View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11269_low_20 (Length: 320)

Name: NF11269_low_20
Description: NF11269
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11269_low_20
NF11269_low_20
[»] chr4 (39 HSPs)
chr4 (20-176)||(38032332-38032488)
chr4 (23-176)||(38031221-38031374)
chr4 (24-176)||(7261455-7261607)
chr4 (24-176)||(22621921-22622073)
chr4 (24-176)||(34095571-34095723)
chr4 (24-176)||(8815269-8815421)
chr4 (24-176)||(22623055-22623207)
chr4 (29-176)||(17356420-17356567)
chr4 (31-176)||(10802950-10803095)
chr4 (36-178)||(8814201-8814342)
chr4 (23-176)||(10804107-10804260)
chr4 (24-173)||(17357778-17357927)
chr4 (24-176)||(23757882-23758035)
chr4 (24-176)||(18091634-18091786)
chr4 (236-311)||(38031434-38031509)
chr4 (24-176)||(48501236-48501387)
chr4 (24-171)||(48499418-48499565)
chr4 (30-144)||(35193140-35193254)
chr4 (23-176)||(5433319-5433472)
chr4 (24-154)||(35191871-35192001)
chr4 (24-105)||(56233778-56233859)
chr4 (24-176)||(56234933-56235084)
chr4 (71-176)||(35927028-35927133)
chr4 (37-176)||(36074706-36074844)
chr4 (119-176)||(35925840-35925897)
chr4 (24-81)||(48081597-48081654)
chr4 (119-176)||(48081479-48081536)
chr4 (24-76)||(48080324-48080376)
chr4 (48-82)||(10804261-10804295)
chr4 (48-82)||(34122868-34122902)
chr4 (24-66)||(48081552-48081594)
chr4 (118-176)||(48462915-48462973)
chr4 (49-82)||(10802908-10802941)
chr4 (48-81)||(22621885-22621918)
chr4 (48-81)||(48463051-48463084)
chr4 (48-81)||(56233742-56233775)
chr4 (48-80)||(17357931-17357963)
chr4 (48-80)||(35191835-35191867)
chr4 (140-176)||(56233878-56233914)
[»] chr6 (21 HSPs)
chr6 (23-176)||(32348949-32349102)
chr6 (23-176)||(11801254-11801407)
chr6 (20-176)||(32347858-32348014)
chr6 (24-176)||(34996673-34996825)
chr6 (24-176)||(32713795-32713947)
chr6 (24-176)||(3000705-3000857)
chr6 (24-176)||(34995406-34995557)
chr6 (23-176)||(32712408-32712561)
chr6 (24-176)||(18572939-18573090)
chr6 (23-176)||(19383067-19383219)
chr6 (236-311)||(32348820-32348895)
chr6 (73-176)||(27719839-27719941)
chr6 (71-176)||(21094506-21094611)
chr6 (24-105)||(29479177-29479258)
chr6 (119-176)||(21095291-21095348)
chr6 (24-82)||(18574299-18574357)
chr6 (118-173)||(13561421-13561476)
chr6 (48-82)||(3000859-3000893)
chr6 (121-171)||(7629723-7629773)
chr6 (131-176)||(18574225-18574270)
chr6 (48-81)||(29477777-29477810)
[»] chr3 (73 HSPs)
chr3 (23-176)||(28777599-28777752)
chr3 (23-176)||(28776501-28776654)
chr3 (24-171)||(31938224-31938371)
chr3 (24-176)||(31937089-31937241)
chr3 (20-176)||(37609371-37609527)
chr3 (24-176)||(43393965-43394118)
chr3 (24-174)||(17116256-17116405)
chr3 (24-169)||(17742211-17742357)
chr3 (24-169)||(19043531-19043677)
chr3 (24-169)||(5691014-5691158)
chr3 (36-176)||(5689785-5689925)
chr3 (36-176)||(21729100-21729240)
chr3 (24-176)||(35759143-35759295)
chr3 (24-176)||(46902385-46902537)
chr3 (24-176)||(46903536-46903688)
chr3 (24-176)||(47431099-47431251)
chr3 (29-176)||(17740889-17741036)
chr3 (29-176)||(19042209-19042356)
chr3 (25-171)||(54354308-54354454)
chr3 (20-176)||(11346862-11347018)
chr3 (24-168)||(54353077-54353221)
chr3 (53-176)||(37610675-37610798)
chr3 (29-176)||(52521986-52522132)
chr3 (25-176)||(53765878-53766029)
chr3 (24-174)||(53180718-53180868)
chr3 (24-172)||(2233221-2233369)
chr3 (24-176)||(21727964-21728116)
chr3 (48-176)||(35758082-35758210)
chr3 (24-176)||(55209836-55209987)
chr3 (24-178)||(50881026-50881173)
chr3 (24-176)||(2232656-2232808)
chr3 (24-171)||(52525276-52525423)
chr3 (24-176)||(23073286-23073438)
chr3 (236-311)||(28777464-28777539)
chr3 (24-176)||(47917525-47917676)
chr3 (60-171)||(10978095-10978206)
chr3 (24-105)||(53764482-53764563)
chr3 (24-176)||(47429681-47429828)
chr3 (24-101)||(23091245-23091322)
chr3 (65-171)||(50879782-50879888)
chr3 (24-176)||(10979087-10979239)
chr3 (24-176)||(11348384-11348535)
chr3 (24-103)||(53178755-53178834)
chr3 (19-178)||(15290400-15290558)
chr3 (51-176)||(55210820-55210945)
chr3 (31-100)||(33113306-33113376)
chr3 (24-102)||(46986077-46986154)
chr3 (236-305)||(47429942-47430011)
chr3 (24-102)||(17117387-17117463)
chr3 (24-82)||(43392680-43392738)
chr3 (24-82)||(23072114-23072171)
chr3 (113-171)||(53764893-53764951)
chr3 (131-178)||(43392767-43392814)
chr3 (48-82)||(10979241-10979275)
chr3 (48-82)||(31937053-31937087)
chr3 (118-176)||(33111757-33111815)
chr3 (48-82)||(34014526-34014560)
chr3 (48-82)||(46902349-46902383)
chr3 (48-82)||(46903690-46903724)
chr3 (48-81)||(11348538-11348571)
chr3 (48-81)||(17117466-17117499)
chr3 (48-81)||(31938374-31938407)
chr3 (48-81)||(43392644-43392677)
chr3 (48-81)||(43394121-43394154)
chr3 (48-81)||(47429645-47429678)
chr3 (49-82)||(50879513-50879546)
chr3 (48-81)||(52525426-52525459)
chr3 (49-81)||(2232621-2232653)
chr3 (49-81)||(17116221-17116253)
chr3 (49-81)||(17742360-17742392)
chr3 (49-81)||(19043680-19043712)
chr3 (48-80)||(53766034-53766066)
chr3 (48-80)||(55209800-55209832)
[»] chr1 (32 HSPs)
chr1 (23-176)||(7111387-7111540)
chr1 (23-176)||(7110279-7110432)
chr1 (24-176)||(51693201-51693353)
chr1 (24-175)||(5488780-5488931)
chr1 (24-171)||(50484913-50485060)
chr1 (24-176)||(17244229-17244381)
chr1 (24-168)||(18819316-18819460)
chr1 (24-176)||(51468393-51468545)
chr1 (24-171)||(5488555-5488702)
chr1 (51-176)||(52761508-52761633)
chr1 (20-176)||(38235062-38235217)
chr1 (24-176)||(52086681-52086831)
chr1 (24-176)||(45229515-45229667)
chr1 (24-168)||(40187657-40187800)
chr1 (24-176)||(52759417-52759569)
chr1 (24-176)||(51468813-51468965)
chr1 (38-169)||(1823215-1823345)
chr1 (31-175)||(1821969-1822114)
chr1 (40-176)||(45228345-45228481)
chr1 (28-176)||(52087686-52087834)
chr1 (236-311)||(7110492-7110567)
chr1 (116-176)||(21203157-21203217)
chr1 (24-176)||(50483564-50483716)
chr1 (24-102)||(17245651-17245728)
chr1 (247-308)||(36809016-36809077)
chr1 (24-101)||(47533011-47533088)
chr1 (24-176)||(47533766-47533918)
chr1 (23-65)||(25181554-25181596)
chr1 (48-82)||(25181519-25181553)
chr1 (48-82)||(51693165-51693199)
chr1 (48-82)||(52086645-52086679)
chr1 (48-81)||(18820823-18820856)
[»] chr5 (25 HSPs)
chr5 (23-176)||(19228891-19229044)
chr5 (23-176)||(19229985-19230138)
chr5 (24-168)||(9083216-9083360)
chr5 (24-176)||(12372368-12372520)
chr5 (24-172)||(9082033-9082181)
chr5 (24-176)||(13278143-13278295)
chr5 (24-171)||(39350562-39350709)
chr5 (24-173)||(18654350-18654500)
chr5 (24-174)||(18655566-18655716)
chr5 (24-176)||(6803537-6803688)
chr5 (236-311)||(19229104-19229179)
chr5 (24-176)||(39164110-39164260)
chr5 (24-176)||(39349534-39349686)
chr5 (24-176)||(12373629-12373785)
chr5 (23-103)||(13276872-13276952)
chr5 (52-173)||(4031903-4032024)
chr5 (53-176)||(4032937-4033060)
chr5 (24-71)||(6802028-6802075)
chr5 (24-78)||(8447131-8447185)
chr5 (236-301)||(13277074-13277139)
chr5 (129-173)||(39051591-39051635)
chr5 (63-105)||(6802358-6802400)
chr5 (48-82)||(8447095-8447129)
chr5 (48-82)||(13276837-13276871)
chr5 (116-173)||(38603668-38603725)
[»] chr7 (53 HSPs)
chr7 (19-173)||(13750551-13750705)
chr7 (23-176)||(9391572-9391725)
chr7 (24-175)||(43113728-43113879)
chr7 (23-176)||(9392727-9392880)
chr7 (23-176)||(18788472-18788625)
chr7 (24-176)||(19217681-19217833)
chr7 (24-176)||(44420435-44420586)
chr7 (24-178)||(29186718-29186872)
chr7 (23-175)||(44746779-44746931)
chr7 (24-176)||(45399922-45400074)
chr7 (24-176)||(27072566-27072718)
chr7 (24-176)||(27205595-27205747)
chr7 (24-176)||(29187942-29188094)
chr7 (24-176)||(44417511-44417663)
chr7 (24-176)||(48793428-48793580)
chr7 (48-176)||(44748475-44748603)
chr7 (24-171)||(3537480-3537627)
chr7 (37-176)||(43961000-43961139)
chr7 (24-175)||(43962482-43962633)
chr7 (24-176)||(7011687-7011840)
chr7 (24-176)||(7027045-7027198)
chr7 (24-176)||(18787202-18787354)
chr7 (24-168)||(44230481-44230625)
chr7 (23-176)||(13597197-13597349)
chr7 (24-176)||(32519661-32519813)
chr7 (24-176)||(48792497-48792649)
chr7 (48-173)||(26005429-26005554)
chr7 (24-176)||(37237140-37237289)
chr7 (26-176)||(12630619-12630770)
chr7 (24-174)||(32518475-32518616)
chr7 (51-176)||(43114999-43115124)
chr7 (53-176)||(13599169-13599293)
chr7 (36-98)||(37235879-37235941)
chr7 (24-176)||(3538485-3538627)
chr7 (48-176)||(13749081-13749208)
chr7 (118-176)||(42611564-42611622)
chr7 (130-176)||(44231773-44231819)
chr7 (24-81)||(12630557-12630614)
chr7 (125-176)||(37235939-37235990)
chr7 (48-82)||(3537444-3537478)
chr7 (48-82)||(7057395-7057429)
chr7 (48-82)||(9391537-9391571)
chr7 (48-82)||(19217645-19217679)
chr7 (48-82)||(29186682-29186716)
chr7 (48-82)||(44231908-44231942)
chr7 (48-82)||(48792461-48792495)
chr7 (48-81)||(3538630-3538663)
chr7 (139-176)||(9357708-9357745)
chr7 (48-81)||(43113692-43113725)
chr7 (48-81)||(43960963-43960996)
chr7 (48-81)||(43962636-43962669)
chr7 (48-81)||(45688885-45688918)
chr7 (48-80)||(44417475-44417507)
[»] chr8 (24 HSPs)
chr8 (24-178)||(9244119-9244273)
chr8 (20-176)||(34642715-34642870)
chr8 (24-176)||(9245343-9245495)
chr8 (24-176)||(26364795-26364947)
chr8 (24-176)||(41636885-41637037)
chr8 (24-176)||(522009-522161)
chr8 (24-176)||(20309963-20310116)
chr8 (24-176)||(21096596-21096749)
chr8 (24-176)||(20308977-20309129)
chr8 (24-176)||(21095610-21095762)
chr8 (24-176)||(30644617-30644768)
chr8 (40-176)||(30640868-30641003)
chr8 (24-176)||(43584462-43584614)
chr8 (24-171)||(41638070-41638216)
chr8 (24-176)||(26366106-26366258)
chr8 (24-178)||(43585855-43586008)
chr8 (24-175)||(34643878-34644024)
chr8 (24-72)||(31203020-31203068)
chr8 (131-176)||(22012298-22012343)
chr8 (131-176)||(22013171-22013216)
chr8 (48-82)||(9244083-9244117)
chr8 (48-81)||(26364759-26364792)
chr8 (131-176)||(43133980-43134025)
chr8 (48-80)||(522165-522197)
[»] scaffold0141 (4 HSPs)
scaffold0141 (24-171)||(31087-31234)
scaffold0141 (24-171)||(35202-35349)
scaffold0141 (48-82)||(35351-35385)
scaffold0141 (48-81)||(31051-31084)
[»] scaffold0049 (4 HSPs)
scaffold0049 (24-171)||(79463-79610)
scaffold0049 (24-171)||(83578-83725)
scaffold0049 (48-82)||(79427-79461)
scaffold0049 (48-81)||(83728-83761)
[»] scaffold0878 (3 HSPs)
scaffold0878 (24-176)||(2938-3091)
scaffold0878 (48-176)||(1847-1974)
scaffold0878 (48-82)||(3093-3127)
[»] chr2 (13 HSPs)
chr2 (24-176)||(16602779-16602931)
chr2 (24-176)||(27892248-27892400)
chr2 (24-176)||(38243867-38244019)
chr2 (24-168)||(23833022-23833165)
chr2 (28-176)||(27891164-27891312)
chr2 (24-147)||(26388272-26388395)
chr2 (31-176)||(38242944-38243086)
chr2 (24-82)||(16604195-16604253)
chr2 (24-78)||(43814575-43814629)
chr2 (48-82)||(16604255-16604289)
chr2 (24-58)||(23833900-23833934)
chr2 (48-81)||(27891124-27891157)
chr2 (48-81)||(27892403-27892436)
[»] scaffold0018 (2 HSPs)
scaffold0018 (24-176)||(25256-25409)
scaffold0018 (49-81)||(25412-25444)
[»] scaffold1425 (3 HSPs)
scaffold1425 (24-171)||(188-335)
scaffold1425 (24-176)||(1513-1665)
scaffold1425 (48-80)||(1669-1701)
[»] scaffold0349 (1 HSPs)
scaffold0349 (73-176)||(9261-9363)
[»] scaffold0026 (3 HSPs)
scaffold0026 (124-176)||(104405-104457)
scaffold0026 (24-76)||(104355-104407)
scaffold0026 (48-82)||(104319-104353)


Alignment Details
Target: chr4 (Bit Score: 124; Significance: 9e-64; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 20 - 176
Target Start/End: Complemental strand, 38032488 - 38032332
Alignment:
Q  20 tcatataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccg 119  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       || ||||    
T  38032488 tcatataagtcttaactttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctaaaaaaagagaccg 38032389  T
Q  120 ttggattacgaaggtctatcagattttatagtgtatcatcaacacctaatttattta 176  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  38032388 ttggattacggaggtctatcagattttatagtgtatcatcaacacctaatttattta 38032332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 23 - 176
Target Start/End: Original strand, 38031221 - 38031374
Alignment:
Q  23 tataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttg 122  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |        | |||||||    
T  38031221 tataagtcttaactttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccataaaaaaaaagaccgttg 38031320  T
Q  123 gattacgaaggtctatcagattttatagtgtatcatcaacacctaatttattta 176  Q
     |||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  38031321 aattacggaggtctatcagattttatagtgtatcatcaacacctaatttattta 38031374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 24 - 176
Target Start/End: Complemental strand, 7261607 - 7261455
Alignment:
Q  24 ataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttgg 123  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||        | ||| ||||    
T  7261607 ataagtcttaactttctcaaacacgtcccttaacttatttcttttattcaatttggtccaattttgataattttaatcccctaaaaaaatagaccattgg 7261508  T
Q  124 attacgaaggtctatcagattttatagtgtatcatcaacacctaatttattta 176  Q
    ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  7261507 attacgaaggtctataagattttatagtgtatcaccaacacctaatttattta 7261455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 24 - 176
Target Start/End: Original strand, 22621921 - 22622073
Alignment:
Q  24 ataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttgg 123  Q
    ||||||||||| ||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||       || ||||||||    
T  22621921 ataagtcttaactttctcaaacacgtccctttacttatttcttttattcaatttggtccaattttgataattttaatcccctaaaaaaagagaccgttgg 22622020  T
Q  124 attacgaaggtctatcagattttatagtgtatcatcaacacctaatttattta 176  Q
    |||||| ||||||||||||||||||||||||||| | ||||| ||||||||||    
T  22622021 attacggaggtctatcagattttatagtgtatcaccgacaccgaatttattta 22622073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 24 - 176
Target Start/End: Complemental strand, 34095723 - 34095571
Alignment:
Q  24 ataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttgg 123  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||       || |||||||     
T  34095723 ataagtcttaactttctcaaacacgtcccttaacttatttcttttgttcaatttggtccaattttgataattttaatcccctaaaaaaggagaccgttga 34095624  T
Q  124 attacgaaggtctatcagattttatagtgtatcatcaacacctaatttattta 176  Q
    |||||| ||||||||||||||||||||||||||| | ||||||||||||||||    
T  34095623 attacggaggtctatcagattttatagtgtatcacccacacctaatttattta 34095571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 24 - 176
Target Start/End: Complemental strand, 8815421 - 8815269
Alignment:
Q  24 ataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttgg 123  Q
    ||||||||||| ||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||||||||||||||| ||        ||||||||||    
T  8815421 ataagtcttaactttctcaaacacgtcccttaacttatttcttctattcaaattggtccaattttgataattttaatcctctaaaaaaaaaaaccgttgg 8815322  T
Q  124 attacgaaggtctatcagattttatagtgtatcatcaacacctaatttattta 176  Q
    |||||| ||||||||||||||||||||||||||| ||||||| ||||||||||    
T  8815321 attacggaggtctatcagattttatagtgtatcaccaacaccaaatttattta 8815269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 24 - 176
Target Start/End: Complemental strand, 22623207 - 22623055
Alignment:
Q  24 ataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttgg 123  Q
    ||||||||||| |||||||| |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||       || ||||||||    
T  22623207 ataagtcttaactttctcaagcacgtccctttacttatttcttttattcaatttggtccaattttgataattttaatcccctacaaaaagagaccgttgg 22623108  T
Q  124 attacgaaggtctatcagattttatagtgtatcatcaacacctaatttattta 176  Q
    |||||| ||||||||||||||||||| ||||||| ||||| ||||||||||||    
T  22623107 attacggaggtctatcagattttataatgtatcaccaacatctaatttattta 22623055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 29 - 176
Target Start/End: Original strand, 17356420 - 17356567
Alignment:
Q  29 tcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttggattac 128  Q
    |||||| ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||       || |||||||||||||    
T  17356420 tcttaactttctcaaacacgtcccttaacttatttcttttattcaatttgttccaattttgataattttaatcccctaaaaaaagagaccgttggattac 17356519  T
Q  129 gaaggtctatcagattttatagtgtatcatcaacacctaatttattta 176  Q
    | ||||||||||||||||||||||||||| ||||||||| || |||||    
T  17356520 ggaggtctatcagattttatagtgtatcaccaacacctagttcattta 17356567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 31 - 176
Target Start/End: Original strand, 10802950 - 10803095
Alignment:
Q  31 ttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttggattacga 130  Q
    |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||       || ||||||||||||||     
T  10802950 ttaactttctcaaacacgtcccttaacttatttcttttattcaatttggtccaattttgataattttaataccctaaaaaaagagaccgttggattacgg 10803049  T
Q  131 aggtctatcagattttatagtgtatcatcaacacctaatttattta 176  Q
    |||| |||||||||||||| ||||||| ||||||| ||||||||||    
T  10803050 aggtttatcagattttatattgtatcaccaacaccgaatttattta 10803095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 36 - 178
Target Start/End: Original strand, 8814201 - 8814342
Alignment:
Q  36 tttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttggattacgaaggtc 135  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||| |||||||||||||||||| ||||        | || ||||||||||| |||||    
T  8814201 tttctcaaacatgtcccttaacttatttcttttattcaatttggtcgaattttgataattttaataccctaaaaaat-agactgttggattacggaggtc 8814299  T
Q  136 tatcagattttatagtgtatcatcaacacctaatttatttatt 178  Q
    ||||||||||||||||||| || ||||||||||||||||||||    
T  8814300 tatcagattttatagtgtaacaccaacacctaatttatttatt 8814342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 23 - 176
Target Start/End: Complemental strand, 10804260 - 10804107
Alignment:
Q  23 tataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttg 122  Q
    ||||||| |||| ||||| ||| | || |||||||| ||||||||||||||||||||| ||||||||||||||||||||| ||        | |||||||    
T  10804260 tataagttttaactttcttaaataagttccttaacttatttcttttattcaatttggttcaattttgataattttaatccactaaaaaaaaagaccgttg 10804161  T
Q  123 gattacgaaggtctatcagattttatagtgtatcatcaacacctaatttattta 176  Q
    ||||||| ||||||||||||||||| |||||||||||||| |||||||||||||    
T  10804160 gattacggaggtctatcagattttacagtgtatcatcaacgcctaatttattta 10804107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 24 - 173
Target Start/End: Complemental strand, 17357927 - 17357778
Alignment:
Q  24 ataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttgg 123  Q
    ||||||||||| ||||||||||||||||||||||| |||||||||||||||| || |||||||||||||||||||||| |||       || |||||||     
T  17357927 ataagtcttaactttctcaaacacgtcccttaacttatttcttttattcaatatgatccaattttgataattttaatctcctgaaaaaagagaccgttga 17357828  T
Q  124 attacgaaggtctatcagattttatagtgtatcatcaacacctaatttat 173  Q
    |||||| ||||||| ||||||||||| ||||||| ||| || ||||||||    
T  17357827 attacggaggtctaccagattttataatgtatcagcaatacttaatttat 17357778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 24 - 176
Target Start/End: Complemental strand, 23758035 - 23757882
Alignment:
Q  24 ataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaa-tttggtccaattttgataattttaatcccctnnnnnnngaaaccgttg 122  Q
    |||||| |||| ||||||||||||||||||||||| |||||||||||| || |||| ||||||||||||||||||||||| |        || |||||||    
T  23758035 ataagttttaactttctcaaacacgtcccttaacttatttcttttattaaattttgatccaattttgataattttaatcctccaaaaaaagagaccgttg 23757936  T
Q  123 gattacgaaggtctatcagattttatagtgtatcatcaacacctaatttattta 176  Q
     |||||| |||||||||||||||||| |||||||| ||||||||||||||||||    
T  23757935 aattacggaggtctatcagattttatggtgtatcaccaacacctaatttattta 23757882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 24 - 176
Target Start/End: Original strand, 18091634 - 18091786
Alignment:
Q  24 ataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttgg 123  Q
    ||||||||||| ||||||||| |||||| |||||| || | ||||||||||||| ||||||||||||||||||||||| | |       || |||||||     
T  18091634 ataagtcttaactttctcaaaaacgtccattaacttatctattttattcaatttagtccaattttgataattttaatctcttaaaaaatgagaccgttga 18091733  T
Q  124 attacgaaggtctatcagattttatagtgtatcatcaacacctaatttattta 176  Q
    |||||  ||||||||||||||||||||||||||| ||||||||||||||||||    
T  18091734 attacagaggtctatcagattttatagtgtatcaccaacacctaatttattta 18091786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 236 - 311
Target Start/End: Original strand, 38031434 - 38031509
Alignment:
Q  236 aaaaaaccaagattcaattccaaatcacactcttccaattccattctctagattcatcatcaattctcatctctgc 311  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38031434 aaaaaaccaagattcaattccaaatcacactcttccaattccattctctagattcatcatcaattctcatctctgc 38031509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 24 - 176
Target Start/End: Complemental strand, 48501387 - 48501236
