View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11269_high_22 (Length: 319)
Name: NF11269_high_22
Description: NF11269
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11269_high_22 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 304; Significance: 1e-171; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 304; E-Value: 1e-171
Query Start/End: Original strand, 8 - 319
Target Start/End: Original strand, 41581252 - 41581563
Alignment:
| Q |
8 |
gggtatagcaagcgcatattcgttaaatgttccctctcaatttgatggtcgaatctttcacctactcagttcattcgcctcctttgttaaaactaccata |
107 |
Q |
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| T |
41581252 |
gggtatagcaagcgcatattcgttaaatgttccctctcaatttgatggtcgaatcttccacctactcagttcattcgcctcctttgttaaaactaccata |
41581351 |
T |
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| Q |
108 |
atacccacttttaatcaagcaatcatttgcaaacaaatagaaatcactatggcaattatgtcaagccacttaacacatacataaagtatcataaattcat |
207 |
Q |
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| T |
41581352 |
atacccacttttaatcaagcaatcatttgcaaacaaatagaaatcactatggcaattatgtcaagccacttaacacatacataaagtatcataaattcat |
41581451 |
T |
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| Q |
208 |
aattgttgtttacaaaggaaaatgaatctaattcgcaagcaaaacgaccacgactgatacaaataaaaaatatggtttcgcaatgtgacccttttgcttc |
307 |
Q |
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|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41581452 |
aattgttgtttacaaaggaaaatgaatccaattcgcaagcaaaacgaccacgactgatacaaataaaaaatatggtttcgcaatgtgacccttttgcttc |
41581551 |
T |
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| Q |
308 |
tcatgcttgtgc |
319 |
Q |
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| T |
41581552 |
tcatgcttgtgc |
41581563 |
T |
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