ||| ||||||    
T  16800510 tttctcctatttatctcttcccatctattttatcttatttcctctttttcccacaaaactctctaaattctcaaaacaacccctcatctcaatatttatt 16800609  T
Q  180 tctattttcaagacttattc 199  Q
    | |||||||||  |||||||    
T  16800610 t-tattttcaaatcttattc 16800628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 7 - 66
Target Start/End: Complemental strand, 17085282 - 17085224
Alignment:
Q  7 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaa 66  Q
    |||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||    
T  17085282 ctcttggttcttctctcctcttgttctccc-ttttctccaaaactggttgtacgtgaaaa 17085224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 81 - 199
Target Start/End: Complemental strand, 2417918 - 2417799
Alignment:
Q  81 gtttctcctatttatctctttccatctattttatcttatttccactttat-ccactaaattctctaaatcctcaaaacagccccacaacttaat-tttat 178  Q
    |||||||||||||||||||| |||||||||||||||||||||| |||| | || | ||| ||||||||| ||||||||| |||| || || ||| |||||    
T  2417918 gtttctcctatttatctcttcccatctattttatcttatttcctctttttcccccaaaactctctaaattctcaaaacaacccctcatctcaatatttat 2417819  T
Q  179 ttctattttcaagacttattc 199  Q
    || |||||||||  |||||||    
T  2417818 tt-tattttcaaatcttattc 2417799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 199
Target Start/End: Complemental strand, 20532506 - 20532319
Alignment:
Q  15 tcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaata-attctaaacctag--tttctcctatttatctctttccatctattt 111  Q
    |||||||||||||||||| |||||||  |||||||||| |||||||| ||||   ||||| | | |||  |||||| |||||||||||| ||||||||||    
T  20532506 tcttctctcctcttgttcccccttttctcccaaaactgtttgtacgtaaaaaactattctga-cttagattttctcatatttatctcttcccatctattt 20532408  T
Q  112 tatcttatttccactttat-ccactaaattctctaaatcctcaaaacagccccacaacttaat-tttatttctattttcaagacttattc 199  Q
    |||||||| ||| |||| | |||| ||| ||| ||||  ||||||||| |||| ||||| ||| ||||||| |||||||||  |||||||    
T  20532407 tatcttatgtcctctttttcccacaaaactctataaaatctcaaaacaacccctcaactcaatatttattt-tattttcaaatcttattc 20532319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 15 - 199
Target Start/End: Complemental strand, 22423456 - 22423268
Alignment:
Q  15 tcttctctcctcttgttctccctttttc-cccaaaactggttgtacgtgaaaataattctaaacctag--tttctcctatt--tatctctttccatctat 109  Q
    |||||||||||||||||||||||||||| ||||||| || |||||||||||||  ||| |  || |||  |||||||||||  |||||||| ||||||||    
T  22423456 tcttctctcctcttgttctccctttttctcccaaaagtgattgtacgtgaaaactattat-gacttaggttttctcctatttatatctcttcccatctat 22423358  T
Q  110 tttatcttatttccactttat-ccactaaattctctaaatcctcaaaacagccccacaacttaat-tttatttctattttcaagacttattc 199  Q
    ||||||||| |||| |||| | |||| ||| ||||||||  ||||||||| |||| || || ||| ||||||| |||||||||  |||||||    
T  22423357 tttatctta-ttcctctttttcccacaaaactctctaaaatctcaaaacaacccctcatctcaatgtttattt-tattttcaaatcttattc 22423268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 110 - 161
Target Start/End: Complemental strand, 17272502 - 17272451
Alignment:
Q  110 tttatcttatttccactttatccactaaattctctaaatcctcaaaacagcc 161  Q
    ||||||||||||||||||  ||||||||| ||||||||| ||||||||||||    
T  17272502 tttatcttatttccacttattccactaaactctctaaattctcaaaacagcc 17272451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 77 - 190
Target Start/End: Complemental strand, 45469120 - 45469009
Alignment:
Q  77 cctagtttctcctatttatctctttccatctattttatcttatttccactttatccactaaattc-tctaaatcctcaaaacagccccacaacttaattt 175  Q
    |||||||| |||||||||| || | | | ||| |||||||||||||||||| |||||||||| || ||||||| | ||||| |||||| ||||||||| |    
T  45469120 cctagtttttcctatttatttcct-caacctactttatcttatttccacttaatccactaaactcttctaaattc-caaaatagcccctcaacttaatat 45469023  T
Q  176 tatttctattttcaa 190  Q
    ||||| |||||||||    
T  45469022 tattt-tattttcaa 45469009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 110 - 199
Target Start/End: Complemental strand, 13660727 - 13660639
Alignment:
Q  110 tttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaacttaattttatttctattttcaagacttattc 199  Q
    |||||||||||||| |||  ||||||||| ||||||||| |||||||||||| | || || ||| |||||| |||||||||  |||||||    
T  13660727 tttatcttatttcctcttattccactaaactctctaaattctcaaaacagcctctcatctcaatattattt-tattttcaaatcttattc 13660639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 110 - 199
Target Start/End: Complemental strand, 13719370 - 13719282
Alignment:
Q  110 tttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaacttaattttatttctattttcaagacttattc 199  Q
    |||||||||||||| |||  ||||||||| ||||||||| |||||||||||| | || || ||| |||||| |||||||||  |||||||    
T  13719370 tttatcttatttcctcttattccactaaactctctaaattctcaaaacagcctctcatctcaatattattt-tattttcaaatcttattc 13719282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 7 - 60
Target Start/End: Original strand, 37516682 - 37516734
Alignment:
Q  7 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacg 60  Q
    ||||||||||||||||||||||||||| || ||||| |||||| ||||||||||    
T  37516682 ctcttggttcttctctcctcttgttcttcc-ttttctccaaaattggttgtacg 37516734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 199
Target Start/End: Original strand, 17218879 - 17218969
Alignment:
Q  110 tttatcttatttccactttatccactaaattc-tctaaatcctcaaaacag--ccccacaacttaattttatttctattttcaagacttattc 199  Q
    ||||||||||||||||||  ||||||||| || ||||||| | ||||||||  |||||||||||||| |||||| |||||||||  |||||||    
T  17218879 tttatcttatttccacttattccactaaactcttctaaattc-caaaacagccccccacaacttaatattattt-tattttcaaatcttattc 17218969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 30 - 120
Target Start/End: Complemental strand, 17438615 - 17438523
Alignment:
Q  30 ttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtt-tctcctatttatctct-ttccatctattttatcttatt 120  Q
    |||||||||||  || ||||||| |||||||||||||   |||||||||||||| || ||||||||| |||  || ||||||| |||||||||    
T  17438615 ttctcccttttctccaaaaactgattgtacgtgaaaacttttctaaacctagttctcacctatttatatctcctctatctattctatcttatt 17438523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 126; Significance: 7e-65; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 8 - 198
Target Start/End: Original strand, 17011808 - 17012001
Alignment:
Q  8 tcttggttcttctctcctcttgttctc-cctttttccccaaaactggttgtacgtgaaaa-taattctaaacctagtttctcctatttatctctttccat 105  Q
    |||||||||| |||| |||||||| || || ||||| ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| ||||    
T  17011808 tcttggttctcctcttctcttgttttctcccttttctccaaaactggttgtatgtgaaaaataattctaaacctagtttctcctatttatctcttcccat 17011907  T
Q  106 ctattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaa-cttaattttatttctattttcaagacttatt 198  Q
    |||||||||||||||||||||| |||||||||| ||||||||| |||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  17011908 ctattttatcttatttccacttaatccactaaactctctaaattctcaaaacagccccacaatcttaatcttatttctattttcaagacttatt 17012001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 7 - 198
Target Start/End: Original strand, 31457039 - 31457234
Alignment:
Q  7 ctcttggttcttctctcctcttgtt--ctccctttttccccaaaactggttgtacgtgaaaa-taattctaaacctagtttctcctatttatctctttcc 103  Q
    ||||||||||| || | ||||||||  ||||||||||| ||||||||| ||||||||||||| ||||| ||||||||||||||||||||||||| || ||    
T  31457039 ctcttggttctcctgttctcttgttttctccctttttctccaaaactgattgtacgtgaaaaataattataaacctagtttctcctatttatctattccc 31457138  T
Q  104 atctattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaa-cttaattttatttctattttcaagacttatt 198  Q
    |||||||||||||||||||||||| |||||||||| ||||||||| |||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  31457139 atctattttatcttatttccacttaatccactaaactctctaaattctcaaaacagccccacaatcttaatcttatttctattttcaagacttatt 31457234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 38 - 198
Target Start/End: Original strand, 17876305 - 17876467
Alignment:
Q  38 ttttccccaaaactggttgtacgtgaaaa-taattctaaacctagtttctcctatttatctctttccatctattttatcttatttccactttatccacta 136  Q
    ||||| |||||||||||||||| |||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||    
T  17876305 ttttctccaaaactggttgtacatgaaaaataattctaaacctagtttctcctatttatctcttcccatctattttatcttatttccacttaatccacta 17876404  T
Q  137 aattctctaaatcctcaaaacagccccacaa-cttaattttatttctattttcaagacttatt 198  Q
    || ||||||||| |||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  17876405 aactctctaaattctcaaaacagccccacaatcttaatcttatttctattttcaagacttatt 17876467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 7 - 163
Target Start/End: Original strand, 6766832 - 6766987
Alignment:
Q  7 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 106  Q
    |||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||    
T  6766832 ctcttggttcttctctcctcttgttctccctttt-ctccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatcacttcccatc 6766930  T
Q  107 tattttatcttatttccactttatccactaaattctctaaatcctcaaaacagcccc 163  Q
    |||||||||||||||||  |   ||||| ||| ||||||||| | ||||||||||||    
T  6766931 tattttatcttatttcctttaattccacaaaactctctaaattcacaaaacagcccc 6766987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 7 - 199
Target Start/End: Original strand, 23476479 - 23476670
Alignment:
Q  7 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 106  Q
    ||||||||||| ||| |||||||||||||||||| | ||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  23476479 ctcttggttctcctcgcctcttgttctccctttt-ctccaaaactgattgtacgtgaaaataattctaaacctattttctcctatttatctcttcccatc 23476577  T
Q  107 tattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaacttaat-tttatttctattttcaagacttattc 199  Q
    ||||||||||||||||| ||||  |||| ||| ||||||||| ||||||||| |||| || || ||| ||||||| |||||||||  |||||||    
T  23476578 tattttatcttatttcctcttttcccacaaaactctctaaattctcaaaacaacccctcatctcaatatttattt-tattttcaaatcttattc 23476670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 7 - 163
Target Start/End: Complemental strand, 25573555 - 25573400
Alignment:
Q  7 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 106  Q
    |||||||||||||||||||||||||||||||||| | ||||||||||||||| |||||||   ||||||||||| ||||||||||||||||||| |||||    
T  25573555 ctcttggttcttctctcctcttgttctccctttt-ctccaaaactggttgtatgtgaaaacttttctaaacctattttctcctatttatctcttcccatc 25573457  T
Q  107 tattttatcttatttccactttatccactaaattctctaaatcctcaaaacagcccc 163  Q
    |||| |||||||||||| ||||  |||| ||| ||||||||| ||||||||| ||||    
T  25573456 tattctatcttatttcctcttttcccacaaaactctctaaattctcaaaacaacccc 25573400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 7 - 163
Target Start/End: Original strand, 266112 - 266267
Alignment:
Q  7 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 106  Q
    |||||||||||||||||||||||||||||||||| | |||||||| ||||||| ||||||||| |||||||||| ||||||||||||||| ||| |||||    
T  266112 ctcttggttcttctctcctcttgttctccctttt-ctccaaaactagttgtacatgaaaataactctaaacctaatttctcctatttatcacttcccatc 266210  T
Q  107 tattttatcttatttccactttatccactaaattctctaaatcctcaaaacagcccc 163  Q
    |||||||||||||||||  |   ||||| ||| ||||||||| | ||||||||||||    
T  266211 tattttatcttatttcctttaattccacaaaactctctaaattcacaaaacagcccc 266267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 7 - 123
Target Start/End: Original strand, 29448919 - 29449036
Alignment:
Q  7 ctcttggttcttctctcctcttgttctc-cctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccat 105  Q
    ||||||||||| ||||  ||||||| || || ||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  29448919 ctcttggttctcctcttatcttgttttctcccttttctcaaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatcacttcccat 29449018  T
Q  106 ctattttatcttatttcc 123  Q
    ||||||||||||||||||    
T  29449019 ctattttatcttatttcc 29449036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 7 - 100
Target Start/End: Original strand, 23470767 - 23470859
Alignment:
Q  7 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctt 100  Q
    ||||| ||||| |||||||||||||||||||||| | ||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  23470767 ctcttagttctcctctcctcttgttctccctttt-ctccaaaactgattgtacgtgaaaataattctaaacctattttctcctatttatctctt 23470859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 113 - 198
Target Start/End: Complemental strand, 33898534 - 33898448
Alignment:
Q  113 atcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaa-cttaattttatttctattttcaagacttatt 198  Q
    ||||||||||||||| |||||||||| ||||||||| |||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  33898534 atcttatttccacttaatccactaaactctctaaattctcaaaacagccccacaatcttaatcttatttctattttcaagacttatt 33898448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 37 - 199
Target Start/End: Original strand, 40726790 - 40726953
Alignment:
Q  37 tttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctct-ttccatctattttatcttatttccactttatccact 135  Q
    |||||| ||||||||| | ||||||||||||||||||||||||||||||||||||||||||||  || ||| | |||||||||||||| || | ||||||    
T  40726790 tttttctccaaaactgatcgtacgtgaaaataattctaaacctagtttctcctatttatctctcctcaatccactttatcttatttcctctatgtccact 40726889  T
Q  136 aaattc-tctaaatcctcaaaacagccccacaacttaat-tttatttctattttcaagacttattc 199  Q
    ||| || ||||||| | | ||||||||||||| || ||| ||||||| |||||||||  |||||||    
T  40726890 aaactcttctaaattc-ctaaacagccccacatctcaatatttattt-tattttcaaatcttattc 40726953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 7 - 163
Target Start/End: Original strand, 15797414 - 15797571
Alignment:
Q  7 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtt-tctcctatttatctctttccat 105  Q
    ||||||||| |||||| |||||||||||||||||  || ||||||| |||||||||||||   |||||||||||||| || ||||||||| |||  ||||    
T  15797414 ctcttggttattctcttctcttgttctcccttttctccaaaaactgcttgtacgtgaaaacttttctaaacctagttctcacctatttatatctccccat 15797513  T
Q  106 ctattttatcttatttccac-tttatccactaaattctctaaatcctcaaaacagcccc 163  Q
    |||| |||||||| |||||| ||| ||||| ||| ||||||||| | ||||||| ||||    
T  15797514 ctatcttatctta-ttccacttttttccacaaaactctctaaattcacaaaacaacccc 15797571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 38 - 199
Target Start/End: Original strand, 20572870 - 20573031
Alignment:
Q  38 ttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatctattttatcttatttccactttat-ccacta 136  Q
    ||||| |||||||||   |||||||||||   |||||| |||| ||||||||||||||||||||||||||||||||||||||||||  ||| | |||| |    
T  20572870 ttttctccaaaactgaacgtacgtgaaaacttttctaa-cctattttctcctatttatctctttccatctattttatcttatttcctttttttcccacaa 20572968  T
Q  137 aattctctaaatcctcaaaacagccccacaacttaat-tttatttctattttcaagacttattc 199  Q
    || || |||||| ||||||||| |||| || || ||| ||||||| |||||||||| |||||||    
T  20572969 aactcactaaattctcaaaacaacccctcatctcaatatttattt-tattttcaagtcttattc 20573031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 110 - 199
Target Start/End: Original strand, 10818037 - 10818126
Alignment:
Q  110 tttatcttatttccactttatccactaaattctctaaatcctcaaaacag-ccccacaacttaattttatttctattttcaagacttattc 199  Q
    ||||||||||||||||||  ||||||||| ||||||||| |||||||||| |||||||||||||| |||||| |||||||||  |||||||    
T  10818037 tttatcttatttccacttattccactaaactctctaaattctcaaaacagcccccacaacttaatcttattt-tattttcaaatcttattc 10818126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 110 - 199
Target Start/End: Complemental strand, 22776897 - 22776808
Alignment:
Q  110 tttatcttatttccactttatccactaaattctctaaatcctcaaaacag-ccccacaacttaattttatttctattttcaagacttattc 199  Q
    ||||||||||||||||||  ||||||||| ||||||||| |||||||||| |||||||||||||| |||||| |||||||||  |||||||    
T  22776897 tttatcttatttccacttattccactaaactctctaaattctcaaaacagcccccacaacttaatcttattt-tattttcaaatcttattc 22776808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 56 - 163
Target Start/End: Complemental strand, 21344378 - 21344270
Alignment:
Q  56 gtacgtgaaaataattctaaacctagtttctcctatttatctctttccatctattttatcttatttccactttat-ccactaaattctctaaatcctcaa 154  Q
    |||||||||||   ||||||||||| | |||||||| ||||||||||||||||||||||||||||| | |||| | |||| ||| ||||||||  |||||    
T  21344378 gtacgtgaaaacttttctaaacctattctctcctatatatctctttccatctattttatcttatttgctctttttcccacaaaactctctaaaatctcaa 21344279  T
Q  155 aacagcccc 163  Q
    |||| ||||    
T  21344278 aacaacccc 21344270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 199
Target Start/End: Complemental strand, 19616424 - 19616237
Alignment:
Q  10 ttggttcttctctcctcttgttctc-cctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatcta 108  Q
    ||||||||||||| |||||||| |  || ||||| |||||||| ||| ||||||||||  ||| | | |||| |||||||||||||| || | | | |      
T  19616424 ttggttcttctcttctcttgttttatcccttttctccaaaacttgttttacgtgaaaactattatga-cctattttctcctatttatttcct-caaccct 19616327  T
Q  109 ttttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaacttaattttatttctattttcaagacttattc 199  Q
     ||||||||||||||||||  ||||||||| ||||||||| |||||||||||||| || || ||| |||||| |||||||||  |||||||    
T  19616326 ctttatcttatttccacttattccactaaactctctaaattctcaaaacagcccctcatctcaatattattt-tattttcaaatcttattc 19616237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 70 - 163
Target Start/End: Complemental strand, 21327334 - 21327240
Alignment:
Q  70 ttctaaacctagtttctcctatttatctctttccatctattttatcttatttccact-ttatccactaaattctctaaatcctcaaaacagcccc 163  Q
    ||||||||||| | |||||||| ||||||||||||||||||||||||||||||| || ||  |||| ||| ||||||||  ||||||||| ||||    
T  21327334 ttctaaacctattctctcctatatatctctttccatctattttatcttatttcctctctttcccacaaaactctctaaaatctcaaaacaacccc 21327240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 110 - 199
Target Start/End: Complemental strand, 21405500 - 21405412
Alignment:
Q  110 tttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaacttaattttatttctattttcaagacttattc 199  Q
    ||||||||||||||||||  ||||||||| ||||||||| |||||||||||||| || || ||| |||||| |||||||||  |||||||    
T  21405500 tttatcttatttccacttattccactaaactctctaaattctcaaaacagcccctcatctcaatattattt-tattttcaaatcttattc 21405412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 110 - 199
Target Start/End: Complemental strand, 41860468 - 41860380
Alignment:
Q  110 tttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaacttaattttatttctattttcaagacttattc 199  Q
    ||||||||||||||||||  ||||||||| ||||||||| |||||||||||||| || || ||| |||||| |||||||||  |||||||    
T  41860468 tttatcttatttccacttattccactaaactctctaaattctcaaaacagcccctcatctcaatattattt-tattttcaaatcttattc 41860380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 10 - 199
Target Start/End: Complemental strand, 25249800 - 25249609
Alignment:
Q  10 ttggttcttctctcctcttg--ttctccctttttccccaaaa-ctggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 106  Q
    ||||||||||||| ||||||  ||||||||||||| |||||| || ||| |||||| |||  ||||| |  ||| |||||||||||||| || | | | |    
T  25249800 ttggttcttctcttctcttggtttctccctttttctccaaaaacttgttttacgtgtaaactattcttactctactttctcctatttatttcct-caacc 25249702  T
Q  107 tattttatcttatttccactttatccactaaattc-tctaaatcctcaaaacagcccc-acaacttaattttatttctattttcaagacttattc 199  Q
       ||||||||||||||||||  ||||||||| || ||||||| | |||||||||||| |||||||||| |||||| |||||||||  |||||||    
T  25249701 ctctttatcttatttccacttattccactaaactcttctaaattc-caaaacagcccctacaacttaatattattt-tattttcaaatcttattc 25249609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 10 - 199
Target Start/End: Complemental strand, 25313584 - 25313393
Alignment:
Q  10 ttggttcttctctcctcttg--ttctccctttttccccaaaa-ctggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 106  Q
    ||||||||||||| ||||||  ||||||||||||| |||||| || ||| |||||| |||  ||||| |  ||| |||||||||||||| || | | | |    
T  25313584 ttggttcttctcttctcttggtttctccctttttctccaaaaacttgttttacgtgtaaactattcttactctactttctcctatttatttcct-caacc 25313486  T
Q  107 tattttatcttatttccactttatccactaaattc-tctaaatcctcaaaacagcccc-acaacttaattttatttctattttcaagacttattc 199  Q
       ||||||||||||||||||  ||||||||| || ||||||| | |||||||||||| |||||||||| |||||| |||||||||  |||||||    
T  25313485 ctctttatcttatttccacttattccactaaactcttctaaattc-caaaacagcccctacaacttaatattattt-tattttcaaatcttattc 25313393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 82 - 199
Target Start/End: Complemental strand, 26739696 - 26739578
Alignment:
Q  82 tttctcctatttatctctttccatctattttatcttatttccactttat-ccactaaattctctaaatcctcaaaacagccccacaacttaat-tttatt 179  Q