Alignment:
Q  24 ataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttgg 123  Q
    |||| |||||| ||||||||||| |||| |||||| |||||||||||||||||||||| |||||| ||| ||||||||||||       || |||||| |    
T  48501387 ataattcttaactttctcaaacatgtcctttaacttatttcttttattcaatttggtctaattttaata-ttttaatcccctaaaaaaagagaccgttag 48501289  T
Q  124 attacgaaggtctatcagattttatagtgtatcatcaacacctaatttattta 176  Q
    |||||| |||||| ||||||||||| |||||||||||||||||||||||||||    
T  48501288 attacggaggtctgtcagattttattgtgtatcatcaacacctaatttattta 48501236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 24 - 171
Target Start/End: Original strand, 48499418 - 48499565
Alignment:
Q  24 ataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttgg 123  Q
    |||| |||||| ||| ||||||| ||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||       || | ||||||    
T  48499418 ataattcttaactttttcaaacatgtcccttaacttatttattttattcaatttggtccaattttgataattttaatcccctaaaaaaagagatcgttgg 48499517  T
Q  124 attacgaaggtctatcagattttatagtgtatcatcaacacctaattt 171  Q
    |||||  |||||||||||||||||  |||||||| ||||| |||||||    
T  48499518 attacagaggtctatcagattttacggtgtatcaccaacatctaattt 48499565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 30 - 144
Target Start/End: Complemental strand, 35193254 - 35193140
Alignment:
Q  30 cttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttggattacg 129  Q
    ||||| |||||||||||||||| |||||| |||||||||||||||||||||||| |||||||||||||||||||||       || ||||||||||||||    
T  35193254 cttaactttctcaaacacgtcctttaacttatttcttttattcaatttggtccatttttgataattttaatcccctagaaaaagagaccgttggattacg 35193155  T
Q  130 aaggtctatcagatt 144  Q
     ||||||||||||||    
T  35193154 gaggtctatcagatt 35193140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 23 - 176
Target Start/End: Complemental strand, 5433472 - 5433319
Alignment:
Q  23 tataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttg 122  Q
    ||||||| |||| ||||||||||| || |||||||| |||| |||||||||||||  ||||||||||||||||||||| ||||       || || ||||    
T  5433472 tataagttttaactttctcaaacatgtgccttaacttatttattttattcaatttactccaattttgataattttaataccctaaaaattgagactgttg 5433373  T
Q  123 gattacgaaggtctatcagattttatagtgtatcatcaacacctaatttattta 176  Q
     |||||| ||||||||||||||||||| |||||||  |||||||||||||||||    
T  5433372 tattacggaggtctatcagattttataatgtatcacaaacacctaatttattta 5433319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 24 - 154
Target Start/End: Original strand, 35191871 - 35192001
Alignment:
Q  24 ataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttgg 123  Q
    ||||||||||| |||||||||||||| | |||||| |||||||||||||||||| || ||||||||||||||||||||||||       || | ||||||    
T  35191871 ataagtcttaactttctcaaacacgttcattaacttatttcttttattcaatttagttcaattttgataattttaatcccctaaaaaaagagaacgttgg 35191970  T
Q  124 attacgaaggtctatcagattttatagtgta 154  Q
    |||||| | |||||||| |||||||||||||    
T  35191971 attacggaagtctatcaaattttatagtgta 35192001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 24 - 105
Target Start/End: Original strand, 56233778 - 56233859
Alignment:
Q  24 ataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccct 105  Q
    |||||||| || ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  56233778 ataagtctcaactttctcaaacatgtcccttaacttatttcttttattcaatttggtccaattttgataattttaatcccct 56233859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 24 - 176
Target Start/End: Complemental strand, 56235084 - 56234933
Alignment:
Q  24 ataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttgg 123  Q
    ||||||||||| ||| ||||||||  ||||||||| ||||||||||||||||| |||| |||||||||| ||||||||| ||        | |||  ||     
T  56235084 ataagtcttaactttatcaaacacaccccttaacttatttcttttattcaattcggtctaattttgatacttttaatcctctaaaaaac-agaccaatga 56234986  T
Q  124 attacgaaggtctatcagattttatagtgtatcatcaacacctaatttattta 176  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||||||||||    
T  56234985 attacgaaggtctatcagattttataatgtatcaccaacacctaatttattta 56234933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 71 - 176
Target Start/End: Complemental strand, 35927133 - 35927028
Alignment:
Q  71 tcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttggattacgaaggtctatcagattttatagtgtatcatcaacacctaatt 170  Q
    |||||||| |||||||||||||||||||||| |||        | | |||||||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  35927133 tcaatttgatccaattttgataattttaatctcctaaaaaaaaagatcgttggattacgaaggtctaccagattttatagtgtatcaccaacacctaatt 35927034  T
Q  171 tattta 176  Q
    ||||||    
T  35927033 tattta 35927028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 37 - 176
Target Start/End: Complemental strand, 36074844 - 36074706
Alignment:
Q  37 ttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttg-ataattttaatcccctnnnnnnngaaaccgttggattacgaaggtc 135  Q
    ||||||| ||||| |||||||| |||| ||||||||||||||||| ||||||  ||| |||||||| | |       ||   ||||||||||||||||||    
T  36074844 ttctcaagcacgttccttaacttattttttttattcaatttggtctaattttttatatttttaatctcataaaaaaagat--cgttggattacgaaggtc 36074747  T
Q  136 tatcagattttatagtgtatcatcaacacctaatttattta 176  Q
    ||||| |||||||||||||||| ||||||||||||||||||    
T  36074746 tatcatattttatagtgtatcaccaacacctaatttattta 36074706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 119 - 176
Target Start/End: Original strand, 35925840 - 35925897
Alignment:
Q  119 gttggattacgaaggtctatcagattttatagtgtatcatcaacacctaatttattta 176  Q
    ||||||||||| || ||||||||||||||||||||||| |||||||||||||||||||    
T  35925840 gttggattacggagatctatcagattttatagtgtatcgtcaacacctaatttattta 35925897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 24 - 81
Target Start/End: Complemental strand, 48081654 - 48081597
Alignment:
Q  24 ataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtc 81  Q
    ||||||||||| ||| ||||| | ||||||||||| ||||||||||||||||||||||    
T  48081654 ataagtcttaactttttcaaatatgtcccttaacttatttcttttattcaatttggtc 48081597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 119 - 176
Target Start/End: Complemental strand, 48081536 - 48081479
Alignment:
Q  119 gttggattacgaaggtctatcagattttatagtgtatcatcaacacctaatttattta 176  Q
    |||||||| || |||||| ||||| |||||| ||||||| ||||||||||||||||||    
T  48081536 gttggattgcggaggtctttcagagtttataatgtatcaccaacacctaatttattta 48081479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 76
Target Start/End: Original strand, 48080324 - 48080376
Alignment:
Q  24 ataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatt 76  Q
    ||||||||||| ||||||||||  |||| |||||| |||||||||||||||||    
T  48080324 ataagtcttaactttctcaaacttgtcctttaacttatttcttttattcaatt 48080376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 82
Target Start/End: Complemental strand, 10804295 - 10804261
Alignment:
Q  48 gtcccttaactgatttcttttattcaatttggtcc 82  Q
    ||||||||||| |||||||||||||||||||||||    
T  10804295 gtcccttaacttatttcttttattcaatttggtcc 10804261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 82
Target Start/End: Complemental strand, 34122902 - 34122868
Alignment:
Q  48 gtcccttaactgatttcttttattcaatttggtcc 82  Q
    ||||||||||| |||||||||||||||||||||||    
T  34122902 gtcccttaacttatttcttttattcaatttggtcc 34122868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 24 - 66
Target Start/End: Complemental strand, 48081594 - 48081552
Alignment:
Q  24 ataagtcttaattttctcaaacacgtcccttaactgatttctt 66  Q
    ||||||||||| ||||||||||||||||||||| | |||||||    
T  48081594 ataagtcttaactttctcaaacacgtcccttaagttatttctt 48081552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 118 - 176
Target Start/End: Complemental strand, 48462973 - 48462915
Alignment:
Q  118 cgttggattacgaaggtctatcagattttatagtgtatcatcaacacctaatttattta 176  Q
    |||||||||| | || |||||||||| ||||| |||||||||||||| | |||||||||    
T  48462973 cgttggattagggagatctatcagatcttatactgtatcatcaacacatgatttattta 48462915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 82
Target Start/End: Original strand, 10802908 - 10802941
Alignment:
Q  49 tcccttaactgatttcttttattcaatttggtcc 82  Q
    |||||||||| |||||||||||||||||||||||    
T  10802908 tcccttaacttatttcttttattcaatttggtcc 10802941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 81
Target Start/End: Original strand, 22621885 - 22621918
Alignment:
Q  48 gtcccttaactgatttcttttattcaatttggtc 81  Q
    ||||||||||| ||||||||||||||||||||||    
T  22621885 gtcccttaacttatttcttttattcaatttggtc 22621918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 81
Target Start/End: Complemental strand, 48463084 - 48463051
Alignment:
Q  48 gtcccttaactgatttcttttattcaatttggtc 81  Q
    ||||||||||| ||||||||||||||||||||||    
T  48463084 gtcccttaacttatttcttttattcaatttggtc 48463051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 81
Target Start/End: Original strand, 56233742 - 56233775
Alignment:
Q  48 gtcccttaactgatttcttttattcaatttggtc 81  Q
    ||||||||||| ||||||||||||||||||||||    
T  56233742 gtcccttaacttatttcttttattcaatttggtc 56233775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 48 - 80
Target Start/End: Complemental strand, 17357963 - 17357931
Alignment:
Q  48 gtcccttaactgatttcttttattcaatttggt 80  Q
    ||||||||||| |||||||||||||||||||||    
T  17357963 gtcccttaacttatttcttttattcaatttggt 17357931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 48 - 80
Target Start/End: Original strand, 35191835 - 35191867
Alignment:
Q  48 gtcccttaactgatttcttttattcaatttggt 80  Q
    ||||||||||| |||||||||||||||||||||    
T  35191835 gtcccttaacttatttcttttattcaatttggt 35191867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 176
Target Start/End: Original strand, 56233878 - 56233914
Alignment:
Q  140 agattttatagtgtatcatcaacacctaatttattta 176  Q
    |||||||||||||||||  ||||||||||||||||||    
T  56233878 agattttatagtgtatcgccaacacctaatttattta 56233914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 121; Significance: 5e-62; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 23 - 176
Target Start/End: Complemental strand, 32349102 - 32348949
Alignment:
Q  23 tataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttg 122  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       || |||||||    
T  32349102 tataagtcttaactttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctaaaaaaagagaccgttg 32349003  T
Q  123 gattacgaaggtctatcagattttatagtgtatcatcaacacctaatttattta 176  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  32349002 gattacggaggtctatcagattttatagtgtatcatcaacacctaatttattta 32348949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 23 - 176
Target Start/End: Complemental strand, 11801407 - 11801254
Alignment:
Q  23 tataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttg 122  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       || |||||||    
T  11801407 tataagtcttaactttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctcaaaaaagagaccgttg 11801308  T
Q  123 gattacgaaggtctatcagattttatagtgtatcatcaacacctaatttattta 176  Q
    ||||||| |||||||||| ||||||||||||||||| |||||||||||||||||    
T  11801307 gattacggaggtctatcaaattttatagtgtatcattaacacctaatttattta 11801254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 20 - 176
Target Start/End: Original strand, 32347858 - 32348014
Alignment:
Q  20 tcatataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccg 119  Q
    ||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||       || | ||    
T  32347858 tcatataagtcttaactttctcaaacacgtcccttaagtgatttcttttattcaatttggtccaattttgataattttaatcccctaaaaaaagagaacg 32347957  T
Q  120 ttggattacgaaggtctatcagattttatagtgtatcatcaacacctaatttattta 176  Q
    ||||||||||  |||||||||||||||||||||||||||||||||||||||||||||    
T  32347958 ttggattacgggggtctatcagattttatagtgtatcatcaacacctaatttattta 32348014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 24 - 176
Target Start/End: Complemental strand, 34996825 - 34996673
Alignment:
Q  24 ataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttgg 123  Q
    ||||||||||| ||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||        | ||||||||    
T  34996825 ataagtcttaactttctcaaatacgtcccttaacttatttcttttattcaatttggtccaattttgataattttaatctcctaaaaaaacagaccgttgg 34996726  T
Q  124 attacgaaggtctatcagattttatagtgtatcatcaacacctaatttattta 176  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  34996725 attacgaaggtctatcagattttatagtgtatcaccaacacctaatttattta 34996673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 24 - 176
Target Start/End: Complemental strand, 32713947 - 32713795
Alignment:
Q  24 ataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttgg 123  Q
    |||| |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||       |  ||||||||    
T  32713947 ataaatcttaactttctcaaacacgtcccttaacttatttcttttattcaatttggtccaattttgataattttaatcccctaaaaaaagtgaccgttgg 32713848  T
Q  124 attacgaaggtctatcagattttatagtgtatcatcaacacctaatttattta 176  Q
    |||||| |||||||| |||||||| ||||||||| ||||||||||||||||||    
T  32713847 attacggaggtctataagattttacagtgtatcaccaacacctaatttattta 32713795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 24 - 176
Target Start/End: Complemental strand, 3000857 - 3000705
Alignment:
Q  24 ataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttgg 123  Q
    |||| |||||| |||||||||||| |||||||||| |||||||||||||||||| |||||||||||||||||||||||||||        | | ||||||    
T  3000857 ataaatcttaactttctcaaacacctcccttaacttatttcttttattcaatttagtccaattttgataattttaatcccctaaaaacacagatcgttgg 3000758  T
Q  124 attacgaaggtctatcagattttatagtgtatcatcaacacctaatttattta 176  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||    
T  3000757 attacgaaggtctatcagattttatagtgtatcactaacacctaatttattta 3000705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 24 - 176
Target Start/End: Original strand, 34995406 - 34995557
Alignment:
Q  24 ataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttgg 123  Q
    ||||||||||| |||||||||||||||  |||||| ||||||||||||||||||||||||||||| ||||||||||||||||        | |||||| |    
T  34995406 ataagtcttaactttctcaaacacgtct-ttaacttatttcttttattcaatttggtccaattttaataattttaatcccctaaaaaaacagaccgttag 34995504  T
Q  124 attacgaaggtctatcagattttatagtgtatcatcaacacctaatttattta 176  Q
    |||||||||||||||||||||||||||||||||| ||||| ||||||||||||    
T  34995505 attacgaaggtctatcagattttatagtgtatcaccaacatctaatttattta 34995557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 23 - 176
Target Start/End: Original strand, 32712408 - 32712561
Alignment:
Q  23 tataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttg 122  Q
    ||||| |||||  ||||||||| ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||       || |||||||    
T  32712408 tataaatcttacatttctcaaatacgtctcttaacttatttcttttattcaatttggtccaattttgataattttaatcccctaaaaaaagagaccgttg 32712507  T
Q  123 gattacgaaggtctatcagattttatagtgtatcatcaacacctaatttattta 176  Q
    ||||||| |||||||||| ||||||||||||| || |||||||||| |||||||    
T  32712508 gattacggaggtctatcaaattttatagtgtaccaccaacacctaacttattta 32712561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 24 - 176
Target Start/End: Original strand, 18572939 - 18573090
Alignment:
Q  24 ataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttgg 123  Q
    ||||||||||| ||||| ||| ||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||||       || || |||||    
T  18572939 ataagtcttaactttcttaaaaacgtcccttaacttatttcttttattcaaattgggccaattttgataattttaatcccct-aaaaaagacactgttgg 18573037  T
Q  124 attacgaaggtctatcagattttatagtgtatcatcaacacctaatttattta 176  Q
    |||||| |||||||||| |||||| ||||||||| |||||| |||||||||||    
T  18573038 attacggaggtctatcaaattttacagtgtatcaccaacacataatttattta 18573090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 23 - 176
Target Start/End: Complemental strand, 19383219 - 19383067
Alignment:
Q  23 tataagtcttaattttctcaaacacgtcccttaactga--tttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgt 120  Q
    |||||||||||| ||||||||||||||||||||||| |  ||| |||||||||||||| || |||||||||||||||||| ||||       || |||||    
T  19383219 tataagtcttaactttctcaaacacgtcccttaacttattttttttttattcaatttgatctaattttgataattttaatgccct--aaaaagagaccgt 19383122  T
Q  121 tggattacgaaggtctatcagattttatagtgtatcatcaacacctaatttattta 176  Q
    |||||||||| |||||||||||||||||||||||||| ||||| ||||||||||||    
T  19383121 tggattacgatggtctatcagattttatagtgtatca-caacatctaatttattta 19383067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 236 - 311
Target Start/End: Complemental strand, 32348895 - 32348820
Alignment:
Q  236 aaaaaaccaagattcaattccaaatcacactcttccaattccattctctagattcatcatcaattctcatctctgc 311  Q
    |||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32348895 aaaaaaccaagattaaatttcaaatcacactcttccaattccattctctagattcatcatcaattctcatctctgc 32348820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 73 - 176
Target Start/End: Original strand, 27719839 - 27719941
Alignment:
Q  73 aatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttggattacgaaggtctatcagattttatagtgtatcatcaacacctaattta 172  Q
    |||||| |||||||||||| |||||||||||||       || |||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||    
T  27719839 aatttgatccaattttgatgattttaatcccctaaaaaa-gagaccgttggattacggaggtctatcagattttatagtgtatcaccaacacctaattta 27719937  T
Q  173 ttta 176  Q
    ||||    
T  27719938 ttta 27719941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 71 - 176
Target Start/End: Original strand, 21094506 - 21094611
Alignment:
Q  71 tcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttggattacgaaggtctatcagattttatagtgtatcatcaacacctaatt 170  Q
    |||||||| |||||||||||||| |||||||||||       || |||||||||||||| |||||||  |||||||||||||||||| ||||||||||||    
T  21094506 tcaatttgatccaattttgataactttaatcccctaaaaaaagagaccgttggattacggaggtctactagattttatagtgtatcaccaacacctaatt 21094605  T
Q  171 tattta 176  Q
    ||||||    
T  21094606 tattta 21094611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 24 - 105
Target Start/End: Complemental strand, 29479258 - 29479177
Alignment:
Q  24 ataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccct 105  Q
    |||||| |||| |||||||| ||||||| |||||| ||||||||||||||||||||||||||||| ||||||| ||||||||    
T  29479258 ataagttttaactttctcaatcacgtcctttaacttatttcttttattcaatttggtccaattttaataatttcaatcccct 29479177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 119 - 176
Target Start/End: Complemental strand, 21095348 - 21095291
Alignment:
Q  119 gttggattacgaaggtctatcagattttatagtgtatcatcaacacctaatttattta 176  Q
    ||||||||||| ||||||| ||||||||||||||||||| ||||||||||||||||||    
T  21095348 gttggattacggaggtctaccagattttatagtgtatcaccaacacctaatttattta 21095291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 24 - 82
Target Start/End: Complemental strand, 18574357 - 18574299
Alignment:
Q  24 ataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtcc 82  Q
    ||||||||||| |||||||| ||||||||| |||| |||||||||||||||||||||||    
T  18574357 ataagtcttaactttctcaagcacgtccctgaacttatttcttttattcaatttggtcc 18574299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 118 - 173
Target Start/End: Original strand, 13561421 - 13561476
Alignment:
Q  118 cgttggattacgaaggtctatcagattttatagtgtatcatcaacacctaatttat 173  Q
    |||||||| | ||||||| ||||||| | ||||||||||| |||||||||||||||    
T  13561421 cgttggataaagaaggtccatcagatctaatagtgtatcaccaacacctaatttat 13561476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 82
Target Start/End: Complemental strand, 3000893 - 3000859
Alignment:
Q  48 gtcccttaactgatttcttttattcaatttggtcc 82  Q
    ||||||||||| |||||||||||||||||||||||    
T  3000893 gtcccttaacttatttcttttattcaatttggtcc 3000859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 121 - 171
Target Start/End: Complemental strand, 7629773 - 7629723
Alignment:
Q  121 tggattacgaaggtctatcagattttatagtgtatcatcaacacctaattt 171  Q
    |||||||||||| | |||||||||||||||||||||  ||||| |||||||    
T  7629773 tggattacgaagatttatcagattttatagtgtatctccaacatctaattt 7629723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 176
Target Start/End: Complemental strand, 18574270 - 18574225
Alignment:
Q  131 aggtctatcagattttatagtgtatcatcaacacctaatttattta 176  Q
    |||||||||||||||||||||||| || |||||||  |||||||||    
T  18574270 aggtctatcagattttatagtgtaccaccaacaccggatttattta 18574225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 81
Target Start/End: Original strand, 29477777 - 29477810
Alignment:
Q  48 gtcccttaactgatttcttttattcaatttggtc 81  Q
    ||||||||||| ||||||||||||||||||||||    
T  29477777 gtcccttaacttatttcttttattcaatttggtc 29477810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 121; Significance: 5e-62; HSPs: 73)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 23 - 176
