View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11269_high_27 (Length: 252)
Name: NF11269_high_27
Description: NF11269
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11269_high_27 |
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Alignment Details
Target: chr6 (Bit Score: 174; Significance: 1e-93; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 31381483 - 31381246
Alignment:
| Q |
1 |
tttgcaatatctattatcagtcttttctcattggcactgcaacattattgttcaaagcttgttaatataagaaattgaatccacaacattattgtttaat |
100 |
Q |
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| T |
31381483 |
tttgcaatatatattatcaatcttttgtcattggcactgcaacattattgttcaaagcttgttaatataagaaattgaatgcacaacattattgtttaag |
31381384 |
T |
|
| Q |
101 |
gcatcacaattcacaattatgtaatctaaaattatatgcatgctgaatttggaccacgacttccaggtttttaatgtctatttgacgacaagattcaaat |
200 |
Q |
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||||||||||||||||||||| | |||||| |||||||||||||||||||||||||||| || |||||||||||||||||||||| |||| |||||||| |
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| T |
31381383 |
acatcacaattcacaattatgtgaactaaaaatatatgcatgctgaatttggaccacgacgtcaaggtttttaatgtctatttgacaacaatattcaaat |
31381284 |
T |
|
| Q |
201 |
tcgttacaattggagattctcttcattcccgcattcat |
238 |
Q |
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|| ||||||||| ||||||||| ||||||||||||||| |
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| T |
31381283 |
tcattacaattgaagattctctacattcccgcattcat |
31381246 |
T |
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