View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1126_high_124 (Length: 285)

Name: NF1126_high_124
Description: NF1126
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1126_high_124
NF1126_high_124
[»] chr5 (65 HSPs)
chr5 (30-117)||(5182752-5182839)
chr5 (141-225)||(21191051-21191135)
chr5 (152-226)||(6247613-6247687)
chr5 (141-215)||(14674249-14674323)
chr5 (152-225)||(33178016-33178089)
chr5 (147-234)||(8420013-8420100)
chr5 (171-226)||(43564891-43564946)
chr5 (157-226)||(21576739-21576808)
chr5 (157-220)||(19579697-19579760)
chr5 (141-208)||(22013394-22013461)
chr5 (158-224)||(16203791-16203857)
chr5 (152-226)||(28588668-28588742)
chr5 (159-225)||(42893358-42893424)
chr5 (159-220)||(7677703-7677764)
chr5 (133-226)||(15883957-15884053)
chr5 (147-220)||(31084309-31084382)
chr5 (147-220)||(39698527-39698600)
chr5 (141-220)||(21522730-21522809)
chr5 (141-220)||(21533296-21533375)
chr5 (139-213)||(27144441-27144515)
chr5 (141-219)||(36642763-36642841)
chr5 (147-220)||(2436908-2436981)
chr5 (160-220)||(13287399-13287459)
chr5 (159-226)||(14422902-14422967)
chr5 (141-220)||(19552545-19552622)
chr5 (162-226)||(30502382-30502446)
chr5 (162-226)||(30542725-30542789)
chr5 (141-221)||(15382457-15382539)
chr5 (158-220)||(3966500-3966562)
chr5 (158-220)||(11685936-11685998)
chr5 (162-220)||(36838544-36838602)
chr5 (159-220)||(37328844-37328905)
chr5 (159-220)||(41633733-41633794)
chr5 (159-219)||(21351906-21351966)
chr5 (160-224)||(23220982-23221046)
chr5 (161-220)||(6471889-6471948)
chr5 (157-220)||(10298565-10298628)
chr5 (141-220)||(21542010-21542089)
chr5 (167-226)||(23012402-23012461)
chr5 (157-218)||(17177025-17177086)
chr5 (161-226)||(18421835-18421900)
chr5 (141-225)||(19820391-19820473)
chr5 (157-226)||(27932231-27932300)
chr5 (141-217)||(41995451-41995525)
chr5 (160-217)||(43001799-43001856)
chr5 (181-225)||(2548407-2548451)
chr5 (160-216)||(7218271-7218327)
chr5 (171-219)||(14873527-14873575)
chr5 (168-220)||(40131628-40131680)
chr5 (161-220)||(5894833-5894892)
chr5 (157-219)||(30135309-30135372)
chr5 (168-207)||(35017044-35017083)
chr5 (161-220)||(41091257-41091316)
chr5 (144-213)||(17088267-17088337)
chr5 (158-220)||(30183546-30183608)
chr5 (243-285)||(5182613-5182659)
chr5 (169-214)||(5467984-5468029)
chr5 (147-220)||(6035469-6035541)
chr5 (167-224)||(12927660-12927717)
chr5 (157-226)||(34879346-34879415)
chr5 (181-226)||(42029772-42029817)
chr5 (160-216)||(12159951-12160007)
chr5 (161-213)||(15405062-15405114)
chr5 (170-226)||(26312778-26312834)
chr5 (160-220)||(39205879-39205939)
[»] scaffold0003 (1 HSPs)
scaffold0003 (108-220)||(241547-241653)
[»] chr6 (92 HSPs)
chr6 (140-226)||(17841583-17841669)
chr6 (141-232)||(426502-426593)
chr6 (123-225)||(7938084-7938180)
chr6 (141-226)||(34595114-34595199)
chr6 (138-226)||(28152076-28152163)
chr6 (123-220)||(16766665-16766756)
chr6 (147-232)||(5732498-5732583)
chr6 (152-225)||(7977825-7977898)
chr6 (152-226)||(33001283-33001357)
chr6 (141-226)||(8776967-8777052)
chr6 (157-232)||(7801143-7801219)
chr6 (141-220)||(3398599-3398677)
chr6 (157-220)||(9107370-9107433)
chr6 (141-220)||(12696304-12696383)
chr6 (152-222)||(853857-853927)
chr6 (141-226)||(4877922-4878008)
chr6 (147-225)||(7265588-7265666)
chr6 (152-226)||(19040343-19040417)
chr6 (157-226)||(32978893-32978963)
chr6 (169-226)||(403858-403915)
chr6 (157-221)||(3209377-3209442)
chr6 (147-220)||(10770674-10770747)
chr6 (141-218)||(16833288-16833365)
chr6 (161-226)||(28715295-28715360)
chr6 (154-226)||(1191694-1191766)
chr6 (141-220)||(8365519-8365598)
chr6 (135-214)||(10842506-10842585)
chr6 (140-232)||(20371098-20371190)
chr6 (157-225)||(21924930-21924998)
chr6 (147-226)||(6898275-6898354)
chr6 (167-218)||(7086801-7086852)
chr6 (159-226)||(7377977-7378044)
chr6 (161-220)||(9025494-9025553)
chr6 (141-220)||(9027158-9027237)
chr6 (152-215)||(31959150-31959213)
chr6 (171-225)||(1700362-1700416)
chr6 (158-220)||(7930302-7930364)
chr6 (141-231)||(13851716-13851806)
chr6 (157-214)||(1681754-1681811)
chr6 (152-221)||(9629374-9629443)
chr6 (141-218)||(9658859-9658936)
chr6 (152-213)||(17341671-17341732)
chr6 (161-222)||(32511664-32511725)
chr6 (160-220)||(5970108-5970168)
chr6 (180-232)||(7027261-7027312)
chr6 (168-220)||(7151419-7151471)
chr6 (168-220)||(9195754-9195806)
chr6 (168-220)||(31384927-31384979)
chr6 (162-220)||(9911528-9911587)
chr6 (157-220)||(21395308-21395370)
chr6 (160-226)||(24645479-24645546)
chr6 (157-220)||(26562685-26562748)
chr6 (158-220)||(34290079-34290139)
chr6 (158-220)||(7996378-7996440)
chr6 (158-220)||(8022361-8022423)
chr6 (168-218)||(9522898-9522948)
chr6 (122-219)||(19044431-19044522)
chr6 (168-218)||(26178683-26178733)
chr6 (169-226)||(31579221-31579276)
chr6 (168-225)||(12627572-12627629)
chr6 (147-220)||(17327655-17327728)
chr6 (159-232)||(2117074-2117151)
chr6 (170-226)||(7740650-7740706)
chr6 (180-220)||(7973673-7973713)
chr6 (167-218)||(8805576-8805625)
chr6 (157-220)||(8931602-8931665)
chr6 (169-220)||(9617442-9617493)
chr6 (161-212)||(10888982-10889033)
chr6 (160-219)||(15489733-15489792)
chr6 (167-226)||(24614416-24614475)
chr6 (171-225)||(4864073-4864127)
chr6 (170-208)||(16388245-16388283)
chr6 (160-194)||(25010228-25010262)
chr6 (180-226)||(26402674-26402720)
chr6 (147-226)||(27904030-27904111)
chr6 (157-226)||(30851598-30851665)
chr6 (141-215)||(30866149-30866223)
chr6 (160-220)||(8713978-8714039)
chr6 (172-225)||(13360367-13360420)
chr6 (189-226)||(16388211-16388248)
chr6 (157-226)||(23771575-23771643)
chr6 (161-218)||(24138426-24138483)
chr6 (135-219)||(31429004-31429088)
chr6 (167-220)||(34073347-34073400)
chr6 (161-206)||(34225823-34225868)
chr6 (168-220)||(16111757-16111809)
chr6 (161-213)||(17302347-17302399)
chr6 (160-212)||(17435198-17435250)
chr6 (184-224)||(32298603-32298643)
chr6 (157-213)||(33340392-33340448)
chr6 (158-226)||(34172190-34172258)
chr6 (157-213)||(35125650-35125706)
[»] chr1 (97 HSPs)
chr1 (140-226)||(46348377-46348463)
chr1 (147-226)||(22881610-22881689)
chr1 (161-226)||(22515881-22515946)
chr1 (159-232)||(31672883-31672956)
chr1 (152-220)||(1486709-1486777)
chr1 (147-226)||(37598818-37598896)
chr1 (160-226)||(38078655-38078721)
chr1 (157-226)||(41877464-41877533)
chr1 (152-220)||(113290-113358)
chr1 (147-226)||(36878447-36878526)
chr1 (141-220)||(5944261-5944342)
chr1 (147-225)||(9103626-9103703)
chr1 (152-226)||(19058850-19058924)
chr1 (142-224)||(42359445-42359527)
chr1 (141-215)||(48450592-48450666)
chr1 (158-226)||(51410021-51410090)
chr1 (141-213)||(398772-398844)
chr1 (157-213)||(14359529-14359584)
chr1 (140-220)||(18556456-18556536)
chr1 (157-225)||(39953141-39953209)
chr1 (159-226)||(1864874-1864941)
chr1 (141-220)||(6612171-6612250)
chr1 (170-225)||(18337338-18337393)
chr1 (161-220)||(24577186-24577245)
chr1 (161-220)||(25272482-25272541)
chr1 (152-215)||(31015034-31015097)
chr1 (147-218)||(32461465-32461536)
chr1 (159-226)||(40258927-40258994)
chr1 (168-226)||(14332636-14332694)
chr1 (159-220)||(1704992-1705053)
chr1 (157-226)||(5898260-5898329)
chr1 (157-226)||(21530685-21530754)
chr1 (158-226)||(35702582-35702650)
chr1 (161-225)||(40181871-40181935)
chr1 (147-226)||(1815243-1815322)
chr1 (141-224)||(5927336-5927419)
chr1 (141-232)||(9709800-9709891)
chr1 (159-218)||(21378576-21378635)
chr1 (141-220)||(47989478-47989556)
chr1 (157-226)||(13436454-13436523)
chr1 (164-213)||(15323166-15323215)
chr1 (152-220)||(40917742-40917808)
chr1 (142-226)||(2896115-2896199)
chr1 (160-220)||(9629900-9629960)
chr1 (157-225)||(12443456-12443523)
chr1 (158-225)||(13011210-13011278)
chr1 (161-225)||(18190103-18190167)
chr1 (181-225)||(30749860-30749904)
chr1 (181-225)||(30771311-30771355)
chr1 (157-220)||(5376500-5376563)
chr1 (161-220)||(6332671-6332729)
chr1 (157-220)||(9828040-9828103)
chr1 (147-218)||(13997869-13997940)
chr1 (159-218)||(23738676-23738735)
chr1 (141-216)||(18471278-18471355)
chr1 (160-225)||(24462671-24462737)
chr1 (161-219)||(28273089-28273147)
chr1 (135-213)||(29144365-29144443)
chr1 (147-220)||(6427336-6427409)
chr1 (161-220)||(17778549-17778605)
chr1 (157-226)||(29163375-29163444)
chr1 (161-221)||(29229461-29229522)
chr1 (167-220)||(34712383-34712436)
chr1 (135-224)||(38075966-38076054)
chr1 (171-220)||(44482240-44482289)
chr1 (181-226)||(52903269-52903314)
chr1 (168-220)||(7918211-7918263)
chr1 (180-220)||(15449232-15449272)
chr1 (169-213)||(16164322-16164366)
chr1 (160-220)||(20157350-20157410)
chr1 (159-226)||(24334699-24334767)
chr1 (180-220)||(35919276-35919316)
chr1 (159-219)||(38503318-38503378)
chr1 (189-225)||(39130762-39130798)
chr1 (141-216)||(48040465-48040541)
chr1 (159-218)||(17754309-17754368)
chr1 (147-214)||(17831537-17831604)
chr1 (152-219)||(19562622-19562689)
chr1 (157-220)||(25361882-25361945)
chr1 (160-220)||(31694710-31694772)
chr1 (159-218)||(32434718-32434777)
chr1 (181-220)||(34371733-34371772)
chr1 (186-220)||(2218264-2218298)
chr1 (152-218)||(10572591-10572657)
chr1 (141-207)||(16927198-16927264)
chr1 (180-226)||(21620974-21621020)
chr1 (158-212)||(25098563-25098617)
chr1 (157-194)||(1262880-1262917)
chr1 (171-220)||(2283676-2283725)
chr1 (167-220)||(7353493-7353546)
chr1 (181-225)||(2784576-2784620)
chr1 (166-214)||(8010293-8010341)
chr1 (169-225)||(22907334-22907390)
chr1 (141-225)||(23636044-23636128)
chr1 (162-225)||(25452145-25452206)
chr1 (160-216)||(34257914-34257970)
chr1 (159-207)||(34298434-34298482)
[»] chr8 (66 HSPs)
chr8 (137-220)||(15816129-15816212)
chr8 (141-226)||(20873049-20873134)
chr8 (159-227)||(24613519-24613586)
chr8 (140-226)||(36450748-36450834)
chr8 (157-226)||(5813588-5813657)
chr8 (159-220)||(8342970-8343031)
chr8 (141-226)||(8343296-8343381)
chr8 (160-220)||(2572056-2572116)
chr8 (157-225)||(13844591-13844659)
chr8 (141-220)||(22651956-22652035)
chr8 (161-220)||(25566841-25566900)
chr8 (157-219)||(4298887-4298949)
chr8 (168-226)||(4948659-4948717)
chr8 (123-220)||(13436964-13437055)
chr8 (147-224)||(27101501-27101577)
chr8 (141-218)||(29510306-29510383)
chr8 (123-226)||(31556965-31557061)
chr8 (152-223)||(22595985-22596056)
chr8 (157-219)||(22197743-22197805)
chr8 (147-217)||(25192350-25192420)
chr8 (157-226)||(31236571-31236640)
chr8 (169-226)||(33405378-33405435)
chr8 (160-225)||(34897084-34897149)
chr8 (158-226)||(18407716-18407784)
chr8 (157-217)||(39954282-39954342)
chr8 (167-226)||(3025557-3025616)
chr8 (157-220)||(11927086-11927149)
chr8 (165-228)||(30077379-30077442)
chr8 (147-220)||(30271291-30271364)
chr8 (161-226)||(40332191-40332256)
chr8 (158-214)||(41831946-41832002)
chr8 (147-222)||(4786336-4786411)
chr8 (157-220)||(11944661-11944724)
chr8 (161-212)||(14731712-14731763)
chr8 (141-224)||(18170478-18170561)
chr8 (141-224)||(18634046-18634129)
chr8 (168-219)||(20679396-20679447)
chr8 (141-223)||(926785-926867)
chr8 (141-219)||(4673426-4673504)
chr8 (187-220)||(16867205-16867238)
chr8 (160-224)||(12606825-12606889)
chr8 (157-213)||(24362209-24362265)
chr8 (142-214)||(44067497-44067569)
chr8 (168-219)||(14134706-14134757)
chr8 (161-220)||(21465412-21465471)
chr8 (141-220)||(24669413-24669492)
chr8 (161-220)||(25172698-25172757)
chr8 (181-220)||(26902175-26902214)
chr8 (160-219)||(29447111-29447170)
chr8 (159-217)||(4611532-4611590)
chr8 (182-220)||(8847277-8847315)
chr8 (180-226)||(25886988-25887033)
chr8 (157-215)||(27213543-27213601)
chr8 (181-223)||(31580124-31580166)
chr8 (162-220)||(35519807-35519865)
chr8 (157-218)||(7658459-7658520)
chr8 (167-216)||(34222953-34223002)
chr8 (147-212)||(41838131-41838196)
chr8 (181-226)||(43737805-43737850)
chr8 (168-220)||(7472515-7472567)
chr8 (169-225)||(12985400-12985456)
chr8 (160-220)||(17468508-17468568)
chr8 (159-219)||(28384995-28385055)
chr8 (160-212)||(36934669-36934721)
chr8 (167-226)||(37283806-37283863)
chr8 (161-221)||(44694791-44694851)
[»] scaffold0053 (1 HSPs)
scaffold0053 (141-226)||(8778-8863)
[»] chr4 (67 HSPs)
chr4 (141-226)||(2361969-2362054)
chr4 (141-226)||(23292980-23293065)
chr4 (142-226)||(35157979-35158063)
chr4 (147-226)||(49431011-49431091)
chr4 (110-224)||(21945458-21945566)
chr4 (152-226)||(12895268-12895342)
chr4 (161-226)||(54580017-54580082)
chr4 (159-226)||(8423712-8423779)
chr4 (161-226)||(4157150-4157214)
chr4 (141-226)||(12797332-12797416)
chr4 (161-226)||(28964242-28964307)
chr4 (140-220)||(30298925-30299006)
chr4 (140-220)||(30327793-30327874)
chr4 (157-226)||(34306798-34306866)
chr4 (162-226)||(29205445-29205509)
chr4 (158-220)||(3947766-3947828)
chr4 (157-226)||(42640522-42640594)
chr4 (169-218)||(6485613-6485662)
chr4 (175-227)||(6879458-6879510)
chr4 (157-220)||(11596352-11596415)
chr4 (157-220)||(12895116-12895179)
chr4 (141-220)||(19482648-19482727)
chr4 (159-222)||(38847010-38847073)
chr4 (141-212)||(40481617-40481687)
chr4 (180-226)||(4157455-4157501)
chr4 (147-221)||(15029751-15029825)
chr4 (152-226)||(16073386-16073459)
chr4 (157-222)||(4672083-4672148)
chr4 (142-223)||(10499267-10499347)
chr4 (147-220)||(16303266-16303339)
chr4 (169-226)||(40179630-40179687)
chr4 (157-220)||(13134446-13134509)
chr4 (159-226)||(31800472-31800539)
chr4 (161-212)||(37203264-37203315)
chr4 (152-215)||(40613441-40613504)
chr4 (161-212)||(51701258-51701309)
chr4 (180-226)||(482232-482278)
chr4 (169-219)||(5775359-5775409)
chr4 (167-225)||(33950142-33950200)
chr4 (180-226)||(36409506-36409552)
chr4 (180-226)||(36423672-36423718)
chr4 (157-220)||(50280877-50280942)
chr4 (159-219)||(715608-715669)
chr4 (159-219)||(752934-752995)
chr4 (158-219)||(11931277-11931338)
chr4 (147-212)||(27706185-27706250)
chr4 (152-220)||(28084512-28084581)
chr4 (167-220)||(30838216-30838269)
chr4 (167-220)||(30982878-30982931)
chr4 (157-213)||(14126118-14126174)
chr4 (157-220)||(22234890-22234954)
chr4 (168-219)||(7214523-7214574)
chr4 (162-225)||(16189710-16189773)
chr4 (160-219)||(24613702-24613761)
chr4 (146-220)||(35723384-35723459)
chr4 (160-219)||(47263985-47264044)
chr4 (182-220)||(46083991-46084029)
chr4 (147-220)||(4383354-4383426)
chr4 (147-212)||(11651142-11651207)
chr4 (157-214)||(24343503-24343560)
chr4 (181-226)||(35161056-35161101)
chr4 (147-212)||(36635310-36635375)
chr4 (157-226)||(7377365-7377436)
chr4 (180-220)||(19312354-19312394)
chr4 (168-216)||(21658818-21658866)
chr4 (152-220)||(32273526-32273594)
chr4 (160-220)||(38148725-38148785)
[»] chr3 (79 HSPs)
chr3 (159-232)||(7928448-7928521)
chr3 (157-226)||(55401071-55401140)
chr3 (141-226)||(8383237-8383322)
chr3 (161-220)||(1509539-1509598)
chr3 (141-224)||(8587017-8587100)
chr3 (123-226)||(10318029-10318131)
chr3 (147-225)||(10268481-10268559)
chr3 (152-226)||(10954943-10955017)
chr3 (152-220)||(28917992-28918060)
chr3 (167-231)||(49505143-49505207)
chr3 (161-225)||(51206348-51206412)
chr3 (147-221)||(21479104-21479178)
chr3 (158-220)||(27505243-27505305)
chr3 (152-217)||(4987294-4987359)
chr3 (141-226)||(10335280-10335365)
chr3 (141-226)||(16000010-16000095)
chr3 (141-226)||(26492199-26492284)
chr3 (152-217)||(26508101-26508166)
chr3 (147-220)||(34185123-34185196)
chr3 (158-226)||(35994733-35994799)
chr3 (141-220)||(14829670-14829748)
chr3 (141-220)||(15796294-15796373)
chr3 (147-226)||(20503451-20503530)
chr3 (141-220)||(25948887-25948966)
chr3 (157-220)||(34910313-34910376)
chr3 (147-220)||(14747547-14747621)
chr3 (158-220)||(49651786-49651848)
chr3 (141-206)||(25064889-25064954)
chr3 (135-226)||(25775481-25775574)
chr3 (141-218)||(55212943-55213020)
chr3 (141-225)||(25093482-25093566)
chr3 (159-226)||(8789544-8789611)
chr3 (157-220)||(14209109-14209172)
chr3 (157-204)||(14979177-14979224)
chr3 (161-216)||(21256990-21257045)
chr3 (157-220)||(28812511-28812574)
chr3 (140-223)||(33359740-33359823)
chr3 (160-226)||(40993329-40993396)
chr3 (157-215)||(1514613-1514671)
chr3 (159-212)||(11313808-11313861)
chr3 (167-220)||(11665950-11666003)
chr3 (161-224)||(8593136-8593200)
chr3 (172-220)||(15314876-15314924)
chr3 (141-225)||(24205037-24205120)
chr3 (157-220)||(14832095-14832158)
chr3 (158-213)||(32804547-32804602)
chr3 (147-194)||(40052318-40052365)
chr3 (141-220)||(41961650-41961729)
chr3 (160-202)||(3164043-3164085)
chr3 (168-218)||(17005621-17005671)
chr3 (167-221)||(38731224-38731278)
chr3 (157-222)||(18426945-18427010)
chr3 (161-206)||(27277852-27277897)
chr3 (147-226)||(32400702-32400778)
chr3 (161-214)||(34307786-34307839)
chr3 (147-220)||(39756222-39756295)
chr3 (158-226)||(7171499-7171566)
chr3 (152-220)||(8039835-8039903)
chr3 (158-226)||(8842327-8842394)
chr3 (152-220)||(9800031-9800099)
chr3 (157-225)||(15864829-15864896)
chr3 (162-226)||(45451554-45451618)
chr3 (157-220)||(1550136-1550199)
chr3 (169-224)||(4201404-4201459)
chr3 (159-226)||(7614409-7614476)
chr3 (167-225)||(11251984-11252040)
chr3 (181-232)||(11507463-11507514)
chr3 (169-220)||(16789020-16789071)
chr3 (181-224)||(35222958-35223001)
chr3 (158-220)||(28678300-28678362)
chr3 (168-214)||(29508451-29508497)
chr3 (181-226)||(2941578-2941623)
chr3 (141-190)||(3865586-3865635)
chr3 (152-213)||(11610512-11610573)
chr3 (181-226)||(13845519-13845564)
chr3 (180-225)||(15505785-15505830)
chr3 (160-220)||(750618-750678)
chr3 (181-225)||(13414489-13414533)
chr3 (169-225)||(20691327-20691383)
[»] chr2 (65 HSPs)
chr2 (141-232)||(19536385-19536477)
chr2 (140-223)||(37558956-37559039)
chr2 (161-245)||(18255955-18256039)
chr2 (141-220)||(20539674-20539753)
chr2 (161-226)||(2438713-2438778)
chr2 (141-226)||(30404844-30404929)
chr2 (147-225)||(38117154-38117232)
chr2 (141-226)||(15972853-15972938)
chr2 (167-232)||(34691793-34691858)
chr2 (167-232)||(34714205-34714270)
chr2 (152-220)||(12668423-12668491)
chr2 (141-219)||(14996224-14996303)
chr2 (147-226)||(18841007-18841086)
chr2 (157-220)||(30335413-30335476)
chr2 (147-226)||(31018576-31018655)
chr2 (141-220)||(36756344-36756423)
chr2 (141-226)||(21624246-21624332)
chr2 (141-226)||(6940235-6940320)
chr2 (140-213)||(21374706-21374779)
chr2 (159-220)||(30717530-30717591)
chr2 (141-225)||(18421943-18422027)
chr2 (157-221)||(28677905-28677968)
chr2 (128-216)||(30527599-30527687)
chr2 (158-226)||(5040729-5040799)
chr2 (157-220)||(15657860-15657923)
chr2 (168-226)||(5367199-5367257)
chr2 (161-219)||(11223864-11223922)
chr2 (147-225)||(20242722-20242800)
chr2 (142-212)||(24894370-24894440)
chr2 (158-219)||(36409630-36409689)
chr2 (141-226)||(20473302-20473387)
chr2 (181-226)||(20922922-20922967)
chr2 (141-222)||(23718006-23718087)
chr2 (141-222)||(24105678-24105759)
chr2 (141-226)||(28596452-28596534)
chr2 (161-226)||(29176487-29176552)
chr2 (160-220)||(974746-974806)
chr2 (141-220)||(23058442-23058522)
chr2 (158-226)||(37411238-37411306)
chr2 (159-219)||(42832277-42832337)
chr2 (157-212)||(21616758-21616813)
chr2 (181-220)||(34784982-34785021)
chr2 (161-220)||(44860320-44860379)
chr2 (152-218)||(18420436-18420502)
chr2 (152-206)||(21782832-21782886)
chr2 (157-219)||(26769507-26769569)
chr2 (169-226)||(5473336-5473393)
chr2 (158-219)||(18276518-18276579)
chr2 (141-218)||(31808057-31808134)
chr2 (169-226)||(40361748-40361805)
chr2 (181-225)||(8300214-8300258)
chr2 (152-220)||(33153415-33153483)
chr2 (141-196)||(34337200-34337255)
chr2 (157-226)||(31284044-31284114)
chr2 (152-225)||(896202-896275)
chr2 (152-226)||(12224212-12224288)
chr2 (161-214)||(12940941-12940994)
chr2 (141-206)||(16069268-16069333)
chr2 (163-220)||(38442309-38442366)
chr2 (165-218)||(39026822-39026875)
chr2 (160-213)||(39323263-39323316)
chr2 (168-220)||(18622613-18622665)
chr2 (167-219)||(18889592-18889644)
chr2 (169-225)||(23921261-23921317)
chr2 (157-213)||(27286299-27286355)
[»] chr7 (75 HSPs)
chr7 (147-226)||(15680795-15680874)
chr7 (147-226)||(25481888-25481967)
chr7 (141-226)||(11061070-11061155)
chr7 (147-220)||(24339628-24339701)
chr7 (167-232)||(3721099-3721164)
chr7 (123-220)||(9408334-9408432)
chr7 (142-225)||(7197292-7197375)
chr7 (161-220)||(19992001-19992060)
chr7 (159-225)||(20549789-20549855)
chr7 (160-218)||(41020495-41020553)
chr7 (159-220)||(3991322-3991383)
chr7 (147-220)||(5409836-5409909)
chr7 (158-219)||(7438703-7438764)
chr7 (181-226)||(18213027-18213072)
chr7 (141-226)||(26733284-26733369)
chr7 (123-220)||(35861926-35862023)
chr7 (161-226)||(21864806-21864873)
chr7 (141-221)||(24105658-24105738)
chr7 (157-225)||(28155566-28155634)
chr7 (141-220)||(1433434-1433513)
chr7 (159-226)||(8234144-8234211)
chr7 (161-220)||(9778500-9778559)
chr7 (152-219)||(11665441-11665508)
chr7 (157-220)||(13770687-13770750)
chr7 (157-220)||(18215186-18215249)
chr7 (167-226)||(21880158-21880217)
chr7 (165-216)||(26033465-26033516)
chr7 (141-220)||(27945021-27945100)
chr7 (169-232)||(38143231-38143294)
chr7 (141-220)||(43027469-43027548)
chr7 (167-220)||(7328691-7328744)
chr7 (169-218)||(15902830-15902879)
chr7 (161-226)||(19213803-19213868)
chr7 (147-220)||(32308106-32308179)
chr7 (180-220)||(2334269-2334309)
chr7 (161-225)||(42720885-42720949)
chr7 (167-226)||(1401031-1401090)
chr7 (157-220)||(10042933-10042996)
chr7 (159-218)||(27093415-27093474)
chr7 (159-218)||(27184827-27184886)
chr7 (181-220)||(27229311-27229350)
chr7 (112-214)||(43249950-43250046)
chr7 (157-220)||(11272586-11272651)
chr7 (160-210)||(11831431-11831481)
chr7 (157-219)||(19206046-19206108)
chr7 (147-220)||(21560484-21560562)
chr7 (152-217)||(2948674-2948739)
chr7 (157-226)||(21826269-21826338)
chr7 (157-206)||(29787383-29787432)
chr7 (181-226)||(39138464-39138509)
chr7 (171-223)||(9482944-9482996)
chr7 (180-220)||(18039018-18039058)
chr7 (152-220)||(22602710-22602778)
chr7 (160-224)||(32287459-32287523)
chr7 (157-224)||(5835243-5835310)
chr7 (169-220)||(11890919-11890970)