Target Start/End: Complemental strand, 28777752 - 28777599
Alignment:
Q  23 tataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttg 122  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       || |||||||    
T  28777752 tataagtcttaactttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctaaaaaaagagaccgttg 28777653  T
Q  123 gattacgaaggtctatcagattttatagtgtatcatcaacacctaatttattta 176  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  28777652 gattacggaggtctatcagattttatagtgtatcatcaacacctaatttattta 28777599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 23 - 176
Target Start/End: Original strand, 28776501 - 28776654
Alignment:
Q  23 tataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttg 122  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       || |||||||    
T  28776501 tataaatcttaattttctcaaacaagtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctaaaaacagagaccgttg 28776600  T
Q  123 gattacgaaggtctatcagattttatagtgtatcatcaacacctaatttattta 176  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||||||||||    
T  28776601 gattacggaggtctatcagattttataatgtatcatcaacacctaatttattta 28776654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 24 - 171
Target Start/End: Complemental strand, 31938371 - 31938224
Alignment:
Q  24 ataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttgg 123  Q
    ||||||||||| ||||||||||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||||       || ||||||||    
T  31938371 ataagtcttaactttctcaaacacgtcccttaacttatttcttttattcaatttagtccaattttaataattttaatcccctaaaaaaagagaccgttgg 31938272  T
Q  124 attacgaaggtctatcagattttatagtgtatcatcaacacctaattt 171  Q
    ||||||||||||||| |||||||||||||||||| |||||||||||||    
T  31938271 attacgaaggtctataagattttatagtgtatcaccaacacctaattt 31938224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 24 - 176
Target Start/End: Original strand, 31937089 - 31937241
Alignment:
Q  24 ataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttgg 123  Q
    ||||||||||| ||||||||||||||||||| ||| |||| ||||||||| |||||||||||||||||||||||||||||||       || ||||||||    
T  31937089 ataagtcttaactttctcaaacacgtcccttcacttatttattttattcattttggtccaattttgataattttaatcccctaaaaaaagagaccgttgg 31937188  T
Q  124 attacgaaggtctatcagattttatagtgtatcatcaacacctaatttattta 176  Q
    |||||| ||||||||||||||||||||||||||| ||||||||||||| ||||    
T  31937189 attacggaggtctatcagattttatagtgtatcaccaacacctaattttttta 31937241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 20 - 176
Target Start/End: Original strand, 37609371 - 37609527
Alignment:
Q  20 tcatataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccg 119  Q
    ||||||||||||||| |||||||||||||||||| |||| ||||||||||||||||||| ||||||||| ||||||||||||||||       || ||||    
T  37609371 tcatataagtcttaactttctcaaacacgtccctcaacttatttcttttattcaatttgatccaattttaataattttaatcccctaaaaaaagagaccg 37609470  T
Q  120 ttggattacgaaggtctatcagattttatagtgtatcatcaacacctaatttattta 176  Q
    |||||||| | |||||||| |||||| ||||||| ||||||||||||||||||||||    
T  37609471 ttggattagggaggtctataagatttaatagtgtctcatcaacacctaatttattta 37609527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 24 - 176
Target Start/End: Complemental strand, 43394118 - 43393965
Alignment:
Q  24 ataagtcttaattttctcaaacacgtcccttaactgattt-cttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttg 122  Q
    ||||||||||| ||||||||| ||||||||||||| |||| ||||||||||| |||||||||||||||||||||||| |||||       || |||||||    
T  43394118 ataagtcttaactttctcaaagacgtcccttaacttattttcttttattcaaattggtccaattttgataattttaaccccctaaaaaaagagaccgttg 43394019  T
Q  123 gattacgaaggtctatcagattttatagtgtatcatcaacacctaatttattta 176  Q
    ||||||| ||||||||||||||||| ||||||||| ||||||||||||||||||    
T  43394018 gattacggaggtctatcagattttacagtgtatcaccaacacctaatttattta 43393965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 24 - 174
Target Start/End: Original strand, 17116256 - 17116405
Alignment:
Q  24 ataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttgg 123  Q
    |||||| |||| ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| ||||       || ||||||||    
T  17116256 ataagtgttaagtttctcaaacacgtcccttaacttatttcttttattcaatttggttcaattttgataattttaat-ccctaaaaaatgacaccgttgg 17116354  T
Q  124 attacgaaggtctatcagattttatagtgtatcatcaacacctaatttatt 174  Q
    |||||| ||||| |||||| |||||||||||||| ||||||||||||||||    
T  17116355 attacggaggtccatcagagtttatagtgtatcaccaacacctaatttatt 17116405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 24 - 169
Target Start/End: Complemental strand, 17742357 - 17742211
Alignment:
Q  24 ataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttgg 123  Q
    ||||||||||| ||||||||||||||||||||||| |||||||||||| |||||| ||||||||||||||||||||||||||       || ||||||||    
T  17742357 ataagtcttaactttctcaaacacgtcccttaacttatttcttttattaaatttgatccaattttgataattttaatcccctaaaaaaagagaccgttgg 17742258  T
Q  124 attacgaaggtctatcagattt-tatagtgtatcatcaacacctaat 169  Q
    |||||| ||||||||||||||| || ||||||||| |||||||||||    
T  17742257 attacggaggtctatcagatttatacagtgtatcaacaacacctaat 17742211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 24 - 169
Target Start/End: Complemental strand, 19043677 - 19043531
Alignment:
Q  24 ataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttgg 123  Q
    ||||||||||| ||||||||||||||||||||||| |||||||||||| |||||| ||||||||||||||||||||||||||       || ||||||||    
T  19043677 ataagtcttaactttctcaaacacgtcccttaacttatttcttttattaaatttgatccaattttgataattttaatcccctaaaaaaagagaccgttgg 19043578  T
Q  124 attacgaaggtctatcagattt-tatagtgtatcatcaacacctaat 169  Q
    |||||| ||||||||||||||| || ||||||||| |||||||||||    
T  19043577 attacggaggtctatcagatttatacagtgtatcaacaacacctaat 19043531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 24 - 169
Target Start/End: Complemental strand, 5691158 - 5691014
Alignment:
Q  24 ataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttgg 123  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||| || || |||||||||||||||||| ||||||||       || ||||||||    
T  5691158 ataagtcttaattttctcaaacacgtcccttaacttatttcttttattaaactt-gtccaattttgataatttaaatcccctaaaaaaagagaccgttgg 5691060  T
Q  124 attacgaaggtctatcagattttatagtgtatcatcaacacctaat 169  Q
    |||||| ||||||||||||||||| ||||||||| |||||||||||    
T  5691059 attacggaggtctatcagattttacagtgtatcaccaacacctaat 5691014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 36 - 176
Target Start/End: Original strand, 5689785 - 5689925
Alignment:
Q  36 tttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttggattacgaaggtc 135  Q
    |||| |||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||  |       || |||||||||||||| |||||    
T  5689785 tttcccaaacacgtcccttaacttatttcttttattaaatttggtccaattttgataattttaatcctttaaaacaagagaccgttggattacggaggtc 5689884  T
Q  136 tatcagattttatagtgtatcatcaacacctaatttattta 176  Q
    |||||||||||||||||||||| |||||| |||||||||||    
T  5689885 tatcagattttatagtgtatcaccaacacttaatttattta 5689925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 36 - 176
Target Start/End: Complemental strand, 21729240 - 21729100
Alignment:
Q  36 tttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttggattacgaaggtc 135  Q
    ||||||||||||||||||||||| ||||||||||||||||||| | ||||||||||||||||||||| ||       || ||| |||||||| |||||||    
T  21729240 tttctcaaacacgtcccttaacttatttcttttattcaatttgattcaattttgataattttaatcctctaaaaaatgagaccattggattatgaaggtc 21729141  T
Q  136 tatcagattttatagtgtatcatcaacacctaatttattta 176  Q
    || || |||||||||||||||||||||||||||||||||||    
T  21729140 taccatattttatagtgtatcatcaacacctaatttattta 21729100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 24 - 176
Target Start/End: Complemental strand, 35759295 - 35759143
Alignment:
Q  24 ataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttgg 123  Q
    ||||||||||| ||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||            | ||||||||    
T  35759295 ataagtcttaactttctcaaacacgtcccttaatttatttcttttattcaatttggtccaattttgataattttaatctaaaaaaaaaacagaccgttgg 35759196  T
Q  124 attacgaaggtctatcagattttatagtgtatcatcaacacctaatttattta 176  Q
    |||||||| ||||||||||||||| ||||||||| ||||||||||||||||||    
T  35759195 attacgaatgtctatcagattttacagtgtatcaccaacacctaatttattta 35759143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 24 - 176
Target Start/End: Original strand, 46902385 - 46902537
Alignment:
Q  24 ataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttgg 123  Q
    |||| |||||| ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||       || |  ||| |    
T  46902385 ataaatcttaactttctcaaacacgtcccttaacttatttcttttattcaatttggtgcaattttgataattttaatcccctaaaagaagagattgttag 46902484  T
Q  124 attacgaaggtctatcagattttatagtgtatcatcaacacctaatttattta 176  Q
    |||||| |||||||||||||||||||||||||||  |||||| ||||||||||    
T  46902485 attacggaggtctatcagattttatagtgtatcactaacaccaaatttattta 46902537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 24 - 176
Target Start/End: Complemental strand, 46903688 - 46903536
Alignment:
Q  24 ataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttgg 123  Q
    |||| |||||| ||| |||||||||||| |||||| ||||||||||||||||||||| |||||||||| |||||||||||||        | ||||||||    
T  46903688 ataaatcttaagtttttcaaacacgtcctttaacttatttcttttattcaatttggtacaattttgatgattttaatcccctaaaaaaaaagaccgttgg 46903589  T
Q  124 attacgaaggtctatcagattttatagtgtatcatcaacacctaatttattta 176  Q
    |||||| |||||||| |||||||||||||||||| ||||||||||||||||||    
T  46903588 attacggaggtctattagattttatagtgtatcaccaacacctaatttattta 46903536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 24 - 176
Target Start/End: Complemental strand, 47431251 - 47431099
Alignment:
Q  24 ataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttgg 123  Q
    |||||| |||| ||| |||||||||| |||||||| ||||||||| ||||||||||||||||||||||||||||||||||||       || ||||||||    
T  47431251 ataagttttaactttttcaaacacgttccttaacttatttcttttgttcaatttggtccaattttgataattttaatcccctaaaaaaagagaccgttgg 47431152  T
Q  124 attacgaaggtctatcagattttatagtgtatcatcaacacctaatttattta 176  Q
    |||| | |||||||| |||||||||||||||||| | ||||||||||||||||    
T  47431151 attatggaggtctattagattttatagtgtatcacccacacctaatttattta 47431099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 29 - 176
Target Start/End: Original strand, 17740889 - 17741036
Alignment:
Q  29 tcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttggattac 128  Q
    |||||| ||||||||||| ||||||||||| |||||||||||| |||||| |||||||||||||||||||||||  |       || ||||| |||||||    
T  17740889 tcttaactttctcaaacatgtcccttaacttatttcttttattaaatttgatccaattttgataattttaatcctttaaaaatagagaccgtcggattac 17740988  T
Q  129 gaaggtctatcagattttatagtgtatcatcaacacctaatttattta 176  Q
    | ||||||||||||||||||||||||||| ||||||||||||||||||    
T  17740989 ggaggtctatcagattttatagtgtatcaccaacacctaatttattta 17741036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 29 - 176
Target Start/End: Original strand, 19042209 - 19042356
Alignment:
Q  29 tcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttggattac 128  Q
    |||||| ||||||||||| ||||||||||| |||||||||||| |||||| |||||||||||||||||||||||  |       || ||||| |||||||    
T  19042209 tcttaactttctcaaacatgtcccttaacttatttcttttattaaatttgatccaattttgataattttaatcctttaaaaatagagaccgtcggattac 19042308  T
Q  129 gaaggtctatcagattttatagtgtatcatcaacacctaatttattta 176  Q
    | ||||||||||||||||||||||||||| ||||||||||||||||||    
T  19042309 ggaggtctatcagattttatagtgtatcaccaacacctaatttattta 19042356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 25 - 171
Target Start/End: Complemental strand, 54354454 - 54354308
Alignment:
Q  25 taagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttgga 124  Q
    |||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| ||||       || ||| |||||    
T  54354454 taagtcttaactttctcaaacacgtcccttaacttatttctttgattcaatttggtccaattttgataattttaattccctataaaaagagaccattgga 54354355  T
Q  125 ttacgaaggtctatcagattttatagtgtatcatcaacacctaattt 171  Q
    |||   ||||||||||||||||| ||||||||| |||||||||||||    
T  54354354 ttatagaggtctatcagattttacagtgtatcaccaacacctaattt 54354308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 20 - 176
Target Start/End: Original strand, 11346862 - 11347018
Alignment:
Q  20 tcatataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccg 119  Q
    |||||||| |||||| ||| |||||||||| |||||| | ||||||||||||||||||| ||||||||||||||||||||||||||       || |||     
T  11346862 tcatataaatcttaactttatcaaacacgtgccttaatttatttcttttattcaatttgttccaattttgataattttaatcccctgaaaagagagacca 11346961  T
Q  120 ttggattacgaaggtctatcagattttatagtgtatcatcaacacctaatttattta 176  Q
    |||||||| ||||||||| || ||| |||||||||||| ||||||||||||||||||    
T  11346962 ttggattatgaaggtctaccatattgtatagtgtatcaccaacacctaatttattta 11347018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 24 - 168
Target Start/End: Original strand, 54353077 - 54353221
Alignment:
Q  24 ataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttgg 123  Q
    ||||||||||| ||| ||||||| ||||||||||| |||||||||| |||||||||||||||||| |||||||||||||||        || ||||||||    
T  54353077 ataagtcttaactttatcaaacatgtcccttaacttatttcttttactcaatttggtccaatttttataattttaatccccgaaaaaaagagaccgttgg 54353176  T
Q  124 attacgaaggtctatcagattttatagtgtatcatcaacacctaa 168  Q
    ||||||||||||||||||||||||| ||||||||  |||||||||    
T  54353177 attacgaaggtctatcagattttatcgtgtatcactaacacctaa 54353221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 53 - 176
Target Start/End: Complemental strand, 37610798 - 37610675
Alignment:
Q  53 ttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttggattacgaaggtctatcagattttatagtg 152  Q
    |||||| |||| |||||||||||||||||||||||||||||||||||||||||        | |||||||||||||| ||||||||||||||||||||||    
T  37610798 ttaacttattttttttattcaatttggtccaattttgataattttaatcccctaaaaaaaaagaccgttggattacggaggtctatcagattttatagtg 37610699  T
Q  153 tatcatcaacacctaatttattta 176  Q
    ||||| ||||||||||||||||||    
T  37610698 tatcaccaacacctaatttattta 37610675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 29 - 176
Target Start/End: Original strand, 52521986 - 52522132
Alignment:
Q  29 tcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttggattac 128  Q
    |||||| |||||||||||||||| || ||| |||| ||||||||||||||||||||||||||||| |||||||||||        | || ||||||||||    
T  52521986 tcttaactttctcaaacacgtcctttcacttatttattttattcaatttggtccaattttgataactttaatcccctaaaaaaa-agacagttggattac 52522084  T
Q  129 gaaggtctatcagattttatagtgtatcatcaacacctaatttattta 176  Q
    | ||||||||||||||||||||||||||| ||||||||||||||||||    
T  52522085 ggaggtctatcagattttatagtgtatcaccaacacctaatttattta 52522132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 25 - 176
Target Start/End: Complemental strand, 53766029 - 53765878
Alignment:
Q  25 taagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttgga 124  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||||||||||||||||       |||||  |||||    
T  53766029 taagtcttaattttctcaaacacgtcccttaacttatttcttttattcaatttgatccaattttaataattttaatcccctaaaaagagaaactattgga 53765930  T
Q  125 ttacgaaggtctatcagattttatagtgtatcatcaacacctaatttattta 176  Q
    ||||| |||||||  |||||||| ||||||||| || || || |||||||||    
T  53765929 ttacggaggtctacgagattttacagtgtatcaccaccatctgatttattta 53765878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 24 - 174
Target Start/End: Complemental strand, 53180868 - 53180718
Alignment:
Q  24 ataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttgg 123  Q
    ||||||| ||| |||||||||||||| | |||||| |||| ||||||||||||| |||||||||| ||||||||||||| ||       || ||||||||    
T  53180868 ataagtcgtaactttctcaaacacgttctttaacttattttttttattcaatttagtccaattttaataattttaatcctctaaaaaaggagaccgttgg 53180769  T
Q  124 attacgaaggtctatcagattttatagtgtatcatcaacacctaatttatt 174  Q
    |||||| |||||||||||||| |||||||||||| ||||||||||||||||    
T  53180768 attacggaggtctatcagattgtatagtgtatcaccaacacctaatttatt 53180718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 24 - 172
Target Start/End: Complemental strand, 2233369 - 2233221
Alignment:
Q  24 ataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttgg 123  Q
    ||||||||||| ||| ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||       || | ||||||    
T  2233369 ataagtcttaactttgtcaaacatgtcccttaacttatttcttttattcaatttggtccaattttgataattttaatcctctaaaaaaagagatcgttgg 2233270  T
Q  124 attacgaaggtctatcagattttatagtgtatcatcaacacctaattta 172  Q
    |||| | || ||||| ||||||||||| |||||| ||||||||||||||    
T  2233269 attatggagatctataagattttatagcgtatcaccaacacctaattta 2233221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 24 - 176
Target Start/End: Original strand, 21727964 - 21728116
Alignment:
Q  24 ataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttgg 123  Q
    ||||||||||| ||||||||||| ||||||||||| ||||||||||||||||||| | |||||||||||||||||||| |||        | || ||| |    
T  21727964 ataagtcttaactttctcaaacatgtcccttaacttatttcttttattcaatttgattcaattttgataattttaatctcctaaaaaagtagactgttag 21728063  T
Q  124 attacgaaggtctatcagattttatagtgtatcatcaacacctaatttattta 176  Q
    ||||||||||||||||  |||||||| ||||||| ||||||||||||||||||    
T  21728064 attacgaaggtctatctcattttataatgtatcaccaacacctaatttattta 21728116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 48 - 176
Target Start/End: Original strand, 35758082 - 35758210
Alignment:
Q  48 gtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttggattacgaaggtctatcagatttta 147  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||           |||||||||||||||||| |||||||||||||||    
T  35758082 gtcccttaacttatttcttttattcaatttggtccaattttgataattttaatccaaaaaaaaaacaaaccgttggattacgaatgtctatcagatttta 35758181  T
Q  148 tagtgtatcatcaacacctaatttattta 176  Q
     ||||||||| ||||||||||||||||||    
T  35758182 cagtgtatcaccaacacctaatttattta 35758210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 24 - 176
Target Start/End: Original strand, 55209836 - 55209987
Alignment:
Q  24 ataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttgg 123  Q
    |||||| |||| ||||||||||||||||||||| | |||||||||||| |||||||||||||||||||||||||||||| |        || ||| ||||    
T  55209836 ataagttttaactttctcaaacacgtcccttaatttatttcttttatttaatttggtccaattttgataattttaatccac-gaaaaaagagaccattgg 55209934  T
Q  124 attacgaaggtctatcagattttatagtgtatcatcaacacctaatttattta 176  Q
    |||||| |||||||||||| |||||||||||| | ||||||||||||||||||    
T  55209935 attacggaggtctatcagaatttatagtgtattaccaacacctaatttattta 55209987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 24 - 178
Target Start/End: Complemental strand, 50881173 - 50881026
Alignment:
Q  24 ataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttgg 123  Q
    ||||||||||| ||||||||||||||||||||| | |||||||||||||||||| || ||||||||||||||||||||||||        |||   ||||    
T  50881173 ataagtcttaactttctcaaacacgtcccttaatttatttcttttattcaatttagttcaattttgataattttaatccccta-------aaaaaattgg 50881081  T
Q  124 attacgaaggtctatcagattttatagtgtatcatcaacacctaatttatttatt 178  Q
    |||| ||||||||| || ||||||||||||| || ||||||||||||||||||||    
T  50881080 attatgaaggtctaccatattttatagtgtaccaccaacacctaatttatttatt 50881026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 24 - 176
Target Start/End: Original strand, 2232656 - 2232808
Alignment:
Q  24 ataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttgg 123  Q
    ||||||||||| ||||||||| ||||||||||| | ||||||||||||||||||  ||||||||| ||||||||||||||||        | ||| ||||    
T  2232656 ataagtcttaactttctcaaatacgtcccttaatttatttcttttattcaatttaatccaattttaataattttaatcccctagaaaaaaagaccattgg 2232755  T
Q  124 attacgaaggtctatcagattttatagtgtatcatcaacacctaatttattta 176  Q
    |||||| |||||||| ||||||||  |||||||| ||||||||||||||||||    
T  2232756 attacggaggtctatgagattttacggtgtatcagcaacacctaatttattta 2232808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 24 - 171
Target Start/End: Complemental strand, 52525423 - 52525276
Alignment:
Q  24 ataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttgg 123  Q
    ||||||||||| |||||||||||| |||||||||| |||||||||||||||||| |||||||||| ||||||||||||||||       || ||||||||    
T  52525423 ataagtcttaactttctcaaacacatcccttaacttatttcttttattcaatttagtccaattttaataattttaatcccctaaaaaaagagaccgttgg 52525324  T
Q  124 attacgaaggtctatcagattttatagtgtatcatcaacacctaattt 171  Q
    |||| ||||||  || |||||||||| ||| ||| ||||| |||||||    
T  52525323 attatgaaggttaataagattttataatgtgtcaccaacatctaattt 52525276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 24 - 176
Target Start/End: Complemental strand, 23073438 - 23073286
Alignment:
Q  24 ataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttgg 123  Q