    |||||| ||| |||||||| |||||||||||||||||||||| |||| | |||| ||| ||||||||  ||||||||| |||| || || ||| ||||||    
T  26739696 tttctcttatatatctcttcccatctattttatcttatttcctctttttcccacaaaactctctaaaatctcaaaacaacccctcatctcaatatttatt 26739597  T
Q  180 tctattttcaagacttattc 199  Q
    | |||||||||  |||||||    
T  26739596 t-tattttcaaatcttattc 26739578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 83 - 163
Target Start/End: Complemental strand, 21870698 - 21870617
Alignment:
Q  83 ttctcctatttatctct--ttccatctattttatcttatttccactttatccactaaattctctaaatcctcaaaacagcccc 163  Q
    ||||||||||||| |||  | ||||||||||||||||||| ||||||   |||||||| ||||||||| | ||||||||||||    
T  21870698 ttctcctatttatatctcctcccatctattttatcttatt-ccacttataccactaaactctctaaattcacaaaacagcccc 21870617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 83 - 163
Target Start/End: Complemental strand, 21874978 - 21874897
Alignment:
Q  83 ttctcctatttatctct--ttccatctattttatcttatttccactttatccactaaattctctaaatcctcaaaacagcccc 163  Q
    ||||||||||||| |||  | ||||||||||||||||||| ||||||   |||||||| ||||||||| | ||||||||||||    
T  21874978 ttctcctatttatatctcctcccatctattttatcttatt-ccacttataccactaaactctctaaattcacaaaacagcccc 21874897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 199
Target Start/End: Complemental strand, 20469087 - 20468969
Alignment:
Q  79 tagtttctcctatttatctctttccatctattttatcttatttccactttatccactaaattc-tctaaatcctcaaaacagccccacaacttaatttta 177  Q
    ||||||||||||||||| || | | | |||||||||||||||| |||||  ||||||||| || ||||||| |  ||||||||||| ||||| ||| |||    
T  20469087 tagtttctcctatttatttcct-caacctattttatcttattttcacttattccactaaactcttctaaattc-gaaaacagcccctcaactcaatatta 20468990  T
Q  178 tttctattttcaagacttattc 199  Q
    ||| |||||||||  |||||||    
T  20468989 ttt-tattttcaaatcttattc 20468969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 123; Significance: 4e-63; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 7 - 198
Target Start/End: Original strand, 21176 - 21370
Alignment:
Q  7 ctcttggttcttctctcctcttgttctc-cctttttccccaaaactggttgtacgtgaaaa-taattctaaacctagtttctcctatttatctctttcca 104  Q
    ||||||||||| |||| |||||||| || || ||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||  |     
T  21176 ctcttggttctcctcttctcttgttttctcccttttctccaaaactggttgtacgtgaaaaataattctaaacctagtttctcctatttatctcttctct 21275  T
Q  105 tctattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaa-cttaattttatttctattttcaagacttatt 198  Q
    ||||||||||||||||||||||| |||||||||| ||||||||| |||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  21276 tctattttatcttatttccacttaatccactaaactctctaaattctcaaaacagccccacaatcttaatcttatttctattttcaagacttatt 21370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 123; Significance: 4e-63; HSPs: 25)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 7 - 198
Target Start/End: Original strand, 40620611 - 40620805
Alignment:
Q  7 ctcttggttcttctctcctcttgttctc-cctttttccccaaaactggttgtacgtgaaaa-taattctaaacctagtttctcctatttatctctttcca 104  Q
    ||||| ||||| |||| |||||||| || || ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||    
T  40620611 ctcttagttctcctcttctcttgttttctcccttttctccaaaactggttgtacgtgaaaaataattctaaacctagtttctcctatttatctcttccca 40620710  T
Q  105 tctattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaa-cttaattttatttctattttcaagacttatt 198  Q
    ||||||||||||||||||||||| |||||||||| ||||||||| ||||||||| |||||||| |||||| ||||||||||||||||||||||||    
T  40620711 tctattttatcttatttccacttaatccactaaactctctaaattctcaaaacaaccccacaatcttaatcttatttctattttcaagacttatt 40620805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 7 - 198
Target Start/End: Original strand, 15009042 - 15009236
Alignment:
Q  7 ctcttggttcttctctcctcttgttctc-cctttttccccaaaactggttgtacgtgaaaa-taattctaaacctagtttctcctatttatctctttcca 104  Q
    ||||||||||| |||| |||||||| || || ||||| ||||||||||||| ||||||||| |||||||||| ||||||||||||||||||||||| ||     
T  15009042 ctcttggttctcctcttctcttgttttctcccttttctccaaaactggttgaacgtgaaaaataattctaaaactagtttctcctatttatctcttccct 15009141  T
Q  105 tctattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaa-cttaattttatttctattttcaagacttatt 198  Q
    ||||||||||||||||||||||| |||||||||| ||||||||| |||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  15009142 tctattttatcttatttccacttaatccactaaactctctaaattctcaaaacagccccacaatcttaatcttatttctattttcaagacttatt 15009236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 7 - 163
Target Start/End: Original strand, 12841638 - 12841793
Alignment:
Q  7 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 106  Q
    |||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||    
T  12841638 ctcttggttcttctctcctcttgttctccctttt-ctccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatcacttcccatc 12841736  T
Q  107 tattttatcttatttccactttatccactaaattctctaaatcctcaaaacagcccc 163  Q
    ||||||||||||||||| ||   ||||| ||| ||||||||| | ||||||||||||    
T  12841737 tattttatcttatttcctctaattccacaaaactctctaaattcacaaaacagcccc 12841793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 7 - 158
Target Start/End: Complemental strand, 32306130 - 32305980
Alignment:
Q  7 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 106  Q
    ||||||||||||| |||||||||||||||||||| | |||||||| ||||||||||||||||||||||||| || |||||||||||| |||||| |||||    
T  32306130 ctcttggttcttccctcctcttgttctccctttt-ctccaaaactagttgtacgtgaaaataattctaaacttattttctcctatttttctcttcccatc 32306032  T
Q  107 tattttatcttatttccactttatccactaaattctctaaatcctcaaaaca 158  Q
    ||||||||||||||||| ||||  |||| ||| ||||||||| |||||||||    
T  32306031 tattttatcttatttcctcttttcccacaaaactctctaaattctcaaaaca 32305980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 7 - 158
Target Start/End: Complemental strand, 14852002 - 14851852
Alignment:
Q  7 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 106  Q
    |||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||   ||||||| ||| ||| ||||||||||||||| |||||    
T  14852002 ctcttggttcttctctcctcttgttctccctttt-ctccaaaactggttgtacgtgaaaacttttctaaatctattttatcctatttatctcttcccatc 14851904  T
Q  107 tattttatcttatttccactttatccactaaattctctaaatcctcaaaaca 158  Q
    ||||||||||||||||| ||||  |||| ||| ||||||||| |||||||||    
T  14851903 tattttatcttatttcctcttttcccacaaaactctctaaattctcaaaaca 14851852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 22 - 199
Target Start/End: Complemental strand, 26049582 - 26049406
Alignment:
Q  22 tcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatctattttatcttattt 121  Q
    ||||||||||||||||||| | |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||  |||||||||||||||||||    
T  26049582 tcctcttgttctccctttt-ctccaaaactggttgtacgtgaaaataattataaacctattttctcctatttatctcttctcatctattttatcttattt 26049484  T
Q  122 ccactttatccactaaattctctaaatcctcaaaacagccccacaactt-aattttatttctattttcaagacttattc 199  Q
    || ||||   ||| ||| ||||||||| ||||||||| |||| || ||| || ||||||| |||||||||| |||||||    
T  26049483 cctcttttctcacaaaactctctaaattctcaaaacaacccctcatcttaaaatttattt-tattttcaagtcttattc 26049406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 7 - 199
Target Start/End: Original strand, 15792767 - 15792959
Alignment:
Q  7 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 106  Q
    ||||||||||||||||| |||||||||||||||| | |||||||||||||||||||||||   ||||||| ||| ||||||| ||||||||||| |||||    
T  15792767 ctcttggttcttctctcttcttgttctccctttt-ctccaaaactggttgtacgtgaaaacttttctaaatctattttctccgatttatctcttcccatc 15792865  T
Q  107 tattttatcttatttccactttat-ccactaaattctctaaatcctcaaaacagccccacaacttaat-tttatttctattttcaagacttattc 199  Q
    ||||||||||||||||| |||| | |||| ||| ||||||||| ||||||||| |||| || || ||| ||||||| |||||||||  |||||||    
T  15792866 tattttatcttatttcctctttttcccacaaaactctctaaattctcaaaacaacccctcatctcaatatttattt-tattttcaaatcttattc 15792959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 7 - 163
Target Start/End: Original strand, 14651700 - 14651852
Alignment:
Q  7 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 106  Q
    ||||||||||||||||||||||||||||||||||   |||||||| |||  |||| |||| |||||||| |||| ||||||||||||||||||| |||||    
T  14651700 ctcttggttcttctctcctcttgttctccctttt---ccaaaacttgtttcacgtaaaaacaattctaa-cctattttctcctatttatctcttcccatc 14651795  T
Q  107 tattttatcttatttccactttatccactaaattctctaaatcctcaaaacagcccc 163  Q
    ||||||||||||||| | | |  ||||||||| ||||||||| ||||||||| ||||    
T  14651796 tattttatcttatttactcctcttccactaaactctctaaattctcaaaacaacccc 14651852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 7 - 158
Target Start/End: Original strand, 26790328 - 26790482
Alignment:
Q  7 ctcttggttcttctctcctcttg----ttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagttt-ctcctatttatctcttt 101  Q
    ||||||||||||| || ||||||    ||||||||||| | |||||||||||||||||||||||||||| ||| |||| ||| |||||||||||||||||    
T  26790328 ctcttggttcttcccttctcttgacttttctccctttt-ctccaaaactggttgtacgtgaaaataattataa-cctatttttctcctatttatctcttt 26790425  T
Q  102 ccatctattttatcttatttccactttatccactaaattctctaaatcctcaaaaca 158  Q
    |||||||||||||||||||||| ||||  |||| ||| ||||||||| |||||||||    
T  26790426 ccatctattttatcttatttcctcttttcccacaaaactctctaaattctcaaaaca 26790482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 82 - 199
Target Start/End: Original strand, 13847356 - 13847464
Alignment:
Q  82 tttctcctatttatctctttccatctattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaacttaattttatttc 181  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||         |||||||||||||||||||||| |||||||||||||| |||||||    
T  13847356 tttctcctatttatctcttcccatctattttatcttatttccactt---------aattctctaaatcctcaaaacaaccccacaacttaatcttatttc 13847446  T
Q  182 tattttcaagacttattc 199  Q
    ||||||||| ||||||||    
T  13847447 tattttcaaaacttattc 13847464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 15 - 199
Target Start/End: Original strand, 14826092 - 14826278
Alignment:
Q  15 tcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctag--tttctcctatttatctctttccatctatttt 112  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||| ||||  ||||| | | |||  ||||||||||||||||||| |||||||||||    
T  14826092 tcttctctcctcttgttctcccttttctcccaaaactggttgtacgtaaaaactattctga-cttaggttttctcctatttatctcttaccatctatttt 14826190  T
Q  113 atcttatttccactttat-ccactaaattctctaaatcctcaaaacagccccacaacttaat-tttatttctattttcaagacttattc 199  Q
    ||||||||||| |||| | |||| ||| ||||||||| ||| ||||| |||| || || ||| ||||||| |||||||||  |||||||    
T  14826191 atcttatttcctctttttcccacaaaactctctaaattctccaaacaacccctcatctcaatatttattt-tattttcaaatcttattc 14826278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 7 - 158
Target Start/End: Original strand, 21103939 - 21104086
Alignment:
Q  7 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 106  Q
    ||||| ||||||||||||||||||||||||||||   |||||||| |||  |||| |||| |||||||| |||| |||||| |||||||||||| |||||    
T  21103939 ctcttagttcttctctcctcttgttctccctttt---ccaaaacttgtttcacgtaaaaacaattctaa-cctattttctcttatttatctcttcccatc 21104034  T
Q  107 tattttatcttatttccactttatccactaaattctctaaatcctcaaaaca 158  Q
    ||||||||||||||| | | |  ||||||||| ||||||||  |||||||||    
T  21104035 tattttatcttatttactcctcttccactaaactctctaaactctcaaaaca 21104086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 7 - 199
Target Start/End: Original strand, 40909833 - 40910022
Alignment:
Q  7 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 106  Q
    |||| |||||||||||||||||||||||||||||   |||||||| |||  ||||| |||   |||||| |||| ||||||||||||||||||| |||||    
T  40909833 ctctcggttcttctctcctcttgttctccctttt---ccaaaacttgtttcacgtgtaaact-ttctaaccctactttctcctatttatctcttcccatc 40909928  T
Q  107 tattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaacttaat-tttatttctattttcaagacttattc 199  Q
    ||||||||||||||||  ||||  |||| ||| ||||||||| | ||||||| |||| || || ||| ||||||| || ||||||  |||||||    
T  40909929 tattttatcttatttcttcttttcccacaaaactctctaaattcacaaaacaacccctcatctaaatatttatttttactttcaaatcttattc 40910022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 15 - 199
Target Start/End: Original strand, 17334279 - 17334465
Alignment:
Q  15 tcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctag--tttctcctatttatctctttccatctatttt 112  Q
    ||||| ||||||||||||||||||||  ||||||||||||||||||| ||||  ||| | | | |||  ||||||||||||||||||| |||||||||||    
T  17334279 tcttcgctcctcttgttctcccttttctcccaaaactggttgtacgtaaaaactattatga-cttaggttttctcctatttatctcttcccatctatttt 17334377  T
Q  113 atcttatttccactttat-ccactaaattctctaaatcctcaaaacagccccacaacttaat-tttatttctattttcaagacttattc 199  Q
    ||||||||||| |||| | || | ||| ||||||||  ||||||||| |||| ||||| ||| ||||||| |||||||||  |||||||    
T  17334378 atcttatttcctctttttccctcaaaactctctaaaatctcaaaacaacccctcaactcaatatttattt-tattttcaaatcttattc 17334465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 36 - 166
Target Start/End: Original strand, 22354765 - 22354896
Alignment:
Q  36 ctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctct-ttccatctattttatcttatttccactttatccac 134  Q
    ||||||| ||||||||| | ||||||||||||||||||||||||||||||||||||||||||||  || ||| | |||||||||||||| || | |||||    
T  22354765 ctttttctccaaaactgatcgtacgtgaaaataattctaaacctagtttctcctatttatctctcctcaatccactttatcttatttcctctatttccac 22354864  T
Q  135 taaattc-tctaaatcctcaaaacagccccaca 166  Q
    |||| || ||||||| | | |||||||||||||    
T  22354865 taaactcttctaaattc-ctaaacagccccaca 22354896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 11 - 119
Target Start/End: Original strand, 16044035 - 16044143
Alignment:
Q  11 tggttcttctctcctcttgttctccctttttccccaaaactgg-ttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatctat 109  Q
    ||||||| |||| |||||||||||| ||||  || |||||| | ||||| ||||||| |||||||| |||| ||||||||||||||||||| ||||||||    
T  16044035 tggttctcctcttctcttgttctccattttctccaaaaacttgattgtatgtgaaaacaattctaa-cctattttctcctatttatctcttcccatctat 16044133  T
Q  110 tttatcttat 119  Q
    ||||||||||    
T  16044134 tttatcttat 16044143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 8 - 199
Target Start/End: Original strand, 19739815 - 19740004
Alignment:
Q  8 tcttggttcttctctcctcttgtt-ctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 106  Q
    ||||||||||||||| |||||||| ||||||||||| |||||||| |||  |||| ||||  ||||| | |||| |||||||||||||| || | | | |    
T  19739815 tcttggttcttctcttctcttgtttctccctttttctccaaaacttgtttcacgtaaaaactattctga-cctattttctcctatttatttcct-caacc 19739912  T
Q  107 tattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaacttaattttatttctattttcaagacttattc 199  Q
       ||||||||||||||||||| ||||||||| |||||||||  ||||||||| ||| || || ||| |||||| |||||||||  |||||||    
T  19739913 ctctttatcttatttccactttttccactaaactctctaaatattcaaaacagaccctcatctcaatattattt-tattttcaaatcttattc 19740004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 8 - 190
Target Start/End: Original strand, 27996868 - 27997049
Alignment:
Q  8 tcttggttcttctctcctcttgtt--ctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccat 105  Q
    ||||||||||||||| ||||||||  ||||||||||| |||||||| |||  |||| ||||  ||||| | |||| |||||||||||||| || | | |     
T  27996868 tcttggttcttctcttctcttgttttctccctttttctccaaaacttgtttcacgtaaaaactattctga-cctattttctcctatttatttcct-caac 27996965  T
Q  106 ctattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaacttaattttatttctattttcaa 190  Q
    |   ||||||||||||||||||  ||||||||| ||||||||| |||||||| ||||| || || ||| |||||| |||||||||    
T  27996966 cctctttatcttatttccacttattccactaaactctctaaattctcaaaactgcccctcatctcaatattattt-tattttcaa 27997049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 35811353 - 35811300
Alignment:
Q  7 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgt 61  Q
    |||||||||||| ||||||||||||||||| ||||| ||||||||||||||||||    
T  35811353 ctcttggttcttttctcctcttgttctccc-ttttctccaaaactggttgtacgt 35811300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 110 - 180
Target Start/End: Complemental strand, 43251105 - 43251034
Alignment:
Q  110 tttatcttatttccactttatccactaaattctctaaatcctcaaaaca-gccccacaacttaattttattt 180  Q
    ||||||||||||||||||  ||||||||| | |||||||  ||||||||  |||||||||||||||||||||    
T  43251105 tttatcttatttccacttattccactaaactgtctaaattatcaaaacatcccccacaacttaattttattt 43251034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 110 - 190
Target Start/End: Original strand, 6512816 - 6512895
Alignment:
Q  110 tttatcttatttccactttatccactaaattctctaaatcctcaaaacag-ccccacaacttaattttatttctattttcaa 190  Q
    ||||||||||| ||||||  ||||||||| ||||| ||| |||||||||| |||||||||||||| |||||| |||||||||    
T  6512816 tttatcttatt-ccacttattccactaaactctcttaattctcaaaacagcccccacaacttaatcttattt-tattttcaa 6512895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 153 - 198
Target Start/End: Original strand, 14186628 - 14186673
Alignment:
Q  153 aaaacagccccacaacttaattttatttctattttcaagacttatt 198  Q
    |||||||||||||| || ||| ||||||||||||||||||||||||    
T  14186628 aaaacagccccacatctcaatattatttctattttcaagacttatt 14186673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 110 - 199
Target Start/End: Original strand, 21368 - 21457
Alignment:
Q  110 tttatcttatttccactttatccactaaattc-tctaaatcctcaaaacag-ccccacaacttaattttatttctattttcaagacttattc 199  Q
    ||||||||||||||||||  ||||||||| || ||||||| | |||||||| |||||||||||||| |||||| |||||||||  |||||||    
T  21368 tttatcttatttccacttattccactaaactcttctaaattc-caaaacagtccccacaacttaatcttattt-tattttcaaatcttattc 21457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 110 - 199
Target Start/End: Original strand, 51993744 - 51993833
Alignment:
Q  110 tttatcttatttccactttatccactaaattc-tctaaatcctcaaaacagc-cccacaacttaattttatttctattttcaagacttattc 199  Q
    ||||||||||||||||||  ||||||||| || ||||||| | ||||||||| ||||||||||||| |||||| |||||||||  |||||||    
T  51993744 tttatcttatttccacttattccactaaactcttctaaattc-caaaacagctcccacaacttaatcttattt-tattttcaaatcttattc 51993833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 13591046 - 13590993
Alignment:
Q  7 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgt 61  Q
    |||||||||||||| || |||||||||||| ||||| | ||||||||||||||||    
T  13591046 ctcttggttcttctatcttcttgttctccc-ttttctcaaaaactggttgtacgt 13590993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 121; Significance: 7e-62; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 7 - 198
Target Start/End: Original strand, 16683 - 16878
Alignment:
Q  7 ctcttggttcttctctcctcttgtt--ctccctttttccccaaaactggttgtacgtgaaaa-taattctaaacctagtttctcctatttatctctttcc 103  Q
    ||||||||||| |||| ||||||||  ||||||||||| ||||||||||||||||||||||| |||||||||||||| |||||  |||||||||||| ||    
T  16683 ctcttggttctcctcttctcttgttttctccctttttctccaaaactggttgtacgtgaaaaataattctaaacctaatttctaatatttatctcttccc 16782  T
Q  104 atctattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaa-cttaattttatttctattttcaagacttatt 198  Q
    |||||||||||||||||||||||| |||||||||| ||||||||| ||||||| |||||||||| |||||| ||||||||||||||||||||||||    
T  16783 atctattttatcttatttccacttaatccactaaactctctaaattctcaaaatagccccacaatcttaatcttatttctattttcaagacttatt 16878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 121; Significance: 7e-62; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 7 - 198
Target Start/End: Complemental strand, 29189 - 28995
Alignment:
Q  7 ctcttggttcttctctcctcttgtt--ctccctttttccccaaaactggttgtacgtgaaaa-taattctaaacctagtttctcctatttatctctttcc 103  Q
    ||||||||||| |||| ||||||||  |||||||||| || |||||| |||||||||||||| |||||||||||||||||||||||||||||||||| ||    
T  29189 ctcttggttctcctcttctcttgttttctcccttttttcc-aaaactagttgtacgtgaaaaataattctaaacctagtttctcctatttatctcttccc 29091  T
Q  104 atctattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaa-cttaattttatttctattttcaagacttatt 198  Q
    |||||||||||||||||||||||| |||||||||| ||||||||| |||||||||||||||||| |||||| ||||||||| ||||||||||||||    
T  29090 atctattttatcttatttccacttaatccactaaactctctaaattctcaaaacagccccacaatcttaatcttatttctaatttcaagacttatt 28995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462 (Bit Score: 119; Significance: 1e-60; HSPs: 1)
Name: scaffold0462
Description:

Target: scaffold0462; HSP #1
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 7 - 198
Target Start/End: Original strand, 11302 - 11496
Alignment:
Q  7 ctcttggttcttctctcctcttgttctc-cctttttccccaaaactggttgtacgtgaaaa-taattctaaacctagtttctcctatttatctctttcca 104  Q
    ||||||||||| |||| |||||||| || || ||||| | |||| |||||||||||||||| |||||||||||||||||||||||||||||||||| |||    
T  11302 ctcttggttctcctcttctcttgttttctcccttttctcaaaaaatggttgtacgtgaaaaataattctaaacctagtttctcctatttatctcttccca 11401  T
Q  105 tctattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaa-cttaattttatttctattttcaagacttatt 198  Q
    ||||||||||||||||||||||| |||||||||| ||||||||| ||||||||||||||| || |||||| ||||||||||||||||||||||||    
T  11402 tctattttatcttatttccacttaatccactaaactctctaaattctcaaaacagccccaaaatcttaatcttatttctattttcaagacttatt 11496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 119; Significance: 1e-60; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 7 - 198
Target Start/End: Original strand, 2016 - 2209
Alignment:
Q  7 ctcttggttcttctctcctcttgttctc-cctttttccccaaaactggttgtacgtgaaaa-taattctaaacctagtttctcctatttatctctttcca 104  Q
    ||||||||||| |||| |||||||| || || ||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||| |||    
T  2016 ctcttggttctcctcttctcttgttttctcccttttctccaaaactggttgtacgtgaaaaataattttaaacctagtttctcctatttatctcttccca 2115  T
Q  105 tctattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaa-cttaattttatttctattttcaagacttatt 198  Q
    ||||||||||||||||||||| |||||||||||| ||||||||| |||||||||||||||||| |||||| ||||||| ||||||||||||||||    
T  2116 tctattttatcttatttccac-ttatccactaaactctctaaattctcaaaacagccccacaatcttaatcttatttccattttcaagacttatt 2209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0632 (Bit Score: 118; Significance: 4e-60; HSPs: 1)
Name: scaffold0632
Description:

Target: scaffold0632; HSP #1
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 7 - 198
Target Start/End: Original strand, 1244 - 1440
Alignment:
Q  7 ctcttggttcttctctcctcttgtt--ctccctttttccccaaaactggttgtacgtgaaaa-taattctaaacctagtttctcctatttatctctttcc 103  Q
    ||||||||||| |||| ||||||||  ||||||||||| |||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| ||    
T  1244 ctcttggttctcctcttctcttgttttctccctttttctccaaaactagttgtacgtgaaaaataattctaaacctagtttctcctatttatctcttccc 1343  T
Q  104 atctattttatcttatttccactttatccactaaattctctaaatcctcaaaacag-ccccacaa-cttaattttatttctattttcaagacttatt 198  Q
    |||||||||||||||||| ||||| |||||||||| ||||||||| |||||||||| |||| ||| |||||| ||||||||||||||||||||||||    
T  1344 atctattttatcttattttcacttaatccactaaactctctaaattctcaaaacagccccctcaatcttaatcttatttctattttcaagacttatt 1440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0436 (Bit Score: 115; Significance: 3e-58; HSPs: 1)
Name: scaffold0436
Description:

Target: scaffold0436; HSP #1
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 38 - 198
Target Start/End: Original strand, 9071 - 9233
Alignment:
Q  38 ttttccccaaaactggttgtacgtgaaaa-taattctaaacctagtttctcctatttatctctttccatctattttatcttatttccactttatccacta 136  Q
    ||||| ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||| ||||||||    
T  9071 ttttctccaaaactggttgtatgtgaaaaataattctaaacctagtttctcctatttatctcttcccttctattttatcttatttccacttaatccacta 9170  T
Q  137 aattctctaaatcctcaaaacagccccacaa-cttaattttatttctattttcaagacttatt 198  Q
    || ||||||||| |||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  9171 aactctctaaattctcaaaacagccccacaatcttaatcttatttctattttcaagacttatt 9233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 115; Significance: 3e-58; HSPs: 3)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 7 - 198
Target Start/End: Complemental strand, 21750 - 21556
Alignment:
Q  7 ctcttggttcttctctcctcttgttctcc-ctttttccccaaaactggttgtacgtgaaaa-taattctaaacctagtttctcctatttatctctttcca 104  Q
    ||||||||||| |||| |||||||| ||  | ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||     
T  21750 ctcttggttctcctcttctcttgttttcttccttttctccaaaactggttgtacgtgaaaaataattctaaacctagtttctcctatttatctcttccct 21651  T
Q  105 tctattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaa-cttaattttatttctattttcaagacttatt 198  Q
    ||||||||||||||||||||||| |||||||||| | ||||||| ||||||||| |||||||| |||||| ||||||||||||||||||||||||    
T  21650 tctattttatcttatttccacttaatccactaaactatctaaattctcaaaacaaccccacaatcttaatcttatttctattttcaagacttatt 21556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 82 - 199
Target Start/End: Complemental strand, 25173 - 25055
Alignment:
Q  82 tttctcctatttatctctttccatctattttatcttatttccactttat-ccactaaattctctaaatcctcaaaacagccccacaacttaat-tttatt 179  Q
    ||||||||||||||||||| |||||||||||||||||||||| |||| | |||| ||| ||||||||| ||||||||| |||| || || ||| ||||||    
T  25173 tttctcctatttatctcttcccatctattttatcttatttcctctttttcccacaaaactctctaaattctcaaaacaacccctcatctcaatatttatt 25074  T
Q  180 tctattttcaagacttattc 199  Q
    | |||||||||  |||||||    
T  25073 t-tattttcaaatcttattc 25055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 82 - 155
Target Start/End: Complemental strand, 15986 - 15912
Alignment:
Q  82 tttctcctatttatctctttccatctattttatcttatttccactttat-ccactaaattctctaaatcctcaaa 155  Q
    ||||||||||||||||||| |||||||||||||||||||||| |||| | |||| ||| ||||||||| ||||||    
T  15986 tttctcctatttatctcttcccatctattttatcttatttcctctttttcccacaaaactctctaaattctcaaa 15912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 93; Significance: 3e-45; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 7 - 163
Target Start/End: Complemental strand, 28674 - 28519
Alignment:
Q  7 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 106  Q
    |||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||   |||||||| || ||||||| ||||||||||| |||||    
T  28674 ctcttggttcttctctcctcttgttctccctttt-ctccaaaactggttgtacgtgaaaacttttctaaacttattttctccgatttatctcttcccatc 28576  T
Q  107 tattttatcttatttccactttatccactaaattctctaaatcctcaaaacagcccc 163  Q
    |||||||||||||||||||||| ||||| ||| ||||||| | ||||||||| ||||    
T  28575 tattttatcttatttccactttttccacaaaactctctaatttctcaaaacaacccc 28519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 92; Significance: 1e-44; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 83 - 199
Target Start/End: Complemental strand, 62225 - 62107
Alignment:
Q  83 ttctcctatttat--ctctttccatctattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaacttaattttattt 180  Q
    |||||||||||||  ||| | |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  62225 ttctcctatttatacctcctcccatctattttatcttatttccacttaatccactaaattctctaaatcctcaaaacagccccacaacttaatcttattt 62126  T
Q  181 ctattttcaagacttattc 199  Q
    |||||||||||||||||||    
T  62125 ctattttcaagacttattc 62107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 90; Significance: 2e-43; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 7 - 199
Target Start/End: Complemental strand, 54790 - 54599
Alignment:
Q  7 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 106  Q
    |||||||||||||| ||||||||||||||||||| | |||||| ||||||||||||||||   ||||||||||| ||||||||||||||||||| |||||    
T  54790 ctcttggttcttctatcctcttgttctccctttt-ctccaaaattggttgtacgtgaaaacttttctaaacctattttctcctatttatctcttcccatc 54692  T
Q  107 tattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaacttaat-tttatttctattttcaagacttattc 199  Q
    ||||||||||||||||| ||||  |||| ||| ||||||||| ||||||||| |||| || || ||| ||||||| |||||||||  |||||||    
T  54691 tattttatcttatttcctcttttcccacaaaactctctaaattctcaaaacaacccctcatctcaatatttattt-tattttcaaatcttattc 54599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290 (Bit Score: 89; Significance: 9e-43; HSPs: 1)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 7 - 163
Target Start/End: Original strand, 1146 - 1301
Alignment:
Q  7 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 106  Q
    ||||||||||||||||| ||||||||||| |||| | |||||||||||||||||||||| |||||||||||||||||||||||||||||| ||| |||||    
T  1146 ctcttggttcttctctcttcttgttctccatttt-ctccaaaactggttgtacgtgaaattaattctaaacctagtttctcctatttatcacttcccatc 1244  T
Q  107 tattttatcttatttccactttatccactaaattctctaaatcctcaaaacagcccc 163  Q
    |||||||||||||||||  |   ||||| ||| ||||||||| | ||||||||||||    
T  1245 tattttatcttatttcctttaattccacaaaactctctaaattcacaaaacagcccc 1301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0956 (Bit Score: 88; Significance: 3e-42; HSPs: 1)
Name: scaffold0956
Description:

Target: scaffold0956; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 7 - 198
Target Start/End: Original strand, 1156 - 1339
Alignment:
Q  7 ctcttggttcttctctcctcttgttctc-cctttttccccaaaactggttgtacgtgaaaa-taattctaaacctagtttctcctatttatctctttcca 104  Q
    |||||||||||||||| |||||||| || || ||||| ||||||||  ||||||||||||| |||||||||||||||||| ||||||||||||||| ||     
T  1156 ctcttggttcttctcttctcttgttttctcccttttctccaaaact--ttgtacgtgaaaaataattctaaacctagtttatcctatttatctcttccct 1253  T
Q  105 tctattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaa-cttaattttatttctattttcaagacttatt 198  Q
    ||||||||||||||||||||||| |||||||||| |         |||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  1254 tctattttatcttatttccacttaatccactaaact---------ctcaaaacagccccacaatcttaatcttatttctattttcaagacttatt 1339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 87; Significance: 1e-41; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 7 - 199
Target Start/End: Original strand, 9875 - 10066
Alignment:
Q  7 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 106  Q
    |||||||||||  ||||||||||||||||||||| | |||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| |||||    
T  9875 ctcttggttctcttctcctcttgttctccctttt-ctccaaaactggttgtacgtgaaaataattctaa-cctattttctcctatttatctcttcccatc 9972  T
Q  107 tattttatcttatttccactttat-ccactaaattctctaaatcctcaaaacagccccacaacttaat-tttatttctattttcaagacttattc 199  Q
    ||||||||||||||||| |||| | |||| ||| || |||||| ||||||||| |||| || || ||| ||||||| |||||||||  |||||||    
T  9973 tattttatcttatttcctctttttcccacaaaactcactaaattctcaaaacaacccctcatctcaatatttattt-tattttcaaatcttattc 10066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 87; Significance: 1e-41; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 7 - 199
Target Start/End: Original strand, 1632 - 1822
Alignment:
Q  7 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 106  Q
    |||||| ||||  ||||||||||||||||||||||||  ||||||| |||||||||||||||||||||| |||| |||||||||||||||| || |||||    
T  1632 ctcttgattctcttctcctcttgttctccctttttcc--aaaactgattgtacgtgaaaataattctaaccctattttctcctatttatctattcccatc 1729  T
Q  107 tattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaacttaat-tttatttctattttcaagacttattc 199  Q
    ||||||||||||||||| ||||  |||| ||| ||||||||| ||||||||| |||| || || ||| ||||||| |||||||||  |||||||    
T  1730 tattttatcttatttcctcttttcccacaaaactctctaaattctcaaaacaacccctcatctcaatatttattt-tattttcaaatcttattc 1822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 7 - 199
Target Start/End: Original strand, 7284 - 7474
Alignment:
Q  7 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 106  Q
    |||||| ||||  ||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||| |||||||||||||||| || ||||     
T  7284 ctcttgattctcttctcctcttgttctccctttttcc--aaaactgattgtacgtgaaaataattctaaacctattttctcctatttatctattcccata 7381  T
Q  107 tattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaacttaat-tttatttctattttcaagacttattc 199  Q
    ||||||||||||||||| ||||  |||| ||| ||||||||| ||||||||| |||| || || ||| ||||||| |||||||||  |||||||    
T  7382 tattttatcttatttcctcttttcccacaaaactctctaaattctcaaaacaacccctcatctcaatatttattt-tattttcaaatcttattc 7474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 86; Significance: 5e-41; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 7 - 199
Target Start/End: Complemental strand, 220313 - 220122
Alignment:
Q  7 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 106  Q
    |||||||||||||||||||| ||||||||||||| | |||||| || |||||||||||||||||| |||||||| |||||||||||||||||||||||      
T  220313 ctcttggttcttctctcctcctgttctccctttt-ctccaaaattgattgtacgtgaaaataattttaaacctattttctcctatttatctctttccaat 220215  T
Q  107 tattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaacttaat-tttatttctattttcaagacttattc 199  Q
    ||||||||||| ||||| ||||  |||| ||| ||||||||| ||||||||| |||| || || ||| ||||||| |||||||||  |||||||    
T  220214 tattttatcttttttcctcttttcccacaaaactctctaaattctcaaaacaacccctcatctaaatatttattt-tattttcaaatcttattc 220122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 85; Significance: 2e-40; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 73 - 196
Target Start/End: Original strand, 6471 - 6595
Alignment:
Q  73 taaacctagtttctcctatttatctctttccatctattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccaca-actta 171  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||||| |||||||||| || |||||| |||||||||||||||||  ||||    
T  6471 taaacctagtttctcctatttatctcttcccttctattttatcttatttccacttaatccactaaactcactaaattctcaaaacagccccacactctta 6570  T
Q  172 attttatttctattttcaagactta 196  Q
    || ||||||||||||||||||||||    
T  6571 atcttatttctattttcaagactta 6595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 85; Significance: 2e-40; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 7 - 163
Target Start/End: Complemental strand, 118733 - 118578
Alignment:
Q  7 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 106  Q
    ||||||||||||||||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| |||||    
T  118733 ctcttggttcttctctcctcttgttctacctttt-cgccaaaactggttgtacgtgaaaataattctaaacctagtttctcctttttatcacttcccatc 118635  T
Q  107 tattttatcttatttccactttatccactaaattctctaaatcctcaaaacagcccc 163  Q
    | |||| ||||||||||  |   ||||| ||| ||||||||| | ||||||||||||    
T  118634 ttttttttcttatttcctttaattccacaaaactctctaaattcacaaaacagcccc 118578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 84; Significance: 8e-40; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 83 - 199
Target Start/End: Original strand, 106159 - 106277
Alignment:
Q  83 ttctcctatttatctct--ttccatctattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaacttaattttattt 180  Q
    ||||||||||||| |||  | |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  106159 ttctcctatttatatctcctcccatctattttatcttatttccacttaatccactaaattctctaaatcctcaaaacagccccacaacttaatcttattt 106258  T
Q  181 ctattttcaagacttattc 199  Q
    ||||||||||  |||||||    
T  106259 ctattttcaaatcttattc 106277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0480 (Bit Score: 83; Significance: 3e-39; HSPs: 1)
Name: scaffold0480
Description:

Target: scaffold0480; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 7 - 158
Target Start/End: Original strand, 10411 - 10562
Alignment:
Q  7 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaa-taattctaaacctagttt-ctcctatttatctctttcca 104  Q
    ||||||||||||||||||||| ||| |||||||||||  |||||| |||||||||||||| |||||||||||||||||| ||||||||||||| || |||    
T  10411 ctcttggttcttctctcctctagttatccctttttcc--aaaacttgttgtacgtgaaaaataattctaaacctagttttctcctatttatctattccca 10508  T
Q  105 tctattttatcttatttccactttatccactaaattctctaaatcctcaaaaca 158  Q
    |||||||||||||||||| |||||  |||| ||| ||||||||| |||||||||    
T  10509 tctattttatcttatttctacttttcccacaaaactctctaaattctcaaaaca 10562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 83; Significance: 3e-39; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 82 - 199
Target Start/End: Original strand, 7190 - 7307
Alignment:
Q  82 tttctcctatttatctctttccatctattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaacttaat-tttattt 180  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||| |||||||    
T  7190 tttctcctatttatctcttcccatctattttatcttatttccacttaatccactaaattctctaaattctcaaaacagccccacaacttaatctttattt 7289  T
Q  181 ctattttcaagacttattc 199  Q
     |||||||||  |||||||    
T  7290 -tattttcaaatcttattc 7307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 83; Significance: 3e-39; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 7 - 199
Target Start/End: Original strand, 447486 - 447677
Alignment:
Q  7 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaat-aattctaaacctagtttctcctatttatctctttccat 105  Q
    |||||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||| |||||| |||||| |||||||||||||||||||  |||    
T  447486 ctcttggttcttctctcctcttgttctccctttt-ctacaaaactggttgtacgtgaaaataaattct-aacctattttctcctatttatctcttctcat 447583  T
Q  106 ctattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaacttaat-tttatttctattttcaagacttattc 199  Q
    |||||||||||||||||| ||||  |||| ||| ||||||||| || |||||| |||| || || ||| ||||||| |||||||||  |||||||    
T  447584 ctattttatcttatttcctcttttcccacaaaactctctaaattctaaaaacaacccctcatctcaatatttattt-tattttcaaatcttattc 447677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 7 - 199
Target Start/End: Original strand, 498396 - 498586
Alignment:
Q  7 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 106  Q
    |||||||||||||||||||| ||||||||||||| |  ||||| ||||||||||||||||||||||||| |||| |||||||||||||||||||  ||||    
T  498396 ctcttggttcttctctcctcatgttctccctttt-cttcaaaattggttgtacgtgaaaataattctaa-cctattttctcctatttatctcttctcatc 498493  T
Q  107 tattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaacttaat-tttatttctattttcaagacttattc 199  Q
     |||||||| ||||||| ||||  |||| ||| ||||||||| ||||||||| |||| || || ||| ||||||| |||||||||  |||||||    
T  498494 cattttatcgtatttcctcttttcccacaaaactctctaaattctcaaaacaacccctcatctcaatatttattt-tattttcaaatcttattc 498586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 8 - 199
Target Start/End: Original strand, 499135 - 499324
Alignment:
Q  8 tcttggttcttctctcctcttgtt-ctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 106  Q
    ||||||||||||||| |||||||| ||||||||||| |||||||| |||  |||  ||||  ||||| | |||| |||||||||| ||| || | | | |    
T  499135 tcttggttcttctcttctcttgtttctccctttttctccaaaacttgtttcacgcaaaaactattctga-cctattttctcctatatatttcct-caacc 499232  T
Q  107 tattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaacttaattttatttctattttcaagacttattc 199  Q
       ||||||||||||||||||  ||||||||| ||||||||| ||||||||||| || || || ||| |||||| |||||||||  |||||||    
T  499233 gtctttatcttatttccacttattccactaaactctctaaattctcaaaacagcacctcatctcaatattattt-tattttcaaatcttattc 499324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0282 (Bit Score: 82; Significance: 1e-38; HSPs: 1)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 7 - 199
Target Start/End: Complemental strand, 17313 - 17122
Alignment:
Q  7 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 106  Q
    |||||||||||||||||||||||||||||||||| | ||||||||| |||||| ||||||   ||||||||||| ||||||||||||||||||| |||||    
T  17313 ctcttggttcttctctcctcttgttctccctttt-ctccaaaactgattgtacatgaaaaaccttctaaacctattttctcctatttatctcttcccatc 17215  T
Q  107 tattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaacttaat-tttatttctattttcaagacttattc 199  Q
    ||||||||||||||| | | |  ||||||||  ||||||||| ||||||||| |||| || || ||| ||||||| |||||||||  |||||||    
T  17214 tattttatcttatttactcctcttccactaatctctctaaattctcaaaacaacccctcatctcaatatttattt-tattttcaaatcttattc 17122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 81; Significance: 5e-38; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 7 - 163
Target Start/End: Original strand, 4104 - 4259
Alignment:
Q  7 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 106  Q
    |||||||||||||||||||||||||||||||||| | ||||||||| |||||||||||||   |||||||| || ||||||||||||||||||| |||||    
T  4104 ctcttggttcttctctcctcttgttctccctttt-ctccaaaactgattgtacgtgaaaaactttctaaacatattttctcctatttatctcttcccatc 4202  T
Q  107 tattttatcttatttccactttatccactaaattctctaaatcctcaaaacagcccc 163  Q
    ||||||||| ||||| | | |  ||||||||| ||||||||| ||||||||| ||||    
T  4203 tattttatcctatttactcctcttccactaaactctctaaattctcaaaacaacccc 4259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 80; Significance: 2e-37; HSPs: 2)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 8 - 126
Target Start/End: Original strand, 23191 - 23309
Alignment:
Q  8 tcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagttt-ctcctatttatctctttccatc 106  Q
    ||||||||||||||||||||||||||||||||| | |||||||| ||||||| |||||| ||||||||||||||||| ||||| |||||||||| |||||    
T  23191 tcttggttcttctctcctcttgttctccctttt-ctccaaaacttgttgtacatgaaaacaattctaaacctagttttctcctgtttatctcttcccatc 23289  T
Q  107 tattttatcttatttccact 126  Q
    ||||||||||||||||||||    
T  23290 tattttatcttatttccact 23309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #2
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 28 - 199
Target Start/End: Original strand, 14336 - 14507
Alignment:
Q  28 tgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagttt-ctcctatttatctctttccatctattttatcttatttccact 126  Q
    ||||||||||||| | |||||||| |||||||||||||| |||  |||||||||||| |||||||||||||||| |||||||||||||||||||||| ||    
T  14336 tgttctccctttt-ctccaaaacttgttgtacgtgaaaacaataataaacctagttttctcctatttatctcttcccatctattttatcttatttcctct 14434  T
Q  127 ttatccactaaattctctaaatcctcaaaacagccccacaacttaat-tttatttctattttcaagacttattc 199  Q
    || ||||||||| ||||||||| || |||||| |||| || || ||| ||||||| |||||||||  |||||||    
T  14435 ttttccactaaactctctaaattcttaaaacaacccctcatctcaatatttattt-tattttcaaatcttattc 14507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 79; Significance: 8e-37; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 38 - 199
Target Start/End: Complemental strand, 191758 - 191597
Alignment:
Q  38 ttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatctattttatcttatttccactttatccactaa 137  Q
    ||||| |||||| || ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||| ||||  |||| ||    
T  191758 ttttctccaaaattgattgtacgtgaaaataattctaaacctattttctcctatttatctcttcccatctattttatcttatttcctcttttcccacaaa 191659  T
Q  138 attctctaaatcctcaaaacagccccacaacttaat-tttatttctattttcaagacttattc 199  Q
    |||||||||||  |||||||| |||| || || ||| ||||||| |||||||||  |||||||    
T  191658 attctctaaattttcaaaacaacccctcatctcaatatttattt-tattttcaaatcttattc 191597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 77; Significance: 1e-35; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 7 - 158
Target Start/End: Complemental strand, 75004 - 74852
Alignment:
Q  7 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctag-tttctcctatttatctctttccat 105  Q
    |||||||||||||||| |||||||||||||||||  || ||||||| || |||||||||| | |||||||||||| ||||| ||||||||||||| || |    
T  75004 ctcttggttcttctcttctcttgttctcccttttctccaaaaactgattctacgtgaaaacatttctaaacctagttttctactatttatctcttcccgt 74905  T
Q  106 ctattttatcttatttccactttatccactaaattctctaaatcctcaaaaca 158  Q
    |||||||||||||||||| ||||  |||| ||| ||||||||| |||||||||    
T  74904 ctattttatcttatttcctcttttcccacaaaactctctaaattctcaaaaca 74852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0877 (Bit Score: 76; Significance: 5e-35; HSPs: 1)
Name: scaffold0877
Description:

Target: scaffold0877; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 30 - 163
Target Start/End: Complemental strand, 1964 - 1829
Alignment:
Q  30 ttctccctttttccccaaaactggttgtacgtgaaaa-taattctaaacctagttt-ctcctatttatctctttccatctattttatcttatttccactt 127  Q
    |||||||||| ||  ||||| |||||||||||||||| |||||||||||||||||| |||||||||||||||| |||||||||||||||||||||| |||    
T  1964 ttctccctttatcttcaaaagtggttgtacgtgaaaaataattctaaacctagttttctcctatttatctcttcccatctattttatcttatttcctctt 1865  T
Q  128 tatccactaaattctctaaatcctcaaaacagcccc 163  Q
    | ||||| ||| ||||||||| | ||||||||||||    
T  1864 tttccacaaaactctctaaattcacaaaacagcccc 1829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 75; Significance: 2e-34; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 7 - 163
Target Start/End: Complemental strand, 165592 - 165440
Alignment:
Q  7 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 106  Q
    ||||||||||||||||||||||||||||||||||   |||||||| |||  |||| |||| |||||||| |||| ||||||||||||||||||| |||||    
T  165592 ctcttggttcttctctcctcttgttctccctttt---ccaaaacttgtttcacgtaaaaacaattctaa-cctattttctcctatttatctcttcccatc 165497  T
Q  107 tattttatcttatttccactttatccactaaattctctaaatcctcaaaacagcccc 163  Q
    ||||||||||||||| | | |  ||||||||| ||||||||| ||||||||| ||||    
T  165496 tattttatcttatttactcctcttccactaaactctctaaattctcaaaacaacccc 165440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 15 - 199
Target Start/End: Complemental strand, 13617 - 13431
Alignment:
Q  15 tcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctag--tttctcctatttatctctttccatctatttt 112  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||| ||||  ||||| | | |||  ||||||||||||||||||| |||||||||||    
T  13617 tcttctctcctcttgttctcccttttctcccaaaactggttgtacgtaaaaactattctga-cttaggttttctcctatttatctcttaccatctatttt 13519  T
Q  113 atcttatttccactttat-ccactaaattctctaaatcctcaaaacagccccacaacttaat-tttatttctattttcaagacttattc 199  Q
    ||||||||||| |||| | |||| ||| ||||||||| ||| ||||| |||| || || ||| ||||||| |||||||||  |||||||    
T  13518 atcttatttcctctttttcccacaaaactctctaaattctccaaacaacccctcatctcaatatttattt-tattttcaaatcttattc 13431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0914 (Bit Score: 74; Significance: 8e-34; HSPs: 1)
Name: scaffold0914
Description:

Target: scaffold0914; HSP #1
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 7 - 199
Target Start/End: Original strand, 2717 - 2908
Alignment:
Q  7 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 106  Q
    ||||||||||||||||||||||||||||||||||  || |||||||||||||||| |||| ||| || ||| || |||||||||||||||| || |||||    
T  2717 ctcttggttcttctctcctcttgttctcccttttctccaaaaactggttgtacgtaaaaacaatact-aacatattttctcctatttatctattcccatc 2815  T
Q  107 tattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaacttaat-tttatttctattttcaagacttattc 199  Q
    ||||||| ||||||||| |||| |||   ||| ||||||||| ||||||||| |||| || || ||| ||||||| |||||||||  |||||||    
T  2816 tattttaacttatttcctctttttcccaaaaactctctaaattctcaaaacaacccctcatctcaatatttattt-tattttcaaatcttattc 2908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 74; Significance: 8e-34; HSPs: 1)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 7 - 199
Target Start/End: Original strand, 602 - 799
Alignment:
Q  7 ctcttggttcttctctcctcttg----ttctccctttttccccaaaactggttgtacgtgaaaa-taattctaaacctagtttctcctatttatctcttt 101  Q
    ||||||||||||| || ||||||    ||||||||||||| ||||||||| | ||||||||||| |||||||||||||| |||| |||||||||||| |     
T  602 ctcttggttcttcccttctcttggtttttctccctttttctccaaaactgatcgtacgtgaaaaataattctaaacctattttcccctatttatctcctc 701  T
Q  102 ccatctattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaacttaat-tttatttctattttcaagacttattc 199  Q
    |||||||||||||||||||||| ||||  |||| ||| ||||||||| ||||||||| |||| || || ||| ||||||| |||||||||  |||||||    
T  702 ccatctattttatcttatttcctcttttcccacaaaactctctaaattctcaaaacaacccctcatctcaatatttattt-tattttcaaatcttattc 799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 71; Significance: 5e-32; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 7 - 148
Target Start/End: Complemental strand, 37261 - 37122
Alignment:
Q  7 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 106  Q
    ||||||||| ||||||||||||||| |||||||| | |||||| ||||||||||||||||||||||||| |||| ||||||| ||||||||||| |||||    
T  37261 ctcttggtttttctctcctcttgttttccctttt-ctccaaaattggttgtacgtgaaaataattctaa-cctattttctcc-atttatctcttcccatc 37165  T
Q  107 tattttatcttatttccactttat-ccactaaattctctaaat 148  Q
    ||||||||||||||||| |||| | |||| ||| |||||||||    
T  37164 tattttatcttatttcctctttttcccacaaaactctctaaat 37122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 7 - 158
Target Start/End: Original strand, 16409 - 16556
Alignment:
Q  7 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 106  Q
    ||||||||||||||||||||||||||||||||||   |||||||| |||  |||| |||| |||||||| |||| ||||||||||||||||||| |||||    
T  16409 ctcttggttcttctctcctcttgttctccctttt---ccaaaacttgtttcacgtaaaaacaattctaa-cctattttctcctatttatctcttcccatc 16504  T
Q  107 tattttatcttatttccactttatccactaaattctctaaatcctcaaaaca 158  Q
    |||||| |||||||| | | |  ||||||||| ||||||||| |||||||||    
T  16505 tattttttcttatttactcctcttccactaaactctctaaattctcaaaaca 16556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 66; Significance: 5e-29; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 15 - 199
Target Start/End: Original strand, 22902 - 23088
Alignment:
Q  15 tcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctag--tttctcctatttatctctttccatctatttt 112  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||| ||||  ||||| | | |||  ||||||||||||||||||| |||||||||||    
T  22902 tcttctctcctcttgttctcccttttctcccaaaactggttgtacgtaaaaactattctga-cttaggttttctcctatttatctcttaccatctatttt 23000  T
Q  113 atcttatttccactttat-ccactaaattctctaaatcctcaaaacagccccacaacttaat-tttatttctattttcaagacttattc 199  Q
    ||||||||||| |||| | |||| ||| ||||||||| ||| ||||| |||| || || ||| ||||||| |||||||||  |||||||    
T  23001 atcttatttcctctttttcccacaaaactctctaaattctccaaacaacccctcatctcaatatttattt-tattttcaaatcttattc 23088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1835 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold1835
Description:

Target: scaffold1835; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 7 - 158
Target Start/End: Original strand, 281 - 432
Alignment:
Q  7 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaa-taattctaaacctagtttctcctatttatctctttccat 105  Q
    ||||| |||||||||| ||| ||||||||||||| | ||||||||||||||||||||||| |  ||  ||||||| ||||| ||||||||||||| ||||    
T  281 ctctttgttcttctcttctcgtgttctccctttt-ctccaaaactggttgtacgtgaaaacttttttaaaacctattttcttctatttatctcttcccat 379  T
Q  106 ctattttatcttatttccactttatccactaaattctctaaatcctcaaaaca 158  Q
     ||||||||||||||||| ||||  |||| ||| ||||||||| |||||||||    
T  380 atattttatcttatttcctcttttcccacaaaactctctaaattctcaaaaca 432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0256 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0256
Description:

Target: scaffold0256; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 9 - 199
Target Start/End: Complemental strand, 1820 - 1631
Alignment:
Q  9 cttggttcttctctcctcttgtt--ctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 106  Q
    ||||||||||||||  |||||||  ||||||||||| |||||||| |||  |||||||||   ||||||||||||||||||||||||||||| | | |||    
T  1820 cttggttcttctcttatcttgtttcctccctttttctccaaaacttgtttcacgtgaaaact-ttctaaacctagtttctcctatttatctc-tccaatc 1723  T
Q  107 tattttatcttatttccactttatccactaaattc-tctaaatcctcaaaacagccccacaacttaattttatttctattttcaagacttattc 199  Q
    ||||||||||||||||| |||  ||||||||| || ||||||| | ||||||||||||||| || ||| |||||| |||||||||  |||||||    
T  1722 tattttatcttatttcctcttattccactaaactcttctaaattc-caaaacagccccacatctcaatattattt-tattttcaaatcttattc 1631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 61; Significance: 4e-26; HSPs: 2)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 15 - 199
Target Start/End: Complemental strand, 33639 - 33452
Alignment:
Q  15 tcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctag--tttctcctatt--tatctctttccatctatt 110  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||| ||||  ||||| ||| |||  |||||||||||  ||||||||||||||||||    
T  33639 tcttctctcctcttgttctcccttttctcccaaaactggttgtacgtaaaaactattct-aacttaggttttctcctatttatatctctttccatctatt 33541  T
Q  111 ttatcttatttccactttatcc-actaaattctctaaatcctcaaaacagccccacaacttaat-tttatttctattttcaagacttattc 199  Q
    |||||||| |||| |||| ||| || ||| ||||||||| | |||||||||||| || || ||| ||||||| |||||||||  |||||||    
T  33540 ttatctta-ttcctctttttccaacaaaactctctaaattcacaaaacagcccctcatctcaatatttattt-tattttcaaatcttattc 33452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 180
Target Start/End: Complemental strand, 31338 - 31172
Alignment:
Q  17 ttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctag--tttctcctatttat--ctctttccatctatttt 112  Q
    ||||||||||||||||||||| ||  ||||||||| ||||||||| ||||  ||||| | | |||  ||||||||||||||  |||||||||||||||||    
T  31338 ttctctcctcttgttctccctcttctcccaaaactagttgtacgtaaaaactattctga-cttaggttttctcctatttatatctctttccatctatttt 31240  T
Q  113 atcttatttccactttatcc-actaaattctctaaatcctcaaaacagccccacaacttaattttattt 180  Q
    |||||||| || |||| ||| || | | ||||||||| | |||||||||||| || || ||| ||||||    
T  31239 atcttatt-cctctttttcccacaacactctctaaattcacaaaacagcccctcatctcaatattattt 31172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0500 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0500
Description:

Target: scaffold0500; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 7 - 199
Target Start/End: Original strand, 8471 - 8659
Alignment:
Q  7 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 106  Q
    ||||||||||||||||||||||||| ||||||||   |||||||| |||  |||| |||| |||||||| |||| || ||||||||||||||||  ||||    
T  8471 ctcttggttcttctctcctcttgttatccctttt---ccaaaacttgtttcacgtaaaaacaattctaa-cctatttcctcctatttatctcttctcatc 8566  T
Q  107 tattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaacttaat-tttatttctattttcaagacttattc 199  Q
    ||||||||||||||| | | |  ||||||||| |||||||||  |||||||| |||| || || ||| ||||||| |||||||||  |||||||    
T  8567 tattttatcttatttactcctcttccactaaactctctaaattttcaaaacaacccctcatctcaatatttattt-tattttcaaatcttattc 8659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 60; Significance: 2e-25; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 38 - 199
Target Start/End: Complemental strand, 203479 - 203318
Alignment:
Q  38 ttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatctattttatcttatttccac-tttatccacta 136  Q
    ||||| |||||||||   |||||||||||||||||||| |||| ||||||||||||||||||| |||||||||||||||||||||| | ||| ||||| |    
T  203479 ttttctccaaaactgaacgtacgtgaaaataattctaa-cctattttctcctatttatctcttcccatctattttatcttatttcctcttttttccacaa 203381  T
Q  137 aattctctaaatcctcaaaacagccccacaacttaat-tttatttctattttcaagacttattc 199  Q
    || |||||||||  |||||||| |||| || || ||| ||||||| |||||||||  |||||||    
T  203380 aactctctaaattatcaaaacaacccctcatctcaatatttattt-tattttcaaatcttattc 203318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 75 - 199
Target Start/End: Original strand, 79455 - 79579
Alignment:
Q  75 aacctagtttctcctatttatctctt-tccatctattttatcttatttccactttatccactaaat-tctctaaatcctcaaaacagccccacaacttaa 172  Q
    |||||||| |||||||||||| |||  || ||||||||||||||||| || |||| ||| | |||  ||||||||  ||||||| |||||||| ||||||    
T  79455 aacctagtctctcctatttatatctcctctatctattttatcttatt-cctctttttcccccaaaactctctaaaatctcaaaagagccccaccacttaa 79553  T
Q  173 ttttatttctattttcaagacttattc 199  Q
    | ||||| ||||| |||||||||||||    
T  79554 tcttatt-ctattatcaagacttattc 79579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 59; Significance: 7e-25; HSPs: 1)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 7 - 199
Target Start/End: Original strand, 12470 - 12658
Alignment:
Q  7 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 106  Q
    |||||||||||||||||||||||||||||||||||  |||||||| ||||||||| ||||  ||| |  ||||| ||||||||||||||||| |  |  |    
T  12470 ctcttggttcttctctcctcttgttctcccttttt--ccaaaacttgttgtacgtaaaaactattat-gacctattttctcctatttatctcctcacccc 12566  T
Q  107 tattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaacttaat-tttatttctattttcaagacttattc 199  Q
    |  ||||||||||||||||||  ||||||||| ||||||||| ||||||||| |||| || || ||| ||||||| |||||||||  |||||||    
T  12567 t-ctttatcttatttccacttattccactaaactctctaaattctcaaaacaacccctcatctcaatatttattt-tattttcaaatcttattc 12658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1419 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold1419
Description:

Target: scaffold1419; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 7 - 128
Target Start/End: Original strand, 1029 - 1150
Alignment:
Q  7 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 106  Q
    ||||| ||||| ||||  ||||||||||||||||   | ||||||| |||||||||||||   ||||||||||| ||||||||||||||||||| |||||    
T  1029 ctctttgttctcctcttttcttgttctcccttttctacaaaaactgcttgtacgtgaaaaactttctaaacctattttctcctatttatctcttcccatc 1128  T
Q  107 tattttatcttatttccacttt 128  Q
    |||| |||||||||||| ||||    
T  1129 tattctatcttatttcctcttt 1150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 8 - 163
Target Start/End: Original strand, 4939 - 5095
Alignment:
Q  8 tcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtt-tctcctatttatctct-ttccat 105  Q
    |||||||||||||||| ||||||||||||||||  ||||||| || |||||||||||||   |||||||||||||| || ||||||||| |||  || ||    
T  4939 tcttggttcttctctcttcttgttctcccttttctcccaaaagtgattgtacgtgaaaacttttctaaacctagttctcacctatttatatctcctctat 5038  T
Q  106 ctattttatcttatttccactttatccactaaattctctaaatcctcaaaacagcccc 163  Q
    ||||| ||||||| |||| |||| ||||| ||| ||||||||| | ||||||||||||    
T  5039 ctattctatctta-ttcctctttttccacaaaactctctaaattcacaaaacagcccc 5095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 8 - 199
Target Start/End: Complemental strand, 3982 - 3789
Alignment:
Q  8 tcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtt-tctcctatttatctct-ttccat 105  Q
    |||||||||||||||| ||||||||||||||||  ||||||| || |||||||||||||   || ||||||||||| || ||||||||| |||  || ||    
T  3982 tcttggttcttctctcttcttgttctcccttttctcccaaaagtgattgtacgtgaaaacttttttaaacctagttctcacctatttatatctcctctat 3883  T
Q  106 ctattttatcttatttccactttat-ccactaaattctctaaatcctcaaaacagccccacaacttaat-tttatttctattttcaagacttattc 199  Q
    ||||| ||||||| |||| |||| | |||| ||| ||||||||| | |||||||||||| || || ||| ||||||| |||||||||  |||||||    
T  3882 ctattctatctta-ttcctctttttcccacaaaactctctaaattcacaaaacagcccctcatctcaatatttattt-tattttcaaatcttattc 3789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 82 - 163
Target Start/End: Complemental strand, 18753 - 18671
Alignment:
Q  82 tttctcctatttatctctttccatctattttatcttatttccactttatc-cactaaattctctaaatcctcaaaacagcccc 163  Q
    ||||||||||||||||||| |||||||||||||||||||||| |||| || ||| ||| ||||||||| ||||||||| ||||    
T  18753 tttctcctatttatctcttcccatctattttatcttatttcctctttttcgcacaaaactctctaaattctcaaaacaacccc 18671  T

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Target: scaffold0750 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0750
Description:

Target: scaffold0750; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 70 - 158
Target Start/End: Original strand, 4680 - 4769
Alignment:
Q  70 ttctaaacctagtttctcctatttatctctttccatctattttatcttatttccactttat-ccactaaattctctaaatcctcaaaaca 158  Q
    ||||||||||| | ||||||||||||||||| |||||||||||||||||||||  |||| | |||| ||| ||||||||| |||||||||    
T  4680 ttctaaacctattctctcctatttatctcttcccatctattttatcttatttcgtctttttcccacaaaactctctaaattctcaaaaca 4769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0708 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0708
Description:

Target: scaffold0708; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 82 - 199
Target Start/End: Complemental strand, 1502 - 1384
Alignment:
Q  82 tttctcctatttatctctttccatctattttatcttatttccac-tttatccactaaattctctaaatcctcaaaacagccccacaacttaat-tttatt 179  Q
    ||||||||||||||||||| |||||||||||||||||||||  | ||| ||||| ||| ||||||||  ||||||||| |||| ||||| ||| ||||||    
T  1502 tttctcctatttatctcttcccatctattttatcttatttcatcttttttccacaaaagtctctaaaatctcaaaacaacccctcaactcaatatttatt 1403  T
Q  180 tctattttcaagacttattc 199  Q
    | |||||||||  |||||||    
T  1402 t-tattttcaaatcttattc 1384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0686 (Bit Score: 44; Significance: 6e-16; HSPs: 2)
Name: scaffold0686
Description:

Target: scaffold0686; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 8 - 199
Target Start/End: Original strand, 2453 - 2648
Alignment:
Q  8 tcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctag--tttctcctatttat--ctctttcc 103  Q
    |||||||||||||||| ||||||||||||||||  ||||||| |  |||||||| ||||  ||| | | | |||  ||||||||||||||  ||||||||    
T  2453 tcttggttcttctctcttcttgttctcccttttctcccaaaagttattgtacgtaaaaactattttga-cttaggttttctcctatttatatctctttcc 2551  T
Q  104 atctattttatcttatttccactttat-ccactaaattctctaaatcctcaaaacagccccacaacttaat-tttatttctattttcaagacttattc 199  Q
    || ||||||||||||||||| |||| | |||| ||| ||||||||  ||||||||| |||| || || ||| ||||||| |||||||||  |||||||    
T  2552 atttattttatcttatttcctctttttcccacaaaactctctaaaatctcaaaacaacccctcatctcaatatttattt-tattttcaaatcttattc 2648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0686; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 163
Target Start/End: Original strand, 2254 - 2413
Alignment:
Q  8 tcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctag--tttctcctatttat--ctctttcc 103  Q
    |||||||||||||||| ||||||||||||||||  ||||||| |  |||||||| ||||  ||| | | | |||  ||||||||||||||  ||||||||    
T  2254 tcttggttcttctctcttcttgttctcccttttctcccaaaagttattgtacgtaaaaactattttga-cttaggttttctcctatttatatctctttcc 2352  T
Q  104 atctattttatcttatttccactttat-ccactaaattctctaaatcctcaaaacagcccc 163  Q
    || ||||||||||||||||| |||| | |||| ||| ||||||||  ||||||||| ||||    
T  2353 atttattttatcttatttcctctttttcccacaaaactctctaaaatctcaaaacaacccc 2413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 110 - 180
Target Start/End: Original strand, 22364 - 22435
Alignment:
Q  110 tttatcttatttccactttatccactaaattctctaaatcctcaaaacag-ccccacaacttaattttattt 180  Q
    ||||||||||||||||||  ||||||||| ||||||||| |||||||||| |||||||||||||| ||||||    
T  22364 tttatcttatttccacttattccactaaactctctaaattctcaaaacagcccccacaacttaatcttattt 22435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 163
Target Start/End: Original strand, 31188 - 31344
Alignment:
Q  10 ttggttcttctctcctcttgtt--ctccctttttccccaaaa-ctggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 106  Q
    ||||||||||||| ||||||||  ||||||||||| |||||| | |||| ||||||||||  ||||||| | | ||||||||||||||| ||  || | |    
T  31188 ttggttcttctcttctcttgttttctccctttttctccaaaaacaggttctacgtgaaaactattctaacctttgtttctcctatttatttc-ctcaacc 31286  T
Q  107 tattttatcttatttccactttatccactaaattc-tctaaatcctcaaaacagcccc 163  Q
       ||||||||||||||||||  ||||||||| || ||||||| ||||||||||||||    
T  31287 ctctttatcttatttccacttattccactaaactcttctaaattctcaaaacagcccc 31344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 109 - 199
Target Start/End: Original strand, 56120 - 56209
Alignment:
Q  109 ttttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaacttaattttatttctattttcaagacttattc 199  Q
    |||||||||||||||||||  ||||||||| ||||||||| |||||||||||||| || || ||| |||||| |||||||||  |||||||    
T  56120 ttttatcttatttccacttattccactaaactctctaaattctcaaaacagcccctcatctcaatattattt-tattttcaaatcttattc 56209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 120
Target Start/End: Original strand, 98021 - 98135
Alignment:
Q  8 tcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtt-tctcctatttatctct-ttccat 105  Q
    |||||||||||||||| ||||||||||||||||  ||||||| || |||||||||||||   || ||||||||||| || ||||||||| |||  || ||    
T  98021 tcttggttcttctctcttcttgttctcccttttctcccaaaagtgattgtacgtgaaaacttttttaaacctagttctcacctatttatatctcctctat 98120  T
Q  106 ctattttatcttatt 120  Q
    ||||| |||||||||    
T  98121 ctattctatcttatt 98135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 120
Target Start/End: Original strand, 107299 - 107413
Alignment:
Q  8 tcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtt-tctcctatttatctct-ttccat 105  Q
    |||||||||||||||| ||||||||||||||||  ||||||| || |||||||||||||   || ||||||||||| || ||||||||| |||  || ||    
T  107299 tcttggttcttctctcttcttgttctcccttttctcccaaaagtgattgtacgtgaaaacttttttaaacctagttctcacctatttatatctcctctat 107398  T
Q  106 ctattttatcttatt 120  Q
    ||||| |||||||||    
T  107399 ctattctatcttatt 107413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 110 - 190
Target Start/End: Original strand, 7459 - 7538
Alignment:
Q  110 tttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaacttaattttatttctattttcaa 190  Q
    ||||||||||||||||||  ||||||||| ||||||||| |||||||||||||| || || ||| |||||| |||||||||    
T  7459 tttatcttatttccacttattccactaaactctctaaattctcaaaacagcccctcatctcaatattattt-tattttcaa 7538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 15 - 190
Target Start/End: Complemental strand, 158779 - 158603
Alignment:
Q  15 tcttctctcctcttg--ttctccctttt-tccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatctattt 111  Q
    |||||||| ||||||  ||||||||||| |||| ||||||| ||  |||| ||||  ||||| |  |||||||||||||||||| || ||  | ||| ||    
T  158779 tcttctcttctcttggtttctcccttttctcccaaaaactgttttcacgtaaaaactattctgactctagtttctcctatttatttcctta-acctactt 158681  T
Q  112 tatcttatttccactttatccactaaattct-ctaaatcctcaaaacagccccacaacttaattttatttctattttcaa 190  Q
    |||||||||| |||||  ||||||||| ||| |||||| | |||||||||||||||||||||| |||||| |||||||||    
T  158680 tatcttattttcacttattccactaaactcttctaaattc-caaaacagccccacaacttaatattattt-tattttcaa 158603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 79 - 199
Target Start/End: Original strand, 111513 - 111631
Alignment:
Q  79 tagtttctcctatttatctctttccatctattttatcttatttccactttatccactaaattc-tctaaatcctcaaaacagccccacaacttaatttta 177  Q
    ||||||||||||||||| || | | | ||| |||||||||||||||||| |||||||||| || ||||||| | |||||||||||| ||||| ||| |||    
T  111513 tagtttctcctatttatttcct-caacctactttatcttatttccacttaatccactaaactcttctaaattc-caaaacagcccctcaactcaatatta 111610  T
Q  178 tttctattttcaagacttattc 199  Q
    ||| |||||||||  |||||||    
T  111611 ttt-tattttcaaatcttattc 111631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0396 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0396
Description:

Target: scaffold0396; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 102 - 199
Target Start/End: Original strand, 3553 - 3650
Alignment:
Q  102 ccatctattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaacttaat-tttatttctattttcaagacttattc 199  Q
    |||||||||||||||||||||| ||||  |||| ||| ||||||||| ||||||||| |||| || || ||| ||||||| |||||||||  |||||||    
T  3553 ccatctattttatcttatttcctcttttcccacaaaactctctaaattctcaaaacaacccctcatctcaatatttattt-tattttcaaatcttattc 3650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 67
Target Start/End: Complemental strand, 23075 - 23026
Alignment:
Q  17 ttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaat 67  Q
    |||||||||||||||||||| ||||| |||||||||||||||||| |||||    
T  23075 ttctctcctcttgttctccc-ttttctccaaaactggttgtacgtaaaaat 23026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0848 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0848
Description:

Target: scaffold0848; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 110 - 199
Target Start/End: Complemental strand, 1891 - 1803
Alignment:
Q  110 tttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaacttaattttatttctattttcaagacttattc 199  Q
    |||||||||||| |||||  ||||| ||| ||||||||| |||||||||||||| || || ||| |||||| |||||||||  |||||||    
T  1891 tttatcttattttcacttattccaccaaactctctaaattctcaaaacagcccctcatctcaatattattt-tattttcaaatcttattc 1803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0589 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0589
Description:

Target: scaffold0589; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 180
Target Start/End: Original strand, 4465 - 4638
Alignment:
Q  10 ttggttcttctctcctcttgtt--ctccctttttccccaaaa-ctggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 106  Q
    ||||||||||||| ||||||||  |||| |||||| |||||| || ||| ||||||||||  ||||| |  ||| |||||||||||||| || | | | |    
T  4465 ttggttcttctcttctcttgttttctccatttttctccaaaaacttgttttacgtgaaaactattctgactctactttctcctatttatttcct-caacc 4563  T
Q  107 tattttatcttatttccactttatccactaaattc-tctaaatcctcaaaacag-ccccacaacttaattttattt 180  Q
       ||||||||||||||||||  ||||||||| || ||||||| | |||||||| |||||||||||||| ||||||    
T  4564 ctctttatcttatttccacttattccactaaactcttctaaattc-caaaacagcccccacaacttaatcttattt 4638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0379
Description:

Target: scaffold0379; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 190
Target Start/End: Complemental strand, 3766 - 3687
Alignment:
Q  110 tttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaacttaattttatttctattttcaa 190  Q
    ||||||||||||||||||  ||||||||| ||||||||| |||||||| ||| | || || ||| |||||| |||||||||    
T  3766 tttatcttatttccacttattccactaaactctctaaattctcaaaactgcctctcatctcaatattattt-tattttcaa 3687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 109 - 199
Target Start/End: Original strand, 29569 - 29659
Alignment:
Q  109 ttttatcttatttccactttatccactaaattc-tctaaatcctcaaaacag-ccccacaacttaattttatttctattttcaagacttattc 199  Q
    |||||||||||||||||||  ||||||||| || ||||||| | |||||||| |||||||||||||| |||||| |||||||||  |||||||    
T  29569 ttttatcttatttccacttattccactaaactcttctaaattc-caaaacagcccccacaacttaatcttattt-tattttcaaatcttattc 29659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 39
Target Start/End: Original strand, 81641 - 81673
Alignment:
Q  7 ctcttggttcttctctcctcttgttctcccttt 39  Q
    |||||||||||||||||||||||||||||||||    
T  81641 ctcttggttcttctctcctcttgttctcccttt 81673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 83 - 163
Target Start/End: Original strand, 10936 - 11017
Alignment:
Q  83 ttctcctatttatctct--ttccatctattttatcttatttccactttatccactaaattctctaaatcctcaaaacagcccc 163  Q
    ||||||||||||| |||  | ||||||||||||||||||| ||||||   |||||||| ||||||||| | ||||||||||||    
T  10936 ttctcctatttatatctcctcccatctattttatcttatt-ccacttataccactaaactctctaaattcacaaaacagcccc 11017  T

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Target: scaffold0075 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 110 - 199
Target Start/End: Original strand, 61067 - 61156
Alignment:
Q  110 tttatcttatttccactttatccactaaattc-tctaaatcctcaaaacag-ccccacaacttaattttatttctattttcaagacttattc 199  Q
    ||||||||||||||||||  ||||||||| || ||||||| | |||||||| |||||||||||||| |||||| |||||||||  |||||||    
T  61067 tttatcttatttccacttattccactaaactcttctaaattc-caaaacagtccccacaacttaatcttattt-tattttcaaatcttattc 61156  T

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Target: scaffold0434 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 62
Target Start/End: Complemental strand, 5954 - 5900
Alignment:
Q  8 tcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtg 62  Q
    |||||||||||||||| ||||||| ||||||||  ||||||| || |||||||||    
T  5954 tcttggttcttctctcttcttgttttcccttttctcccaaaagtgattgtacgtg 5900  T

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Target: scaffold0321 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 110 - 199
Target Start/End: Complemental strand, 215 - 126
Alignment:
Q  110 tttatcttatttccactttatccactaaattctctaaatcctcaaaacag-ccccacaacttaattttatttctattttcaagacttattc 199  Q
    ||||||||||||||||||  ||||||||| ||| | |||   |||||||| |||||||||||||| |||||| |||||||||  |||||||    
T  215 tttatcttatttccacttattccactaaactcttttaatttccaaaacagcccccacaacttaatcttattt-tattttcaaatcttattc 126  T

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Target: scaffold0261 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 93 - 163
Target Start/End: Complemental strand, 17373 - 17304
Alignment:
Q  93 tatctctttccatctattttatcttatttccactttatccactaaattctctaaatcctcaaaacagcccc 163  Q
    |||||| | ||||||||||||||||||| ||||||   |||||||| ||||||||| | ||||||||||||    
T  17373 tatctcctcccatctattttatcttatt-ccacttataccactaaaatctctaaattcacaaaacagcccc 17304  T

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Target: scaffold0056 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 110 - 199
Target Start/End: Original strand, 67303 - 67391
Alignment:
Q  110 tttatcttatttccactttatccactaaattc-tctaaatcctcaaaacagccccacaacttaattttatttctattttcaagacttattc 199  Q
    |||||||||||||||||| |||||||||| || ||||||| |  |||||| |||| ||||||||| |||||| |||||||||  |||||||    
T  67303 tttatcttatttccacttaatccactaaactcttctaaattc-aaaaacaacccctcaacttaatattattt-tattttcaaatcttattc 67391  T

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Target: scaffold0074 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 103 - 199
Target Start/End: Original strand, 9233 - 9329
Alignment:
Q  103 catctattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaacttaat-tttatttctattttcaagacttattc 199  Q
    |||||||||||||||||||| |||||  |||| ||| ||||||||| || |||||| |||| || || ||| ||||||| |||||||||  |||||||    
T  9233 catctattttatcttatttctacttttcccacaaaactctctaaattcttaaaacaacccctcatctcaatatttattt-tattttcaaatcttattc 9329  T

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