chr7 (169-220)||(16341504-16341555)
chr7 (141-224)||(22484005-22484088)
chr7 (142-213)||(22868023-22868094)
chr7 (157-220)||(25822651-25822714)
chr7 (162-220)||(32094020-32094079)
chr7 (160-226)||(598207-598273)
chr7 (158-220)||(5548673-5548735)
chr7 (157-227)||(23191892-23191962)
chr7 (152-226)||(33994203-33994277)
chr7 (182-219)||(640134-640171)
chr7 (181-226)||(3554500-3554545)
chr7 (159-220)||(4024025-4024086)
chr7 (169-218)||(5233637-5233686)
chr7 (147-220)||(6630912-6630985)
chr7 (148-220)||(30731024-30731094)
chr7 (168-225)||(37870900-37870957)
chr7 (159-220)||(49107819-49107879)
chr7 (168-220)||(7058433-7058485)
chr7 (168-220)||(18013074-18013126)
[»] scaffold0223 (1 HSPs)
scaffold0223 (141-220)||(20152-20231)
[»] scaffold0027 (1 HSPs)
scaffold0027 (141-232)||(46662-46752)
[»] scaffold0050 (1 HSPs)
scaffold0050 (160-226)||(70277-70343)
[»] scaffold0652 (1 HSPs)
scaffold0652 (157-226)||(456-525)
[»] scaffold0103 (1 HSPs)
scaffold0103 (140-212)||(51790-51862)
[»] scaffold0227 (1 HSPs)
scaffold0227 (157-212)||(7319-7374)
[»] scaffold0011 (1 HSPs)
scaffold0011 (161-219)||(17750-17808)
[»] scaffold0722 (1 HSPs)
scaffold0722 (160-225)||(7027-7092)
[»] scaffold0171 (2 HSPs)
scaffold0171 (141-220)||(23400-23479)
scaffold0171 (180-220)||(23530-23570)
[»] scaffold0697 (1 HSPs)
scaffold0697 (157-226)||(1640-1709)
[»] scaffold0122 (2 HSPs)
scaffold0122 (157-226)||(8006-8074)
scaffold0122 (123-220)||(8634-8725)
[»] scaffold0306 (1 HSPs)
scaffold0306 (141-221)||(13380-13460)
[»] scaffold0152 (1 HSPs)
scaffold0152 (141-221)||(21867-21947)
[»] scaffold0021 (1 HSPs)
scaffold0021 (141-217)||(130462-130538)
[»] scaffold0361 (1 HSPs)
scaffold0361 (157-226)||(14526-14592)
[»] scaffold0246 (1 HSPs)
scaffold0246 (141-212)||(19556-19626)
[»] scaffold0236 (1 HSPs)
scaffold0236 (181-220)||(25768-25807)
[»] scaffold0018 (1 HSPs)
scaffold0018 (141-219)||(178819-178898)
[»] scaffold0057 (1 HSPs)
scaffold0057 (159-205)||(24023-24069)
[»] scaffold0044 (1 HSPs)
scaffold0044 (152-217)||(53171-53236)
[»] scaffold0020 (1 HSPs)
scaffold0020 (159-220)||(135312-135373)
[»] scaffold0066 (1 HSPs)
scaffold0066 (157-205)||(33378-33426)
[»] scaffold0136 (1 HSPs)
scaffold0136 (158-220)||(3849-3911)
[»] scaffold0025 (1 HSPs)
scaffold0025 (163-220)||(23771-23829)
[»] scaffold0008 (1 HSPs)
scaffold0008 (162-220)||(263372-263430)
[»] scaffold0004 (2 HSPs)
scaffold0004 (147-213)||(92793-92859)
scaffold0004 (152-219)||(123616-123686)
[»] scaffold0793 (1 HSPs)
scaffold0793 (159-219)||(4884-4945)
[»] scaffold0007 (1 HSPs)
scaffold0007 (141-214)||(225274-225347)
[»] scaffold0036 (1 HSPs)
scaffold0036 (168-220)||(9747-9799)
[»] scaffold0019 (1 HSPs)
scaffold0019 (147-220)||(71709-71784)
[»] scaffold1528 (1 HSPs)
scaffold1528 (159-218)||(1033-1092)
[»] scaffold0123 (1 HSPs)
scaffold0123 (161-216)||(44529-44584)
[»] scaffold0083 (1 HSPs)
scaffold0083 (187-226)||(45524-45563)
[»] scaffold0049 (1 HSPs)
scaffold0049 (162-225)||(63774-63837)
[»] scaffold0450 (1 HSPs)
scaffold0450 (158-220)||(8635-8697)
[»] scaffold0086 (1 HSPs)
scaffold0086 (180-220)||(2947-2987)


Alignment Details
Target: chr5 (Bit Score: 84; Significance: 6e-40; HSPs: 65)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 30 - 117
Target Start/End: Complemental strand, 5182839 - 5182752
Alignment:
Q  30 aaatgtaataaagcaggtaaagtttggttatatatatgcagtacaagagctagcgctcctttgctagcaatggcttataatctatgaa 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  5182839 aaatgtaataaagcaggtaaagtttggttatatatatgcagtacaagagctagctctcctttgctagcaatggcttataatctatgaa 5182752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 141 - 225
Target Start/End: Complemental strand, 21191135 - 21191051
Alignment:
Q  141 gacactgacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacac 225  Q
    ||||| |||| ||||  ||||||||||||||||||||| ||||||||||||||| |||||||||| |||||||||||||||||||    
T  21191135 gacacggacactgacatgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcggacac 21191051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 152 - 226
Target Start/End: Original strand, 6247613 - 6247687
Alignment:
Q  152 tgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    |||| |||||||||| ||||||||||| ||||||||||||||| |||||||||| ||||||||||||||||||||    
T  6247613 tgacacgccgacacatctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcggacacg 6247687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 141 - 215
Target Start/End: Original strand, 14674249 - 14674323
Alignment:
Q  141 gacactgacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcgg 215  Q
    ||||| |||| |||| |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  14674249 gacacggacactgacacgccgacacagctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcgg 14674323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 152 - 225
Target Start/End: Original strand, 33178016 - 33178089
Alignment:
Q  152 tgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacac 225  Q
    |||| |||||||||| ||||||||||  |||||||||||||||||||||||||| |||||||||||||||||||    
T  33178016 tgacacgccgacacaactaataatttaaaaaaatcacataatttagtgtaattacaagtgtcggtgtcggacac 33178089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 147 - 234
Target Start/End: Original strand, 8420013 - 8420100
Alignment:
Q  147 gacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacgcctaattc 234  Q
    |||| |||| |||||||| ||||||||||||| |||||| |||||||| | |||||||| ||||||||||||||||| ||||||||||    
T  8420013 gacaatgacacgccgacatagctaataatttgaaaaaataacataattcaatgtaattacaagtgtcggtgtcggacgcgcctaattc 8420100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 171 - 226
Target Start/End: Original strand, 43564891 - 43564946
Alignment:
Q  171 ataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  43564891 ataatttggaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacg 43564946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 157 - 226
Target Start/End: Complemental strand, 21576808 - 21576739
Alignment:
Q  157 cgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    |||| ||||||||||||||||| ||||||||||||||| |||||||||| |||||||| |||||||||||    
T  21576808 cgccaacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcgatgtcggacacg 21576739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 157 - 220
Target Start/End: Original strand, 19579697 - 19579760
Alignment:
Q  157 cgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    ||||||||||||||||||||||  ||||||||||||||||||| ||||| ||||||||||||||    
T  19579697 cgccgacacagctaataatttgagaaaatcacataatttagtgcaattacaagtgtcggtgtcg 19579760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 141 - 208
Target Start/End: Original strand, 22013394 - 22013461
Alignment:
Q  141 gacactgacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataa 208  Q
    ||||| |||| |||| |||||||||||||||||||||| |||||| ||||||||||||||||||||||    
T  22013394 gacacggacactgacacgccgacacagctaataatttggaaaaattacataatttagtgtaattataa 22013461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 158 - 224
Target Start/End: Complemental strand, 16203857 - 16203791
Alignment:
Q  158 gccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggaca 224  Q
    |||||||| ||||||||||||  |||||| |||||||||||||||||||| ||||||||||||||||    
T  16203857 gccgacactgctaataatttgagaaaatctcataatttagtgtaattatatgtgtcggtgtcggaca 16203791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 152 - 226
Target Start/End: Complemental strand, 28588742 - 28588668
Alignment:
Q  152 tgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    |||| ||||||||| | ||||||||||  |||||||||||||| |||||||||||| ||||||||||||||||||    
T  28588742 tgacacgccgacaccggtaataatttgagaaaatcacataattcagtgtaattataggtgtcggtgtcggacacg 28588668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 159 - 225
Target Start/End: Original strand, 42893358 - 42893424
Alignment:
Q  159 ccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacac 225  Q
    |||||||||||||||||||| ||||||||||||||  |||||||||| ||||||||||||| |||||    
T  42893358 ccgacacagctaataatttgaaaaaatcacataatccagtgtaattacaagtgtcggtgtcagacac 42893424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 159 - 220
Target Start/End: Original strand, 7677703 - 7677764
Alignment:
Q  159 ccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    |||||||||||||||||||| ||||||||||||||| |||| ||||| ||||||||||||||    
T  7677703 ccgacacagctaataatttgaaaaaatcacataattcagtgcaattagaagtgtcggtgtcg 7677764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 133 - 226
Target Start/End: Original strand, 15883957 - 15884053
Alignment:
Q  133 atgacatggacactgacag--tgacgcgccgacacagctaataatttgcaaaa-atcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    ||||||| |||||||||||  |||  |||||||||||| ||||||||  |||| ||||||||||| |||||||||| ||||||||||||||||||||    
T  15883957 atgacatagacactgacaggttgaaacgccgacacagcaaataatttaaaaaaaatcacataattcagtgtaattacaagtgtcggtgtcggacacg 15884053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 147 - 220
Target Start/End: Original strand, 31084309 - 31084382
Alignment:
Q  147 gacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    |||| |||| |||||||||||||||||||||| ||||||||||||||| | |||||||| |||||||| |||||    
T  31084309 gacactgacacgccgacacagctaataatttgaaaaaatcacataattcaatgtaattacaagtgtcgatgtcg 31084382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 147 - 220
Target Start/End: Original strand, 39698527 - 39698600
Alignment:
Q  147 gacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    |||| |||| ||| |||||||||||||||||| ||||||||||||||| |||||||||| ||||||| ||||||    
T  39698527 gacactgacacgctgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcagtgtcg 39698600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 141 - 220
Target Start/End: Original strand, 21522730 - 21522809
Alignment:
Q  141 gacactgacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    ||||| |||| |||| |||||||||||||||||||||  |||||| |||||||| |||||||||| || |||||||||||    
T  21522730 gacacggacactgacacgccgacacagctaataattttaaaaaataacataattcagtgtaattacaattgtcggtgtcg 21522809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 141 - 220
Target Start/End: Original strand, 21533296 - 21533375
Alignment:
Q  141 gacactgacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    ||||| |||| |||| |||||||||||||||||||||  |||||| |||||||| |||||||||| || |||||||||||    
T  21533296 gacacggacactgacacgccgacacagctaataattttaaaaaataacataattcagtgtaattacaattgtcggtgtcg 21533375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 139 - 213
Target Start/End: Original strand, 27144441 - 27144515
Alignment:
Q  139 tggacactgacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtc 213  Q
    ||||||| |||| |||| ||||||||| ||||||||||||   |||||||||||||||||||||||||| |||||    
T  27144441 tggacacagacactgacacgccgacaccgctaataatttgaggaaatcacataatttagtgtaattatatgtgtc 27144515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 141 - 219
Target Start/End: Complemental strand, 36642841 - 36642763
Alignment:
Q  141 gacactgacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtc 219  Q
    ||||| |||| |||| ||||||||||| |||||||||| |||| | ||||| |||||||||| ||||||||||||||||    
T  36642841 gacacggacactgacacgccgacacagttaataatttgaaaaagtgacatattttagtgtaaatataagtgtcggtgtc 36642763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 147 - 220
Target Start/End: Original strand, 2436908 - 2436981
Alignment:
Q  147 gacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    |||| |||| ||||||||| ||||||||||||||||||||||||||||   ||| |||||| ||||||||||||    
T  2436908 gacactgacacgccgacaccgctaataatttgcaaaaatcacataattcgttgtgattatatgtgtcggtgtcg 2436981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 160 - 220
Target Start/End: Complemental strand, 13287459 - 13287399
Alignment:
Q  160 cgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    |||||||| |||||||||| ||||||||||||||| ||||||| || ||||||||||||||    
T  13287459 cgacacagataataatttgaaaaaatcacataattcagtgtaactacaagtgtcggtgtcg 13287399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 159 - 226
Target Start/End: Original strand, 14422902 - 14422967
Alignment:
Q  159 ccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    |||| ||||||||||||||  ||||||||||||||| ||||||||||||||| ||| |||||||||||    
T  14422902 ccgatacagctaataattt--aaaaatcacataattcagtgtaattataagtttcgatgtcggacacg 14422967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 141 - 220
Target Start/End: Complemental strand, 19552622 - 19552545
Alignment:
Q  141 gacactgacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    ||||| |||| |||| ||||||||||| |||||||||| ||||||||||||||| ||||||  ||||||||||| |||||    
T  19552622 gacacggacactgacacgccgacacagttaataatttgaaaaaatcacataattaagtgta--tataagtgtcgatgtcg 19552545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 162 - 226
Target Start/End: Complemental strand, 30502446 - 30502382
Alignment:
Q  162 acacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    |||| ||||||||||||  |||||||| ||||| |||||||||||| ||||||||||||||||||    
T  30502446 acaccgctaataatttgagaaaatcacttaattcagtgtaattatatgtgtcggtgtcggacacg 30502382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 162 - 226
Target Start/End: Complemental strand, 30542789 - 30542725
Alignment:
Q  162 acacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    |||| ||||||||||||  |||||||| ||||| |||||||||||| ||||||||||||||||||    
T  30542789 acaccgctaataatttgagaaaatcacttaattcagtgtaattatatgtgtcggtgtcggacacg 30542725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 141 - 221
Target Start/End: Original strand, 15382457 - 15382539
Alignment:
Q  141 gacactgacagtgacgcgccgacacagctaataatttg--caaaaatcacataatttagtgtaattataagtgtcggtgtcgg 221  Q
    ||||| |||| |||| ||||||||||||||||||||||   |||||||| |||||| ||| |||||| |||||||||||||||    
T  15382457 gacacggacaatgacacgccgacacagctaataatttgaaaaaaaatcatataattcagtataattacaagtgtcggtgtcgg 15382539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 158 - 220
Target Start/End: Original strand, 3966500 - 3966562
Alignment:
Q  158 gccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    |||||||| ||||||||||||  ||||||||| |||| |||||||||||| ||||||||||||    
T  3966500 gccgacaccgctaataatttgagaaaatcacacaattcagtgtaattatatgtgtcggtgtcg 3966562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 158 - 220
Target Start/End: Original strand, 11685936 - 11685998
Alignment:
Q  158 gccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    |||||||| ||||||||||||  ||| || |||||||||||||||||||| ||||||||||||    
T  11685936 gccgacaccgctaataatttgagaaagtcgcataatttagtgtaattatatgtgtcggtgtcg 11685998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 162 - 220
Target Start/End: Original strand, 36838544 - 36838602
Alignment:
Q  162 acacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    |||| ||||||||||||  ||||| ||||||||||||||||||||| ||||||||||||    
T  36838544 acaccgctaataatttgagaaaattacataatttagtgtaattatatgtgtcggtgtcg 36838602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 159 - 220
Target Start/End: Complemental strand, 37328905 - 37328844
Alignment:
Q  159 ccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    |||||||||| ||||||||| |||||||||| |||| |||||||||| | ||||||||||||    
T  37328905 ccgacacagcaaataatttgtaaaaatcacaaaattcagtgtaattacatgtgtcggtgtcg 37328844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 159 - 220
Target Start/End: Original strand, 41633733 - 41633794
Alignment:
Q  159 ccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    |||||||||||||||||||| |||| | |||||||| |||||||||| || |||||||||||    
T  41633733 ccgacacagctaataatttgaaaaatttacataattcagtgtaattacaaatgtcggtgtcg 41633794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 159 - 219
Target Start/End: Complemental strand, 21351966 - 21351906
Alignment:
Q  159 ccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtc 219  Q
    |||||||| ||||||||| | |||| |||||||||| |||||||||| |||||||||||||    
T  21351966 ccgacacaactaataattggaaaaagtcacataattcagtgtaattacaagtgtcggtgtc 21351906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 160 - 224
Target Start/End: Original strand, 23220982 - 23221046
Alignment:
Q  160 cgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggaca 224  Q
    |||||| ||||||||||||  |||||||||||||||||||| || ||| |||||||||| |||||    
T  23220982 cgacaccgctaataatttgataaaatcacataatttagtgttatcatatgtgtcggtgttggaca 23221046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 161 - 220
Target Start/End: Complemental strand, 6471948 - 6471889
Alignment:
Q  161 gacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    ||||| ||||||||||||  |||||||||||||| |||||||||||| |||| |||||||    
T  6471948 gacacggctaataatttgagaaaatcacataattcagtgtaattatatgtgtgggtgtcg 6471889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 157 - 220
Target Start/End: Original strand, 10298565 - 10298628
Alignment:
Q  157 cgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    |||||||||| ||||||||||| |||| |||||||||  | |||||||| ||||||||||||||    
T  10298565 cgccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcggtgtcg 10298628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 141 - 220
Target Start/End: Original strand, 21542010 - 21542089
Alignment:
Q  141 gacactgacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    ||||| |||| ||||  ||||||||| ||||||||||  ||| || |||||||| |||||||||| ||||||||||||||    
T  21542010 gacacagacattgacatgccgacacaactaataatttaaaaagataacataattcagtgtaattacaagtgtcggtgtcg 21542089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 167 - 226
Target Start/End: Complemental strand, 23012461 - 23012402
Alignment:
Q  167 gctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    ||||||||||||  ||||||| |||||||| |||||||||| |||||||||| |||||||    
T  23012461 gctaataatttgagaaaatcatataatttaatgtaattatatgtgtcggtgttggacacg 23012402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 157 - 218
Target Start/End: Complemental strand, 17177086 - 17177025
Alignment:
Q  157 cgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgt 218  Q
    |||| ||||||||||||||||| |||||||| | |||| | |||||||| ||||||||||||    
T  17177086 cgccaacacagctaataatttgaaaaaatcaaaaaattcattgtaattacaagtgtcggtgt 17177025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 161 - 226
Target Start/End: Complemental strand, 18421900 - 18421835
Alignment:
Q  161 gacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    ||||| ||| ||||||||  |||||||||||||  |||||||||||| ||||||| ||||||||||    
T  18421900 gacactgctgataatttgagaaaatcacataatccagtgtaattatatgtgtcggcgtcggacacg 18421835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 141 - 225
Target Start/End: Complemental strand, 19820473 - 19820391
Alignment:
Q  141 gacactgacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacac 225  Q
    ||||| |||| |||| | ||||||| ||||||||||||  |||||||  ||||| |||  |||||||||||||||||||||||||    
T  19820473 gacacggacactgacactccgacaccgctaataatttgagaaaatca--taattaagtacaattataagtgtcggtgtcggacac 19820391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 157 - 226
Target Start/End: Original strand, 27932231 - 27932300
Alignment:
Q  157 cgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    ||||||||| ||||||||||||  ||||| |||||||| |||||||||| || | | |||||||||||||    
T  27932231 cgccgacaccgctaataatttgagaaaattacataattcagtgtaattacaaatcttggtgtcggacacg 27932300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 141 - 217
Target Start/End: Original strand, 41995451 - 41995525
Alignment:
Q  141 gacactgacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtg 217  Q
    ||||| |||| |||| |||||||||| ||||||||| | ||||||||||||||| | ||||||  ||||||||||||    
T  41995451 gacacagacactgacacgccgacacaactaataattcgaaaaaatcacataattcaatgtaat--taagtgtcggtg 41995525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 160 - 217
Target Start/End: Original strand, 43001799 - 43001856
Alignment:
Q  160 cgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtg 217  Q
    |||||| |||||||||||| |||||| |||||||| |||||||||| |||||| ||||    
T  43001799 cgacactgctaataatttgaaaaaattacataattcagtgtaattacaagtgttggtg 43001856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 225
Target Start/End: Original strand, 2548407 - 2548451
Alignment:
Q  181 aaaatcacataatttagtgtaattataagtgtcggtgtcggacac 225  Q
    ||||| |||||||| |||||||| |||||||||||||||||||||    
T  2548407 aaaattacataattcagtgtaatcataagtgtcggtgtcggacac 2548451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 160 - 216
Target Start/End: Complemental strand, 7218327 - 7218271
Alignment:
Q  160 cgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggt 216  Q
    ||||| ||||||||||||  | ||||||||||||| |||||||||| ||||||||||    
T  7218327 cgacagagctaataatttaaataaatcacataattcagtgtaattacaagtgtcggt 7218271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 219
Target Start/End: Original strand, 14873527 - 14873575
Alignment:
Q  171 ataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtc 219  Q
    ||||||||  |||| |||||||||||||||||||||| |||||||||||    
T  14873527 ataatttgagaaaagcacataatttagtgtaattatatgtgtcggtgtc 14873575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 168 - 220
Target Start/End: Original strand, 40131628 - 40131680
Alignment:
Q  168 ctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    ||||||||||| ||||||||||||||| ||| ||||||||| | |||||||||    
T  40131628 ctaataatttgaaaaaatcacataattcagtttaattataaatatcggtgtcg 40131680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 161 - 220
Target Start/End: Complemental strand, 5894892 - 5894833
Alignment:
Q  161 gacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    |||||| ||||||||||| |||||||| |||||||| | ||| || ||||||||||||||    
T  5894892 gacacaactaataatttgaaaaaatcatataatttaatctaactacaagtgtcggtgtcg 5894833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 157 - 219
Target Start/End: Original strand, 30135309 - 30135372
Alignment:
Q  157 cgccgacacagctaataatttgcaaaa-atcacataatttagtgtaattataagtgtcggtgtc 219  Q
    |||||||||| ||||||||||| |||| ||||||||| | | |||||||| |||||||||||||    
T  30135309 cgccgacacaactaataatttgaaaaaaatcacataactcattgtaattacaagtgtcggtgtc 30135372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 168 - 207
Target Start/End: Original strand, 35017044 - 35017083
Alignment:
Q  168 ctaataatttgcaaaaatcacataatttagtgtaattata 207  Q
    |||||||||||  |||||||||||||||||||||||||||    
T  35017044 ctaataatttgagaaaatcacataatttagtgtaattata 35017083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 161 - 220
Target Start/End: Complemental strand, 41091316 - 41091257
Alignment:
Q  161 gacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    ||||| |||||| |||||  |||||||||||||| |||||||||||| |||||| |||||    
T  41091316 gacactgctaatgatttgagaaaatcacataattcagtgtaattatatgtgtcgatgtcg 41091257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 213
Target Start/End: Original strand, 17088267 - 17088337
Alignment:
Q  144 actgacagtgacgcgccgacacagctaataatttgcaaaa-atcacataatttagtgtaattataagtgtc 213  Q
    |||||||| ||| | | |||||| ||||||||||| |||| ||||||||||||||||| |||| |||||||    
T  17088267 actgacagggacacactgacacatctaataatttgaaaaaaatcacataatttagtgtgattacaagtgtc 17088337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 220
Target Start/End: Original strand, 30183546 - 30183608
Alignment:
Q  158 gccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    ||||||||| ||||||||||| ||| ||||||| |||  || |||||| ||||||||||||||    
T  30183546 gccgacacaactaataatttgaaaatatcacattattcggtttaattacaagtgtcggtgtcg 30183608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 243 - 285
Target Start/End: Complemental strand, 5182659 - 5182613
Alignment:
Q  243 tccattattgggtggtgagtggat----atactcatcattacaacaa 285  Q
    ||||||||||||||||||||||||    |||||||||||||||||||    
T  5182659 tccattattgggtggtgagtggatggatatactcatcattacaacaa 5182613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 214
Target Start/End: Complemental strand, 5468029 - 5467984
Alignment:
Q  169 taataatttgcaaaaatcacataatttagtgtaattataagtgtcg 214  Q
    ||||||||||  |||||||||||||| |||||||||||| ||||||    
T  5468029 taataatttgataaaatcacataattcagtgtaattataggtgtcg 5467984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 220
Target Start/End: Original strand, 6035469 - 6035541
Alignment:
Q  147 gacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    |||| |||| ||||||||| |||||||||||| | |||| | |||||| ||||||||||||  |||||||||||    
T  6035469 gacactgacacgccgacaccgctaataatttg-agaaataatataattcagtgtaattatatttgtcggtgtcg 6035541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 224
Target Start/End: Original strand, 12927660 - 12927717
Alignment:
Q  167 gctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggaca 224  Q
    ||||||||||||  ||||||| |||||||||||||||||||  |||| ||||| ||||    
T  12927660 gctaataatttgagaaaatcatataatttagtgtaattatatatgtcagtgtcagaca 12927717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 226
Target Start/End: Original strand, 34879346 - 34879415
Alignment:
Q  157 cgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    ||||| ||| ||||| ||||||  ||||||| |||||| |||||||| ||| |||||| |||||||||||    
T  34879346 cgccggcaccgctaaaaatttgagaaaatcatataattcagtgtaataatatgtgtcgatgtcggacacg 34879415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 226
Target Start/End: Original strand, 42029772 - 42029817
Alignment:
Q  181 aaaatcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    |||||||||||||| | |||||||||| || |||||||||||||||    
T  42029772 aaaatcacataattcaatgtaattatatgtatcggtgtcggacacg 42029817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 216
Target Start/End: Original strand, 12159951 - 12160007
Alignment:
Q  160 cgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggt 216  Q
    ||||||| ||||||||||  ||||| ||||||||||| |||||||| || |||||||    
T  12159951 cgacacaactaataatttaaaaaaaacacataatttaatgtaattacaaatgtcggt 12160007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 161 - 213
Target Start/End: Complemental strand, 15405114 - 15405062
Alignment:
Q  161 gacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtc 213  Q
    |||||| ||||||||||| |||||||| |||||| | |||||||| |||||||    
T  15405114 gacacaactaataatttgaaaaaatcatataattcaatgtaattacaagtgtc 15405062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 170 - 226
Target Start/End: Original strand, 26312778 - 26312834
Alignment:
Q  170 aataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    |||||||||  |||||||  ||||| |||||||||||| || |||||||||||||||    
T  26312778 aataatttgagaaaatcaattaattcagtgtaattatatgtatcggtgtcggacacg 26312834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 220
Target Start/End: Original strand, 39205879 - 39205939
Alignment:
Q  160 cgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    |||||| ||||||||||||  ||||||| ||||||  ||||||||||| |||| |||||||    
T  39205879 cgacactgctaataatttgagaaaatcatataattaggtgtaattatatgtgttggtgtcg 39205939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 108 - 220
Target Start/End: Original strand, 241547 - 241653
Alignment:
Q  108 aatctatgaagcactgacaccgaacatgacatggacactgacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattata 207  Q
    |||||||||||||| ||||||| ||| |||| |||||||||||      |||||||||||||||||||||| |||||||||||||||||||||||||||     
T  241547 aatctatgaagcacggacaccggacacgacacggacactgaca------cgccgacacagctaataatttggaaaaatcacataatttagtgtaattatg 241640  T
Q  208 agtgtcggtgtcg 220  Q
    |||||||||||||    
T  241641 agtgtcggtgtcg 241653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 63; Significance: 2e-27; HSPs: 92)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 17841669 - 17841583
Alignment:
Q  140 ggacactgacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    |||||| |||| |||| |||||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||||||    
T  17841669 ggacacggacactgacacgccgacacagctaataatttgaaaaaatcacataatttagtgtaattacaagtgacggtgtcggacacg 17841583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 141 - 232
Target Start/End: Complemental strand, 426593 - 426502
Alignment:
Q  141 gacactgacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacgcctaat 232  Q
    ||||| |||| |||| ||||||||||| |||||||||| ||||||||||||||| | |||||||| ||||||||||||||||||||||||||    
T  426593 gacacggacactgacacgccgacacagttaataatttgaaaaaatcacataattaaatgtaattacaagtgtcggtgtcggacacgcctaat 426502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 123 - 225
Target Start/End: Original strand, 7938084 - 7938180
Alignment:
Q  123 gacaccgaacatgacatggacactgacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcgga 222  Q
    ||||||| ||| ||||||||||||||||      |||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| ||    
T  7938084 gacaccggacacgacatggacactgaca------cgccgacacagctaataatttgaaaaaatcatataatttagtgtaattataagtgtcggtgtccga 7938177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 141 - 226
Target Start/End: Original strand, 34595114 - 34595199
Alignment:
Q  141 gacactgacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    ||||| |||| |||| |||||||||| ||||||||||| ||||||||||||||| |||||||||| ||||||||||||||||||||    
T  34595114 gacacggacaatgacacgccgacacaactaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcggacacg 34595199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 138 - 226
Target Start/End: Original strand, 28152076 - 28152163
Alignment:
Q  138 atggacactgacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    |||||||| |||| |||| |||||||| ||||||||||||| ||||||||||||||| |||||||||| ||||||||||||||||||||    
T  28152076 atggacacggacactgacacgccgacaaagctaataatttg-aaaaatcacataattcagtgtaattacaagtgtcggtgtcggacacg 28152163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 123 - 220
Target Start/End: Original strand, 16766665 - 16766756
Alignment:
Q  123 gacaccgaacatgacatggacactgacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    ||||||| ||| ||||||||||||||||      |||||||||||||||||||||| ||||||||||||||| |||||||||| ||||||||||||||    
T  16766665 gacaccggacacgacatggacactgaca------cgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcg 16766756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 147 - 232
Target Start/End: Complemental strand, 5732583 - 5732498
Alignment:
Q  147 gacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacgcctaat 232  Q
    |||| |||| ||||||||| | ||||||||||  ||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  5732583 gacactgacacgccgacaccgttaataatttgagaaaatcacatattttagtgtaattatatgtgtcggtgtcggacacgcctaat 5732498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 152 - 225
Target Start/End: Complemental strand, 7977898 - 7977825
Alignment:
Q  152 tgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacac 225  Q
    |||| |||||||||||||||||||||| |||||| |||||||| |||||||||| |||||||||||||||||||    
T  7977898 tgacacgccgacacagctaataatttgaaaaaattacataattcagtgtaattacaagtgtcggtgtcggacac 7977825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 152 - 226
Target Start/End: Complemental strand, 33001357 - 33001283
Alignment:
Q  152 tgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    |||| ||||||||| |||||||||||| ||||||||||||||| | |||||||||| ||||||||||||||||||    
T  33001357 tgacacgccgacactgctaataatttgaaaaaatcacataattaaatgtaattatatgtgtcggtgtcggacacg 33001283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 141 - 226
Target Start/End: Complemental strand, 8777052 - 8776967
Alignment:
Q  141 gacactgacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    ||||| |||| |||| |||||||||| ||||||||||| |||||||||| |||| |||||||||| |||||| |||||||||||||    
T  8777052 gacacggacactgacacgccgacacaactaataatttgaaaaaatcacaaaattcagtgtaattacaagtgttggtgtcggacacg 8776967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 157 - 232
Target Start/End: Complemental strand, 7801219 - 7801143
Alignment:
Q  157 cgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtc-ggacacgcctaat 232  Q
    |||||||||| ||||||||||| ||||||||||||||| || ||||||| ||||||||||||| |||||||||||||    
T  7801219 cgccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcgggacacgcctaat 7801143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 141 - 220
Target Start/End: Original strand, 3398599 - 3398677
Alignment:
Q  141 gacactgacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    ||||| |||| |||| |||||||||||||||||||||| |||||||| |||||| ||||||||||||||| |||||||||    
T  3398599 gacacggacactgacacgccgacacagctaataatttg-aaaaatcatataattcagtgtaattataagtatcggtgtcg 3398677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 157 - 220
Target Start/End: Complemental strand, 9107433 - 9107370
Alignment:
Q  157 cgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    |||||||||||||||||||||| |||||||||| |||| |||||||||| ||||||||||||||    
T  9107433 cgccgacacagctaataatttgaaaaaatcacaaaattcagtgtaattacaagtgtcggtgtcg 9107370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 141 - 220
Target Start/End: Original strand, 12696304 - 12696383
Alignment:
Q  141 gacactgacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    ||||| |||| |||| |||||||||||||||||||||| |||||| |||||||| |||||||||| ||||||| ||||||    
T  12696304 gacacggacactgacacgccgacacagctaataatttgaaaaaattacataattcagtgtaattacaagtgtcagtgtcg 12696383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 152 - 222
Target Start/End: Complemental strand, 853927 - 853857
Alignment:
Q  152 tgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcgga 222  Q
    |||| |||||||||| ||||||||||| ||||||||||||||| |||| ||||| ||||||||||||||||    
T  853927 tgacacgccgacacaactaataatttgaaaaaatcacataattaagtgcaattacaagtgtcggtgtcgga 853857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 141 - 226
Target Start/End: Original strand, 4877922 - 4878008
Alignment:
Q  141 gacactgacagtgacgcgccgacacagctaataatttgcaaaaa-tcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    ||||| || |||||| | |||||||||||||||||||| ||||| |||||||||| ||| |||||| ||||||||||||||||||||    
T  4877922 gacacggatagtgacacaccgacacagctaataatttgaaaaaagtcacataattaagtataattacaagtgtcggtgtcggacacg 4878008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 147 - 225
Target Start/End: Complemental strand, 7265666 - 7265588
Alignment:
Q  147 gacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacac 225  Q
    |||| |||| |||| |||| ||||||||||||  |||||||||||||| |||||||||||| |||||||||||||||||    
T  7265666 gacactgacacgccaacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtgtcggtgtcggacac 7265588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 152 - 226
Target Start/End: Original strand, 19040343 - 19040417
Alignment:
Q  152 tgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    |||| ||||||||| ||||||||||||  |||||||||||||| |||||||||||| ||||| ||||||||||||    
T  19040343 tgacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtgtctgtgtcggacacg 19040417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 157 - 226
Target Start/End: Complemental strand, 32978963 - 32978893
Alignment:
Q  157 cgccgacacagctaataatttgcaaaaat-cacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    |||||||||||||||||||||| |||||  ||||||||| |||||||||| ||||||||||||||||||||    
T  32978963 cgccgacacagctaataatttgaaaaaaaacacataattaagtgtaattacaagtgtcggtgtcggacacg 32978893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 169 - 226
Target Start/End: Complemental strand, 403915 - 403858
Alignment:
Q  169 taataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    |||||||||| ||||||||||||||||||||||| || ||||||||||||||||||||    
T  403915 taataatttgaaaaaatcacataatttagtgtaactacaagtgtcggtgtcggacacg 403858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 157 - 221
Target Start/End: Original strand, 3209377 - 3209442
Alignment:
Q  157 cgccgacacagctaataatttgcaaaa-atcacataatttagtgtaattataagtgtcggtgtcgg 221  Q
    |||||||||||||||||||||| |||| ||||||||||||||||| |||| |||||||||||||||    
T  3209377 cgccgacacagctaataatttgaaaaaaatcacataatttagtgttattacaagtgtcggtgtcgg 3209442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 147 - 220
Target Start/End: Complemental strand, 10770747 - 10770674
Alignment:
Q  147 gacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    |||| |||| |||| ||||| ||||||||||| ||||||||||||||| |||||||||| ||||||||||||||    
T  10770747 gacactgacacgccaacacaactaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcg 10770674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 141 - 218
Target Start/End: Original strand, 16833288 - 16833365
Alignment:
Q  141 gacactgacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgt 218  Q
    ||||| |||| |||| |||||||||| ||||||||||| |||||||||||| || |||||||||| ||||||||||||    
T  16833288 gacacagacactgacacgccgacacaactaataatttgaaaaaatcacatacttcagtgtaattacaagtgtcggtgt 16833365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 161 - 226
Target Start/End: Original strand, 28715295 - 28715360
Alignment:
Q  161 gacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    ||||| |||||||||||| |||||| |||||||| |||||||||| ||||||||||||||||||||    
T  28715295 gacacggctaataatttgaaaaaatgacataattcagtgtaattacaagtgtcggtgtcggacacg 28715360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 154 - 226
Target Start/End: Complemental strand, 1191766 - 1191694
Alignment:
Q  154 acgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    ||||||||||||||||||||||||| |||| ||||| |||| |||||||||| |||||||| ||| |||||||    
T  1191766 acgcgccgacacagctaataatttgaaaaattcacaaaattcagtgtaattacaagtgtcgatgttggacacg 1191694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 141 - 220
Target Start/End: Complemental strand, 8365598 - 8365519
Alignment:
Q  141 gacactgacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    ||||| |||| |||| |||||||||| ||||||||||| ||| |||||||||||  ||||||||| ||||||||||||||    
T  8365598 gacacggacactgacacgccgacacaactaataatttgaaaatatcacataattcggtgtaattacaagtgtcggtgtcg 8365519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 135 - 214
Target Start/End: Original strand, 10842506 - 10842585
Alignment:
Q  135 gacatggacactgacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcg 214  Q
    |||| ||||| |||||  ||| ||||||||| |||||||||||| |||||||||||||||||||||||| ||| ||||||    
T  10842506 gacacggacattgacacggacacgccgacaccgctaataatttgaaaaaatcacataatttagtgtaatcatatgtgtcg 10842585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 140 - 232
Target Start/End: Complemental strand, 20371190 - 20371098
Alignment:
Q  140 ggacactgacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacgcctaat 232  Q
    |||||| |||| |||| ||||||||| ||||||||||||  |||||||||||| | | ||| |||||| |||||||||||| ||| |||||||    
T  20371190 ggacacggacattgacacgccgacaccgctaataatttgagaaaatcacataactcaatgtgattatatgtgtcggtgtcgaacaagcctaat 20371098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 157 - 225
Target Start/End: Complemental strand, 21924998 - 21924930
Alignment:
Q  157 cgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacac 225  Q
    ||||||||| ||||||||||||  || |||| |||||| |||||||||||| |||||||||||||||||    
T  21924998 cgccgacactgctaataatttgagaatatcaaataattcagtgtaattatatgtgtcggtgtcggacac 21924930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 147 - 226
Target Start/End: Complemental strand, 6898354 - 6898275
Alignment:
Q  147 gacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    |||| |||| ||| |||||  ||||||||||| | |||| |||||||| |||||||||| ||||||||||||||||||||    
T  6898354 gacactgacacgctgacacgtctaataatttgaacaaattacataattaagtgtaattacaagtgtcggtgtcggacacg 6898275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 167 - 218
Target Start/End: Original strand, 7086801 - 7086852
Alignment:
Q  167 gctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgt 218  Q
    ||||||||||||  ||||||||||||||||||||||||||| ||||||||||    
T  7086801 gctaataatttgagaaaatcacataatttagtgtaattatatgtgtcggtgt 7086852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 159 - 226
Target Start/End: Original strand, 7377977 - 7378044
Alignment:
Q  159 ccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    ||||||| ||||| ||||||  |||||||||||||| | |||||||||| ||||||||||||||||||    
T  7377977 ccgacaccgctaaaaatttgagaaaatcacataattcaatgtaattatatgtgtcggtgtcggacacg 7378044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 161 - 220
Target Start/End: Complemental strand, 9025553 - 9025494
Alignment:
Q  161 gacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    ||||| ||||||||||||  |||||||||||||| |||||||||||| ||||||||||||    
T  9025553 gacactgctaataatttgagaaaatcacataattcagtgtaattatatgtgtcggtgtcg 9025494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 141 - 220
Target Start/End: Original strand, 9027158 - 9027237
Alignment:
Q  141 gacactgacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    ||||| |||| |||| ||||||||| ||||||||||||  | ||||||||||||  ||||||||||| ||||||||||||    
T  9027158 gacacggacactgacacgccgacaccgctaataatttgagataatcacataattccgtgtaattatatgtgtcggtgtcg 9027237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 152 - 215
Target Start/End: Original strand, 31959150 - 31959213
Alignment:
Q  152 tgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcgg 215  Q
    |||| ||||| |||||||||||||||| ||||||||||||||  |||||||||| |||||||||    
T  31959150 tgacacgccgtcacagctaataatttgaaaaaatcacataatgcagtgtaattacaagtgtcgg 31959213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 171 - 225
Target Start/End: Original strand, 1700362 - 1700416
Alignment:
Q  171 ataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacac 225  Q
    |||||||  |||||||||||| || ||||||||||||||||||||||||||||||    
T  1700362 ataatttaaaaaaatcacatatttcagtgtaattataagtgtcggtgtcggacac 1700416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 158 - 220
Target Start/End: Original strand, 7930302 - 7930364
Alignment:
Q  158 gccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    |||||||||  |||||||||| |||||||||||||||||||| ||||  ||||||||||||||    
T  7930302 gccgacacaattaataatttgaaaaaatcacataatttagtgaaatttcaagtgtcggtgtcg 7930364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 141 - 231
Target Start/End: Original strand, 13851716 - 13851806
Alignment:
Q  141 gacactgacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacgcctaa 231  Q
    ||||| |||| |||| || |||||| ||||||||||||  ||||| || ||||| |||||||||||| |||||| |||| |||||||||||    
T  13851716 gacacggacactgacacgtcgacaccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtctgacacgcctaa 13851806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 157 - 214
Target Start/End: Original strand, 1681754 - 1681811
Alignment:
Q  157 cgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcg 214  Q
    |||||||||| ||||||||||| ||||||||| ||||| |||||||||| ||||||||    
T  1681754 cgccgacacaactaataatttgaaaaaatcacgtaattcagtgtaattacaagtgtcg 1681811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 152 - 221
Target Start/End: Original strand, 9629374 - 9629443
Alignment:
Q  152 tgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcgg 221  Q
    |||| ||||||||| || |||||||||  |||||||||||||| | |||||||||| |||||||||||||    
T  9629374 tgacacgccgacaccgccaataatttgagaaaatcacataattcaatgtaattatatgtgtcggtgtcgg 9629443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 141 - 218