    |||| |||||| ||||||||| | ||||||||||| |||||||||||||||  |||| ||||||||||||||||||||||||       || |||||||     
T  23073438 ataaatcttaactttctcaaagatgtcccttaacttatttcttttattcaaactggttcaattttgataattttaatcccctaaaaaaagagaccgttga 23073339  T
Q  124 attacgaaggtctatcagattttatagtgtatcatcaacacctaatttattta 176  Q
    |||||| |||| ||||| ||||||  |||||||| ||||||||||||||||||    
T  23073338 attacggaggtgtatcaaattttacggtgtatcaccaacacctaatttattta 23073286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 236 - 311
Target Start/End: Complemental strand, 28777539 - 28777464
Alignment:
Q  236 aaaaaaccaagattcaattccaaatcacactcttccaattccattctctagattcatcatcaattctcatctctgc 311  Q
    |||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28777539 aaaaaatcaagattcaatttcaaatcacactcttccaattccattctctagattcatcatcaattctcatctctgc 28777464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 24 - 176
Target Start/End: Complemental strand, 47917676 - 47917525
Alignment:
Q  24 ataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttgg 123  Q
    |||| ||||| ||||||||||||||||||| |||| ||||||||||||||||||| || |||||| ||||||||||||||||        | |  |||||    
T  47917676 ataaatcttagttttctcaaacacgtccct-aacttatttcttttattcaatttgatctaattttaataattttaatcccctaaaaataaagattgttgg 47917578  T
Q  124 attacgaaggtctatcagattttatagtgtatcatcaacacctaatttattta 176  Q
    |||||| |||| |||||||||||||||||||| | ||||||| ||||||||||    
T  47917577 attacggaggtttatcagattttatagtgtattaccaacaccgaatttattta 47917525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 60 - 171
Target Start/End: Original strand, 10978095 - 10978206
Alignment:
Q  60 atttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttggattacgaaggtctatcagattttatagtgtatcatc 159  Q
    ||||||||||||||| || |||||||||| ||||||||||||||||       |||||||||||||||||||||||||| | |||||||||||||||| |    
T  10978095 atttcttttattcaacttagtccaattttaataattttaatcccctaaaaaaagaaaccgttggattacgaaggtctataaaattttatagtgtatcacc 10978194  T
Q  160 aacacctaattt 171  Q
    | ||||||||||    
T  10978195 atcacctaattt 10978206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 24 - 105
Target Start/End: Original strand, 53764482 - 53764563
Alignment:
Q  24 ataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccct 105  Q
    ||||||||||| |||||||||||||||| |||||| |||||||||||||||||| ||| |||||||||||||||||||||||    
T  53764482 ataagtcttaactttctcaaacacgtcctttaacttatttcttttattcaatttagtcaaattttgataattttaatcccct 53764563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 24 - 176
Target Start/End: Original strand, 47429681 - 47429828
Alignment:
Q  24 ataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaa--ccgtt 121  Q
    ||||||||||| |||||||||||||||| |||       |||||| ||||||||||||||||||||||||||||||||||||        |||  | |||    
T  47429681 ataagtcttaactttctcaaacacgtccttta-------tcttttgttcaatttggtccaattttgataattttaatcccctaaaaaaaaaaagactgtt 47429773  T
Q  122 ggattacgaaggtctatcagattttatagtgtatcatcaacacctaatttattta 176  Q
    |||||||| |||||||| |||||||||||||||||| ||||| ||||||||||||    
T  47429774 ggattacggaggtctattagattttatagtgtatcaccaacatctaatttattta 47429828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 24 - 101
Target Start/End: Original strand, 23091245 - 23091322
Alignment:
Q  24 ataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatc 101  Q
    ||||||||||| ||||||||||||||| ||||||| | ||||||||||||||||||||||| ||||||||||||||||    
T  23091245 ataagtcttaactttctcaaacacgtctcttaacttaattcttttattcaatttggtccaactttgataattttaatc 23091322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 65 - 171
Target Start/End: Original strand, 50879782 - 50879888
Alignment:
Q  65 ttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttggattacgaaggtctatcagattttatagtgtatcatcaacac 164  Q
    ||||||||||||| ||||||||||||||||||||||||| |        ||| |||| ||||||| ||||||||||||||||||||||||||| ||||||    
T  50879782 ttttattcaattttgtccaattttgataattttaatcccatagaaaaaaaaatcgttagattacggaggtctatcagattttatagtgtatcaccaacac 50879881  T
Q  165 ctaattt 171  Q
    |||||||    
T  50879882 ctaattt 50879888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 24 - 176
Target Start/End: Complemental strand, 10979239 - 10979087
Alignment:
Q  24 ataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttgg 123  Q
    |||| |||||| |||||||||||||||  || ||| ||||||||||||||||||| | ||||||||||||||||| |||| |       || ||| ||||    
T  10979239 ataaatcttaaatttctcaaacacgtcatttcacttatttcttttattcaatttgattcaattttgataattttagtccctttaaaaaagagaccattgg 10979140  T
Q  124 attacgaaggtctatcagattttatagtgtatcatcaacacctaatttattta 176  Q
    |||||| |||| ||||| ||||||  |||||||| ||||| ||||||||||||    
T  10979139 attacggaggtttatcaaattttacggtgtatcaccaacatctaatttattta 10979087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 24 - 176
Target Start/End: Complemental strand, 11348535 - 11348384
Alignment:
Q  24 ataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttgg 123  Q
    |||||| |||| ||| ||| ||| || |||||||| |||||||||||| |||||| ||||||||||||||||||||| || |       || |||||||     
T  11348535 ataagtattaactttatcatacatgttccttaactaatttcttttatttaatttgatccaattttgataattttaattccttagaaaaagagaccgttga 11348436  T
Q  124 attacgaaggtctatcagattttatagtgtatcatcaacacctaatttattta 176  Q
    |||||| ||||||||||||||||||||| ||||| | |||||||||| |||||    
T  11348435 attacggaggtctatcagattttatagtatatca-ccacacctaattaattta 11348384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 24 - 103
Target Start/End: Original strand, 53178755 - 53178834
Alignment:
Q  24 ataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatccc 103  Q
    ||||| ||||| |||||||||||||| |||||||| ||||||||||||||||||| |||||||||||| |||||||||||    
T  53178755 ataagccttaactttctcaaacacgttccttaacttatttcttttattcaatttgatccaattttgatcattttaatccc 53178834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 19 - 178
Target Start/End: Complemental strand, 15290558 - 15290400
Alignment:
Q  19 atcatataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaacc 118  Q
    |||| ||||||||||||||||||||||| |||  |||| | ||||| ||||||||||||| ||||||||| ||||||||||| |  |        | |||    
T  15290558 atcacataagtcttaattttctcaaacatgtctattaaattatttcatttattcaatttgatccaattttaataattttaat-catttaaaaaaaagacc 15290460  T
Q  119 gttggattacgaaggtctatcagattttatagtgtatcatcaacacctaatttatttatt 178  Q
     ||| |||| ||||||||| || |||||||||||||||||||| ||||||||||||||||    
T  15290459 attgaattatgaaggtctaccatattttatagtgtatcatcaatacctaatttatttatt 15290400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 51 - 176
Target Start/End: Complemental strand, 55210945 - 55210820
Alignment:
Q  51 ccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttggattacgaaggtctatcagattttatag 150  Q
    |||||||| |||||||||||| |||||||  ||||||||||||||||||||| ||       || || |||| |||||| || ||||||||||||||||     
T  55210945 ccttaacttatttcttttattaaatttggatcaattttgataattttaatccactaaaaaaagatactgttgaattacggagatctatcagattttataa 55210846  T
Q  151 tgtatcatcaacacctaatttattta 176  Q
    ||||||| |||||| |||||||||||    
T  55210845 tgtatcaccaacacataatttattta 55210820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 31 - 100
Target Start/End: Complemental strand, 33113376 - 33113306
Alignment:
Q  31 ttaattttctcaaacacgtcccttaactgatttctttt-attcaatttggtccaattttgataattttaat 100  Q
    |||| ||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  33113376 ttaactttttcaaacacgtcccttaacttatttctttttattcaatttggtccaattttgataattttaat 33113306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 24 - 102
Target Start/End: Complemental strand, 46986154 - 46986077
Alignment:
Q  24 ataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcc 102  Q
    ||||||||||| | ||||||||||||||||||||| |||| | ||||| ||||||||| ||||||||||||||||||||    
T  46986154 ataagtcttaactctctcaaacacgtcccttaacttattt-tcttattaaatttggtcaaattttgataattttaatcc 46986077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 236 - 305
Target Start/End: Original strand, 47429942 - 47430011
Alignment:
Q  236 aaaaaaccaagattcaattccaaatcacactcttccaattccattctctagattcatcatcaattctcat 305  Q
    |||||| | |||||||||| ||||||||||||||||||||||| |||||||||| ||||| |||||||||    
T  47429942 aaaaaatccagattcaatttcaaatcacactcttccaattccaatctctagatttatcatgaattctcat 47430011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 24 - 102
Target Start/End: Complemental strand, 17117463 - 17117387
Alignment:
Q  24 ataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcc 102  Q
    ||||||||||| ||||||||||||||||||||| |  ||| ||||||||||||||| | ||||||||| ||||||||||    
T  17117463 ataagtcttaagtttctcaaacacgtcccttaatt--ttttttttattcaatttgggcaaattttgatgattttaatcc 17117387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 24 - 82
Target Start/End: Original strand, 43392680 - 43392738
Alignment:
Q  24 ataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtcc 82  Q
    ||||||||||| |||||||| ||||||||| |||| |||||||||||||||||||||||    
T  43392680 ataagtcttaactttctcaagcacgtccctgaacttatttcttttattcaatttggtcc 43392738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 24 - 82
Target Start/End: Original strand, 23072114 - 23072171
Alignment:
Q  24 ataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtcc 82  Q
    ||||||||||| ||||||||| |||||| |||||| |||||||||||||||||||||||    
T  23072114 ataagtcttaactttctcaaagacgtcc-ttaacttatttcttttattcaatttggtcc 23072171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 113 - 171
Target Start/End: Original strand, 53764893 - 53764951
Alignment:
Q  113 gaaaccgttggattacgaaggtctatcagattttatagtgtatcatcaacacctaattt 171  Q
    |||||||||| |||||| |||||||||||||||||| |||||||| |||||| ||||||    
T  53764893 gaaaccgttgaattacggaggtctatcagattttatggtgtatcaccaacacttaattt 53764951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 131 - 178
Target Start/End: Original strand, 43392767 - 43392814
Alignment:
Q  131 aggtctatcagattttatagtgtatcatcaacacctaatttatttatt 178  Q
    |||||||||||||||||||||||| || ||||||| ||||||||||||    
T  43392767 aggtctatcagattttatagtgtaccaccaacaccaaatttatttatt 43392814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 82
Target Start/End: Complemental strand, 10979275 - 10979241
Alignment:
Q  48 gtcccttaactgatttcttttattcaatttggtcc 82  Q
    ||||||||||| |||||||||||||||||||||||    
T  10979275 gtcccttaacttatttcttttattcaatttggtcc 10979241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 82
Target Start/End: Original strand, 31937053 - 31937087
Alignment:
Q  48 gtcccttaactgatttcttttattcaatttggtcc 82  Q
    ||||||||||| |||||||||||||||||||||||    
T  31937053 gtcccttaacttatttcttttattcaatttggtcc 31937087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 118 - 176
Target Start/End: Complemental strand, 33111815 - 33111757
Alignment:
Q  118 cgttggattacgaaggtctatcagattttatagtgtatcatcaacacctaatttattta 176  Q
    ||||| |||||| |||||||| | |||||||||||||||  | ||||||||||||||||    
T  33111815 cgttgtattacggaggtctataaaattttatagtgtatctcccacacctaatttattta 33111757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 82
Target Start/End: Original strand, 34014526 - 34014560
Alignment:
Q  48 gtcccttaactgatttcttttattcaatttggtcc 82  Q
    ||||||||||| |||||||||||||||||||||||    
T  34014526 gtcccttaacttatttcttttattcaatttggtcc 34014560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 82
Target Start/End: Original strand, 46902349 - 46902383
Alignment:
Q  48 gtcccttaactgatttcttttattcaatttggtcc 82  Q
    ||||||||||| |||||||||||||||||||||||    
T  46902349 gtcccttaacttatttcttttattcaatttggtcc 46902383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 82
Target Start/End: Complemental strand, 46903724 - 46903690
Alignment:
Q  48 gtcccttaactgatttcttttattcaatttggtcc 82  Q
    ||||||||||| |||||||||||||||||||||||    
T  46903724 gtcccttaacttatttcttttattcaatttggtcc 46903690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 81
Target Start/End: Complemental strand, 11348571 - 11348538
Alignment:
Q  48 gtcccttaactgatttcttttattcaatttggtc 81  Q
    ||||||||||| ||||||||||||||||||||||    
T  11348571 gtcccttaacttatttcttttattcaatttggtc 11348538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 81
Target Start/End: Complemental strand, 17117499 - 17117466
Alignment:
Q  48 gtcccttaactgatttcttttattcaatttggtc 81  Q
    ||||||||||| ||||||||||||||||||||||    
T  17117499 gtcccttaacttatttcttttattcaatttggtc 17117466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 81
Target Start/End: Complemental strand, 31938407 - 31938374
Alignment:
Q  48 gtcccttaactgatttcttttattcaatttggtc 81  Q
    ||||||||||| ||||||||||||||||||||||    
T  31938407 gtcccttaacttatttcttttattcaatttggtc 31938374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 81
Target Start/End: Original strand, 43392644 - 43392677
Alignment:
Q  48 gtcccttaactgatttcttttattcaatttggtc 81  Q
    ||||||||||| ||||||||||||||||||||||    
T  43392644 gtcccttaacttatttcttttattcaatttggtc 43392677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 81
Target Start/End: Complemental strand, 43394154 - 43394121
Alignment:
Q  48 gtcccttaactgatttcttttattcaatttggtc 81  Q
    ||||||||||| ||||||||||||||||||||||    
T  43394154 gtcccttaacttatttcttttattcaatttggtc 43394121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 81
Target Start/End: Original strand, 47429645 - 47429678
Alignment:
Q  48 gtcccttaactgatttcttttattcaatttggtc 81  Q
    ||||||||||| ||||||||||||||||||||||    
T  47429645 gtcccttaacttatttcttttattcaatttggtc 47429678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 82
Target Start/End: Original strand, 50879513 - 50879546
Alignment:
Q  49 tcccttaactgatttcttttattcaatttggtcc 82  Q
    |||||||||| |||||||||||||||||||||||    
T  50879513 tcccttaacttatttcttttattcaatttggtcc 50879546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 81
Target Start/End: Complemental strand, 52525459 - 52525426
Alignment:
Q  48 gtcccttaactgatttcttttattcaatttggtc 81  Q
    ||||||||||| ||||||||||||||||||||||    
T  52525459 gtcccttaacttatttcttttattcaatttggtc 52525426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 49 - 81
Target Start/End: Original strand, 2232621 - 2232653
Alignment:
Q  49 tcccttaactgatttcttttattcaatttggtc 81  Q
    |||||||||| ||||||||||||||||||||||    
T  2232621 tcccttaacttatttcttttattcaatttggtc 2232653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 49 - 81
Target Start/End: Original strand, 17116221 - 17116253
Alignment:
Q  49 tcccttaactgatttcttttattcaatttggtc 81  Q
    |||||||||| ||||||||||||||||||||||    
T  17116221 tcccttaacttatttcttttattcaatttggtc 17116253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 49 - 81
Target Start/End: Complemental strand, 17742392 - 17742360
Alignment:
Q  49 tcccttaactgatttcttttattcaatttggtc 81  Q
    |||||||||| ||||||||||||||||||||||    
T  17742392 tcccttaacttatttcttttattcaatttggtc 17742360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 49 - 81
Target Start/End: Complemental strand, 19043712 - 19043680
Alignment:
Q  49 tcccttaactgatttcttttattcaatttggtc 81  Q
    |||||||||| ||||||||||||||||||||||    
T  19043712 tcccttaacttatttcttttattcaatttggtc 19043680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 48 - 80
Target Start/End: Complemental strand, 53766066 - 53766034
Alignment:
Q  48 gtcccttaactgatttcttttattcaatttggt 80  Q
    ||||||||||| |||||||||||||||||||||    
T  53766066 gtcccttaacttatttcttttattcaatttggt 53766034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 48 - 80
Target Start/End: Original strand, 55209800 - 55209832
Alignment:
Q  48 gtcccttaactgatttcttttattcaatttggt 80  Q
    ||||||||||| |||||||||||||||||||||    
T  55209800 gtcccttaacttatttcttttattcaatttggt 55209832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 117; Significance: 1e-59; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 23 - 176
Target Start/End: Complemental strand, 7111540 - 7111387
Alignment:
Q  23 tataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttg 122  Q
    |||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||       || |||||||    
T  7111540 tataagtcttaactttctcaaacacgtccattaactgatttcttttattcaatttggtccaattttgataattttaatcccctaaaaaaagagaccgttg 7111441  T
Q  123 gattacgaaggtctatcagattttatagtgtatcatcaacacctaatttattta 176  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  7111440 gattacggaggtctatcagattttatagtgtatcatcaacacctaatttattta 7111387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 23 - 176
Target Start/End: Original strand, 7110279 - 7110432
Alignment:
Q  23 tataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttg 122  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       || | |||||    
T  7110279 tataagtcttaactttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctaaaaaaagagatcgttg 7110378  T
Q  123 gattacgaaggtctatcagattttatagtgtatcatcaacacctaatttattta 176  Q
    |||| || |||||||||||||||||||||||||||||||| |||||||||||||    
T  7110379 gattgcggaggtctatcagattttatagtgtatcatcaacgcctaatttattta 7110432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 24 - 176
Target Start/End: Original strand, 51693201 - 51693353
Alignment:
Q  24 ataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttgg 123  Q
    ||||||||||| |||||||||||||||| |||||| ||||||||||||||||||||| ||||||||||||||||||| ||||       || ||||||||    
T  51693201 ataagtcttaactttctcaaacacgtcctttaacttatttcttttattcaatttggttcaattttgataattttaataccctaaaaaaagagaccgttgg 51693300  T
Q  124 attacgaaggtctatcagattttatagtgtatcatcaacacctaatttattta 176  Q
    |||||| ||||||||| ||||||||||||||||| ||||||||||||||||||    
T  51693301 attacggaggtctatcggattttatagtgtatcaccaacacctaatttattta 51693353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 24 - 175
Target Start/End: Complemental strand, 5488931 - 5488780
Alignment:
Q  24 ataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttgg 123  Q
    ||||||||||| |||||||||||||| | |||||| |||||||||||||||||||||||||||||||||||||||||||| |       || ||||||||    
T  5488931 ataagtcttaactttctcaaacacgttcattaacttatttcttttattcaatttggtccaattttgataattttaatcccttagaaaaagagaccgttgg 5488832  T
Q  124 attacgaaggtctatcagattttatagtgtatcatcaacacctaatttattt 175  Q
    |||||| |||||||||| |||||||||||||||| |||||||||||||||||    
T  5488831 attacggaggtctatcaaattttatagtgtatcaccaacacctaatttattt 5488780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 24 - 171
Target Start/End: Complemental strand, 50485060 - 50484913
Alignment:
Q  24 ataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttgg 123  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||       || ||| ||||    
T  50485060 ataagtcttaactttctcaaacacgtcccttaacttatttcttttattcaatttggtccaattttgataattttaatcccctaaaaaaagagaccattgg 50484961  T
Q  124 attacgaaggtctatcagattttatagtgtatcatcaacacctaattt 171  Q
    |||||  ||||||||||||||||| ||||||||| |||||||||||||    
T  50484960 attacataggtctatcagattttacagtgtatcaccaacacctaattt 50484913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 24 - 176
Target Start/End: Original strand, 17244229 - 17244381
Alignment:
Q  24 ataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttgg 123  Q
    |||||||| || ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| |||       || ||||||||    
T  17244229 ataagtctcaactttctcaaacacgtcccttaacttatttctttgattcaatttggtccaattttgataattttaatctcctaaaaaaagagaccgttgg 17244328  T
Q  124 attacgaaggtctatcagattttatagtgtatcatcaacacctaatttattta 176  Q
    |||||| ||||||||||||||||||| ||||||| | | ||||||||||||||    
T  17244329 attacggaggtctatcagattttataatgtatcaccgatacctaatttattta 17244381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 24 - 168
Target Start/End: Original strand, 18819316 - 18819460
Alignment:
Q  24 ataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttgg 123  Q
    ||||||||||| |||||||| |||||||||||| | |||||||||||||||||||| |||||||| ||||||||||||||||       |||||||||||    
T  18819316 ataagtcttaactttctcaatcacgtcccttaatttatttcttttattcaatttggcccaattttaataattttaatcccctatgaaaagaaaccgttgg 18819415  T
Q  124 attacgaaggtctatcagattttatagtgtatcatcaacacctaa 168  Q
    |||||| |||| |||||||||||||||||||||| ||||||||||    
T  18819416 attacggaggtatatcagattttatagtgtatcaccaacacctaa 18819460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 24 - 176
Target Start/End: Original strand, 51468393 - 51468545
Alignment:
Q  24 ataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttgg 123  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||        | |  | |||    
T  51468393 ataagtcttaactttctcaaacacgtcccttaacttatttcttttattcaatttggtccaattttaataattttaatcccctaaaaaaaaagattgatgg 51468492  T
Q  124 attacgaaggtctatcagattttatagtgtatcatcaacacctaatttattta 176  Q
    |||||| ||||||||||||||||||||||||||| ||||||| ||||||||||    
T  51468493 attacggaggtctatcagattttatagtgtatcaccaacacccaatttattta 51468545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 24 - 171
Target Start/End: Original strand, 5488555 - 5488702
Alignment:
Q  24 ataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttgg 123  Q
    ||||| ||||| |||||||||||||||| |||||| ||||||||||||||||||| |||||||||||||||||||||||| |       || ||||||||    
T  5488555 ataagacttaactttctcaaacacgtcctttaacttatttcttttattcaatttgatccaattttgataattttaatcccttagaaaaagagaccgttgg 5488654  T
Q  124 attacgaaggtctatcagattttatagtgtatcatcaacacctaattt 171  Q
    |||||| ||||||||||||||||||||||||||| |||||| ||||||    
T  5488655 attacggaggtctatcagattttatagtgtatcaccaacacgtaattt 5488702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 51 - 176
Target Start/End: Complemental strand, 52761633 - 52761508
Alignment:
Q  51 ccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttggattacgaaggtctatcagattttatag 150  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||       || ||||||||||| || ||||||||||||||||||||    
T  52761633 ccttaacttatttcttttattcaatttggtccaattttgataattttaatcccctgaaaaaagagaccgttggattgcggaggtctatcagattttatag 52761534  T
Q  151 tgtatcatcaacacctaatttattta 176  Q
    ||||||| ||||||||||||||||||    
T  52761533 tgtatcaccaacacctaatttattta 52761508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 20 - 176
Target Start/End: Complemental strand, 38235217 - 38235062
Alignment:
Q  20 tcatataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccg 119  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||||||||| |||||||||||||||| |||| |||||| |||         ||||||    
T  38235217 tcatataagtcttaactttctcaaacacgtcccttaacttatttcttttattaaatttggtccaattttaataagtttaat-cccaaaaaaaacaaaccg 38235119  T
Q  120 ttggattacgaaggtctatcagattttatagtgtatcatcaacacctaatttattta 176  Q
    |||||||||||| |||||| |||||||| ||||||||| ||||||||||||||||||    
T  38235118 ttggattacgaatgtctataagattttacagtgtatcaccaacacctaatttattta 38235062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 24 - 176
Target Start/End: Original strand, 52086681 - 52086831
Alignment:
Q  24 ataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttgg 123  Q
    |||||| |||| ||||||||||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||||        ||||||||||    
T  52086681 ataagttttaactttctcaaacacgtcccttaacttatttcttttattcaatttagtccaattttaataattttaatcccctaaaaaa--aaaccgttgg 52086778  T
Q  124 attacgaaggtctatcagattttatagtgtatcatcaacacctaatttattta 176  Q
    ||||||||||||||| | |||||||||||||||| || |||||||||| ||||    
T  52086779 attacgaaggtctataaaattttatagtgtatcaccatcacctaattttttta 52086831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 24 - 176
Target Start/End: Complemental strand, 45229667 - 45229515
Alignment:
Q  24 ataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttgg 123  Q
    |||| |||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||  |        | |  |||||    
T  45229667 ataaatcttaattttctcaaacacgtcccttaacttatttcttttattcaatttgatccaattttgataattttaatcctataaaaaaaaagattgttgg 45229568  T
Q  124 attacgaaggtctatcagattttatagtgtatcatcaacacctaatttattta 176  Q
    |||||| ||||||||||||||||||| || |||| ||||||||||||||||||    
T  45229567 attacggaggtctatcagattttataatggatcaccaacacctaatttattta 45229515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 24 - 168
Target Start/End: Original strand, 40187657 - 40187800
Alignment:
Q  24 ataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttgg 123  Q
    ||||||||||| ||| ||||||| |||| |||||| |||||||||| |||||||||||||||||| ||||||||||||||||       || ||||||||    
T  40187657 ataagtcttaactttatcaaacatgtcc-ttaacttatttcttttactcaatttggtccaatttttataattttaatcccctaaaaaaagagaccgttgg 40187755  T
Q  124 attacgaaggtctatcagattttatagtgtatcatcaacacctaa 168  Q
    |||||| |||||||||||||||||| |||||||| ||||||||||    
T  40187756 attacggaggtctatcagattttatcgtgtatcaccaacacctaa 40187800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 24 - 176
Target Start/End: Original strand, 52759417 - 52759569
Alignment:
Q  24 ataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttgg 123  Q
    ||||||||||| ||||||||| |||||| |||||| || | ||||||||||||| ||||||||||||||||||||||| | |       || |||||||     
T  52759417 ataagtcttaactttctcaaaaacgtccattaacttatctattttattcaatttagtccaattttgataattttaatctcttaaaaaatgagaccgttga 52759516  T
Q  124 attacgaaggtctatcagattttatagtgtatcatcaacacctaatttattta 176  Q
    |||||  ||||||||||||||||||||||||||| ||||||||||||||||||    
T  52759517 attacagaggtctatcagattttatagtgtatcaccaacacctaatttattta 52759569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 24 - 176
Target Start/End: Complemental strand, 51468965 - 51468813
Alignment:
Q  24 ataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttgg 123  Q
    |||| |||||| ||| |||||||||||||| |||| ||||||| ||||||||||||||||||||| ||||||||||||||||        ||| | ||||    
T  51468965 ataaatcttaactttttcaaacacgtccctaaacttatttcttctattcaatttggtccaattttaataattttaatcccctaaaaaaaaaaagcattgg 51468866  T
Q  124 attacgaaggtctatcagattttatagtgtatcatcaacacctaatttattta 176  Q
    |||||| || ||||| |||||||| ||||||||| ||||||||||||||||||    
T  51468865 attacggagatctattagattttacagtgtatcaccaacacctaatttattta 51468813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 38 - 169
Target Start/End: Complemental strand, 1823345 - 1823215
Alignment:
Q  38 tctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttggattacgaaggtcta 137  Q
    ||||||||| ||| ||||||| |||| |||||||||||||| ||||||||||||||||||||||  ||        ||||||||||||||||||||||||    
T  1823345 tctcaaacatgtcgcttaacttattt-ttttattcaatttgatccaattttgataattttaatcttctaaaaagataaaccgttggattacgaaggtcta 1823247  T
Q  138 tcagattttatagtgtatcatcaacacctaat 169  Q
    |||||||||||||||||||| |||||||||||    
T  1823246 tcagattttatagtgtatcaccaacacctaat 1823215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 31 - 175
Target Start/End: Original strand, 1821969 - 1822114
Alignment:
Q  31 ttaattttctcaaacacgtcccttaactgatttctttt-attcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttggattacg 129  Q
    |||| ||||||||||||||||||||||| |||| |||| ||| ||||| ||| ||||||||||||||||||||  |       || |||||||| |||||    
T  1821969 ttaactttctcaaacacgtcccttaacttatttttttttatttaatttagtctaattttgataattttaatcctttaaaaaaagagaccgttgggttacg 1822068  T
Q  130 aaggtctatcagattttatagtgtatcatcaacacctaatttattt 175  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||    
T  1822069 aaggtctatctgattttatagtgtatcattaacacctaatttattt 1822114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 40 - 176
Target Start/End: Original strand, 45228345 - 45228481
Alignment:
Q  40 tcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttggattacgaaggtctatc 139  Q
    |||||||||| | |||||| ||||||||||||||||||||||||||||| ||||||||||||||||       || |||||||||||||| || ||||||    
T  45228345 tcaaacacgttctttaacttatttcttttattcaatttggtccaattttaataattttaatcccctaaaaaaagagaccgttggattacggagatctatc 45228444  T
Q  140 agattttatagtgtatcatcaacacctaatttattta 176  Q
    | ||||||||||||||||  ||| | |||||||||||    
T  45228445 aaattttatagtgtatcacaaacgcttaatttattta 45228481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 28 - 176
Target Start/End: Complemental strand, 52087834 - 52087686
Alignment:
Q  28 gtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttggatta 127  Q
    ||||||| |||||||||||||||| || ||| ||||||||||||||||||| | ||||||||||||||||| ||||||       || ||||||| ||||    
T  52087834 gtcttaactttctcaaacacgtcctttcacttatttcttttattcaatttgattcaattttgataattttagtcccctaaaaaaagagaccgttgaatta 52087735  T
Q  128 cgaaggtctatcagattttatagtgtatcatcaacacctaatttattta 176  Q
    || |||||||||| ||||||  |||||||| ||||| ||||||||||||    
T  52087734 cggaggtctatcaaattttacggtgtatcaccaacatctaatttattta 52087686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 236 - 311
Target Start/End: Original strand, 7110492 - 7110567
Alignment:
Q  236 aaaaaaccaagattcaattccaaatcacactcttccaattccattctctagattcatcatcaattctcatctctgc 311  Q
    |||||||||||||| ||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  7110492 aaaaaaccaagatttaattccaaatcacactctttcaattctattctctagattcatcatcaattctcatctctgc 7110567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 116 - 176
Target Start/End: Original strand, 21203157 - 21203217
Alignment:
Q  116 accgttggattacgaaggtctatcagattttatagtgtatcatcaacacctaatttattta 176  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  21203157 accgttggattacaaaggtctatcagattttatagtgtatcatcaacacctaatttattta 21203217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 24 - 176
Target Start/End: Original strand, 50483564 - 50483716
Alignment:
Q  24 ataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccct-nnnnnnngaaaccgttg 122  Q
    ||||||||||||||||| ||| |||||  |||| | ||||||||||||||||||||||||||||| ||||||||| ||||||        || || ||||    
T  50483564 ataagtcttaattttcttaaaaacgtcatttaatttatttcttttattcaatttggtccaatttttataattttactcccctaaaaaaaagagactgttg 50483663  T
Q  123 gattacgaaggtctatcagattttatagtgtatcatcaacacctaatttattta 176  Q
    ||||||| | ||||| |||||||||| |||||| | ||||||||||||||||||    
T  50483664 gattacggaagtcta-cagattttatcgtgtataaccaacacctaatttattta 50483716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 24 - 102
Target Start/End: Complemental strand, 17245728 - 17245651
Alignment:
Q  24 ataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcc 102  Q
    ||||||||||| | ||||||||| ||||||||||| |||| ||||||| ||||||||||||||||||| ||||||||||    
T  17245728 ataagtcttaactctctcaaacaagtcccttaacttattt-ttttattaaatttggtccaattttgatcattttaatcc 17245651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 247 - 308
Target Start/End: Complemental strand, 36809077 - 36809016
Alignment:
Q  247 attcaattccaaatcacactcttccaattccattctctagattcatcatcaattctcatctc 308  Q
    |||||||||||||||||||||||||||||||| |||| | ||||| |||||||| |||||||    
T  36809077 attcaattccaaatcacactcttccaattccaatctccaaattcaacatcaattttcatctc 36809016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 24 - 101
Target Start/End: Original strand, 47533011 - 47533088
Alignment:
Q  24 ataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatc 101  Q
    |||| |||||| ||| |||||||||| |||||| | ||||| ||||||||||||| | ||||||||||||||||||||    
T  47533011 ataaatcttaactttatcaaacacgttccttaaattatttcatttattcaatttgattcaattttgataattttaatc 47533088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 24 - 176
Target Start/End: Complemental strand, 47533918 - 47533766
Alignment:
Q  24 ataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttgg 123  Q
    |||||| |||| ||| ||||| ||||| ||||| | ||||| || |||||||||| | |||||||||||||| |||||| |         | ||||||      
T  47533918 ataagttttaactttttcaaatacgtctcttaaattatttcattcattcaatttgattcaattttgataattataatcctccaaaaaaatagaccgttaa 47533819  T
Q  124 attacgaaggtctatcagattttatagtgtatcatcaacacctaatttattta 176  Q
    ||||   || |||||||||||||||||||||||| ||||||||||||||||||    
T  47533818 attagagagatctatcagattttatagtgtatcaccaacacctaatttattta 47533766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 65
Target Start/End: Original strand, 25181554 - 25181596
Alignment:
Q  23 tataagtcttaattttctcaaacacgtcccttaactgatttct 65  Q
    |||||||||||| ||||||||||||||||||||||| ||||||    
T  25181554 tataagtcttaactttctcaaacacgtcccttaacttatttct 25181596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 82
Target Start/End: Original strand, 25181519 - 25181553
Alignment:
Q  48 gtcccttaactgatttcttttattcaatttggtcc 82  Q
    ||||||||||| |||||||||||||||||||||||    
T  25181519 gtcccttaacttatttcttttattcaatttggtcc 25181553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 82
Target Start/End: Original strand, 51693165 - 51693199
Alignment:
Q  48 gtcccttaactgatttcttttattcaatttggtcc 82  Q
    ||||||||||| |||||||||||||||||||||||    
T  51693165 gtcccttaacttatttcttttattcaatttggtcc 51693199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 82
Target Start/End: Original strand, 52086645 - 52086679
Alignment:
Q  48 gtcccttaactgatttcttttattcaatttggtcc 82  Q
    ||||||||||| |||||||||||||||||||||||    
T  52086645 gtcccttaacttatttcttttattcaatttggtcc 52086679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 81
Target Start/End: Complemental strand, 18820856 - 18820823
Alignment:
Q  48 gtcccttaactgatttcttttattcaatttggtc 81  Q
    ||||||||||| ||||||||||||||||||||||    
T  18820856 gtcccttaacttatttcttttattcaatttggtc 18820823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 113; Significance: 3e-57; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 23 - 176
Target Start/End: Original strand, 19228891 - 19229044
Alignment:
Q  23 tataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttg 122  Q
    |||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||       || |||||||    
T  19228891 tataagtcttaactttctcaaacacgttccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctaaaaaaagagaccgttg 19228990  T
Q  123 gattacgaaggtctatcagattttatagtgtatcatcaacacctaatttattta 176  Q
    ||||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  19228991 gattacggaggtctattagattttatagtgtatcatcaacacctaatttattta 19229044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 23 - 176
Target Start/End: Complemental strand, 19230138 - 19229985
Alignment:
Q  23 tataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttg 122  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       || |||||||    
T  19230138 tataagtcttaactttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctcaaaaaagagaccgttg 19230039  T
Q  123 gattacgaaggtctatcagattttatagtgtatcatcaacacctaatttattta 176  Q
    ||||||| |||||||||| ||||||||||||||||||||||| |||||||||||    
T  19230038 gattacggaggtctatcaaattttatagtgtatcatcaacacttaatttattta 19229985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 24 - 168
Target Start/End: Complemental strand, 9083360 - 9083216
Alignment:
Q  24 ataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttgg 123  Q
    ||||||||||| |||||||||||||||||||||||  ||| |||||||||||||||||||||||||||||||||||||||||       || ||||||||    
T  9083360 ataagtcttaactttctcaaacacgtcccttaacttttttattttattcaatttggtccaattttgataattttaatcccctaaaaaaggagaccgttgg 9083261  T
Q  124 attacgaaggtctatcagattttatagtgtatcatcaacacctaa 168  Q
    ||||||||||||||| |||||||||||||||||| ||||||||||    
T  9083260 attacgaaggtctataagattttatagtgtatcaccaacacctaa 9083216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 24 - 176
Target Start/End: Original strand, 12372368 - 12372520
Alignment:
Q  24 ataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttgg 123  Q
    ||||||||||| ||||||||||||||| ||||||| |||| |||||||||||||| ||||||||||||||||||||| ||||        | ||||||||    
T  12372368 ataagtcttaactttctcaaacacgtctcttaacttatttgttttattcaatttgatccaattttgataattttaataccctaaaaaaacataccgttgg 12372467  T
Q  124 attacgaaggtctatcagattttatagtgtatcatcaacacctaatttattta 176  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  12372468 attacgaaggtctatcagattttatagtgtatcaccaacacctaatttattta 12372520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 24 - 172
Target Start/End: Original strand, 9082033 - 9082181
Alignment:
Q  24 ataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttgg 123  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||       || ||||||||    
T  9082033 ataagtcttaactttctcaaacacgtcccttaacttatttcttttattcaatttggtccaattttgataattttaatcccctagaaaatgagaccgttgg 9082132  T
Q  124 attacgaaggtctatcagattttatagtgtatcatcaacacctaattta 172  Q
    || ||| | ||||||||||||||||||| ||||   |||||||||||||    
T  9082133 atcacggatgtctatcagattttatagtatatcgctaacacctaattta 9082181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 24 - 176
Target Start/End: Complemental strand, 13278295 - 13278143
Alignment:
Q  24 ataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttgg 123  Q
    ||||||||||| ||||||||||||||||||||||| |||| |||  ||||||||| |||||||||||||||||||||||| |       || ||||||||    
T  13278295 ataagtcttaactttctcaaacacgtcccttaacttatttttttacttcaatttgatccaattttgataattttaatcccatagaaaaagagaccgttgg 13278196  T
Q  124 attacgaaggtctatcagattttatagtgtatcatcaacacctaatttattta 176  Q
    |||| | ||||||||||||||||||||||||||| ||||||||||||||||||    
T  13278195 attagggaggtctatcagattttatagtgtatcaccaacacctaatttattta 13278143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 24 - 171
Target Start/End: Complemental strand, 39350709 - 39350562
Alignment:
Q  24 ataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttgg 123  Q
    ||||||||||| ||||||||||||||||||||||| |||||||||| | |||||||||||||||| ||||||||||||| ||       || ||||||||    
T  39350709 ataagtcttaactttctcaaacacgtcccttaacttatttcttttacttaatttggtccaatttttataattttaatcctctaaaaaaagagaccgttgg 39350610  T
Q  124 attacgaaggtctatcagattttatagtgtatcatcaacacctaattt 171  Q
    |||||| ||||||||||||||||| ||||||||| |||||||||||||    
T  39350609 attacggaggtctatcagattttacagtgtatcaccaacacctaattt 39350562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 24 - 173
Target Start/End: Original strand, 18654350 - 18654500
Alignment:
Q  24 ataagtcttaattttctcaaacacgtcccttaactgatttcttttatt-caatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttg 122  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||||||  ||||||||||||||||||| ||||||||||| |       || |||||||    
T  18654350 ataagtcttaactttctcaaacacgtcccttaacttatttcttttattaaaatttggtccaattttgatcattttaatcccattaaaaaagagaccgttg 18654449  T
Q  123 gattacgaaggtctatcagattttatagtgtatcatcaacacctaatttat 173  Q
    ||||||| ||||||||||||||||| ||||||||| |||||||||||||||    
T  18654450 gattacggaggtctatcagattttacagtgtatcaccaacacctaatttat 18654500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 24 - 174
Target Start/End: Complemental strand, 18655716 - 18655566
Alignment:
Q  24 ataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttgg 123  Q
    ||||||||||| ||||||||||||||||||||| | ||||||||||||||||||||||||| ||||||||||||||||||||       || |||||||     
T  18655716 ataagtcttaactttctcaaacacgtcccttaatttatttcttttattcaatttggtccaactttgataattttaatcccctaaaaaaagagaccgttga 18655617  T
Q  124 attacgaaggtctatcagattttatagtgtatcatcaacacctaatttatt 174  Q
    |||||||| |||||||||||||||  |||||||| |||||  |||||||||    
T  18655616 attacgaaagtctatcagattttacggtgtatcaccaacaattaatttatt 18655566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 24 - 176
Target Start/End: Complemental strand, 6803688 - 6803537
Alignment:
Q  24 ataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttgg 123  Q
    ||||||||||||||||||||||| ||  ||||||| |||||||||||||||||||||||||||||||||||||||||||  |        | |||||| |    
T  6803688 ataagtcttaattttctcaaacatgtttcttaacttatttcttttattcaatttggtccaattttgataattttaatcctttaaaaaaacagaccgttag 6803589  T
Q  124 attacgaaggtctatcagattttatagtgtatcatcaacacctaatttattta 176  Q
    ||||| || ||||||||||||||||||||||||| ||||| ||||||||||||    
T  6803588 attac-aaagtctatcagattttatagtgtatcaccaacatctaatttattta 6803537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 236 - 311
Target Start/End: Original strand, 19229104 - 19229179
Alignment:
Q  236 aaaaaaccaagattcaattccaaatcacactcttccaattccattctctagattcatcatcaattctcatctctgc 311  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  19229104 aaaaaaccaagattcaattccaaatcacactcttccaattccattatctagattcatcatcaattctcatctctgc 19229179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 24 - 176
Target Start/End: Original strand, 39164110 - 39164260
Alignment:
Q  24 ataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttgg 123  Q
    ||||||||||| ||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||| ||||        | || ||||     
T  39164110 ataagtcttaactttatcaaacacgtcccttaacttatttcttttattcaatttggtccaattttgat-attttaat-cccttaaaaaaaagactgttga 39164207  T
Q  124 attacgaaggtctatcagattttatagtgtatcatcaacacctaatttattta 176  Q
    |||||| ||| |||||| |||||||||||||||| ||||||||||||||||||    
T  39164208 attacggaggcctatcaaattttatagtgtatcaccaacacctaatttattta 39164260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 24 - 176
Target Start/End: Original strand, 39349534 - 39349686
Alignment:
Q  24 ataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttgg 123  Q
    |||| |||||| |||||||||||||||| |||||| |||||||||| |||||||||| ||||||| ||||||||||||||||       |  |||||| |    
T  39349534 ataactcttaactttctcaaacacgtcctttaacttatttcttttactcaatttggttcaatttttataattttaatcccctaaaaaaagtgaccgtttg 39349633  T
Q  124 attacgaaggtctatcagattttatagtgtatcatcaacacctaatttattta 176  Q
    |||||| |||||||| ||||||||| ||| |||| ||||||||||||||||||    
T  39349634 attacggaggtctattagattttatcgtggatcaccaacacctaatttattta 39349686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 24 - 176