Target Start/End: Original strand, 9658859 - 9658936
Alignment:
Q  141 gacactgacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgt 218  Q
    ||||| |||| |||| ||||||||| |||||||||||   |||||||||||||| ||||||||||||  |||||||||    
T  9658859 gacacggacactgacacgccgacaccgctaataatttaagaaaatcacataattcagtgtaattatatttgtcggtgt 9658936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 152 - 213
Target Start/End: Complemental strand, 17341732 - 17341671
Alignment:
Q  152 tgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtc 213  Q
    |||| ||||||||| | ||||||||||  |||||||||||||| ||||||||||||||||||    
T  17341732 tgacacgccgacaccgttaataatttgataaaatcacataattcagtgtaattataagtgtc 17341671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 161 - 222
Target Start/End: Complemental strand, 32511725 - 32511664
Alignment:
Q  161 gacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcgga 222  Q
    ||||| |||||||||||   |||||||||||||| ||||||||||||||||| |||||||||    
T  32511725 gacaccgctaataatttaagaaaatcacataattcagtgtaattataagtgttggtgtcgga 32511664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 160 - 220
Target Start/End: Complemental strand, 5970168 - 5970108
Alignment:
Q  160 cgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    |||||||| |||||||||| ||||||||||||||| |||||||||| || ||| |||||||    
T  5970168 cgacacagttaataatttgaaaaaatcacataattcagtgtaattacaaatgtgggtgtcg 5970108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 180 - 232
Target Start/End: Original strand, 7027261 - 7027312
Alignment:
Q  180 aaaaatcacataatttagtgtaattataagtgtcggtgtcggacacgcctaat 232  Q
    ||||||||||||||| |||||||||||| ||||||||||| ||||||||||||    
T  7027261 aaaaatcacataattcagtgtaattatatgtgtcggtgtc-gacacgcctaat 7027312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 168 - 220
Target Start/End: Original strand, 7151419 - 7151471
Alignment:
Q  168 ctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    ||||||||||| ||||||||||||||| |||||||||||| |||| |||||||    
T  7151419 ctaataatttgaaaaaatcacataattaagtgtaattatatgtgttggtgtcg 7151471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 168 - 220
Target Start/End: Complemental strand, 9195806 - 9195754
Alignment:
Q  168 ctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    |||||||||||  ||||| ||||||||||||||||||||| ||||||||||||    
T  9195806 ctaataatttgagaaaatgacataatttagtgtaattatatgtgtcggtgtcg 9195754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 168 - 220
Target Start/End: Original strand, 31384927 - 31384979
Alignment:
Q  168 ctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    ||||||||||| ||||||||||||||| |||||||||| ||||||| ||||||    
T  31384927 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcagtgtcg 31384979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 162 - 220
Target Start/End: Complemental strand, 9911587 - 9911528
Alignment:
Q  162 acacagctaataatttgcaa-aaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    ||||||||||||||||  || ||||||||||||| |||||||||| ||||||||||||||    
T  9911587 acacagctaataatttaaaagaaatcacataattcagtgtaattacaagtgtcggtgtcg 9911528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 157 - 220
Target Start/End: Complemental strand, 21395370 - 21395308
Alignment:
Q  157 cgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    |||| |||| ||||||||||||  ||||| ||||||||||||||||||| ||||||||||||||    
T  21395370 cgccaacaccgctaataatttgagaaaat-acataatttagtgtaattacaagtgtcggtgtcg 21395308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 160 - 226
Target Start/End: Original strand, 24645479 - 24645546
Alignment:
Q  160 cgacacagctaataatttgcaaaa-atcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    ||||||||||||||||||| |||| ||||||||||| ||| || ||| ||||||||||||| ||||||    
T  24645479 cgacacagctaataatttgaaaaaaatcacataattcagtatagttacaagtgtcggtgtcagacacg 24645546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 157 - 220
Target Start/End: Original strand, 26562685 - 26562748
Alignment:
Q  157 cgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    ||||||||| ||||| ||||||  |||||||||||||| |||||||||||| |||||| |||||    
T  26562685 cgccgacactgctaaaaatttgagaaaatcacataattcagtgtaattatatgtgtcgatgtcg 26562748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 158 - 220
Target Start/End: Complemental strand, 34290139 - 34290079
Alignment:
Q  158 gccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    ||||||||| |||||||||||| | |||||||||||| |||||||||||  ||||||||||||    
T  34290139 gccgacacaactaataatttgcgagaatcacataattcagtgtaattat--gtgtcggtgtcg 34290079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 158 - 220
Target Start/End: Complemental strand, 7996440 - 7996378
Alignment:
Q  158 gccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    |||||||| ||||||||||||  ||||||| |||||| |||||||||||| | ||||||||||    
T  7996440 gccgacactgctaataatttgagaaaatcatataattcagtgtaattatatgcgtcggtgtcg 7996378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 158 - 220
Target Start/End: Original strand, 8022361 - 8022423
Alignment:
Q  158 gccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    |||||||| ||||||||||||  ||||||| |||||| |||||||||||| | ||||||||||    
T  8022361 gccgacactgctaataatttgagaaaatcatataattcagtgtaattatatgcgtcggtgtcg 8022423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 168 - 218
Target Start/End: Original strand, 9522898 - 9522948
Alignment:
Q  168 ctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgt 218  Q
    ||||||||||  ||||||||||||||| |||||||||| ||||||||||||    
T  9522898 ctaataatttaaaaaaatcacataattcagtgtaattacaagtgtcggtgt 9522948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 219
Target Start/End: Original strand, 19044431 - 19044522
Alignment:
Q  122 tgacaccgaacatgacatggacactgacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtc 219  Q
    |||||||||| | ||||||||||||||||      |||||||||  |||||||||||  || ||||||||||| ||||| |||||| |||||||||||    
T  19044431 tgacaccgaatacgacatggacactgaca------cgccgacacgactaataatttgagaatatcacataattcagtgttattatatgtgtcggtgtc 19044522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 168 - 218
Target Start/End: Complemental strand, 26178733 - 26178683
Alignment:
Q  168 ctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgt 218  Q
    |||||||||||  ||||||||||||||||||||||| ||| ||||||||||    
T  26178733 ctaataatttgataaaatcacataatttagtgtaatcatatgtgtcggtgt 26178683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 226
Target Start/End: Complemental strand, 31579276 - 31579221
Alignment:
Q  169 taataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    ||||||||||  |||||||||||||| |||||||||||  ||||||||||||||||||    
T  31579276 taataatttgagaaaatcacataattcagtgtaattat--gtgtcggtgtcggacacg 31579221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 168 - 225
Target Start/End: Complemental strand, 12627629 - 12627572
Alignment:
Q  168 ctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacac 225  Q
    |||||||| || ||||||||||||||| |||||||| ||| |||||| ||||||||||    
T  12627629 ctaataatgtgaaaaaatcacataattcagtgtaataatatgtgtcgatgtcggacac 12627572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 147 - 220
Target Start/End: Complemental strand, 17327728 - 17327655
Alignment:
Q  147 gacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    ||||||||  |||||||||| |||| | ||||  |||||||||||||||||||||| |||| ||||| ||||||    
T  17327728 gacagtgatacgccgacacaactaagattttgagaaaatcacataatttagtgtaactatatgtgtcagtgtcg 17327655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 159 - 232
Target Start/End: Original strand, 2117074 - 2117151
Alignment:
Q  159 ccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcg----gtgtcggacacgcctaat 232  Q
    |||||||  ||||||||||| ||||||||||||||| | || ||||||||||||||    |||||||||| |||||||    
T  2117074 ccgacacctctaataatttgaaaaaatcacataattcaatgcaattataagtgtcgtgtcgtgtcggacatgcctaat 2117151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 226
Target Start/End: Original strand, 7740650 - 7740706
Alignment:
Q  170 aataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    |||||||||  ||||||||| |||| |||||||||||| ||||| ||||||||||||    
T  7740650 aataatttgtgaaaatcacaaaattgagtgtaattatatgtgtcagtgtcggacacg 7740706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 220
Target Start/End: Original strand, 7973673 - 7973713
Alignment:
Q  180 aaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    |||||| |||||||| |||||||||||||||||||||||||    
T  7973673 aaaaattacataattaagtgtaattataagtgtcggtgtcg 7973713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 167 - 218
Target Start/End: Complemental strand, 8805625 - 8805576
Alignment:
Q  167 gctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgt 218  Q
    ||||||||||||  ||||||||||||||||||||||||||  ||||||||||    
T  8805625 gctaataatttgagaaaatcacataatttagtgtaattat--gtgtcggtgt 8805576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 157 - 220
Target Start/End: Complemental strand, 8931665 - 8931602
Alignment:
Q  157 cgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    ||||||||||||||| ||||||  ||||| |||||||| ||| |||||||| |||||| |||||    
T  8931665 cgccgacacagctaaaaatttgagaaaataacataattcagtataattatatgtgtcgatgtcg 8931602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 169 - 220
Target Start/End: Original strand, 9617442 - 9617493
Alignment:
Q  169 taataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    ||||||||||  |||||||||||||| | |||||||||| ||||||||||||    
T  9617442 taataatttgagaaaatcacataattcaatgtaattatatgtgtcggtgtcg 9617493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 161 - 212
Target Start/End: Complemental strand, 10889033 - 10888982
Alignment:
Q  161 gacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgt 212  Q
    ||||| ||||||||||||  |||||||||||||||||||| |||||| ||||    
T  10889033 gacaccgctaataatttgataaaatcacataatttagtgtgattatatgtgt 10888982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 160 - 219
Target Start/End: Complemental strand, 15489792 - 15489733
Alignment:
Q  160 cgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtc 219  Q
    ||||||| ||||||||||| |||||| ||| |||| | |||||||| |||||||||||||    
T  15489792 cgacacaactaataatttgaaaaaattacacaattcaatgtaattacaagtgtcggtgtc 15489733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #70
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 167 - 226
Target Start/End: Original strand, 24614416 - 24614475
Alignment:
Q  167 gctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    |||||||||||  |||||| | |||||||||||||||| || |||| |||||||||||||    
T  24614416 gctaataatttaaaaaaattatataatttagtgtaattgtatgtgttggtgtcggacacg 24614475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #71
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 225
Target Start/End: Original strand, 4864073 - 4864127
Alignment:
Q  171 ataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacac 225  Q
    |||||||| |||||| |||||||||| | |||||||| |||| ||||||||||||    
T  4864073 ataatttgaaaaaatgacataatttaatttaattatatgtgttggtgtcggacac 4864127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #72
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 208
Target Start/End: Complemental strand, 16388283 - 16388245
Alignment:
Q  170 aataatttgcaaaaatcacataatttagtgtaattataa 208  Q
    ||||||||| ||||||||||||||| |||||||||||||    
T  16388283 aataatttgaaaaaatcacataattcagtgtaattataa 16388245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #73
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 194
Target Start/End: Complemental strand, 25010262 - 25010228
Alignment:
Q  160 cgacacagctaataatttgcaaaaatcacataatt 194  Q
    ||||||||||||||||||| |||||||||||||||    
T  25010262 cgacacagctaataatttgaaaaaatcacataatt 25010228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #74
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 226
Target Start/End: Complemental strand, 26402720 - 26402674
Alignment:
Q  180 aaaaatcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    |||||| |||||||| |||||||| | ||||||||||||||||||||    
T  26402720 aaaaatgacataattcagtgtaatcacaagtgtcggtgtcggacacg 26402674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #75
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 226
Target Start/End: Complemental strand, 27904111 - 27904030
Alignment:
Q  147 gacagtgacgcgccgacacagctaataattt--gcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    |||| |||| |||||||| ||||||||||||    ||||| ||||||||| |||||||||| || |||||||||| ||||||    
T  27904111 gacattgacacgccgacatagctaataatttaaaaaaaaaacacataattcagtgtaattacaaatgtcggtgtcagacacg 27904030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #76
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 226
Target Start/End: Original strand, 30851598 - 30851665
Alignment:
Q  157 cgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    ||||||||| |||||||||||   |||||||||  ||| | |||||||||| ||||||||||||||||||    
T  30851598 cgccgacactgctaataatttaagaaaatcaca--attcaatgtaattatatgtgtcggtgtcggacacg 30851665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #77
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 215
Target Start/End: Complemental strand, 30866223 - 30866149
Alignment:
Q  141 gacactgacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcgg 215  Q
    ||||||||||  ||| | || |||| ||||||||||||  |||||||||||||| | |||||||||| |||||||    
T  30866223 gacactgacaccgacacaccaacaccgctaataatttgagaaaatcacataattcaatgtaattatatgtgtcgg 30866149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 220
Target Start/End: Original strand, 8713978 - 8714039
Alignment:
Q  160 cgacacagctaataatttgcaaaa-atcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    |||||||| |||||||||| |||| ||||||||||| |||||||||| || ||| |||||||    
T  8713978 cgacacagttaataatttgaaaaaaatcacataattcagtgtaattacaaatgtgggtgtcg 8714039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 225
Target Start/End: Complemental strand, 13360420 - 13360367
Alignment:
Q  172 taatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacac 225  Q
    |||||||  |||||||||||||| |||||||||||| || |||||||| |||||    
T  13360420 taatttgagaaaatcacataattcagtgtaattatatgtttcggtgtcagacac 13360367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #80
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 226
Target Start/End: Complemental strand, 16388248 - 16388211
Alignment:
Q  189 ataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    |||||| |||||||||| ||||||||||||||||||||    
T  16388248 ataattcagtgtaattacaagtgtcggtgtcggacacg 16388211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #81
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 226
Target Start/End: Original strand, 23771575 - 23771643
Alignment:
Q  157 cgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    ||||||||||| |||||||||  |||||| | ||| || |||||||||| || |||||||||||||||||    
T  23771575 cgccgacacagttaataattta-aaaaattatatacttcagtgtaattacaaatgtcggtgtcggacacg 23771643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #82
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 218
Target Start/End: Original strand, 24138426 - 24138483
Alignment:
Q  161 gacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgt 218  Q
    ||||| |||||||||||| |||||||| |||||| |||||| ||||| || |||||||    
T  24138426 gacactgctaataatttgaaaaaatcatataattaagtgtatttatatgtatcggtgt 24138483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #83
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 219
Target Start/End: Complemental strand, 31429088 - 31429004
Alignment:
Q  135 gacatggacactgacagtgacgcgccgacacagctaataatttgcaaaaa-tcacataatttagtgtaattataagtgtcggtgtc 219  Q
    |||| ||||||||||| |||| |||| || |||||||||||||  ||||| |||||||||| |||||||||| || ||| ||||||    
T  31429088 gacacggacactgacactgacacgcc-acccagctaataatttaaaaaaaatcacataattcagtgtaattacaaatgtaggtgtc 31429004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #84
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 220
Target Start/End: Complemental strand, 34073400 - 34073347
Alignment:
Q  167 gctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    ||||||||||||  |||||| ||||||| |||||||||||| | ||||||||||    
T  34073400 gctaataatttgagaaaatctcataattcagtgtaattatatgggtcggtgtcg 34073347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #85
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 206
Target Start/End: Complemental strand, 34225868 - 34225823
Alignment:
Q  161 gacacagctaataatttgcaaaaatcacataatttagtgtaattat 206  Q
    |||||| ||||||||||| ||||||| ||||||| |||||||||||    
T  34225868 gacacaactaataatttgaaaaaatcgcataattcagtgtaattat 34225823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #86
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 168 - 220
Target Start/End: Complemental strand, 16111809 - 16111757
Alignment:
Q  168 ctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    |||||| |||| | |||| ||||||||||||||||||||| ||||| ||||||    
T  16111809 ctaatagtttgaataaattacataatttagtgtaattataggtgtcagtgtcg 16111757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #87
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 161 - 213
Target Start/End: Original strand, 17302347 - 17302399
Alignment:
Q  161 gacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtc 213  Q
    |||||| ||||||||||   ||||||||||||||| ||||||||||| |||||    
T  17302347 gacacaactaataatttaagaaaatcacataattttgtgtaattatatgtgtc 17302399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #88
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 212
Target Start/End: Original strand, 17435198 - 17435250
Alignment:
Q  160 cgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgt 212  Q
    ||||| ||||||||||||  |||||| |||||||| |||||||||| ||||||    
T  17435198 cgacatagctaataattttaaaaaattacataattcagtgtaattacaagtgt 17435250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #89
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 224
Target Start/End: Complemental strand, 32298643 - 32298603
Alignment:
Q  184 atcacataatttagtgtaattataagtgtcggtgtcggaca 224  Q
    |||||||||||||||||||||||| |||| |||||| ||||    
T  32298643 atcacataatttagtgtaattatatgtgttggtgtcagaca 32298603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #90
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 213
Target Start/End: Complemental strand, 33340448 - 33340392
Alignment:
Q  157 cgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtc 213  Q
    ||||||||| | | |||||||  |||||||||||| |||| ||||||||||||||||    
T  33340448 cgccgacaccgttgataatttaaaaaaatcacatattttactgtaattataagtgtc 33340392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #91
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 158 - 226
Target Start/End: Original strand, 34172190 - 34172258
Alignment:
Q  158 gccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    ||||||||  |||| ||||||  |||||||||||||| | |  ||||||| ||||||||||||||||||    
T  34172190 gccgacacctctaacaatttgagaaaatcacataattaattaaaattatatgtgtcggtgtcggacacg 34172258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #92
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 213
Target Start/End: Original strand, 35125650 - 35125706
Alignment:
Q  157 cgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtc 213  Q
    ||||||||| | | |||||||  |||||||||||| |||| ||||||||||||||||    
T  35125650 cgccgacaccgttgataatttaaaaaaatcacatattttactgtaattataagtgtc 35125706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 63; Significance: 2e-27; HSPs: 97)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 46348463 - 46348377
Alignment:
Q  140 ggacactgacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    |||||| |||| |||| |||||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||    
T  46348463 ggacacggacactgacacgccgacacagctaataatttgaaaaaatcatataatttagtgtaattacaagtgtcggtgtcggacacg 46348377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 147 - 226
Target Start/End: Complemental strand, 22881689 - 22881610
Alignment:
Q  147 gacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    |||| |||| |||||||||| ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||    
T  22881689 gacactgacacgccgacacaactaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcggacacg 22881610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 161 - 226
Target Start/End: Complemental strand, 22515946 - 22515881
Alignment:
Q  161 gacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||    
T  22515946 gacacagctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcggacacg 22515881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 159 - 232
Target Start/End: Complemental strand, 31672956 - 31672883
Alignment:
Q  159 ccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacgcctaat 232  Q
    |||||||||||||||||||| ||||||||| ||||| |||||||||| |||| |||||||||||||||||||||    
T  31672956 ccgacacagctaataatttgaaaaaatcacttaattcagtgtaattacaagtctcggtgtcggacacgcctaat 31672883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 152 - 220
Target Start/End: Complemental strand, 1486777 - 1486709
Alignment:
Q  152 tgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    |||| ||| |||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  1486777 tgacacgctgacacagctaataatttgaaaaaatcacataattcagtgtaattataagtgtcggtgtcg 1486709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 147 - 226
Target Start/End: Original strand, 37598818 - 37598896
Alignment:
Q  147 gacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    |||| |||| |||||||||| ||||||||||| |||||||||| |||| |||||||||||||||||||||||||||||||    