Target Start/End: Complemental strand, 12373785 - 12373629
Alignment:
Q  24 ataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaa----accg 119  Q
    ||||||||||| ||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||            ||    ||||    
T  12373785 ataagtcttaactttctcaaacacgtcccttaacttatttattttattcaatttggtccaattttgataattttaatcaaaaaaaaaaaaaaacagaccg 12373686  T
Q  120 ttggattacgaaggtctatcagattttatagtgtatcatcaacacctaatttattta 176  Q
    |||||||||||| ||||||||||||||| | ||||||| ||||||||||||||||||    
T  12373685 ttggattacgaatgtctatcagattttacactgtatcaccaacacctaatttattta 12373629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 23 - 103
Target Start/End: Original strand, 13276872 - 13276952
Alignment:
Q  23 tataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatccc 103  Q
    ||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||    
T  13276872 tataaatcttaattttctcaaacacgtcccttaacttatttcttttattcaatttggtcaaattttgataattttaatccc 13276952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 52 - 173
Target Start/End: Original strand, 4031903 - 4032024
Alignment:
Q  52 cttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttggattacgaaggtctatcagattttatagt 151  Q
    ||||||| |||||||||||||||||| |||||||||||||||||||||||| ||       || ||||||| |||||| | ||||| |||||||||||||    
T  4031903 cttaacttatttcttttattcaatttagtccaattttgataattttaatccactaaaaaaagagaccgttgaattacggaagtctaccagattttatagt 4032002  T
Q  152 gtatcatcaacacctaatttat 173  Q
    |||||| |||||||||||||||    
T  4032003 gtatcaccaacacctaatttat 4032024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 53 - 176
Target Start/End: Complemental strand, 4033060 - 4032937
Alignment:
Q  53 ttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttggattacgaaggtctatcagattttatagtg 152  Q
    |||||| |||| ||||||| || ||||||||||||| ||||||||||||| ||       || |||||||||||||| ||||||||||||||||||| ||    
T  4033060 ttaacttattttttttatttaacttggtccaattttaataattttaatccactaaaaaaagagaccgttggattacggaggtctatcagattttataatg 4032961  T
Q  153 tatcatcaacacctaatttattta 176  Q
    |||||| |||||||| ||||||||    
T  4032960 tatcattaacacctagtttattta 4032937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 24 - 71
Target Start/End: Original strand, 6802028 - 6802075
Alignment:
Q  24 ataagtcttaattttctcaaacacgtcccttaactgatttcttttatt 71  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||    
T  6802028 ataagtcttaattttctcaaacacgtcccttaacttatttcttttatt 6802075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 24 - 78
Target Start/End: Original strand, 8447131 - 8447185
Alignment:
Q  24 ataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttg 78  Q
    |||||| |||| ||||||||||||||||||||||| |||||||||||||||||||    
T  8447131 ataagttttaactttctcaaacacgtcccttaacttatttcttttattcaatttg 8447185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 236 - 301
Target Start/End: Original strand, 13277074 - 13277139
Alignment:
Q  236 aaaaaaccaagattcaattccaaatcacactcttccaattccattctctagattcatcatcaattc 301  Q
    |||||| | |||||||||||||||||| ||||||||||||||| |||  |||||||||||||||||    
T  13277074 aaaaaatccagattcaattccaaatcagactcttccaattccaatctacagattcatcatcaattc 13277139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 173
Target Start/End: Complemental strand, 39051635 - 39051591
Alignment:
Q  129 gaaggtctatcagattttatagtgtatcatcaacacctaatttat 173  Q
    ||||||| ||||||| | |||||||||||||||||||||||||||    
T  39051635 gaaggtccatcagatctaatagtgtatcatcaacacctaatttat 39051591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 63 - 105
Target Start/End: Original strand, 6802358 - 6802400
Alignment:
Q  63 tcttttattcaatttggtccaattttgataattttaatcccct 105  Q
    ||||||||| |||| |||||||||||||||| |||||||||||    
T  6802358 tcttttatttaattcggtccaattttgataagtttaatcccct 6802400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 82
Target Start/End: Original strand, 8447095 - 8447129
Alignment:
Q  48 gtcccttaactgatttcttttattcaatttggtcc 82  Q
    ||||||||||| |||||||||||||||||||||||    
T  8447095 gtcccttaacttatttcttttattcaatttggtcc 8447129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 82
Target Start/End: Original strand, 13276837 - 13276871
Alignment:
Q  48 gtcccttaactgatttcttttattcaatttggtcc 82  Q
    ||||||||||| |||||||||||||||||||||||    
T  13276837 gtcccttaacttatttcttttattcaatttggtcc 13276871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 173
Target Start/End: Complemental strand, 38603725 - 38603668
Alignment:
Q  116 accgttggattacgaaggtctatcagattttatagtgtatcatcaacacctaatttat 173  Q
    |||||||||| | ||||||| ||||||| | ||||||||||| |||||||| ||||||    
T  38603725 accgttggataaagaaggtccatcagatctaatagtgtatcaccaacacctcatttat 38603668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 102; Significance: 1e-50; HSPs: 53)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 19 - 173
Target Start/End: Complemental strand, 13750705 - 13750551
Alignment:
Q  19 atcatataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaacc 118  Q
    |||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||        | |||    
T  13750705 atcacataagtcttaactttctcaaacacgtcccttaacttatttcttttattcaatttggtccaattttgataattttaatcccctaaaaaaacagacc 13750606  T
Q  119 gttggattacgaaggtctatcagattttatagtgtatcatcaacacctaatttat 173  Q
    |||||||||||||||||||| ||||||||||||||||||||| || |||||||||    
T  13750605 gttggattacgaaggtctattagattttatagtgtatcatcatcaactaatttat 13750551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 23 - 176
Target Start/End: Original strand, 9391572 - 9391725
Alignment:
Q  23 tataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttg 122  Q
    ||||| |||||||||||||||||||||||||| ||| ||||||||||||||||||||| |||||||||||||||||||||  |       || |||||||    
T  9391572 tataaatcttaattttctcaaacacgtcccttcacttatttcttttattcaatttggtacaattttgataattttaatcctttaaaaaaagagaccgttg 9391671  T
Q  123 gattacgaaggtctatcagattttatagtgtatcatcaacacctaatttattta 176  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  9391672 gattacgaaggtctatcagattttatagtgtatcatcaacaccaaatttattta 9391725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 24 - 175
Target Start/End: Original strand, 43113728 - 43113879
Alignment:
Q  24 ataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttgg 123  Q
    |||||| |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||       || ||||||||    
T  43113728 ataagttttaactttctcaaacacgtcccttaacttatttcttttattcaatttggtccaattttgataattttaatcccctaaaaaaagagaccgttgg 43113827  T
Q  124 attacgaaggtctatcagattttatagtgtatcatcaacacctaatttattt 175  Q
    |||||  ||||||||||||||||||||||||||| || ||||||||||||||    
T  43113828 attacagaggtctatcagattttatagtgtatcaccagcacctaatttattt 43113879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 23 - 176
Target Start/End: Complemental strand, 9392880 - 9392727
Alignment:
Q  23 tataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttg 122  Q
    |||||||||||| ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||       || |||||||    
T  9392880 tataagtcttaactttctcaaacatgtcccttaacttatttcttttattcaatttggtccaattttgataattttaatcccctagaaaaagagaccgttg 9392781  T
Q  123 gattacgaaggtctatcagattttatagtgtatcatcaacacctaatttattta 176  Q
    ||||||  ||||||||||||||||||||||||||| |  |||||||||||||||    
T  9392780 gattacagaggtctatcagattttatagtgtatcaccggcacctaatttattta 9392727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 23 - 176
Target Start/End: Complemental strand, 18788625 - 18788472
Alignment:
Q  23 tataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttg 122  Q
    ||||| |||||| ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||        | |||||||    
T  18788625 tataaatcttaactttctcaaacatgtcccttaacttatttcttttattcaatttggtccaattttgataattttaatcctctaaaaaaatagaccgttg 18788526  T
Q  123 gattacgaaggtctatcagattttatagtgtatcatcaacacctaatttattta 176  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||    
T  18788525 gattacgaaggtctatcagattttataatgtatcaccaacacctaatttattta 18788472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 24 - 176
Target Start/End: Original strand, 19217681 - 19217833
Alignment:
Q  24 ataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttgg 123  Q
    ||||||||||| |||||||||||||||| |||||| ||||||||||||||||||||| ||||||||||||||||||| ||||       || ||||||||    
T  19217681 ataagtcttaactttctcaaacacgtccattaacttatttcttttattcaatttggtacaattttgataattttaataccctaaaaaaagagaccgttgg 19217780  T
Q  124 attacgaaggtctatcagattttatagtgtatcatcaacacctaatttattta 176  Q
    |||||| ||||||||| ||||||||||||||||| ||||||||||||||||||    
T  19217781 attacggaggtctatcggattttatagtgtatcaccaacacctaatttattta 19217833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 24 - 176
Target Start/End: Complemental strand, 44420586 - 44420435
Alignment:
Q  24 ataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttgg 123  Q
    ||||||||||| ||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||| ||||       || ||||||||    
T  44420586 ataagtcttaactttctcaaacacgtcccttaacttatttcttttattcaatttagtccaattttgataattttaatgccctaaaaaaagataccgttgg 44420487  T
Q  124 attacgaaggtctatcagattttatagtgtatcatcaacacctaatttattta 176  Q
    ||||||||||||||||||| |||||||||||||| ||||| ||||||||||||    
T  44420486 attacgaaggtctatcaga-tttatagtgtatcaccaacatctaatttattta 44420435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 24 - 178
Target Start/End: Original strand, 29186718 - 29186872
Alignment:
Q  24 ataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttgg 123  Q
    |||||| |||| ||||||||||||||||||||||| |||| |||||||||||||||| |||||||||||||||||||||| |       || ||||| ||    
T  29186718 ataagttttaactttctcaaacacgtcccttaacttatttattttattcaatttggttcaattttgataattttaatcccttaaaaaatgagaccgtagg 29186817  T
Q  124 attacgaaggtctatcagattttatagtgtatcatcaacacctaatttatttatt 178  Q
    |||||| ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  29186818 attacggaggtctatcagattttatagtgtatcaccaacacctaatttatttatt 29186872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 23 - 175
Target Start/End: Original strand, 44746779 - 44746931
Alignment:
Q  23 tataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttg 122  Q
    |||||||||||||||||||||||| || | |||||| |||||||||||||||||||||| ||||||||||||||||||||| |       || |||||||    
T  44746779 tataagtcttaattttctcaaacatgttcgttaacttatttcttttattcaatttggtcaaattttgataattttaatcccttagaaaaagagaccgttg 44746878  T
Q  123 gattacgaaggtctatcagattttatagtgtatcatcaacacctaatttattt 175  Q
    ||||||| |||||||||| |||||||||||||| |||||||||||||||||||    
T  44746879 gattacggaggtctatcatattttatagtgtattatcaacacctaatttattt 44746931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 24 - 176
Target Start/End: Complemental strand, 45400074 - 45399922
Alignment:
Q  24 ataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttgg 123  Q
    |||| |||||| |||  |||||||||||||||||| |||||||||||| | |||||||||||||||||||||||||||||||       || ||||||||    
T  45400074 ataactcttaacttttgcaaacacgtcccttaacttatttcttttatttactttggtccaattttgataattttaatcccctaaaaaaagagaccgttgg 45399975  T
Q  124 attacgaaggtctatcagattttatagtgtatcatcaacacctaatttattta 176  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||    
T  45399974 attacgaaggtctatcagattttatagtgtatcactaacacctaatttattta 45399922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 24 - 176
Target Start/End: Complemental strand, 27072718 - 27072566
Alignment:
Q  24 ataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttgg 123  Q
    ||||||||||| ||||||||||| ||||||||||| |||||||||||||||||||||| |||||||||||||||||||| ||        ||||||||||    
T  27072718 ataagtcttaactttctcaaacatgtcccttaacttatttcttttattcaatttggtcaaattttgataattttaatccactaaaaaaaaaaaccgttgg 27072619  T
Q  124 attacgaaggtctatcagattttatagtgtatcatcaacacctaatttattta 176  Q
    |||||  |||||||| |||||||||||| ||||| ||||||||||||||||||    
T  27072618 attacagaggtctataagattttatagtttatcaccaacacctaatttattta 27072566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 24 - 176
Target Start/End: Original strand, 27205595 - 27205747
Alignment:
Q  24 ataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttgg 123  Q
    ||||||||||| ||||||||||| ||||||||||| |||||||||||||||||||||| |||||||||||||||||||| ||        ||||||||||    
T  27205595 ataagtcttaactttctcaaacatgtcccttaacttatttcttttattcaatttggtcaaattttgataattttaatccactaaaaaaaaaaaccgttgg 27205694  T
Q  124 attacgaaggtctatcagattttatagtgtatcatcaacacctaatttattta 176  Q
    |||||  |||||||| |||||||||||| ||||| ||||||||||||||||||    
T  27205695 attacagaggtctataagattttatagtctatcaccaacacctaatttattta 27205747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 24 - 176
Target Start/End: Complemental strand, 29188094 - 29187942
Alignment:
Q  24 ataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttgg 123  Q
    ||||||||||| ||||||||||||||||||||| | |||| ||||||||||||| |||||||||||||||||||||||||||       || ||||||||    
T  29188094 ataagtcttaactttctcaaacacgtcccttaatttatttattttattcaatttagtccaattttgataattttaatcccctaaaaaaagagaccgttgg 29187995  T
Q  124 attacgaaggtctatcagattttatagtgtatcatcaacacctaatttattta 176  Q
    ||| |  |||||||||||||||||||||| |||| ||||||||||||||||||    
T  29187994 attgcagaggtctatcagattttatagtgcatcaccaacacctaatttattta 29187942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 24 - 176
Target Start/End: Original strand, 44417511 - 44417663
Alignment:
Q  24 ataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttgg 123  Q
    |||||||||||  |||||||||||||||||||||| |||| |||| ||||||||||||||||||||||||||||||||||||       || |  |||||    
T  44417511 ataagtcttaacattctcaaacacgtcccttaacttatttattttcttcaatttggtccaattttgataattttaatcccctaaaaaaagagattgttgg 44417610  T
Q  124 attacgaaggtctatcagattttatagtgtatcatcaacacctaatttattta 176  Q
    |||||| ||||||||||||||||||||| ||||| ||||||||||||||||||    
T  44417611 attacggaggtctatcagattttatagtctatcaccaacacctaatttattta 44417663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 24 - 176
Target Start/End: Complemental strand, 48793580 - 48793428
Alignment:
Q  24 ataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttgg 123  Q
    ||||||||||| ||| ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||| |||       || ||||||||    
T  48793580 ataagtcttaactttttcaaacacgtcccttaacttatttcttttattcaatttgatccaattttgataattttaatctcctaaaaaaagagaccgttgg 48793481  T
Q  124 attacgaaggtctatcagattttatagtgtatcatcaacacctaatttattta 176  Q
    ||||| ||||| ||| |||||||||||||||||| ||||||| ||||||||||    
T  48793480 attacaaaggtgtataagattttatagtgtatcaccaacaccaaatttattta 48793428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 48 - 176
Target Start/End: Complemental strand, 44748603 - 44748475
Alignment:
Q  48 gtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttggattacgaaggtctatcagatttta 147  Q
    ||||||||| | |||||||||||||||| |||||||||||||||||||||||||||||       || || |||||||||||||||||||||||||||||    
T  44748603 gtcccttaatttatttcttttattcaatatggtccaattttgataattttaatcccctagaaaaggagactgttggattacgaaggtctatcagatttta 44748504  T
Q  148 tagtgtatcatcaacacctaatttattta 176  Q
    |||||||||| ||||||||||||||||||    
T  44748503 tagtgtatcaccaacacctaatttattta 44748475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 24 - 171
Target Start/End: Original strand, 3537480 - 3537627
Alignment:
Q  24 ataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttgg 123  Q
    |||||| |||| ||||||||||||||||||||||| |||||||||||||||||| ||| |||||| ||||||||||||||||       |||||||||||    
T  3537480 ataagttttaactttctcaaacacgtcccttaacttatttcttttattcaatttagtctaattttaataattttaatcccctaaaaaaagaaaccgttgg 3537579  T
Q  124 attacgaaggtctatcagattttatagtgtatcatcaacacctaattt 171  Q
    ||||||||||||||| | |||||||||| ||||| || ||||||||||    
T  3537580 attacgaaggtctataaaattttatagtatatcaccatcacctaattt 3537627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 37 - 176
Target Start/End: Original strand, 43961000 - 43961139
Alignment:
Q  37 ttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttggattacgaaggtct 136  Q
    |||||||||||||||||||| | ||||||||||||||||||| ||||||||||||||||||||||| ||        | ||||||||||||| |||||||    
T  43961000 ttctcaaacacgtcccttaatttatttcttttattcaatttgatccaattttgataattttaatcctctacaaaaacagaccgttggattacaaaggtct 43961099  T
Q  137 atcagattttatagtgtatcatcaacacctaatttattta 176  Q
    |||||||||||||||||||||  |||||||||||||||||    
T  43961100 atcagattttatagtgtatcactaacacctaatttattta 43961139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 24 - 175
Target Start/End: Complemental strand, 43962633 - 43962482
Alignment:
Q  24 ataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttgg 123  Q
    ||||||||||  ||||||||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||  ||        | ||||||||    
T  43962633 ataagtcttagctttctcaaacatgtcccttaacttatttcttttattcaatttgatccaattttgataattttaatcatctaaaaaaacagaccgttgg 43962534  T
Q  124 attacgaaggtctatcagattttatagtgtatcatcaacacctaatttattt 175  Q
    |||||||||||||||||||||||||||| |||||  ||||||||||||||||    
T  43962533 attacgaaggtctatcagattttatagtatatcactaacacctaatttattt 43962482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 24 - 176
Target Start/End: Original strand, 7011687 - 7011840
Alignment:
Q  24 ataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaa-accgttg 122  Q
    ||||||||||| ||| ||||||| |||||||| || |||||||||||||||||||||||||||||||||||||||||||  |        || |||||||    
T  7011687 ataagtcttaactttatcaaacatgtcccttagcttatttcttttattcaatttggtccaattttgataattttaatccattaaaaaaaaaagaccgttg 7011786  T
Q  123 gattacgaaggtctatcagattttatagtgtatcatcaacacctaatttattta 176  Q
    ||||||| |||||||| |||||||||||||||||| ||||||||||||||||||    
T  7011787 gattacggaggtctataagattttatagtgtatcaccaacacctaatttattta 7011840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 24 - 176
Target Start/End: Original strand, 7027045 - 7027198
Alignment:
Q  24 ataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaa-accgttg 122  Q
    ||||||||||| ||| ||||||| |||||||| || |||||||||||||||||||||||||||||||||||||||||||  |        || |||||||    
T  7027045 ataagtcttaactttatcaaacatgtcccttagcttatttcttttattcaatttggtccaattttgataattttaatccattaaaaaaaaaagaccgttg 7027144  T
Q  123 gattacgaaggtctatcagattttatagtgtatcatcaacacctaatttattta 176  Q
    ||||||| |||||||| |||||||||||||||||| ||||||||||||||||||    
T  7027145 gattacggaggtctataagattttatagtgtatcaccaacacctaatttattta 7027198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 24 - 176
Target Start/End: Original strand, 18787202 - 18787354
Alignment:
Q  24 ataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttgg 123  Q
    |||| |||||| ||| ||||| | ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||        | ||||||||    
T  18787202 ataaatcttaactttttcaaatatgtcccttaacttatttcttttattcaatttggtccaattttgataattttaatcccctaaaaaaatagaccgttgg 18787301  T
Q  124 attacgaaggtctatcagattttatagtgtatcatcaacacctaatttattta 176  Q
    |||||| |||| ||||||||||||| |||||||| |||||| |||||||||||    
T  18787302 attacggaggtttatcagattttatggtgtatcaccaacacttaatttattta 18787354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 24 - 168
Target Start/End: Original strand, 44230481 - 44230625
Alignment:
Q  24 ataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttgg 123  Q
    |||||| |||| |||||||| ||||||| |||||| ||||||||||||||||||||||||||||| ||||||| ||||||||       || ||||||||    
T  44230481 ataagttttaactttctcaatcacgtcctttaacttatttcttttattcaatttggtccaattttaataatttcaatcccctacgaaaagagaccgttgg 44230580  T
Q  124 attacgaaggtctatcagattttatagtgtatcatcaacacctaa 168  Q
    |||||  ||||||||||||||||| ||||||||||||||||||||    
T  44230581 attacagaggtctatcagattttacagtgtatcatcaacacctaa 44230625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 23 - 176
Target Start/End: Original strand, 13597197 - 13597349
Alignment:
Q  23 tataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttg 122  Q
    |||||||||||| |||||||||||||||||| |||| |||||||||||| |||||| | ||||||||||||||||||||| ||       || | |||||    
T  13597197 tataagtcttaactttctcaaacacgtccctgaacttatttcttttattaaatttgat-caattttgataattttaatcctctaaaaaaagatatcgttg 13597295  T
Q  123 gattacgaaggtctatcagattttatagtgtatcatcaacacctaatttattta 176  Q
    ||||| | |||||||| |||||||||||||||||| ||||||||||||||||||    
T  13597296 gattagggaggtctataagattttatagtgtatcaccaacacctaatttattta 13597349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 24 - 176
Target Start/End: Complemental strand, 32519813 - 32519661
Alignment:
Q  24 ataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttgg 123  Q
    |||| |||||| |||||||||||| |||||||| | ||||||||||||||||||||| ||||||| |||||||||||||| |       || |||||||     
T  32519813 ataaatcttaactttctcaaacacatcccttaaattatttcttttattcaatttggttcaattttaataattttaatcccttaaaaaaagagaccgttga 32519714  T
Q  124 attacgaaggtctatcagattttatagtgtatcatcaacacctaatttattta 176  Q
    |||||||||||||| |||||| |||||||| ||| ||||||||||||| ||||    
T  32519713 attacgaaggtctaccagattgtatagtgtgtcaccaacacctaattttttta 32519661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 24 - 176
Target Start/End: Original strand, 48792497 - 48792649
Alignment:
Q  24 ataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttgg 123  Q
    |||||| |||| ||| ||||||| ||||||||||| ||||||||||||||||||| || ||||||||||||||||||| |||       || ||||||||    
T  48792497 ataagttttaactttttcaaacatgtcccttaacttatttcttttattcaatttgatctaattttgataattttaatctcctaaaaaaagagaccgttgg 48792596  T
Q  124 attacgaaggtctatcagattttatagtgtatcatcaacacctaatttattta 176  Q
    ||||| | ||| ||| |||||||||||||||||| ||||||| ||||||||||    
T  48792597 attacaagggtgtataagattttatagtgtatcaccaacaccaaatttattta 48792649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 48 - 173
Target Start/End: Original strand, 26005429 - 26005554
Alignment:
Q  48 gtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttggattacgaaggtctatcagatttta 147  Q
    ||||||||||| ||||||||||||||||||||| ||||||||||||||||| ||| ||       || ||||||||||||| ||||||||| ||||||||    
T  26005429 gtcccttaacttatttcttttattcaatttggttcaattttgataattttactccactaaaaaaagagaccgttggattacaaaggtctataagatttta 26005528  T
Q  148 tagtgtatcatcaacacctaatttat 173  Q
    |||||||||| |||||| ||||||||    
T  26005529 tagtgtatcaccaacacgtaatttat 26005554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 24 - 176
Target Start/End: Complemental strand, 37237289 - 37237140
Alignment:
Q  24 ataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttgg 123  Q
    ||||||||||| | |||||||||| |||||||||| ||||  |||||| |||||||||||||||||||||||| ||||| ||       || | ||||||    
T  37237289 ataagtcttaactctctcaaacacatcccttaacttattt--tttattaaatttggtccaattttgataattt-aatcctctaaaaaaagagatcgttgg 37237193  T
Q  124 attacgaaggtctatcagattttatagtgtatcatcaacacctaatttattta 176  Q
    |||||| ||||||||||||||||||||||||| | ||||||||||||||||||    
T  37237192 attacggaggtctatcagattttatagtgtatgaccaacacctaatttattta 37237140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 26 - 176
Target Start/End: Original strand, 12630619 - 12630770
Alignment:
Q  26 aagtcttaattttctcaaacacgtcccttaac-tgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttgga 124  Q
    |||||||||||||||||||||||||||||||| |  ||| ||||||||||||||||| |||||||||||||||||||||||       || || ||||||    
T  12630619 aagtcttaattttctcaaacacgtcccttaacctttttttttttattcaatttggtctaattttgataattttaatcccctagaaaaagagactgttgga 12630718  T
Q  125 ttacgaaggtctatcagattttatagtgtatcatcaacacctaatttattta 176  Q
    ||||  |||| |||||||||||||  || ||||  |||||||||||||||||    
T  12630719 ttacagaggtatatcagattttattatggatcactaacacctaatttattta 12630770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 24 - 174
Target Start/End: Original strand, 32518475 - 32518616
Alignment:
Q  24 ataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttgg 123  Q
    |||| |||||| ||||||||||||||||||||| | ||||||||||||||||||||| |||||||         ||||||||        | ||||||||    
T  32518475 ataaatcttaactttctcaaacacgtcccttaaattatttcttttattcaatttggttcaatttt---------aatcccctaaaaaaaaagaccgttgg 32518565  T
Q  124 attacgaaggtctatcagattttatagtgtatcatcaacacctaatttatt 174  Q
    |||||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  32518566 attacggaggtctatcagattttatagtgtatcaccaacacctaatttatt 32518616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 51 - 176
Target Start/End: Complemental strand, 43115124 - 43114999
Alignment:
Q  51 ccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttggattacgaaggtctatcagattttatag 150  Q
    |||||||| ||||||||||||||||||| |||||||||||||||||||||||| |        | |||||||||||||  | ||||||||||||||||||    
T  43115124 ccttaacttatttcttttattcaatttgatccaattttgataattttaatcccttaaaaaagaagaccgttggattactgaagtctatcagattttatag 43115025  T
Q  151 tgtatcatcaacacctaatttattta 176  Q
    || |||||||  ||||||||||||||    
T  43115024 tgcatcatcataacctaatttattta 43114999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 53 - 176
Target Start/End: Complemental strand, 13599293 - 13599169
Alignment:
Q  53 ttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaacc-gttggattacgaaggtctatcagattttatagt 151  Q
    |||||| ||||||||||||||||||| |||||||||||||||||||||  | |        |||   ||||||||||| |||||||||||||||||||||    
T  13599293 ttaacttatttcttttattcaatttgctccaattttgataattttaatatcttaaaaaaaaaaaattgttggattacggaggtctatcagattttatagt 13599194  T
Q  152 gtatcatcaacacctaatttattta 176  Q
    ||||||  |||||||||||||||||    
T  13599193 gtatcagtaacacctaatttattta 13599169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 36 - 98
Target Start/End: Original strand, 37235879 - 37235941
Alignment:
Q  36 tttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataatttta 98  Q
    |||||||||| |||||||||||| |||||||| |||||||||||||||||||||| |||||||    
T  37235879 tttctcaaacgcgtcccttaacttatttctttgattcaatttggtccaattttgagaatttta 37235941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 24 - 176
Target Start/End: Complemental strand, 3538627 - 3538485
Alignment:
Q  24 ataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttgg 123  Q
    ||||||||||| |||||||||||||||  || ||| ||||||||||||||||||          ||||||||||| ||||||       || ||||||||    
T  3538627 ataagtcttaactttctcaaacacgtcttttcacttatttcttttattcaattt----------tgataattttagtcccctaaaaaaagagaccgttgg 3538538  T
Q  124 attacgaaggtctatcagattttatagtgtatcatcaacacctaatttattta 176  Q
    |||||| || ||||||| ||||||  |||||||| ||||| ||||||||||||    
T  3538537 attacggagatctatcaaattttacggtgtatcaccaacatctaatttattta 3538485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 48 - 176
Target Start/End: Original strand, 13749081 - 13749208
Alignment:
Q  48 gtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttggattacgaaggtctatcagatttta 147  Q
    ||||| ||||| ||||||| |||| |||||| |  |||||||||||||||||||| ||       || ||||||| |||||| |||||||| | ||||      
T  13749081 gtcccataacttatttcttatatttaatttgatttaattttgataattttaatcctctaaaaaatgagaccgttgaattacgtaggtctataaaatttc- 13749179  T
Q  148 tagtgtatcatcaacacctaatttattta 176  Q
    |||||||||| ||||||||||||||||||    
T  13749180 tagtgtatcaccaacacctaatttattta 13749208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 118 - 176
Target Start/End: Original strand, 42611564 - 42611622
Alignment:
Q  118 cgttggattacgaaggtctatcagattttatagtgtatcatcaacacctaatttattta 176  Q
    |||||||||| |||| |||||||||| ||||||||||||||||| || | |||||||||    
T  42611564 cgttggattaggaagatctatcagatcttatagtgtatcatcaatacttgatttattta 42611622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 130 - 176
Target Start/End: Complemental strand, 44231819 - 44231773
Alignment:
Q  130 aaggtctatcagattttatagtgtatcatcaacacctaatttattta 176  Q
    |||||||| ||||||||||||||||||| |||||||| |||||||||    
T  44231819 aaggtctaccagattttatagtgtatcaccaacacctgatttattta 44231773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 24 - 81
Target Start/End: Original strand, 12630557 - 12630614
Alignment:
Q  24 ataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtc 81  Q
    ||||||||||| ||||||||||| || |||||||| || |||||| ||||||||||||    
T  12630557 ataagtcttaactttctcaaacatgttccttaacttatgtcttttcttcaatttggtc 12630614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 125 - 176
Target Start/End: Original strand, 37235939 - 37235990
Alignment:
Q  125 ttacgaaggtctatcagattttatagtgtatcatcaacacctaatttattta 176  Q
    ||||| ||||| ||||||||||| | ||||||| ||||||||||||||||||    
T  37235939 ttacggaggtcaatcagattttacaatgtatcaccaacacctaatttattta 37235990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 82
Target Start/End: Original strand, 3537444 - 3537478
Alignment:
Q  48 gtcccttaactgatttcttttattcaatttggtcc 82  Q
    ||||||||||| |||||||||||||||||||||||    
T  3537444 gtcccttaacttatttcttttattcaatttggtcc 3537478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 82
Target Start/End: Complemental strand, 7057429 - 7057395
Alignment:
Q  48 gtcccttaactgatttcttttattcaatttggtcc 82  Q
    ||||||||||| |||||||||||||||||||||||    
T  7057429 gtcccttaacttatttcttttattcaatttggtcc 7057395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 82
Target Start/End: Original strand, 9391537 - 9391571
Alignment:
Q  48 gtcccttaactgatttcttttattcaatttggtcc 82  Q
    ||||||||||| |||||||||||||||||||||||    
T  9391537 gtcccttaacttatttcttttattcaatttggtcc 9391571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 82
Target Start/End: Original strand, 19217645 - 19217679
Alignment:
Q  48 gtcccttaactgatttcttttattcaatttggtcc 82  Q
    ||||||||||| |||||||||||||||||||||||    
T  19217645 gtcccttaacttatttcttttattcaatttggtcc 19217679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 82
Target Start/End: Original strand, 29186682 - 29186716
Alignment:
Q  48 gtcccttaactgatttcttttattcaatttggtcc 82  Q
    ||||||||||| |||||||||||||||||||||||    
T  29186682 gtcccttaacttatttcttttattcaatttggtcc 29186716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 82
Target Start/End: Complemental strand, 44231942 - 44231908
Alignment:
Q  48 gtcccttaactgatttcttttattcaatttggtcc 82  Q
    ||||||||||| |||||||||||||||||||||||    
T  44231942 gtcccttaacttatttcttttattcaatttggtcc 44231908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 82
Target Start/End: Original strand, 48792461 - 48792495
Alignment:
Q  48 gtcccttaactgatttcttttattcaatttggtcc 82  Q
    ||||||||||| |||||||||||||||||||||||    
T  48792461 gtcccttaacttatttcttttattcaatttggtcc 48792495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 81
Target Start/End: Complemental strand, 3538663 - 3538630
Alignment:
Q  48 gtcccttaactgatttcttttattcaatttggtc 81  Q
    ||||||||||| ||||||||||||||||||||||    
T  3538663 gtcccttaacttatttcttttattcaatttggtc 3538630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 139 - 176
Target Start/End: Complemental strand, 9357745 - 9357708
Alignment:
Q  139 cagattttatagtgtatcatcaacacctaatttattta 176  Q
    ||||| ||||||||||||| ||||||||||||||||||    
T  9357745 cagatcttatagtgtatcaccaacacctaatttattta 9357708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 81
Target Start/End: Original strand, 43113692 - 43113725
Alignment:
Q  48 gtcccttaactgatttcttttattcaatttggtc 81  Q
    ||||||||||| ||||||||||||||||||||||    
T  43113692 gtcccttaacttatttcttttattcaatttggtc 43113725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 81
Target Start/End: Original strand, 43960963 - 43960996
Alignment:
Q  48 gtcccttaactgatttcttttattcaatttggtc 81  Q
    ||||||||||| ||||||||||||||||||||||    
T  43960963 gtcccttaacttatttcttttattcaatttggtc 43960996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 81
Target Start/End: Complemental strand, 43962669 - 43962636
Alignment:
Q  48 gtcccttaactgatttcttttattcaatttggtc 81  Q
    ||||||||||| ||||||||||||||||||||||    
T  43962669 gtcccttaacttatttcttttattcaatttggtc 43962636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 81
Target Start/End: Original strand, 45688885 - 45688918
Alignment:
Q  48 gtcccttaactgatttcttttattcaatttggtc 81  Q
    ||||||||||| ||||||||||||||||||||||    
T  45688885 gtcccttaacttatttcttttattcaatttggtc 45688918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 48 - 80
Target Start/End: Original strand, 44417475 - 44417507
Alignment:
Q  48 gtcccttaactgatttcttttattcaatttggt 80  Q
    ||||||||||| |||||||||||||||||||||    
T  44417475 gtcccttaacttatttcttttattcaatttggt 44417507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 94; Significance: 7e-46; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 24 - 178
Target Start/End: Original strand, 9244119 - 9244273
Alignment:
Q  24 ataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttgg 123  Q
    |||||| |||| ||||||||||||||||||||||| |||| |||||||||||||||| |||||||||||||||||||||| |       || ||||| ||    
T  9244119 ataagttttaactttctcaaacacgtcccttaacttatttattttattcaatttggttcaattttgataattttaatcccttaaaaaatgagaccgtagg 9244218  T
Q  124 attacgaaggtctatcagattttatagtgtatcatcaacacctaatttatttatt 178  Q
    |||||| ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  9244219 attacggaggtctatcagattttatagtgtatcaccaacacctaatttatttatt 9244273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 20 - 176
Target Start/End: Original strand, 34642715 - 34642870
Alignment:
Q  20 tcatataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccg 119  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||  |||||||||||||||||||||||        ||||||    
T  34642715 tcatataagtcttaactttctcaaacacgtcccttaacttatttcttttattcaatttggtttaattttgataattttaatcccctaaaaaaa-aaaccg 34642813  T
Q  120 ttggattacgaaggtctatcagattttatagtgtatcatcaacacctaatttattta 176  Q
    ||||||| || ||||||||||||||||||||| ||||| ||||| ||||||||||||    
T  34642814 ttggattgcggaggtctatcagattttatagtatatcaccaacatctaatttattta 34642870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 24 - 176
Target Start/End: Complemental strand, 9245495 - 9245343
Alignment:
Q  24 ataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttgg 123  Q
    ||||||||||| ||||||||||||||||||||| | |||| ||||||||||||| |||||||||| ||||||||||||||||       || ||||||||    
T  9245495 ataagtcttaactttctcaaacacgtcccttaatttatttattttattcaatttagtccaatttttataattttaatcccctaaaaaaagagaccgttgg 9245396  T
Q  124 attacgaaggtctatcagattttatagtgtatcatcaacacctaatttattta 176  Q
    ||| |  ||||||||||||||||||||||||||| ||||||||||||||||||    
T  9245395 attgctgaggtctatcagattttatagtgtatcaccaacacctaatttattta 9245343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 24 - 176
Target Start/End: Original strand, 26364795 - 26364947
Alignment:
Q  24 ataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttgg 123  Q
    ||||||||||| |||||||||||| ||| |||||| ||||||||||||||||||| ||||||||||||||||||||||| ||       || ||||||||    
T  26364795 ataagtcttaactttctcaaacacatcctttaacttatttcttttattcaatttgatccaattttgataattttaatcctctaaaaaaagagaccgttgg 26364894  T
Q  124 attacgaaggtctatcagattttatagtgtatcatcaacacctaatttattta 176  Q
    |||||  ||||||||||||||||||| ||||||| ||||||||||||||||||    
T  26364895 attacagaggtctatcagattttataatgtatcaccaacacctaatttattta 26364947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 24 - 176
Target Start/End: Original strand, 41636885 - 41637037
Alignment:
Q  24 ataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttgg 123  Q
    ||||||||||| ||||| ||||||||||||||| | ||||||||||||||||||||||||| ||| ||||||||||||||||       || ||||||||    
T  41636885 ataagtcttaactttctaaaacacgtcccttaatttatttcttttattcaatttggtccaacttttataattttaatcccctaaaaaaagagaccgttgg 41636984  T
Q  124 attacgaaggtctatcagattttatagtgtatcatcaacacctaatttattta 176  Q
    |||||| | |||||||||||||||| |||||||| ||||||||||||||||||    
T  41636985 attacggaagtctatcagattttatcgtgtatcaccaacacctaatttattta 41637037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 24 - 176
Target Start/End: Complemental strand, 522161 - 522009
Alignment:
Q  24 ataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttgg 123  Q
    ||||||||||| ||||||||||| ||||||||||| |||| |||||||||||||| || |||||||||||||||||||||||       || || |||||    
T  522161 ataagtcttaactttctcaaacatgtcccttaacttatttattttattcaatttgatctaattttgataattttaatcccctagaaaaagagactgttgg 522062  T
Q  124 attacgaaggtctatcagattttatagtgtatcatcaacacctaatttattta 176  Q
    |||||| |||||||||| |||||||||||||||| |||| |||||||||||||    
T  522061 attacggaggtctatcaaattttatagtgtatcaccaacccctaatttattta 522009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 24 - 176
Target Start/End: Complemental strand, 20310116 - 20309963
Alignment:
Q  24 ataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaa-accgttg 122  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||||||| ||||||| |||||||||||||||||||||| |        || |||||||    
T  20310116 ataagtcttaagtttctcaaacacgtcccttaacttatttcttttattcgatttggttcaattttgataattttaatcccttagaaaaaaaagaccgttg 20310017  T
Q  123 gattacgaaggtctatcagattttatagtgtatcatcaacacctaatttattta 176  Q
    ||||| |||||||| |||||||||||||||||||| | |||||||| |||||||    
T  20310016 gattatgaaggtctgtcagattttatagtgtatcacctacacctaacttattta 20309963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 24 - 176
Target Start/End: Complemental strand, 21096749 - 21096596
Alignment:
Q  24 ataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaa-accgttg 122  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||||||| ||||||| |||||||||||||||||||||| |        || |||||||    
T  21096749 ataagtcttaagtttctcaaacacgtcccttaacttatttcttttattcgatttggttcaattttgataattttaatcccttagaaaaaaaagaccgttg 21096650  T
Q  123 gattacgaaggtctatcagattttatagtgtatcatcaacacctaatttattta 176  Q
    ||||| |||||||| |||||||||||||||||||| | |||||||| |||||||    
T  21096649 gattatgaaggtctgtcagattttatagtgtatcacctacacctaacttattta 21096596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 24 - 176
Target Start/End: Original strand, 20308977 - 20309129
Alignment:
Q  24 ataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttgg 123  Q
    |||||| |||| ||||||||||||||||||||| | |||  ||||||||||||||||||||||||||||||||| |||||||       || ||||||||    
T  20308977 ataagttttaactttctcaaacacgtcccttaatttattgtttttattcaatttggtccaattttgataattttgatcccctagaaaaagagaccgttgg 20309076  T
Q  124 attacgaaggtctatcagattttatagtgtatcatcaacacctaatttattta 176  Q
    || ||  ||||||||||||||||||||||||||| ||| ||||||||||||||    
T  20309077 atcactgaggtctatcagattttatagtgtatcaccaatacctaatttattta 20309129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 24 - 176
Target Start/End: Original strand, 21095610 - 21095762
Alignment:
Q  24 ataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttgg 123  Q
    |||||| |||| ||||||||||||||||||||| | |||  ||||||||||||||||||||||||||||||||| |||||||       || ||||||||    
T  21095610 ataagttttaactttctcaaacacgtcccttaatttattgtttttattcaatttggtccaattttgataattttgatcccctagaaaaagagaccgttgg 21095709  T
Q  124 attacgaaggtctatcagattttatagtgtatcatcaacacctaatttattta 176  Q
    || ||  ||||||||||||||||||||||||||| ||| ||||||||||||||    
T  21095710 atcactgaggtctatcagattttatagtgtatcaccaatacctaatttattta 21095762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 24 - 176
Target Start/End: Complemental strand, 30644768 - 30644617
Alignment:
Q  24 ataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttgg 123  Q
    |||| |||||| ||||||||||||||| ||||||| ||||||||||||||||||| ||||||||||||||||||||||| ||       || ||||||||    
T  30644768 ataaatcttaactttctcaaacacgtctcttaacttatttcttttattcaatttgatccaattttgataattttaatcctct-aaaaaagagaccgttgg 30644670  T
Q  124 attacgaaggtctatcagattttatagtgtatcatcaacacctaatttattta 176  Q
    |||||| |||||||||| |||||||| || |||| ||||||||||||||||||    
T  30644669 attacggaggtctatcaaattttataatggatcaccaacacctaatttattta 30644617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 40 - 176
Target Start/End: Original strand, 30640868 - 30641003
Alignment:
Q  40 tcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttggattacgaaggtctatc 139  Q
    |||||||||||  |||||| ||||||||||||||||||| ||||||||| ||||||||||||||||       || |||||||||||||| |||||||||    
T  30640868 tcaaacacgtca-ttaacttatttcttttattcaatttgatccaattttaataattttaatcccctaaaaaaagagaccgttggattacggaggtctatc 30640966  T
Q  140 agattttatagtgtatcatcaacacctaatttattta 176  Q
    | |||||||||||||||| ||||||||||||||||||    
T  30640967 aaattttatagtgtatcaccaacacctaatttattta 30641003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 24 - 176
Target Start/End: Original strand, 43584462 - 43584614
Alignment:
Q  24 ataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttgg 123  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||   |       || ||||||||    
T  43584462 ataagtcttaactttctcaaacacgtcccttaacttatttcttttattcaatttgatccaattttgataattttaatcttttaaaaaaagagaccgttgg 43584561  T
Q  124 attacgaaggtctatcagattttatagtgtatcatcaacacctaatttattta 176  Q
    ||||| || ||||||||||||||||| ||||||| |||   ||||||||||||    
T  43584562 attacaaaagtctatcagattttataatgtatcaccaatgtctaatttattta 43584614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 24 - 171
Target Start/End: Complemental strand, 41638216 - 41638070
Alignment:
Q  24 ataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttgg 123  Q
    ||||||||||| ||||||||||| |||| |||||| ||||||||||||||||||||||||||||| ||||||||||||||||       || ||  ||||    
T  41638216 ataagtcttaactttctcaaacatgtcctttaacttatttcttttattcaatttggtccaattttaataattttaatcccct-aaaaaagagacaattgg 41638118  T
Q  124 attacgaaggtctatcagattttatagtgtatcatcaacacctaattt 171  Q