T  37598818 gacactgacacgccgacacaactaataatttgaaaaaatcaca-aattcagtgtaattataagtgtcggtgtcggacacg 37598896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 160 - 226
Target Start/End: Complemental strand, 38078721 - 38078655
Alignment:
Q  160 cgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    ||||||||||||||||||| ||||||||||||||| | |||||||| ||||||||||||||||||||    
T  38078721 cgacacagctaataatttgaaaaaatcacataattcaatgtaattacaagtgtcggtgtcggacacg 38078655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 157 - 226
Target Start/End: Complemental strand, 41877533 - 41877464
Alignment:
Q  157 cgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    ||||||||| ||||||||||||  ||||| ||||||||||||||||||| ||||||||||||||||||||    
T  41877533 cgccgacaccgctaataatttgagaaaattacataatttagtgtaattacaagtgtcggtgtcggacacg 41877464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 152 - 220
Target Start/End: Original strand, 113290 - 113358
Alignment:
Q  152 tgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    |||| |||||||||||||||||||||| ||||||||||||||| |||||||||| |||||| |||||||    
T  113290 tgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtaggtgtcg 113358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 147 - 226
Target Start/End: Original strand, 36878447 - 36878526
Alignment:
Q  147 gacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    |||| |||| ||||||||| ||||||||||||  |||||||||||||| |||||||||||| ||||||||||| ||||||    
T  36878447 gacactgacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattataggtgtcggtgtctgacacg 36878526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 141 - 220
Target Start/End: Original strand, 5944261 - 5944342
Alignment:
Q  141 gacactgacagtgacgcgccgacacagctaataatttgcaaaa--atcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    ||||| |||| |||| ||||| |||||||||||||||| ||||  ||||||||||| |||||||||||||||||||||||||    
T  5944261 gacacagacactgacacgccgccacagctaataatttgaaaaaaaatcacataattcagtgtaattataagtgtcggtgtcg 5944342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 147 - 225
Target Start/End: Original strand, 9103626 - 9103703
Alignment:
Q  147 gacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacac 225  Q
    |||| |||| ||||||||||| |||||||||| ||||||||||||||||||| ||| || |||||||||||||||||||    
T  9103626 gacactgacacgccgacacagttaataatttgaaaaaatcacataatttagtttaa-tacaagtgtcggtgtcggacac 9103703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 152 - 226
Target Start/End: Complemental strand, 19058924 - 19058850
Alignment:
Q  152 tgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    |||| |||||||||||||||||||||  ||| || |||||||| |||||||||| ||||||||||||||||||||    
T  19058924 tgacacgccgacacagctaataatttaaaaagataacataattcagtgtaattacaagtgtcggtgtcggacacg 19058850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 142 - 224
Target Start/End: Complemental strand, 42359527 - 42359445
Alignment:
Q  142 acactgacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggaca 224  Q
    |||| |||| |||| ||| |||||| ||||||||||| |||||||||| |||| |||||||||| ||||||||||||||||||    
T  42359527 acacggacactgacacgctgacacatctaataatttgaaaaaatcacaaaattcagtgtaattacaagtgtcggtgtcggaca 42359445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 141 - 215
Target Start/End: Complemental strand, 48450666 - 48450592
Alignment:
Q  141 gacactgacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcgg 215  Q
    ||||| |||| |||| |||| ||||||||||||||||| |||||| ||||||||||||||||||| |||||||||    
T  48450666 gacacggacactgacacgccaacacagctaataatttgaaaaaataacataatttagtgtaattacaagtgtcgg 48450592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 158 - 226
Target Start/End: Original strand, 51410021 - 51410090
Alignment:
Q  158 gccgacacagctaataatttgcaaaa-atcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    ||||||||| ||||||||||| |||| ||||||||||| |||||||||| ||||||||||||||||||||    
T  51410021 gccgacacatctaataatttgaaaaaaatcacataattcagtgtaattacaagtgtcggtgtcggacacg 51410090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 141 - 213
Target Start/End: Complemental strand, 398844 - 398772
Alignment:
Q  141 gacactgacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtc 213  Q
    ||||| |||| |||| ||||||||| |||||||||||| ||||||||||||||| |||||||||||| |||||    
T  398844 gacacggacactgacacgccgacaccgctaataatttgaaaaaatcacataattcagtgtaattataggtgtc 398772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 157 - 213
Target Start/End: Complemental strand, 14359584 - 14359529
Alignment:
Q  157 cgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtc 213  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||    
T  14359584 cgccgacacagctaataatttg-aaaaatcacataatttagtgtaattacaagtgtc 14359529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 140 - 220
Target Start/End: Complemental strand, 18556536 - 18556456
Alignment:
Q  140 ggacactgacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    |||||| |||| |||| |||||||||||||||||||||| ||| ||||||||||||| |||||||| |||| | |||||||    
T  18556536 ggacacggacactgacacgccgacacagctaataatttgaaaatatcacataatttaatgtaattacaagtattggtgtcg 18556456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 157 - 225
Target Start/End: Complemental strand, 39953209 - 39953141
Alignment:
Q  157 cgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacac 225  Q
    ||||||||| |||||||||||   |||||||||||||||||||||||| || |||||||||||||||||    
T  39953209 cgccgacaccgctaataattttagaaaatcacataatttagtgtaattgtatgtgtcggtgtcggacac 39953141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 159 - 226
Target Start/End: Complemental strand, 1864941 - 1864874
Alignment:
Q  159 ccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    ||||||||| ||||||||||  |||||||||||||| |||||||||||| |||||||||| |||||||    
T  1864941 ccgacacagttaataatttgagaaaatcacataattcagtgtaattatatgtgtcggtgttggacacg 1864874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 141 - 220
Target Start/End: Complemental strand, 6612250 - 6612171
Alignment:
Q  141 gacactgacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    ||||| |||| |||| |||||| |||| |||||||||| |||||| |||||||| |||||||||| ||||||||||||||    
T  6612250 gacacggacaatgacacgccgatacagttaataatttgaaaaaattacataattcagtgtaattacaagtgtcggtgtcg 6612171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 170 - 225
Target Start/End: Original strand, 18337338 - 18337393
Alignment:
Q  170 aataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacac 225  Q
    ||||||||| ||||||||||||||| |||||||||| |||||||||||||||||||    
T  18337338 aataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcggacac 18337393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 161 - 220
Target Start/End: Complemental strand, 24577245 - 24577186
Alignment:
Q  161 gacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    |||||| ||||||||||| ||||||||||||||| |||||||||| ||||||||||||||    
T  24577245 gacacaactaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcg 24577186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 161 - 220
Target Start/End: Original strand, 25272482 - 25272541
Alignment:
Q  161 gacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    ||||||| ||| ||||||  ||||||||||||||||||||||||||||||||||||||||    
T  25272482 gacacagttaacaatttgagaaaatcacataatttagtgtaattataagtgtcggtgtcg 25272541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 152 - 215
Target Start/End: Original strand, 31015034 - 31015097
Alignment:
Q  152 tgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcgg 215  Q
    ||||||||| |||||||||||||||||  |||||||||||||| |||||||||| |||||||||    
T  31015034 tgacgcgcctacacagctaataatttgagaaaatcacataattcagtgtaattacaagtgtcgg 31015097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 147 - 218
Target Start/End: Complemental strand, 32461536 - 32461465
Alignment:
Q  147 gacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgt 218  Q
    ||||||||| ||||| |||| ||||||||||| ||||||||||||||||| |||||||| |||||| |||||    
T  32461536 gacagtgacacgccggcacaactaataatttgaaaaaatcacataatttaatgtaattacaagtgttggtgt 32461465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 159 - 226
Target Start/End: Complemental strand, 40258994 - 40258927
Alignment:
Q  159 ccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    ||||||||  |||||||||| ||||||||||||||| |||||||||| ||||||||||||| ||||||    
T  40258994 ccgacacaattaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcagacacg 40258927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 168 - 226
Target Start/End: Complemental strand, 14332694 - 14332636
Alignment:
Q  168 ctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    |||||||||||  ||||||||||||||||||||||||||| || |||||||||||||||    
T  14332694 ctaataatttgagaaaatcacataatttagtgtaattatatgtctcggtgtcggacacg 14332636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 159 - 220
Target Start/End: Complemental strand, 1705053 - 1704992
Alignment:
Q  159 ccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    |||||||| ||||||||||| ||||||||||||||| || ||||||| ||||||||||||||    
T  1705053 ccgacacatctaataatttgaaaaaatcacataattcagggtaattacaagtgtcggtgtcg 1704992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 157 - 226
Target Start/End: Complemental strand, 5898329 - 5898260
Alignment:
Q  157 cgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    ||||||||| ||||||||| || ||||||||||||||| |||||||||||| | ||||||||| ||||||    
T  5898329 cgccgacaccgctaataatctgaaaaaatcacataattcagtgtaattatatgcgtcggtgtcagacacg 5898260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 157 - 226
Target Start/End: Original strand, 21530685 - 21530754
Alignment:
Q  157 cgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    ||||||||| | ||||||||||  ||||||| ||||||| || |||||||||||||||||||||||||||    
T  21530685 cgccgacaccgttaataatttgagaaaatcatataatttggtataattataagtgtcggtgtcggacacg 21530754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 158 - 226
Target Start/End: Complemental strand, 35702650 - 35702582
Alignment:
Q  158 gccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    ||||||||||||||||||||| |||  ||| |||||| |||||||||| ||||||| ||||||||||||    
T  35702650 gccgacacagctaataatttgaaaacttcaaataattaagtgtaattacaagtgtcagtgtcggacacg 35702582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 161 - 225
Target Start/End: Original strand, 40181871 - 40181935
Alignment:
Q  161 gacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacac 225  Q
    ||||| ||||||||||||  |||||||||||||| |||||||||||| || ||||||||||||||    
T  40181871 gacactgctaataatttgagaaaatcacataattcagtgtaattatatgtatcggtgtcggacac 40181935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 147 - 226
Target Start/End: Original strand, 1815243 - 1815322
Alignment:
Q  147 gacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    |||| |||| ||||||||||  |||| ||||  ||||||||||||||| |||||||||| ||||||||||||| ||||||    
T  1815243 gacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaattacaagtgtcggtgtccgacacg 1815322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 141 - 224
Target Start/End: Complemental strand, 5927419 - 5927336
Alignment:
Q  141 gacactgacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggaca 224  Q
    ||||| |||| |||| |||  |||| |||||||||||| |||||||| |||||||| |||||||| ||||||| ||||||||||    
T  5927419 gacacggacactgacacgctaacactgctaataatttgaaaaaatcatataatttaatgtaattacaagtgtcagtgtcggaca 5927336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 141 - 232
Target Start/End: Original strand, 9709800 - 9709891
Alignment:
Q  141 gacactgacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacgcctaat 232  Q
    ||||| |||| ||||  ||| |||| ||||||||||||  ||||||||||||||   |||||||||| ||||||||||||||||||| ||||    
T  9709800 gacacggacactgacatgcctacaccgctaataatttgagaaaatcacataattcgttgtaattatatgtgtcggtgtcggacacgcttaat 9709891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 159 - 218
Target Start/End: Original strand, 21378576 - 21378635
Alignment:
Q  159 ccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgt 218  Q
    |||||||||||||||| ||| |||||| |||||||| |||||||||| ||||||||||||    
T  21378576 ccgacacagctaataaattgaaaaaattacataattcagtgtaattacaagtgtcggtgt 21378635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 141 - 220
Target Start/End: Original strand, 47989478 - 47989556
Alignment:
Q  141 gacactgacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    ||||| |||| |||| ||||||||||  |||||||||  ||||||||||||||| |||||||||| ||||||||||||||    
T  47989478 gacacagacactgacacgccgacacaa-taataatttaaaaaaatcacataattcagtgtaattacaagtgtcggtgtcg 47989556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 157 - 226
Target Start/End: Original strand, 13436454 - 13436523
Alignment:
Q  157 cgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    ||||||||| |||||||||||    ||||||||||||| |||||||||||| |||| |||||||||||||    
T  13436454 cgccgacactgctaataatttaaggaaatcacataattcagtgtaattatatgtgttggtgtcggacacg 13436523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 164 - 213
Target Start/End: Original strand, 15323166 - 15323215
Alignment:
Q  164 acagctaataatttgcaaaaatcacataatttagtgtaattataagtgtc 213  Q
    |||| |||||||||| ||||||||||||||||||||||||| ||||||||    
T  15323166 acagttaataatttgaaaaaatcacataatttagtgtaattgtaagtgtc 15323215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 152 - 220
Target Start/End: Original strand, 40917742 - 40917808
Alignment:
Q  152 tgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    |||| |||||||||||||||||||||| |||||||||  |||| |||||||||| |||| |||||||||    
T  40917742 tgacacgccgacacagctaataatttgaaaaaatcac--aattaagtgtaattacaagtctcggtgtcg 40917808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 142 - 226
Target Start/End: Complemental strand, 2896199 - 2896115
Alignment:
Q  142 acactgacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    |||| |||| |||| ||||||||| ||||||||||||  |||||||||||||| ||||||  ||||  |||||||||| ||||||    
T  2896199 acacggacactgacacgccgacaccgctaataatttgagaaaatcacataattcagtgtagctatatatgtcggtgtcagacacg 2896115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 160 - 220
Target Start/End: Complemental strand, 9629960 - 9629900
Alignment:
Q  160 cgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    |||||| ||||||||||||  ||||||| |||||| ||||| |||||||||||||||||||    
T  9629960 cgacaccgctaataatttgataaaatcatataattcagtgtgattataagtgtcggtgtcg 9629900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 157 - 225
Target Start/End: Complemental strand, 12443523 - 12443456
Alignment:
Q  157 cgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacac 225  Q
    ||||||||||||||||||||||  |||||||||||||| ||||||||| || ||| | |||||||||||    
T  12443523 cgccgacacagctaataatttgagaaaatcacataattcagtgtaattgtatgtgac-gtgtcggacac 12443456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 13011278 - 13011210
Alignment:
Q  158 gccgacacagctaataatttgcaaaaa-tcacataatttagtgtaattataagtgtcggtgtcggacac 225  Q
    ||||||||||||||||||||| ||||| |||||||||| |||||||||| |||||| ||| | ||||||    
T  13011278 gccgacacagctaataatttgaaaaaaatcacataattaagtgtaattacaagtgttggttttggacac 13011210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 161 - 225
Target Start/End: Complemental strand, 18190167 - 18190103
Alignment:
Q  161 gacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacac 225  Q
    |||||| ||||||||||| |||||| |||||||| |||||||||| |||||||| |||| |||||    
T  18190167 gacacacctaataatttgaaaaaattacataattcagtgtaattacaagtgtcgatgtcagacac 18190103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 181 - 225
Target Start/End: Original strand, 30749860 - 30749904
Alignment:
Q  181 aaaatcacataatttagtgtaattataagtgtcggtgtcggacac 225  Q
    |||||||||||||| |||||||||||| |||||||||||||||||    
T  30749860 aaaatcacataattcagtgtaattatatgtgtcggtgtcggacac 30749904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 181 - 225
Target Start/End: Original strand, 30771311 - 30771355
Alignment:
Q  181 aaaatcacataatttagtgtaattataagtgtcggtgtcggacac 225  Q
    |||||||||||||| |||||||||||| |||||||||||||||||    
T  30771311 aaaatcacataattcagtgtaattatatgtgtcggtgtcggacac 30771355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 157 - 220
Target Start/End: Complemental strand, 5376563 - 5376500
Alignment:
Q  157 cgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    ||||||||| |||||||||||   ||||| |||||||| |||||||||| ||||||||||||||    
T  5376563 cgccgacaccgctaataatttaagaaaataacataattcagtgtaattaaaagtgtcggtgtcg 5376500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 161 - 220
Target Start/End: Original strand, 6332671 - 6332729
Alignment:
Q  161 gacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    |||||| ||||||||||| ||||||||||||||| |||||||||| |||| |||||||||    
T  6332671 gacacaactaataatttg-aaaaatcacataattcagtgtaattacaagtatcggtgtcg 6332729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 157 - 220
Target Start/End: Original strand, 9828040 - 9828103
Alignment:
Q  157 cgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    |||||||||  |||||||||||  |||||||||||||| ||||||||| || ||||||||||||    
T  9828040 cgccgacaccactaataatttgataaaatcacataattcagtgtaattttatgtgtcggtgtcg 9828103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 147 - 218
Target Start/End: Original strand, 13997869 - 13997940
Alignment:
Q  147 gacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgt 218  Q
    |||| |||| ||||||||| | |||| ||||  ||||||||||||||| |||||||||||| ||||||||||    
T  13997869 gacactgacacgccgacaccgttaattatttaaaaaaatcacataattcagtgtaattatatgtgtcggtgt 13997940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 159 - 218
Target Start/End: Original strand, 23738676 - 23738735
Alignment:
Q  159 ccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgt 218  Q
    |||||||||||||||||||| ||||||||||||||| |||| ||||| | |||| |||||    
T  23738676 ccgacacagctaataatttgaaaaaatcacataattcagtgcaattaaatgtgttggtgt 23738735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 141 - 216
Target Start/End: Original strand, 18471278 - 18471355
Alignment:
Q  141 gacactgacagtgacgcgccgacacagctaataatttgcaaaa--atcacataatttagtgtaattataagtgtcggt 216  Q
    ||||| |||| |||| || ||||||||||||||||||| ||||  ||||||||||| ||| |||||| ||||||||||    
T  18471278 gacacggacaatgacccgtcgacacagctaataatttgaaaaaaaatcacataattcagtataattacaagtgtcggt 18471355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 160 - 225
Target Start/End: Complemental strand, 24462737 - 24462671
Alignment:
Q  160 cgacacagctaataatttgc-aaaaatcacataatttagtgtaattataagtgtcggtgtcggacac 225  Q
    |||||||||||||||||||| |||||| | |||||| ||||||||||||  ||||||||| ||||||    
T  24462737 cgacacagctaataatttgcgaaaaattatataattcagtgtaattatatctgtcggtgttggacac 24462671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 28273147 - 28273089
Alignment:
Q  161 gacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtc 219  Q
    |||||| ||||| ||||| |||||||| |||||| |||||||||| |||||||||||||    
T  28273147 gacacaactaatcatttgaaaaaatcatataattcagtgtaattacaagtgtcggtgtc 28273089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 135 - 213
Target Start/End: Complemental strand, 29144443 - 29144365
Alignment:
Q  135 gacatggacactgacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtc 213  Q
    |||| ||||||||||| |||  |||||||||||||||||||||| |||||  | |||||  |||||||||| |||||||    
T  29144443 gacacggacactgacactgatacgccgacacagctaataatttgaaaaaaatagataatgcagtgtaattacaagtgtc 29144365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 147 - 220
Target Start/End: Original strand, 6427336 - 6427409
Alignment:
Q  147 gacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    |||| |||| |||| |||| ||||||||||||  |||||||||||||| | |||||||||| |||| |||||||    
T  6427336 gacactgacacgccaacaccgctaataatttgagaaaatcacataattcaatgtaattatatgtgttggtgtcg 6427409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 161 - 220
Target Start/End: Original strand, 17778549 - 17778605
Alignment:
Q  161 gacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    |||||||||||||||||| ||||||||||||    |||||||||| ||||||||||||||    
T  17778549 gacacagctaataatttgaaaaaatcacata---cagtgtaattacaagtgtcggtgtcg 17778605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 157 - 226
Target Start/End: Complemental strand, 29163444 - 29163375
Alignment:
Q  157 cgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    ||||||||| ||||| |||||   |||||||||||||| | | |||||||| ||||||||||||||||||    
T  29163444 cgccgacaccgctaaaaatttaggaaaatcacataattcaatttaattatatgtgtcggtgtcggacacg 29163375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 161 - 221
Target Start/End: Original strand, 29229461 - 29229522
Alignment:
Q  161 gacacagctaataatttgcaaaaatcacataatttagt-gtaattataagtgtcggtgtcgg 221  Q
    ||||| ||||||||||||  |||||||||| ||||||| ||||||||| |||||||||||||    
T  29229461 gacactgctaataatttgagaaaatcacatgatttagtggtaattatatgtgtcggtgtcgg 29229522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 167 - 220
Target Start/End: Complemental strand, 34712436 - 34712383
Alignment:
Q  167 gctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    ||||||||||||  ||||| ||||||||||||||||||||| ||||| ||||||    
T  34712436 gctaataatttgagaaaataacataatttagtgtaattatatgtgtcagtgtcg 34712383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 135 - 224
Target Start/End: Complemental strand, 38076054 - 38075966
Alignment:
Q  135 gacatggacactgacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggaca 224  Q
    ||||||||||| ||||  ||| || |||||| ||||||||||||   ||||||||||| | |||||||| ||| ||||||||||||||||    
T  38076054 gacatggacac-gacacggacacgacgacactgctaataatttgagtaaatcacataagtcagtgtaatcatatgtgtcggtgtcggaca 38075966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 171 - 220
Target Start/End: Original strand, 44482240 - 44482289
Alignment:
Q  171 ataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    ||||||||  |||||||||||||| |||||||||||| ||||||||||||    
T  44482240 ataatttgagaaaatcacataattcagtgtaattatatgtgtcggtgtcg 44482289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 181 - 226
Target Start/End: Original strand, 52903269 - 52903314
Alignment:
Q  181 aaaatcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    ||||||| |||||| |||||||||||| ||||||||||||||||||    
T  52903269 aaaatcatataattcagtgtaattatatgtgtcggtgtcggacacg 52903314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 168 - 220
Target Start/End: Complemental strand, 7918263 - 7918211
Alignment:
Q  168 ctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    |||||||||||  |||||||||||||| |||||||||||| ||||| ||||||    
T  7918263 ctaataatttgagaaaatcacataattcagtgtaattatatgtgtcagtgtcg 7918211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 220
Target Start/End: Complemental strand, 15449272 - 15449232
Alignment:
Q  180 aaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    |||||||||||||||||||||||||| ||||||| ||||||    
T  15449272 aaaaatcacataatttagtgtaattacaagtgtctgtgtcg 15449232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 213
Target Start/End: Complemental strand, 16164366 - 16164322
Alignment:
Q  169 taataatttgcaaaaatcacataatttagtgtaattataagtgtc 213  Q
    |||||||||| ||||||||||||||||| |||||||||| |||||    
T  16164366 taataatttgaaaaaatcacataatttaatgtaattatatgtgtc 16164322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 160 - 220
Target Start/End: Complemental strand, 20157410 - 20157350
Alignment:
Q  160 cgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    |||||| ||||||||| ||  |||||||||||||| |||||||| ||| ||||||||||||    
T  20157410 cgacaccgctaataatgtgagaaaatcacataattcagtgtaatcatatgtgtcggtgtcg 20157350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 159 - 226
Target Start/End: Complemental strand, 24334767 - 24334699
Alignment:
Q  159 ccgacacagctaataatttgcaaaaatca-cataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    |||||||||||||| ||||| |||||    ||||||| |||||||||| ||||||||||||||||||||    
T  24334767 ccgacacagctaatcatttgaaaaaaaatgcataattcagtgtaattacaagtgtcggtgtcggacacg 24334699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 220
Target Start/End: Complemental strand, 35919316 - 35919276
Alignment:
Q  180 aaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    ||||||||||||||| |||||||||||||||||| ||||||    
T  35919316 aaaaatcacataattcagtgtaattataagtgtccgtgtcg 35919276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 159 - 219
Target Start/End: Original strand, 38503318 - 38503378
Alignment:
Q  159 ccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtc 219  Q
    ||||||| ||||||||||||  ||||||| ||| || |||||||||||| |||||||||||    
T  38503318 ccgacaccgctaataatttgagaaaatcatatatttcagtgtaattatatgtgtcggtgtc 38503378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 225
Target Start/End: Complemental strand, 39130798 - 39130762
Alignment:
Q  189 ataatttagtgtaattataagtgtcggtgtcggacac 225  Q
    ||||||||||||||||||| |||||||||||||||||    
T  39130798 ataatttagtgtaattatatgtgtcggtgtcggacac 39130762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 141 - 216
Target Start/End: Complemental strand, 48040541 - 48040465
Alignment:
Q  141 gacactgacagtgacgcgccgacacagctaataatttgcaaaa-atcacataatttagtgtaattataagtgtcggt 216  Q
    ||||| |||| |||| ||||||||||| |||||||||| ||||  ||||||| |||||||||| || ||||||||||    
T  48040541 gacacggacactgacacgccgacacagataataatttgaaaaaggtcacatattttagtgtaaatacaagtgtcggt 48040465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 159 - 218
Target Start/End: Original strand, 17754309 - 17754368
Alignment:
Q  159 ccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgt 218  Q
    ||||||| |||||||||||| |||||| |||||||| ||||||| |||| ||||| ||||    
T  17754309 ccgacaccgctaataatttgaaaaaattacataattcagtgtaactatatgtgtcagtgt 17754368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 147 - 214
Target Start/End: Complemental strand, 17831604 - 17831537
Alignment:
Q  147 gacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcg 214  Q
    |||| |||| ||||||||| ||||||||||||  |||||||||| ||| |||||||| ||| ||||||    
T  17831604 gacactgacacgccgacaccgctaataatttgagaaaatcacattattcagtgtaatcatatgtgtcg 17831537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 152 - 219
Target Start/End: Complemental strand, 19562689 - 19562622
Alignment:
Q  152 tgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtc 219  Q
    |||| ||||||||| ||||||||||||  |||||| |||| || |||||||||||| |||| ||||||    
T  19562689 tgacacgccgacactgctaataatttgagaaaatctcatagttcagtgtaattatatgtgtaggtgtc 19562622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 157 - 220
Target Start/End: Original strand, 25361882 - 25361945
Alignment:
Q  157 cgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    |||||||||  || ||||||||  |||||||||||||| |||||||||||| ||||| ||||||    
T  25361882 cgccgacaccactgataatttgagaaaatcacataattcagtgtaattatatgtgtcagtgtcg 25361945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 160 - 220
Target Start/End: Complemental strand, 31694772 - 31694710
Alignment:
Q  160 cgacacagctaataatttgcaaaaa--tcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    ||||| ||||||||||||| |||||  |||||||||| ||| |||||| ||||||||||||||    
T  31694772 cgacatagctaataatttgaaaaaaaatcacataattcagtataattacaagtgtcggtgtcg 31694710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 159 - 218
Target Start/End: Complemental strand, 32434777 - 32434718
Alignment:
Q  159 ccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgt 218  Q
    |||||||| ||||||||||| |||| |||||||||| | |||||||| ||||||| ||||    
T  32434777 ccgacacaactaataatttgaaaaagtcacataattcattgtaattacaagtgtctgtgt 32434718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 220
Target Start/End: Original strand, 34371733 - 34371772
Alignment:
Q  181 aaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    |||||||||||||| |||||||||||| ||||||||||||    
T  34371733 aaaatcacataattcagtgtaattatatgtgtcggtgtcg 34371772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 220
Target Start/End: Original strand, 2218264 - 2218298
Alignment:
Q  186 cacataatttagtgtaattataagtgtcggtgtcg 220  Q
    |||||||||||||||||||| ||||||||||||||    
T  2218264 cacataatttagtgtaattacaagtgtcggtgtcg 2218298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 218
Target Start/End: Complemental strand, 10572657 - 10572591
Alignment:
Q  152 tgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgt 218  Q
    |||| |||||||||  |||||||||||  ||||||||||||||  ||||||||| | ||||||||||    
T  10572657 tgacacgccgacaccactaataatttgagaaaatcacataattcggtgtaattaaatgtgtcggtgt 10572591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 207
Target Start/End: Complemental strand, 16927264 - 16927198
Alignment:
Q  141 gacactgacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattata 207  Q
    ||||| |||| |||| || || || ||||||||||||| |||||||| |||||| ||||||||||||    
T  16927264 gacacagacactgacacgtcggcatagctaataatttgaaaaaatcatataattcagtgtaattata 16927198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 226
Target Start/End: Original strand, 21620974 - 21621020
Alignment:
Q  180 aaaaatcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    ||||||||||||||| |||||| ||| ||| ||||||||||||||||    
T  21620974 aaaaatcacataattcagtgtatttacaagcgtcggtgtcggacacg 21621020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 212
Target Start/End: Complemental strand, 25098617 - 25098563
Alignment:
Q  158 gccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgt 212  Q
    |||||||| ||| ||||||||  |||||||||||||| |||||||||||| ||||    
T  25098617 gccgacaccgctgataatttgagaaaatcacataattcagtgtaattatatgtgt 25098563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 194
Target Start/End: Original strand, 1262880 - 1262917
Alignment:
Q  157 cgccgacacagctaataatttgcaaaaatcacataatt 194  Q
    ||||||||||||||||||||||  ||||||||||||||    
T  1262880 cgccgacacagctaataatttgagaaaatcacataatt 1262917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 220
Target Start/End: Original strand, 2283676 - 2283725
Alignment:
Q  171 ataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    |||||||| ||||||||||| ||| | ||||||||||||||| |||||||    
T  2283676 ataatttgaaaaaatcacatgattcaatgtaattataagtgttggtgtcg 2283725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 220
Target Start/End: Complemental strand, 7353546 - 7353493
Alignment:
Q  167 gctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    |||| ||||| | |||||| |||||||||||||||||||||  |||||||||||    
T  7353546 gctattaattcgaaaaaattacataatttagtgtaattatatatgtcggtgtcg 7353493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 225
Target Start/End: Original strand, 2784576 - 2784620
Alignment:
Q  181 aaaatcacataatttagtgtaattataagtgtcggtgtcggacac 225  Q
    |||||||||||||| ||| |||||||| ||||||||||| |||||    
T  2784576 aaaatcacataattgagtataattatatgtgtcggtgtcagacac 2784620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #92
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 166 - 214
Target Start/End: Complemental strand, 8010341 - 8010293
Alignment:
Q  166 agctaataatttgcaaaaatcacataatttagtgtaattataagtgtcg 214  Q
    ||||||||||||| |||||| | |||||| ||| |||||||||||||||    
T  8010341 agctaataatttgaaaaaattatataattcagtataattataagtgtcg 8010293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #93
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 225
Target Start/End: Complemental strand, 22907390 - 22907334
Alignment:
Q  169 taataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacac 225  Q
    ||||||||||  ||||| | ||||||| || ||||||||||||||||||| ||||||    
T  22907390 taataatttgagaaaattatataatttggtataattataagtgtcggtgtgggacac 22907334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #94
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 141 - 225
Target Start/End: Complemental strand, 23636128 - 23636044
Alignment:
Q  141 gacactgacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacac 225  Q
    ||||| |||| |||| |||||| || || || ||||||  ||||| |||||||| ||||||||| || ||||||||||| |||||    
T  23636128 gacacggacattgacacgccgaaaccgccaaaaatttgagaaaattacataattcagtgtaattgtatgtgtcggtgtcagacac 23636044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #95
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 225
Target Start/End: Complemental strand, 25452206 - 25452145
Alignment:
Q  162 acacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacac 225  Q
    |||| ||||||||||||  |||||| ||||||| |||||||||||  ||||||||||| |||||    
T  25452206 acactgctaataatttgagaaaatctcataattcagtgtaattat--gtgtcggtgtcagacac 25452145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #96
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 216
Target Start/End: Complemental strand, 34257970 - 34257914
Alignment:
Q  160 cgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggt 216  Q
    |||||| | |||||||||   |||||||||||||||||||||||||||  |||||||    
T  34257970 cgacaccgttaataatttaataaaatcacataatttagtgtaattatatatgtcggt 34257914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #97
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 159 - 207
Target Start/End: Original strand, 34298434 - 34298482
Alignment:
Q  159 ccgacacagctaataatttgcaaaaatcacataatttagtgtaattata 207  Q
    |||||||  |||||||||||  |||||||||||||| ||||||||||||    
T  34298434 ccgacaccactaataatttgagaaaatcacataattcagtgtaattata 34298482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 60; Significance: 1e-25; HSPs: 66)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 137 - 220
Target Start/End: Complemental strand, 15816212 - 15816129
Alignment:
Q  137 catggacactgacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    |||||| || |||| |||| |||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  15816212 catggatacggacactgacacgccgacacaactaataatttgaaaaaatcacataatttagtgtaattataagtgtcggtgtcg 15816129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 141 - 226
Target Start/End: Original strand, 20873049 - 20873134
Alignment:
Q  141 gacactgacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    ||||| |||| |||| |||||||| || |||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||    
T  20873049 gacacggacactgacacgccgacatagataataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcggacacg 20873134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 159 - 227
Target Start/End: Original strand, 24613519 - 24613586
Alignment:
Q  159 ccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacgc 227  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||| |||||||||||||||||||||    
T  24613519 ccgacacagctaataatttg-aaaaatcacataattaagtgtaattacaagtgtcggtgtcggacacgc 24613586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 36450834 - 36450748
Alignment:
Q  140 ggacactgacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    |||||| |||| |||| |||||||||| ||||||||||| |||||||||| |||| |||||||||| |||||| |||||||||||||    
T  36450834 ggacacggacactgacacgccgacacaactaataatttgaaaaaatcacagaattcagtgtaattacaagtgtaggtgtcggacacg 36450748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 157 - 226
Target Start/End: Original strand, 5813588 - 5813657
Alignment:
Q  157 cgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    |||||||||||||||||||||| |||| ||||||| |||||||||| || ||||||||||||||||||||    
T  5813588 cgccgacacagctaataatttgaaaaagtcacatattttagtgtaaatacaagtgtcggtgtcggacacg 5813657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 159 - 220
Target Start/End: Original strand, 8342970 - 8343031
Alignment:
Q  159 ccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    |||||| ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||    
T  8342970 ccgacatagctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcg 8343031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 141 - 226
Target Start/End: Original strand, 8343296 - 8343381
Alignment:
Q  141 gacactgacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    ||||||||||  ||| | |||||| ||||||||||||| |||||||||||||||||||||||||| ||||||| |||||| |||||    
T  8343296 gacactgacaccgacacaccgacatagctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcagtgtcgtacacg 8343381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 160 - 220
Target Start/End: Complemental strand, 2572116 - 2572056
Alignment:
Q  160 cgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    ||||||| ||||||||||| |||||||||||||||||||||||||| ||||||||||||||    
T  2572116 cgacacacctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcg 2572056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 157 - 225
Target Start/End: Complemental strand, 13844659 - 13844591
Alignment:
Q  157 cgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacac 225  Q
    ||||||||| ||||||||||||  |||||||||||||| |||||||||||| |||||||||||||||||    
T  13844659 cgccgacactgctaataatttgagaaaatcacataattgagtgtaattatatgtgtcggtgtcggacac 13844591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 141 - 220
Target Start/End: Original strand, 22651956 - 22652035
Alignment:
Q  141 gacactgacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    ||||| |||| |||| |||||||||||||||||||||| ||||||||||||||| | | |||||| ||||||||||||||    
T  22651956 gacacggacactgacacgccgacacagctaataatttgaaaaaatcacataattcaatataattacaagtgtcggtgtcg 22652035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 161 - 220
Target Start/End: Original strand, 25566841 - 25566900
Alignment:
Q  161 gacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    |||||||||||||||||| ||||||||||||||| |||||||||| ||||||||||||||    
T  25566841 gacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcg 25566900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 157 - 219
Target Start/End: Complemental strand, 4298949 - 4298887
Alignment:
Q  157 cgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtc 219  Q
    ||||||||||| |||||||||| ||||||||||||||||| |||||||| |||||||||||||    
T  4298949 cgccgacacagttaataatttgaaaaaatcacataatttaatgtaattacaagtgtcggtgtc 4298887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 168 - 226
Target Start/End: Original strand, 4948659 - 4948717
Alignment:
Q  168 ctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    ||||||||||| ||||||||||||||| |||||||||| ||||||||||||||||||||    
T  4948659 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcggacacg 4948717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 123 - 220
Target Start/End: Complemental strand, 13437055 - 13436964
Alignment:
Q  123 gacaccgaacatgacatggacactgacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    ||||||| ||||||||||||||||||||      |||||||||||||||||||||| ||||||||||||||| |  ||||| | ||||||||||||||    
T  13437055 gacaccggacatgacatggacactgaca------cgccgacacagctaataatttgaaaaaatcacataattcatggtaataacaagtgtcggtgtcg 13436964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 147 - 224
Target Start/End: Original strand, 27101501 - 27101577
Alignment:
Q  147 gacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggaca 224  Q
    |||| |||| ||||||||| |||||||||||| |||||||||||||||||||| ||||||| ||||| ||||||||||    
T  27101501 gacattgacacgccgacaccgctaataatttgaaaaaatcacataatttagtg-aattataggtgtcagtgtcggaca 27101577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 141 - 218
Target Start/End: Complemental strand, 29510383 - 29510306
Alignment:
Q  141 gacactgacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgt 218  Q
    ||||| |||| |||| |||||||||||||||||||||| |||||||||| |||| ||| |||||| ||||||||||||    
T  29510383 gacacggacactgacacgccgacacagctaataatttgaaaaaatcacaaaattcagtataattacaagtgtcggtgt 29510306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 123 - 226
Target Start/End: Original strand, 31556965 - 31557061
Alignment:
Q  123 gacaccgaacatgacatggacactgacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcgga 222  Q
    ||||||| ||||||||||| ||||||||      ||||||||||| |||||||||| ||||||||||||||| |||||||||| |||| |||||||| ||    
T  31556965 gacaccggacatgacatggtcactgaca------cgccgacacagttaataatttg-aaaaatcacataattcagtgtaattacaagtttcggtgtcaga 31557057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 152 - 223
Target Start/End: Original strand, 22595985 - 22596056
Alignment:
Q  152 tgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggac 223  Q
    |||| |||||||||||||||||||||  |||||| |||||||| |||||||||| |||||| ||||||||||    
T  22595985 tgacacgccgacacagctaataatttaaaaaaataacataattcagtgtaattacaagtgttggtgtcggac 22596056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 157 - 219
Target Start/End: Complemental strand, 22197805 - 22197743
Alignment:
Q  157 cgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtc 219  Q
    |||| ||||||||||||||||| |||| ||||||||||||||||||||| ||||||| |||||    
T  22197805 cgccaacacagctaataatttgaaaaattcacataatttagtgtaattacaagtgtcagtgtc 22197743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 25192420 - 25192350
Alignment:
Q  147 gacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtg 217  Q
    |||| |||| |||||||||||||||||||||| |||| | |||||||| ||| ||||||||||||||||||    
T  25192420 gacactgacacgccgacacagctaataatttgaaaaagtgacataattcagtataattataagtgtcggtg 25192350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 157 - 226
Target Start/End: Complemental strand, 31236640 - 31236571
Alignment:
Q  157 cgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    ||||||||| ||||||||||||  |||||||||||||| | |||||||||| ||||||||| ||||||||    
T  31236640 cgccgacactgctaataatttgagaaaatcacataattcaatgtaattatatgtgtcggtgacggacacg 31236571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 169 - 226
Target Start/End: Complemental strand, 33405435 - 33405378
Alignment:
Q  169 taataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    ||||||||||  |||| |||||||||||||||||||||| ||||||||||||||||||    
T  33405435 taataatttgagaaaaacacataatttagtgtaattatatgtgtcggtgtcggacacg 33405378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 160 - 225
Target Start/End: Original strand, 34897084 - 34897149
Alignment:
Q  160 cgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacac 225  Q
    |||||| ||||||||||||  |||||||||||||| |||||||||||| |||||| ||||||||||    
T  34897084 cgacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtgtcgatgtcggacac 34897149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 158 - 226
Target Start/End: Original strand, 18407716 - 18407784
Alignment:
Q  158 gccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    |||||||||||||||||||   ||||||||||||||| |||||||||| |||||||| || ||||||||    
T  18407716 gccgacacagctaataattcaaaaaaatcacataattcagtgtaattacaagtgtcgctgccggacacg 18407784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 157 - 217
Target Start/End: Complemental strand, 39954342 - 39954282
Alignment:
Q  157 cgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtg 217  Q
    ||||||||| ||||||||||||  ||||||||||||||||||||||||||| ||| |||||    
T  39954342 cgccgacaccgctaataatttgagaaaatcacataatttagtgtaattatatgtgacggtg 39954282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 167 - 226
Target Start/End: Original strand, 3025557 - 3025616
Alignment:
Q  167 gctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    ||||||||||||  |||||||||||||| |||||||||||| ||||| ||||||||||||    
T  3025557 gctaataatttgagaaaatcacataattcagtgtaattataggtgtcagtgtcggacacg 3025616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 157 - 220
Target Start/End: Complemental strand, 11927149 - 11927086
Alignment:
Q  157 cgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    ||||||||| | ||||||||||  |||||||||||||| |||||||||||| ||||||||||||    
T  11927149 cgccgacactgttaataatttgataaaatcacataattcagtgtaattatatgtgtcggtgtcg 11927086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 165 - 228
Target Start/End: Complemental strand, 30077442 - 30077379
Alignment:
Q  165 cagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacgcc 228  Q
    |||||||||||||| ||| ||||||||||| |||||||||| ||||||| |||||||| |||||    
T  30077442 cagctaataatttgaaaacatcacataattcagtgtaattacaagtgtccgtgtcggatacgcc 30077379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 147 - 220
Target Start/End: Complemental strand, 30271364 - 30271291
Alignment:
Q  147 gacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    |||| |||| |||||||||||||||| ||||| ||||||||||||||  |||||||||| ||||| | ||||||    
T  30271364 gacactgacacgccgacacagctaatcatttgaaaaaatcacataatgcagtgtaattacaagtgccagtgtcg 30271291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 161 - 226
Target Start/End: Original strand, 40332191 - 40332256
Alignment:
Q  161 gacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    ||||| || |||||||||  |||||||||||||| |||||||||| |||||||||||| |||||||    
T  40332191 gacactgcaaataatttgagaaaatcacataattcagtgtaattacaagtgtcggtgtgggacacg 40332256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 158 - 214
Target Start/End: Complemental strand, 41832002 - 41831946
Alignment:
Q  158 gccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcg 214  Q
    |||||||||| |||||||||| ||||||||||||||| ||||||| || ||||||||    
T  41832002 gccgacacagttaataatttgaaaaaatcacataattcagtgtaactacaagtgtcg 41831946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 147 - 222
Target Start/End: Complemental strand, 4786411 - 4786336
Alignment:
Q  147 gacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcgga 222  Q
    |||| |||| |||||||||   |||||||||   |||||||||||||| |||||||||||| ||||||||||||||    
T  4786411 gacactgacacgccgacaccattaataatttaagaaaatcacataattcagtgtaattatatgtgtcggtgtcgga 4786336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 157 - 220
Target Start/End: Original strand, 11944661 - 11944724
Alignment:
Q  157 cgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    ||||||||| | ||||||||||  |||||||||||| | |||||||||||| ||||||||||||    
T  11944661 cgccgacactgttaataatttgataaaatcacataactcagtgtaattatatgtgtcggtgtcg 11944724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 161 - 212
Target Start/End: Original strand, 14731712 - 14731763
Alignment:
Q  161 gacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgt 212  Q
    ||||| ||||||||||||  ||||||||||||||||||||||||||| ||||    
T  14731712 gacactgctaataatttgagaaaatcacataatttagtgtaattatatgtgt 14731763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 141 - 224
Target Start/End: Complemental strand, 18170561 - 18170478
Alignment:
Q  141 gacactgacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggaca 224  Q
    ||||| |||| |||| ||||||||||  ||| |||||| |||||| |||||||| | |||||||| || |||||||||||||||    
T  18170561 gacacggacactgacacgccgacacaattaaaaatttgaaaaaattacataattcaatgtaattacaaatgtcggtgtcggaca 18170478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 141 - 224
Target Start/End: Complemental strand, 18634129 - 18634046
Alignment:
Q  141 gacactgacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggaca 224  Q
    ||||| |||| |||| ||||||||||  ||| |||||| |||||| |||||||| | |||||||| || |||||||||||||||    
T  18634129 gacacggacactgacacgccgacacaattaaaaatttgaaaaaattacataattcaatgtaattacaaatgtcggtgtcggaca 18634046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 168 - 219
Target Start/End: Complemental strand, 20679447 - 20679396
Alignment:
Q  168 ctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtc 219  Q
    |||||||||||  ||||||||||| || ||||||||||||||||||||||||    
T  20679447 ctaataatttgagaaaatcacatagttcagtgtaattataagtgtcggtgtc 20679396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 141 - 223
Target Start/End: Complemental strand, 926867 - 926785
Alignment:
Q  141 gacactgacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggac 223  Q
    ||||| |||| |||| |||| ||||  |||||||||||  |||||| |||  || ||||||||||||||||||||||||||||    
T  926867 gacacggacactgacacgccaacactcctaataatttgagaaaatctcattgttcagtgtaattataagtgtcggtgtcggac 926785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 141 - 219
Target Start/End: Complemental strand, 4673504 - 4673426
Alignment:
Q  141 gacactgacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtc 219  Q
    ||||| |||| |||| ||||||||||| |||||||||| |||||||| | |||| |||||||||| |||| || |||||    
T  4673504 gacacagacactgacacgccgacacagataataatttgaaaaaatcataaaattcagtgtaattacaagtatcagtgtc 4673426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 187 - 220
Target Start/End: Complemental strand, 16867238 - 16867205
Alignment:
Q  187 acataatttagtgtaattataagtgtcggtgtcg 220  Q
    ||||||||||||||||||||||||||||||||||    
T  16867238 acataatttagtgtaattataagtgtcggtgtcg 16867205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 160 - 224
Target Start/End: Complemental strand, 12606889 - 12606825
Alignment:
Q  160 cgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggaca 224  Q
    |||||| ||||||||||||  ||||||| |||||| | |||||||||| ||||||||||| ||||    
T  12606889 cgacactgctaataatttgagaaaatcatataattcaatgtaattatatgtgtcggtgtcagaca 12606825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 213
Target Start/End: Complemental strand, 24362265 - 24362209
Alignment:
Q  157 cgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtc 213  Q
    ||||||||| ||||||||||||  | |||||||||||| |||||||||||| |||||    
T  24362265 cgccgacaccgctaataatttgagagaatcacataattcagtgtaattatatgtgtc 24362209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 214
Target Start/End: Original strand, 44067497 - 44067569
Alignment:
Q  142 acactgacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcg 214  Q
    |||| |||| |||| ||||||||| | ||||||||||  ||||| |||||||  |||||||||||||||||||    
T  44067497 acaccgacactgacacgccgacacggataataatttgagaaaatgacataatacagtgtaattataagtgtcg 44067569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 168 - 219
Target Start/End: Original strand, 14134706 - 14134757
Alignment:
Q  168 ctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtc 219  Q
    |||||||||||  |||||||||||||| ||||||||||||  ||||||||||    
T  14134706 ctaataatttgagaaaatcacataattcagtgtaattatatatgtcggtgtc 14134757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 161 - 220
Target Start/End: Original strand, 21465412 - 21465471
Alignment:
Q  161 gacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    |||||||||||||||||| |||||||| ||||||   |||||||| |||||| |||||||    
T  21465412 gacacagctaataatttgaaaaaatcatataattcgatgtaattacaagtgttggtgtcg 21465471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 141 - 220
Target Start/End: Original strand, 24669413 - 24669492
Alignment:
Q  141 gacactgacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    ||||| |||| |||| ||| ||||| | ||||||||||   |||| |||||||| |||||||||| ||||||||||||||    
T  24669413 gacacagacactgacacgctgacaccgttaataatttgaggaaattacataattcagtgtaattacaagtgtcggtgtcg 24669492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 161 - 220
Target Start/End: Complemental strand, 25172757 - 25172698
Alignment:
Q  161 gacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    ||||| ||||||||||||  ||||| ||||| |||| |||||||||| ||||||||||||    
T  25172757 gacactgctaataatttgataaaattacatattttaatgtaattatatgtgtcggtgtcg 25172698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 220
Target Start/End: Complemental strand, 26902214 - 26902175
Alignment:
Q  181 aaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    |||||||||||||| |||||||||||| ||||||||||||    
T  26902214 aaaatcacataattcagtgtaattatatgtgtcggtgtcg 26902175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 160 - 219
Target Start/End: Complemental strand, 29447170 - 29447111
Alignment:
Q  160 cgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtc 219  Q
    ||||||| |||||||||||  |||||||||||||| | ||||| || |||||||||||||    
T  29447170 cgacacaactaataatttgagaaaatcacataattcaatgtaactacaagtgtcggtgtc 29447111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 217
Target Start/End: Original strand, 4611532 - 4611590
Alignment:
Q  159 ccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtg 217  Q
    ||||||| ||||||||||||  ||||| |||||||| |||||||||||| || ||||||    
T  4611532 ccgacaccgctaataatttgagaaaataacataattcagtgtaattatatgtctcggtg 4611590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 220
Target Start/End: Original strand, 8847277 - 8847315
Alignment:
Q  182 aaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    ||||||||||||| |||||||||||| ||||||||||||    
T  8847277 aaatcacataattcagtgtaattatatgtgtcggtgtcg 8847315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 226
Target Start/End: Complemental strand, 25887033 - 25886988
Alignment:
Q  180 aaaaatcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    |||||| |||||||||| |||||||||||||||| ||||||||||||    
T  25887033 aaaaattacataatttaatgtaattataagtgtc-gtgtcggacacg 25886988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 215
Target Start/End: Original strand, 27213543 - 27213601
Alignment:
Q  157 cgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcgg 215  Q
    ||||||||| |||||||||||   |||||||||||||| | |||||||||| |||||||    
T  27213543 cgccgacactgctaataatttcagaaaatcacataattcactgtaattatatgtgtcgg 27213601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 223
Target Start/End: Complemental strand, 31580166 - 31580124
Alignment:
Q  181 aaaatcacataatttagtgtaattataagtgtcggtgtcggac 223  Q
    |||||||||||||| |||||||||||| |||||| ||||||||    
T  31580166 aaaatcacataattgagtgtaattataggtgtcgatgtcggac 31580124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 220
Target Start/End: Complemental strand, 35519865 - 35519807
Alignment:
Q  162 acacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    ||||||||||||||||| |||||||||||||||| || ||| | || ||||| ||||||    
T  35519865 acacagctaataatttgaaaaaatcacataattttgtataaatgtatgtgtcagtgtcg 35519807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 218
Target Start/End: Original strand, 7658459 - 7658520
Alignment:
Q  157 cgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgt 218  Q
    |||||||||  |||||||||||  ||||| |||||||| ||||||||||||  |||||||||    
T  7658459 cgccgacaccactaataatttgagaaaattacataattcagtgtaattatatttgtcggtgt 7658520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 216
Target Start/End: Original strand, 34222953 - 34223002
Alignment:
Q  167 gctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggt 216  Q
    |||||||||||   |||||||||||||| |||||||||||| ||||||||    
T  34222953 gctaataatttaataaaatcacataattaagtgtaattatatgtgtcggt 34223002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 212
Target Start/End: Complemental strand, 41838196 - 41838131
Alignment:
Q  147 gacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgt 212  Q
    |||| |||| || ||||||||||||||||||  ||||||||||||||| |||| || || ||||||    
T  41838196 gacactgacacgtcgacacagctaataatttaaaaaaatcacataattcagtgcaactacaagtgt 41838131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 226
Target Start/End: Complemental strand, 43737850 - 43737805
Alignment:
Q  181 aaaatcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    ||||||||| |||  |||||||||||| ||||||||||||||||||    
T  43737850 aaaatcacaaaatacagtgtaattatatgtgtcggtgtcggacacg 43737805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 168 - 220
Target Start/End: Complemental strand, 7472567 - 7472515
Alignment:
Q  168 ctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    ||||||||||  | ||||||||||| |||||||||||||| ||||| ||||||    
T  7472567 ctaataatttaaagaaatcacataaattagtgtaattatatgtgtctgtgtcg 7472515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 225
Target Start/End: Original strand, 12985400 - 12985456
Alignment:
Q  169 taataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacac 225  Q
    ||||||||||  |||||||||||||| | |||||| |||  ||||||||||||||||    
T  12985400 taataatttgagaaaatcacataattcaatgtaatcatatatgtcggtgtcggacac 12985456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 220
Target Start/End: Complemental strand, 17468568 - 17468508
Alignment:
Q  160 cgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    ||||||| | ||||||||| ||||||||||||||   ||||||||| |||||| |||||||    
T  17468568 cgacacaacaaataatttgtaaaaatcacataatgcggtgtaattacaagtgttggtgtcg 17468508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 159 - 219
Target Start/End: Complemental strand, 28385055 - 28384995
Alignment:
Q  159 ccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtc 219  Q
    ||||||| | ||||||| || | ||||| ||||||| |||||||||||| |||||||||||    
T  28385055 ccgacaccgttaataatatgaataaatctcataattcagtgtaattatatgtgtcggtgtc 28384995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 212
Target Start/End: Original strand, 36934669 - 36934721
Alignment:
Q  160 cgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgt 212  Q
    |||||| |||||||||| | ||||||||||||||| | |||||||||| ||||    
T  36934669 cgacaccgctaataattcgaaaaaatcacataattcattgtaattatatgtgt 36934721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 226
Target Start/End: Complemental strand, 37283863 - 37283806
Alignment:
Q  167 gctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    ||||||||| ||  |||||||||||||| |||||||||||  |||||||||| |||||||    
T  37283863 gctaataatctgagaaaatcacataattcagtgtaattat--gtgtcggtgtgggacacg 37283806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 161 - 221
Target Start/End: Original strand, 44694791 - 44694851
Alignment:
Q  161 gacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcgg 221  Q
    |||||||| ||||||||  ||||||||||||||| || ||||||| |||||| || |||||    
T  44694791 gacacagcaaataattttaaaaaatcacataattaagcgtaattacaagtgttggcgtcgg 44694851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 141 - 226
Target Start/End: Original strand, 8778 - 8863
Alignment:
Q  141 gacactgacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    ||||| |||| |||| |||||||||||||||||||||| |||||||| || |||||||||||||| ||||||||||||||||||||    
T  8778 gacacggacactgacacgccgacacagctaataatttgaaaaaatcatattatttagtgtaattacaagtgtcggtgtcggacacg 8863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 58; Significance: 2e-24; HSPs: 67)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 141 - 226
Target Start/End: Complemental strand, 2362054 - 2361969
Alignment:
Q  141 gacactgacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    |||| ||||| |||| | |||||||||||||||||||| |||||| ||||||||||||||||||| ||||||||||||||||||||    
T  2362054 gacattgacattgacacaccgacacagctaataatttgaaaaaattacataatttagtgtaattaaaagtgtcggtgtcggacacg 2361969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 141 - 226
Target Start/End: Complemental strand, 23293065 - 23292980
Alignment:
Q  141 gacactgacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    ||||| |||| |||| |||||||||||||||||||||| ||||||||||||||| ||| |||||| ||||||||||||||||||||    
T  23293065 gacacggacaatgacacgccgacacagctaataatttgaaaaaatcacataattcagtataattacaagtgtcggtgtcggacacg 23292980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 142 - 226
Target Start/End: Complemental strand, 35158063 - 35157979
Alignment:
Q  142 acactgacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    |||| |||| |||| ||||||| || ||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||    
T  35158063 acacggacactgacacgccgacgcaactaataatttggaaaaatcacataatttagtgtaattataagtgtcggtgtctgacacg 35157979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 147 - 226
Target Start/End: Original strand, 49431011 - 49431091
Alignment:
Q  147 gacagtgacgcgccgacacagctaataatttgcaaaa-atcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    ||||||||| |||||||||||||||||||||| |||| ||||||||||| |||||||||| ||||||||||||||||||||    
T  49431011 gacagtgacacgccgacacagctaataatttgaaaaaaatcacataattcagtgtaattaaaagtgtcggtgtcggacacg 49431091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 110 - 224
Target Start/End: Original strand, 21945458 - 21945566
Alignment:
Q  110 tctatgaagcactgacaccgaacatgacatggacactgacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataag 209  Q
    |||||||||||| ||||||| ||||||||  ||||||||||       ||||||||||||||||||||| |||||| |||||||| |||||||||| |||    
T  21945458 tctatgaagcacggacaccggacatgacacagacactgacat------gccgacacagctaataatttgaaaaaatgacataattcagtgtaattacaag 21945551  T
Q  210 tgtcggtgtcggaca 224  Q
    |||||||||||||||    
T  21945552 tgtcggtgtcggaca 21945566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 152 - 226
Target Start/End: Complemental strand, 12895342 - 12895268
Alignment:
Q  152 tgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    |||| ||||||||||  |||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  12895342 tgacacgccgacacaaataataatttgaaaaaatcacataattttgtgtaattataagtgtcggtgtcggacacg 12895268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 161 - 226
Target Start/End: Complemental strand, 54580082 - 54580017
Alignment:
Q  161 gacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    |||||| ||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||    
T  54580082 gacacaactaataatttgaaaaaatcacataattcagtgtaattataagtgtcggtgtcggacacg 54580017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 159 - 226
Target Start/End: Complemental strand, 8423779 - 8423712
Alignment:
Q  159 ccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    ||||||| ||||||||||||  |||||||||||||| ||||||||||||| |||||||||||||||||    
T  8423779 ccgacaccgctaataatttgagaaaatcacataattcagtgtaattataaatgtcggtgtcggacacg 8423712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 161 - 226
Target Start/End: Original strand, 4157150 - 4157214
Alignment:
Q  161 gacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    |||||| ||||||||||| |||||||||||||||||||| ||||| ||||||||||||||||||||    
T  4157150 gacacaactaataatttg-aaaaatcacataatttagtgcaattacaagtgtcggtgtcggacacg 4157214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 141 - 226
Target Start/End: Complemental strand, 12797416 - 12797332
Alignment:
Q  141 gacactgacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    ||||| |||| |||| ||||| || | ||||||||||| ||||||||||||||| |||||||||| ||||||||||||||||||||    
T  12797416 gacacggacactgacacgccggcaaaactaataatttg-aaaaatcacataattcagtgtaattacaagtgtcggtgtcggacacg 12797332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 161 - 226
Target Start/End: Complemental strand, 28964307 - 28964242
Alignment:
Q  161 gacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    |||| ||||||||||||| ||||||||||||||| |||||||||| ||||||| ||||||||||||    
T  28964307 gacatagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtctgtgtcggacacg 28964242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 140 - 220
Target Start/End: Original strand, 30298925 - 30299006
Alignment:
Q  140 ggacactgacagtgacgcgccgacacagctaataatttg-caaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    |||||| |||| |||| ||||||||||||||||||||||  |||||| |||||||| |||||||||| ||||||||||||||    
T  30298925 ggacacggacactgacacgccgacacagctaataatttgaaaaaaatgacataattcagtgtaattacaagtgtcggtgtcg 30299006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 140 - 220
Target Start/End: Original strand, 30327793 - 30327874
Alignment:
Q  140 ggacactgacagtgacgcgccgacacagctaataatttg-caaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    |||||| |||| |||| ||||||||||||||||||||||  |||||| |||||||| |||||||||| ||||||||||||||    
T  30327793 ggacacggacactgacacgccgacacagctaataatttgaaaaaaatgacataattcagtgtaattacaagtgtcggtgtcg 30327874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 157 - 226
Target Start/End: Complemental strand, 34306866 - 34306798
Alignment:
Q  157 cgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    |||||||||| ||||||||||| |||||||| ||||| ||||||||||| ||||||||||||||||||||    
T  34306866 cgccgacacaactaataatttg-aaaaatcagataatgtagtgtaattacaagtgtcggtgtcggacacg 34306798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 162 - 226
Target Start/End: Original strand, 29205445 - 29205509
Alignment:
Q  162 acacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    |||| |||||||||||| ||||||||||||||| |||||||||| |||||||||||| |||||||    
T  29205445 acacggctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgttggacacg 29205509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 158 - 220
Target Start/End: Complemental strand, 3947828 - 3947766
Alignment:
Q  158 gccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    ||||||||||||||||||||| ||||||| ||||||| |||||||||| ||||||| ||||||    
T  3947828 gccgacacagctaataatttgaaaaaatcgcataattcagtgtaattacaagtgtcagtgtcg 3947766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 157 - 226
Target Start/End: Original strand, 42640522 - 42640594
Alignment:
Q  157 cgccgacacagctaataatttgcaaaa---atcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    ||||||||||||| |||||||| ||||   ||||||||||| |||||||||| ||||||||||||||||||||    