    |||||  ||||||||||  ||||||||||||||| |||||||||||||    
T  41638117 attacagaggtctatcatgttttatagtgtatcaccaacacctaattt 41638070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 24 - 176
Target Start/End: Complemental strand, 26366258 - 26366106
Alignment:
Q  24 ataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttgg 123  Q
    |||||||||||  || ||||||| || || ||||| |||||||||||||||||||||||| |||| ||||||||||||||||        | |||||| |    
T  26366258 ataagtcttaaccttatcaaacatgttccataacttatttcttttattcaatttggtccatttttaataattttaatcccctaaaaaaaaagaccgttag 26366159  T
Q  124 attacgaaggtctatcagattttatagtgtatcatcaacacctaatttattta 176  Q
    |||||| |||||||| |||||||||||||||||| |||||| |||||||||||    
T  26366158 attacggaggtctattagattttatagtgtatcaccaacacataatttattta 26366106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 24 - 178
Target Start/End: Complemental strand, 43586008 - 43585855
Alignment:
Q  24 ataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttgg 123  Q
    ||||||||||||||||||||||| |||  |||| | ||||| ||||||||||||| ||||||||| ||||||||||| || |        | ||| ||||    
T  43586008 ataagtcttaattttctcaaacatgtctattaaattatttcatttattcaatttgatccaattttaataattttaat-cctttaaaaaaaagaccattgg 43585910  T
Q  124 attacgaaggtctatcagattttatagtgtatcatcaacacctaatttatttatt 178  Q
    |||| ||||||||| || |||||||||||||||||||| ||||||||||||||||    
T  43585909 attatgaaggtctaccatattttatagtgtatcatcaatacctaatttatttatt 43585855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 24 - 175
Target Start/End: Complemental strand, 34644024 - 34643878
Alignment:
Q  24 ataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttgg 123  Q
    |||| |||||| |||||||||||| ||  |||| | |||||||||||| ||||| || ||||||||||||||||||||||||       |  ||||||||    
T  34644024 ataaatcttaactttctcaaacacctctattaatttatttcttttatttaatttagttcaattttgataattttaatcccctaaaaaaag--accgttgg 34643927  T
Q  124 attacgaaggtctatcagattttatagtgtatcatcaacacctaatttattt 175  Q
    |||    |||||||||||||||||| | |||||| |||||||||||||||||    
T  34643926 att---gaggtctatcagattttatggcgtatcaccaacacctaatttattt 34643878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 24 - 72
Target Start/End: Original strand, 31203020 - 31203068
Alignment:
Q  24 ataagtcttaattttctcaaacacgtcccttaactgatttcttttattc 72  Q
    |||| |||||| ||||||||||||||||||||||| |||||||||||||    
T  31203020 ataaatcttaagtttctcaaacacgtcccttaacttatttcttttattc 31203068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 131 - 176
Target Start/End: Original strand, 22012298 - 22012343
Alignment:
Q  131 aggtctatcagattttatagtgtatcatcaacacctaatttattta 176  Q
    ||||||| ||||||||||||||||||| |||||||| |||||||||    
T  22012298 aggtctaccagattttatagtgtatcaccaacacctgatttattta 22012343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 131 - 176
Target Start/End: Complemental strand, 22013216 - 22013171
Alignment:
Q  131 aggtctatcagattttatagtgtatcatcaacacctaatttattta 176  Q
    ||||||| ||||||||||||||||||| |||||||| |||||||||    
T  22013216 aggtctaccagattttatagtgtatcaccaacacctgatttattta 22013171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 82
Target Start/End: Original strand, 9244083 - 9244117
Alignment:
Q  48 gtcccttaactgatttcttttattcaatttggtcc 82  Q
    ||||||||||| |||||||||||||||||||||||    
T  9244083 gtcccttaacttatttcttttattcaatttggtcc 9244117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 81
Target Start/End: Original strand, 26364759 - 26364792
Alignment:
Q  48 gtcccttaactgatttcttttattcaatttggtc 81  Q
    ||||||||||| ||||||||||||||||||||||    
T  26364759 gtcccttaacttatttcttttattcaatttggtc 26364792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 176
Target Start/End: Complemental strand, 43134025 - 43133980
Alignment:
Q  131 aggtctatcagattttatagtgtatcatcaacacctaatttattta 176  Q
    ||||||| ||||||||||||||||||| |||||| | |||||||||    
T  43134025 aggtctaccagattttatagtgtatcaccaacacttgatttattta 43133980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 48 - 80
Target Start/End: Complemental strand, 522197 - 522165
Alignment:
Q  48 gtcccttaactgatttcttttattcaatttggt 80  Q
    ||||||||||| |||||||||||||||||||||    
T  522197 gtcccttaacttatttcttttattcaatttggt 522165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 87; Significance: 1e-41; HSPs: 4)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 24 - 171
Target Start/End: Original strand, 31087 - 31234
Alignment:
Q  24 ataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttgg 123  Q
    ||||||||||| |||||||||||||||||| |||| |||||||||| ||||||||||||| |||| ||||||||||||||||        | ||||||||    
T  31087 ataagtcttaactttctcaaacacgtccctcaacttatttcttttactcaatttggtccagtttttataattttaatcccctaaaaaaacagaccgttgg 31186  T
Q  124 attacgaaggtctatcagattttatagtgtatcatcaacacctaattt 171  Q
    |||||| ||||||||||||||||||||||||||| |||||||||||||    
T  31187 attacggaggtctatcagattttatagtgtatcaccaacacctaattt 31234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 24 - 171
Target Start/End: Complemental strand, 35349 - 35202
Alignment:
Q  24 ataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttgg 123  Q
    ||||||||||| |||||||||||||||||| |||| |||||||||| |||||||||||||||||| ||||||||||||||||        | ||||||||    
T  35349 ataagtcttaactttctcaaacacgtccctcaacttatttcttttactcaatttggtccaatttttataattttaatcccctaaaaaaacagaccgttgg 35250  T
Q  124 attacgaaggtctatcagattttatagtgtatcatcaacacctaattt 171  Q
    |||||| ||||||||||||||||| ||||||||| |||||||||||||    
T  35249 attacggaggtctatcagattttacagtgtatcaccaacacctaattt 35202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 82
Target Start/End: Complemental strand, 35385 - 35351
Alignment:
Q  48 gtcccttaactgatttcttttattcaatttggtcc 82  Q
    ||||||||||| |||||||||||||||||||||||    
T  35385 gtcccttaacttatttcttttattcaatttggtcc 35351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 81
Target Start/End: Original strand, 31051 - 31084
Alignment:
Q  48 gtcccttaactgatttcttttattcaatttggtc 81  Q
    ||||||||||| ||||||||||||||||||||||    
T  31051 gtcccttaacttatttcttttattcaatttggtc 31084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 87; Significance: 1e-41; HSPs: 4)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 24 - 171
Target Start/End: Original strand, 79463 - 79610
Alignment:
Q  24 ataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttgg 123  Q
    ||||||||||| |||||||||||||||||| |||| |||||||||| |||||||||||||||||| ||||||||||||||||        | ||||||||    
T  79463 ataagtcttaactttctcaaacacgtccctcaacttatttcttttactcaatttggtccaatttttataattttaatcccctaaaaaaacagaccgttgg 79562  T
Q  124 attacgaaggtctatcagattttatagtgtatcatcaacacctaattt 171  Q
    |||||| ||||||||||||||||| ||||||||| |||||||||||||    
T  79563 attacggaggtctatcagattttacagtgtatcaccaacacctaattt 79610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 24 - 171
Target Start/End: Complemental strand, 83725 - 83578
Alignment:
Q  24 ataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttgg 123  Q
    ||||||||||| |||||||||||||||||| |||| |||||||||| ||||||||||||| |||| ||||||||||||||||        | ||||||||    
T  83725 ataagtcttaactttctcaaacacgtccctcaacttatttcttttactcaatttggtccagtttttataattttaatcccctaaaaaaacagaccgttgg 83626  T
Q  124 attacgaaggtctatcagattttatagtgtatcatcaacacctaattt 171  Q
    |||||| ||||||||||||||||||||||||||| |||||||||||||    
T  83625 attacggaggtctatcagattttatagtgtatcaccaacacctaattt 83578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 82
Target Start/End: Original strand, 79427 - 79461
Alignment:
Q  48 gtcccttaactgatttcttttattcaatttggtcc 82  Q
    ||||||||||| |||||||||||||||||||||||    
T  79427 gtcccttaacttatttcttttattcaatttggtcc 79461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 81
Target Start/End: Complemental strand, 83761 - 83728
Alignment:
Q  48 gtcccttaactgatttcttttattcaatttggtc 81  Q
    ||||||||||| ||||||||||||||||||||||    
T  83761 gtcccttaacttatttcttttattcaatttggtc 83728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0878 (Bit Score: 85; Significance: 2e-40; HSPs: 3)
Name: scaffold0878
Description:

Target: scaffold0878; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 24 - 176
Target Start/End: Complemental strand, 3091 - 2938
Alignment:
Q  24 ataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcc-cctnnnnnnngaaaccgttg 122  Q
    ||||||||||| ||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||            | ||||||     
T  3091 ataagtcttaactttctcagacacgtcccttaacttatttcttttattcaatttggtccaattttgataattttaatccaaaaaaaaaaacagaccgtta 2992  T
Q  123 gattacgaaggtctatcagattttatagtgtatcatcaacacctaatttattta 176  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  2991 gattacgaaggtctatcagattttatagtgtatcaccaacacctaatttattta 2938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0878; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 48 - 176
Target Start/End: Original strand, 1847 - 1974
Alignment:
Q  48 gtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttggattacgaaggtctatcagatttta 147  Q
    ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||           | |||||| ||||||||| |||||| |||||||     
T  1847 gtcccttaacttatttcttttattcaatttggtccaatttt-ataattttaatccaaaaaaaatatagaccgttagattacgaatgtctattagattttc 1945  T
Q  148 tagtgtatcatcaacacctaatttattta 176  Q
     ||||||||| ||||||||||||||||||    
T  1946 cagtgtatcaccaacacctaatttattta 1974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0878; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 82
Target Start/End: Complemental strand, 3127 - 3093
Alignment:
Q  48 gtcccttaactgatttcttttattcaatttggtcc 82  Q
    ||||||||||| |||||||||||||||||||||||    
T  3127 gtcccttaacttatttcttttattcaatttggtcc 3093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 84; Significance: 7e-40; HSPs: 13)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 24 - 176
Target Start/End: Original strand, 16602779 - 16602931
Alignment:
Q  24 ataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttgg 123  Q
    ||||||||||| ||||||||||||||||||||||| |||||||||||| || ||||||||||||||||||||||||||||          | ||||||||    
T  16602779 ataagtcttaactttctcaaacacgtcccttaacttatttcttttatttaaattggtccaattttgataattttaatccctaaaaaaaaaagaccgttgg 16602878  T
Q  124 attacgaaggtctatcagattttatagtgtatcatcaacacctaatttattta 176  Q
    |||||| | ||||||||||||||| ||||||||| ||||||||||||||||||    
T  16602879 attacggatgtctatcagattttacagtgtatcaccaacacctaatttattta 16602931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 24 - 176
Target Start/End: Complemental strand, 27892400 - 27892248
Alignment:
Q  24 ataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttgg 123  Q
    ||||||||||| ||||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||            | |||||| |    
T  27892400 ataagtcttaactttctcagacacgtcccttaacttatttcttttattcaatttgatccaattttgataattttaatcaaaaaaaaaaacagaccgttag 27892301  T
Q  124 attacgaaggtctatcagattttatagtgtatcatcaacacctaatttattta 176  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  27892300 attacgaaggtctatcagattttatagtgtatcaccaacacctaatttattta 27892248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 24 - 176
Target Start/End: Complemental strand, 38244019 - 38243867
Alignment:
Q  24 ataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttgg 123  Q
    ||||||||||| ||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||       || || |||||    
T  38244019 ataagtcttaactttttcaaacacgtcccttaacttatttcttttattcaatttggtccaattttgataattttaatctcctaaaaaaagatactgttgg 38243920  T
Q  124 attacgaaggtctatcagattttatagtgtatcatcaacacctaatttattta 176  Q
    ||||| ||||| ||| |||||||| ||||||| | ||||||| ||||||||||    
T  38243919 attacaaaggtgtataagattttacagtgtattaccaacaccaaatttattta 38243867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 24 - 168
Target Start/End: Original strand, 23833022 - 23833165
Alignment:
Q  24 ataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttgg 123  Q
    ||||||||||| |||||||||||||||| ||||||  ||| ||||||||||||| |||||||||||||||||||||||||||        | ||||||||    
T  23833022 ataagtcttaactttctcaaacacgtcc-ttaacttttttattttattcaatttagtccaattttgataattttaatcccctaaaaaagaagaccgttgg 23833120  T
Q  124 attacgaaggtctatcagattttatagtgtatcatcaacacctaa 168  Q
    |||||| |||||||  |||||||||||||||||||||||||||||    
T  23833121 attacggaggtctagaagattttatagtgtatcatcaacacctaa 23833165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 28 - 176
Target Start/End: Original strand, 27891164 - 27891312
Alignment:
Q  28 gtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttggatta 127  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||| |||||| |||||||||||||||||||             | |||||| |||||    
T  27891164 gtcttaactttctcaaacacgtcccttaacttatttcttttattcattttggttcaattttgataattttaataaaaaaaaaaaacagaccgttagatta 27891263  T
Q  128 cgaaggtctatcagattttatagtgtatcatcaacacctaatttattta 176  Q
    |||| ||||||||||||||  ||||||||| ||||||||||||||||||    
T  27891264 cgaatgtctatcagattttccagtgtatcaccaacacctaatttattta 27891312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 24 - 147
Target Start/End: Original strand, 26388272 - 26388395
Alignment:
Q  24 ataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttgg 123  Q
    ||||||||||| |||||||||||||||| |||||| |||||||||||| |||||| | |||||||||||||||||||||| |        | |||||| |    
T  26388272 ataagtcttaactttctcaaacacgtcctttaacttatttcttttatttaatttgattcaattttgataattttaatcccatataaaaaaagaccgtttg 26388371  T
Q  124 attacgaaggtctatcagatttta 147  Q
    |||||| |||||||||||||||||    
T  26388372 attacggaggtctatcagatttta 26388395  T

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Target: chr2; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 31 - 176
Target Start/End: Original strand, 38242944 - 38243086
Alignment:
Q  31 ttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttggattacga 130  Q
    |||| ||| ||||||| ||| ||||||| |||||||||||| |||||| |||||||||||||||||||||| |||       || ||||||||||||| |    
T  38242944 ttaactttttcaaacatgtctcttaacttatttcttttatttaatttgatccaattttgataattttaatctcctaaaaaaagagaccgttggattacaa 38243043  T
Q  131 aggtctatcagattttatagtgtatcatcaacacctaatttattta 176  Q
    ||   ||| |||||||||| ||||||| ||||||| ||||||||||    
T  38243044 ag---tataagattttataatgtatcaccaacaccaaatttattta 38243086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 24 - 82
Target Start/End: Complemental strand, 16604253 - 16604195
Alignment:
Q  24 ataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtcc 82  Q
    ||||||||||| |||||||| ||||||||| |||| |||||||||||||||||||||||    
T  16604253 ataagtcttaagtttctcaagcacgtccctgaacttatttcttttattcaatttggtcc 16604195  T

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Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 24 - 78
Target Start/End: Original strand, 43814575 - 43814629
Alignment:
Q  24 ataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttg 78  Q
    ||||||||||| ||||||||| |||||| |||||| |||||||||||||||||||    
T  43814575 ataagtcttaactttctcaaatacgtcctttaacttatttcttttattcaatttg 43814629  T

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Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 82
Target Start/End: Complemental strand, 16604289 - 16604255
Alignment:
Q  48 gtcccttaactgatttcttttattcaatttggtcc 82  Q
    ||||||||||| |||||||||||||||||||||||    
T  16604289 gtcccttaacttatttcttttattcaatttggtcc 16604255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 24 - 58
Target Start/End: Complemental strand, 23833934 - 23833900
Alignment:
Q  24 ataagtcttaattttctcaaacacgtcccttaact 58  Q
    ||||||||||| |||||||||||||||||||||||    
T  23833934 ataagtcttaactttctcaaacacgtcccttaact 23833900  T

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Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 81
Target Start/End: Original strand, 27891124 - 27891157
Alignment:
Q  48 gtcccttaactgatttcttttattcaatttggtc 81  Q
    ||||||||||| ||||||||||||||||||||||    
T  27891124 gtcccttaacttatttcttttattcaatttggtc 27891157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 81
Target Start/End: Complemental strand, 27892436 - 27892403
Alignment:
Q  48 gtcccttaactgatttcttttattcaatttggtc 81  Q
    ||||||||||| ||||||||||||||||||||||    
T  27892436 gtcccttaacttatttcttttattcaatttggtc 27892403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 73; Significance: 2e-33; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 24 - 176
Target Start/End: Complemental strand, 25409 - 25256
Alignment:
Q  24 ataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnnga-aaccgttg 122  Q
    ||||||||||| ||||||||||||||||||||| | |||||||||||| |||||||||||||||||||||||||||||   |       ||  || ||||    
T  25409 ataagtcttaactttctcaaacacgtcccttaatttatttcttttattaaatttggtccaattttgataattttaatcatttaaaacaagaggacagttg 25310  T
Q  123 gattacgaaggtctatcagattttatagtgtatcatcaacacctaatttattta 176  Q
    ||||||| |||| ||||| |||||||||||||| ||||||||||||||||||||    
T  25309 gattacggaggtttatcacattttatagtgtattatcaacacctaatttattta 25256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 49 - 81
Target Start/End: Complemental strand, 25444 - 25412
Alignment:
Q  49 tcccttaactgatttcttttattcaatttggtc 81  Q
    |||||||||| ||||||||||||||||||||||    
T  25444 tcccttaacttatttcttttattcaatttggtc 25412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1425 (Bit Score: 71; Significance: 4e-32; HSPs: 3)
Name: scaffold1425
Description:

Target: scaffold1425; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 24 - 171
Target Start/End: Original strand, 188 - 335
Alignment:
Q  24 ataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttgg 123  Q
    ||||||||||| |||||||||||||||| |||| | ||||| |||||||||||||||| |||||||||||||||||| || |       || ||||||||    
T  188 ataagtcttaactttctcaaacacgtcctttaatttatttcctttattcaatttggtcaaattttgataattttaattccttaaaaaaagagaccgttgg 287  T
Q  124 attacgaaggtctatcagattttatagtgtatcatcaacacctaattt 171  Q
    |||||  ||||||||||||||||| || |||||| |||||||||||||    
T  288 attacagaggtctatcagattttacagcgtatcaccaacacctaattt 335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1425; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 24 - 176
Target Start/End: Complemental strand, 1665 - 1513
Alignment:
Q  24 ataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttgg 123  Q
    ||||||||||| |||||||||||||||| |||| | ||||| |||||||||||||||||||||||||||||||||||||| |        | ||||||||    
T  1665 ataagtcttaactttctcaaacacgtcctttaatttatttcctttattcaatttggtccaattttgataattttaatcccttaaaaaaacagaccgttgg 1566  T
Q  124 attacgaaggtctatcagattttatagtgtatcatcaacacctaatttattta 176  Q
    ||||   |||||||||||||||||  |||||| | ||||||||||||| ||||    
T  1565 attatagaggtctatcagattttacggtgtataaccaacacctaattttttta 1513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1425; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 48 - 80
Target Start/End: Complemental strand, 1701 - 1669
Alignment:
Q  48 gtcccttaactgatttcttttattcaatttggt 80  Q
    ||||||||||| |||||||||||||||||||||    
T  1701 gtcccttaacttatttcttttattcaatttggt 1669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 73 - 176
Target Start/End: Original strand, 9261 - 9363
Alignment:
Q  73 aatttggtccaattttgataattttaatcccctnnnnnnngaaaccgttggattacgaaggtctatcagattttatagtgtatcatcaacacctaattta 172  Q
    |||||| |||||||||||| |||||||||||||       || |||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||    
T  9261 aatttgatccaattttgatgattttaatcccctaaaaaa-gagaccgttggattacggaggtctatcagattttatagtgtatcaccaacacctaattta 9359  T
Q  173 ttta 176  Q
    ||||    
T  9360 ttta 9363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 3)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 124 - 176
Target Start/End: Original strand, 104405 - 104457
Alignment:
Q  124 attacgaaggtctatcagattttatagtgtatcatcaacacctaatttattta 176  Q
    |||||| ||||||||||||||||||||||||||| ||||| ||||||||||||    
T  104405 attacggaggtctatcagattttatagtgtatcaccaacatctaatttattta 104457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 24 - 76
Target Start/End: Original strand, 104355 - 104407
Alignment:
Q  24 ataagtcttaattttctcaaacacgtcccttaactgatttcttttattcaatt 76  Q
    |||||| ||||  |||||||||||||||||||||| |||||||||||||||||    
T  104355 ataagttttaacattctcaaacacgtcccttaacttatttcttttattcaatt 104407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 82
Target Start/End: Original strand, 104319 - 104353
Alignment:
Q  48 gtcccttaactgatttcttttattcaatttggtcc 82  Q
    ||||||||||| |||||||||||||||||||||||    
T  104319 gtcccttaacttatttcttttattcaatttggtcc 104353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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