T  42640522 cgccgacacagctgataatttgaaaaaaaaatcacataattcagtgtaattacaagtgtcggtgtcggacacg 42640594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 169 - 218
Target Start/End: Complemental strand, 6485662 - 6485613
Alignment:
Q  169 taataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgt 218  Q
    |||||||||| |||||||||||||||||||||||||| ||||||||||||    
T  6485662 taataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgt 6485613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 175 - 227
Target Start/End: Complemental strand, 6879510 - 6879458
Alignment:
Q  175 tttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacgc 227  Q
    |||| ||||||||||||||| |||||||||| |||||||||||||||||||||    
T  6879510 tttggaaaaatcacataattaagtgtaattacaagtgtcggtgtcggacacgc 6879458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 157 - 220
Target Start/End: Complemental strand, 11596415 - 11596352
Alignment:
Q  157 cgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    |||| ||| ||||||||||||| ||||||||||||||| |||||||||| |||||| |||||||    
T  11596415 cgccaacaaagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtaggtgtcg 11596352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 157 - 220
Target Start/End: Complemental strand, 12895179 - 12895116
Alignment:
Q  157 cgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    |||||| ||||||||||||||| ||||||||||||||| |  ||||||| ||||||||||||||    
T  12895179 cgccgaaacagctaataatttgaaaaaatcacataattcaaagtaattacaagtgtcggtgtcg 12895116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 141 - 220
Target Start/End: Original strand, 19482648 - 19482727
Alignment:
Q  141 gacactgacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    ||||| |||| |||| |||||||||| ||||||||||| ||| |||||||||||  ||||||||| |||||| |||||||    
T  19482648 gacacagacactgacacgccgacacaactaataatttgaaaatatcacataattcggtgtaattacaagtgttggtgtcg 19482727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 159 - 222
Target Start/End: Complemental strand, 38847073 - 38847010
Alignment:
Q  159 ccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcgga 222  Q
    |||||||||||||||||||| |||||||| || ||| |||||||||| ||||||| ||||||||    
T  38847073 ccgacacagctaataatttgaaaaaatcatattattcagtgtaattacaagtgtcagtgtcgga 38847010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 141 - 212
Target Start/End: Original strand, 40481617 - 40481687
Alignment:
Q  141 gacactgacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgt 212  Q
    |||||||||| |||| |||||| ||| ||||||||||| ||||||||||||||| |||||||||| ||||||    
T  40481617 gacactgacactgacacgccgatacaactaataatttg-aaaaatcacataattcagtgtaattacaagtgt 40481687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 180 - 226
Target Start/End: Original strand, 4157455 - 4157501
Alignment:
Q  180 aaaaatcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||||    
T  4157455 aaaaatcacataatttagtgcaattacaagtgtcggtgtcggacacg 4157501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 147 - 221
Target Start/End: Original strand, 15029751 - 15029825
Alignment:
Q  147 gacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcgg 221  Q
    |||| |||| ||| ||||| |||||||||||| ||| ||||||||||| |||||||||||| |||| ||||||||    
T  15029751 gacactgacacgcagacactgctaataatttgaaaatatcacataattcagtgtaattatatgtgttggtgtcgg 15029825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 152 - 226
Target Start/End: Original strand, 16073386 - 16073459
Alignment:
Q  152 tgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    |||| |||| |||||  |||||||||| ||||||| ||||||| |||||||||| ||||||||||||||||||||    
T  16073386 tgacacgccaacacaagtaataatttg-aaaaatcgcataattcagtgtaattacaagtgtcggtgtcggacacg 16073459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 157 - 222
Target Start/End: Complemental strand, 4672148 - 4672083
Alignment:
Q  157 cgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcgga 222  Q
    ||||||||||||||||||||||  ||||| |||||||| ||||||  |||| ||||||||||||||    
T  4672148 cgccgacacagctaataatttgggaaaattacataattcagtgtagctatatgtgtcggtgtcgga 4672083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 142 - 223
Target Start/End: Complemental strand, 10499347 - 10499267
Alignment:
Q  142 acactgacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggac 223  Q
    ||||||||| |||| | |||||||| |||| || |||  ||||||||||||||||||||||||||| ||||| |||||||||    
T  10499347 acactgacactgacacaccgacacatctaa-aacttgagaaaatcacataatttagtgtaattatatgtgtcagtgtcggac 10499267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 147 - 220
Target Start/End: Complemental strand, 16303339 - 16303266
Alignment:
Q  147 gacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    |||| |||| |||||||| || ||||| |||| |||||| | ||||||||||||||||| ||||||||||||||    
T  16303339 gacactgacacgccgacaaagataatattttgaaaaaatgatataatttagtgtaattacaagtgtcggtgtcg 16303266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 169 - 226
Target Start/End: Complemental strand, 40179687 - 40179630
Alignment:
Q  169 taataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    ||||| |||| ||||||||||||||| |||||||||||| | ||||||||||||||||    
T  40179687 taatagtttgaaaaaatcacataattcagtgtaattatatgcgtcggtgtcggacacg 40179630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 157 - 220
Target Start/End: Original strand, 13134446 - 13134509
Alignment:
Q  157 cgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    ||||||||| ||| |||||||   ||||||||||||||||||||||||||| |||||| |||||    
T  13134446 cgccgacactgcttataatttaagaaaatcacataatttagtgtaattatatgtgtcgatgtcg 13134509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 159 - 226
Target Start/End: Complemental strand, 31800539 - 31800472
Alignment:
Q  159 ccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    |||||||||||||||||||  |||||| | |||||||| |||||||| |||||||||| ||| |||||    
T  31800539 ccgacacagctaataattttaaaaaattaaataatttaatgtaattacaagtgtcggtatcgtacacg 31800472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 161 - 212
Target Start/End: Original strand, 37203264 - 37203315
Alignment:
Q  161 gacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgt 212  Q
    ||||| |||||||||||| |||||| ||||||||||||||||||| ||||||    
T  37203264 gacacggctaataatttgaaaaaatgacataatttagtgtaattacaagtgt 37203315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 152 - 215
Target Start/End: Original strand, 40613441 - 40613504
Alignment:
Q  152 tgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcgg 215  Q
    |||| ||||||||| ||||||| ||||  |||||||||||||| |||||||||||| |||||||    
T  40613441 tgacacgccgacaccgctaatattttgagaaaatcacataattcagtgtaattatatgtgtcgg 40613504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 161 - 212
Target Start/End: Original strand, 51701258 - 51701309
Alignment:
Q  161 gacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgt 212  Q
    |||||||||||||||||| |||||| |||||||| |||||||||| ||||||    
T  51701258 gacacagctaataatttgaaaaaattacataattgagtgtaattacaagtgt 51701309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 180 - 226
Target Start/End: Complemental strand, 482278 - 482232
Alignment:
Q  180 aaaaatcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    ||||| ||||||||| ||||||||||||| |||||||||||||||||    
T  482278 aaaaaacacataattcagtgtaattataactgtcggtgtcggacacg 482232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 219
Target Start/End: Complemental strand, 5775409 - 5775359
Alignment:
Q  169 taataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtc 219  Q
    ||||||||||  |||||||||||||| |||||||||||| |||||||||||    
T  5775409 taataatttgagaaaatcacataattaagtgtaattatatgtgtcggtgtc 5775359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 167 - 225
Target Start/End: Original strand, 33950142 - 33950200
Alignment:
Q  167 gctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacac 225  Q
    ||||||||||||  |||||||||||||||| |||||| ||| ||||||||||| |||||    
T  33950142 gctaataatttgagaaaatcacataatttaatgtaatcatatgtgtcggtgtcagacac 33950200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 180 - 226
Target Start/End: Complemental strand, 36409552 - 36409506
Alignment:
Q  180 aaaaatcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    |||| ||||||||||||||||||||||| |||||||||||| |||||    
T  36409552 aaaagtcacataatttagtgtaattataggtgtcggtgtcgaacacg 36409506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 180 - 226
Target Start/End: Complemental strand, 36423718 - 36423672
Alignment:
Q  180 aaaaatcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    |||| ||||||||||||||||||||||| |||||||||||| |||||    
T  36423718 aaaagtcacataatttagtgtaattataggtgtcggtgtcgaacacg 36423672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 157 - 220
Target Start/End: Original strand, 50280877 - 50280942
Alignment:
Q  157 cgccgacacagctaataatttgcaaaaatcacataattta--gtgtaattataagtgtcggtgtcg 220  Q
    |||||||||||||||||||||| |||| |||||||||| |  ||||||||| ||||| ||||||||    
T  50280877 cgccgacacagctaataatttgaaaaattcacataattaagtgtgtaattacaagtgccggtgtcg 50280942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 159 - 219
Target Start/End: Complemental strand, 715669 - 715608
Alignment:
Q  159 ccgacacagctaataatttgcaaaaa-tcacataatttagtgtaattataagtgtcggtgtc 219  Q
    |||||||||||||||||||  ||||| |||||||||| |||||||||| |||||| ||||||    
T  715669 ccgacacagctaataatttaaaaaaaatcacataattcagtgtaattacaagtgttggtgtc 715608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 159 - 219
Target Start/End: Complemental strand, 752995 - 752934
Alignment:
Q  159 ccgacacagctaataatttgcaaaaa-tcacataatttagtgtaattataagtgtcggtgtc 219  Q
    |||||||||||||||||||  ||||| |||||||||| |||||||||| |||||| ||||||    
T  752995 ccgacacagctaataatttaaaaaaaatcacataattcagtgtaattacaagtgttggtgtc 752934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 158 - 219
Target Start/End: Original strand, 11931277 - 11931338
Alignment:
Q  158 gccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtc 219  Q
    |||||||| | ||||||| || ||||||||||||||||||||||| |||| |||||| ||||    
T  11931277 gccgacaccgttaataatatgaaaaaatcacataatttagtgtaaatatatgtgtcgatgtc 11931338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 147 - 212
Target Start/End: Complemental strand, 27706250 - 27706185
Alignment:
Q  147 gacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgt 212  Q
    |||| |||| || |||||||  |||||||||  |||||||||||||||||||||||||| ||||||    
T  27706250 gacactgacacgtcgacacaattaataatttaaaaaaatcacataatttagtgtaattacaagtgt 27706185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 152 - 220
Target Start/End: Original strand, 28084512 - 28084581
Alignment:
Q  152 tgacgcgccgacacagctaataatttgcaaaa-atcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    |||| ||||||||||||||| |||||| |||| ||||||||||| | |||||||| ||||||| ||||||    
T  28084512 tgacacgccgacacagctaagaatttgaaaaaaatcacataattcaatgtaattacaagtgtctgtgtcg 28084581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 167 - 220
Target Start/End: Original strand, 30838216 - 30838269
Alignment:
Q  167 gctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    ||||||||||||  ||||| | |||||||||||||||||||||| |||||||||    
T  30838216 gctaataatttgataaaattatataatttagtgtaattataagtatcggtgtcg 30838269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 167 - 220
Target Start/End: Complemental strand, 30982931 - 30982878
Alignment:
Q  167 gctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    |||||| |||||  ||||||||||| || |||||||||||||||||||||||||    
T  30982931 gctaatgatttgagaaaatcacatatttcagtgtaattataagtgtcggtgtcg 30982878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 213
Target Start/End: Complemental strand, 14126174 - 14126118
Alignment:
Q  157 cgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtc 213  Q
    ||||||||| | ||||||||||  ||| |||||||||| ||||||||||||||||||    
T  14126174 cgccgacactgttaataatttgataaagtcacataattcagtgtaattataagtgtc 14126118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 220
Target Start/End: Complemental strand, 22234954 - 22234890
Alignment:
Q  157 cgccgacacagctaataatttgcaaaaa-tcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    ||||||||| ||||| |||||| ||||| |||||||||| ||||||||| || ||||||||||||    
T  22234954 cgccgacaccgctaaaaatttgaaaaaaatcacataattcagtgtaattctatgtgtcggtgtcg 22234890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 168 - 219
Target Start/End: Complemental strand, 7214574 - 7214523
Alignment:
Q  168 ctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtc 219  Q
    |||||||||||  |||||||||||||||| |||||||||| | |||||||||    
T  7214574 ctaataatttgagaaaatcacataatttaatgtaattatatgcgtcggtgtc 7214523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 162 - 225
Target Start/End: Original strand, 16189710 - 16189773
Alignment:
Q  162 acacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacac 225  Q
    |||| ||||| ||||||  |||||||||||||| |||||||||||  ||||||||| |||||||    
T  16189710 acaccgctaaaaatttgagaaaatcacataattcagtgtaattatgtgtgtcggtgacggacac 16189773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 160 - 219
Target Start/End: Complemental strand, 24613761 - 24613702
Alignment:
Q  160 cgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtc 219  Q
    ||||||| |||||||||||  |||||||||||||| | ||||| || |||||||||||||    
T  24613761 cgacacaactaataatttgagaaaatcacataattcaatgtaagtacaagtgtcggtgtc 24613702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 146 - 220
Target Start/End: Complemental strand, 35723459 - 35723384
Alignment:
Q  146 tgacagtgacgcgccgacacagctaataatttgcaaaaat-cacataatttagtgtaattataagtgtcggtgtcg 220  Q
    ||||| |||| ||||||||| ||||||||||||  ||||| ||||||||| | |||||||||| ||||| ||||||    
T  35723459 tgacactgacacgccgacaccgctaataatttgagaaaatacacataattcaatgtaattatatgtgtcagtgtcg 35723384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 160 - 219
Target Start/End: Original strand, 47263985 - 47264044
Alignment:
Q  160 cgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtc 219  Q
    ||||| ||||||||||||| |||||||||||||||  ||||||||| || ||||| ||||    
T  47263985 cgacatagctaataatttgtaaaaatcacataattctgtgtaattacaaatgtcgatgtc 47264044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 220
Target Start/End: Complemental strand, 46084029 - 46083991
Alignment:
Q  182 aaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    |||||||||||| ||||||||||||| ||||||||||||    
T  46084029 aaatcacataatctagtgtaattatatgtgtcggtgtcg 46083991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 220
Target Start/End: Original strand, 4383354 - 4383426
Alignment:
Q  147 gacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    |||| |||| || ||| ||| ||||||||||| ||||||||||||||| |||||||||| || |||| ||||||    
T  4383354 gacactgacacgtcgatacaactaataatttg-aaaaatcacataattcagtgtaattacaaatgtcagtgtcg 4383426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 212
Target Start/End: Complemental strand, 11651207 - 11651142
Alignment:
Q  147 gacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgt 212  Q
    |||| |||| || ||||||||||||||||||  ||||||||||||||| |||| || || ||||||    
T  11651207 gacactgacacgtcgacacagctaataatttaaaaaaatcacataattcagtgcaactacaagtgt 11651142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 214
Target Start/End: Original strand, 24343503 - 24343560
Alignment:
Q  157 cgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcg 214  Q
    ||||||||| | ||||||||||  ||||| |||||||| |||||||||||| ||||||    
T  24343503 cgccgacacggataataatttgagaaaattacataattcagtgtaattataggtgtcg 24343560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 226
Target Start/End: Original strand, 35161056 - 35161101
Alignment:
Q  181 aaaatcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    |||||||||||||| ||||||||||||||| || | ||||||||||    
T  35161056 aaaatcacataattcagtgtaattataagtatcagagtcggacacg 35161101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 212
Target Start/End: Original strand, 36635310 - 36635375
Alignment:
Q  147 gacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgt 212  Q
    |||| |||| |||| ||||  |||||||||||  |||||||||||||| |||||||||||| ||||    
T  36635310 gacactgacacgccaacaccactaataatttgagaaaatcacataattcagtgtaattatatgtgt 36635375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 226
Target Start/End: Original strand, 7377365 - 7377436
Alignment:
Q  157 cgccgacacagctaataatttgcaaaaa--tcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    |||| ||||| ||||||||||| ||| |  ||| |||||||||||||||||||| | |||||||| ||||||    
T  7377365 cgcctacacaactaataatttgaaaagaactcatataatttagtgtaattataaatatcggtgtccgacacg 7377436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 220
Target Start/End: Original strand, 19312354 - 19312394
Alignment:
Q  180 aaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    ||||||||||| ||| ||||||||||||||| |||||||||    
T  19312354 aaaaatcacatgattcagtgtaattataagtatcggtgtcg 19312394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 168 - 216
Target Start/End: Complemental strand, 21658866 - 21658818
Alignment:
Q  168 ctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggt 216  Q
    |||||||||||  |||||||||||||||| | ||||| |||||||||||    
T  21658866 ctaataatttgagaaaatcacataatttactataattttaagtgtcggt 21658818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 220
Target Start/End: Complemental strand, 32273594 - 32273526
Alignment:
Q  152 tgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    |||| |||| ||||| ||||||||||| |||||| |||||||| ||  ||||||||||| ||| |||||    
T  32273594 tgacacgccaacacaactaataatttgaaaaaataacataattcagaataattataagtttcgatgtcg 32273526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 220
Target Start/End: Complemental strand, 38148785 - 38148725
Alignment:
Q  160 cgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    |||||| ||||||| ||||  |||||||||||||| ||||||||| ||| ||||| |||||    
T  38148785 cgacaccgctaatagtttgagaaaatcacataattcagtgtaattttaaatgtcgatgtcg 38148725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 58; Significance: 2e-24; HSPs: 79)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 159 - 232
Target Start/End: Original strand, 7928448 - 7928521
Alignment:
Q  159 ccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacgcctaat 232  Q
    ||||||| |||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||    
T  7928448 ccgacaccgctaataatttgaaaaaatcacataattcagtgtaattatatgtgtcggtgtcggacacgcctaat 7928521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 157 - 226
Target Start/End: Original strand, 55401071 - 55401140
Alignment:
Q  157 cgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    |||||||||| ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||    
T  55401071 cgccgacacaactaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcggacacg 55401140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 141 - 226
Target Start/End: Original strand, 8383237 - 8383322
Alignment:
Q  141 gacactgacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    ||||| |||| |||| ||||||||| ||||||||||||  ||||||| |||||| |||||||||||||||||||||||||||||||    
T  8383237 gacacggacattgacacgccgacaccgctaataatttgagaaaatcatataattcagtgtaattataagtgtcggtgtcggacacg 8383322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 161 - 220
Target Start/End: Original strand, 1509539 - 1509598
Alignment:
Q  161 gacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||    
T  1509539 gacacagctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcg 1509598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 141 - 224
Target Start/End: Complemental strand, 8587100 - 8587017
Alignment:
Q  141 gacactgacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggaca 224  Q
    ||||| |||| |||| |||||||||| ||| ||||||| ||||||||||||||| |||||||||| ||||||||||||||||||    
T  8587100 gacacggacactgacacgccgacacatctagtaatttgaaaaaatcacataattaagtgtaattacaagtgtcggtgtcggaca 8587017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 123 - 226
Target Start/End: Complemental strand, 10318131 - 10318029
Alignment:
Q  123 gacaccgaacatgacatggacactgacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcgga 222  Q
    ||||||| ||| |||| |||||| |||| |||| |||||||||||||||||||||| |||| ||||||  |||||||||| ||||||||||||||||||     
T  10318131 gacaccggacacgacacggacacggacactgacacgccgacacagctaataatttgaaaaagtcacat-ttttagtgtaaatataagtgtcggtgtcggg 10318033  T
Q  223 cacg 226  Q
    ||||    
T  10318032 cacg 10318029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 147 - 225
Target Start/End: Complemental strand, 10268559 - 10268481
Alignment:
Q  147 gacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacac 225  Q
    |||| |||| ||||||||||| |||||||||| |||||||||||||||||||||||||| ||||||| ||||| |||||    
T  10268559 gacactgacacgccgacacagttaataatttgaaaaaatcacataatttagtgtaattacaagtgtcagtgtcagacac 10268481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 152 - 226
Target Start/End: Original strand, 10954943 - 10955017
Alignment:
Q  152 tgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    |||| |||||||||| ||||||||||| ||||||||||||||| |||||||| | ||||||||||||||||||||    
T  10954943 tgacacgccgacacaactaataatttgaaaaaatcacataattcagtgtaatcacaagtgtcggtgtcggacacg 10955017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 152 - 220
Target Start/End: Original strand, 28917992 - 28918060
Alignment:
Q  152 tgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    |||| |||||||| ||||||||||||| ||||||||||||||| |||||||||| ||||||||||||||    
T  28917992 tgacacgccgacatagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcg 28918060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 167 - 231
Target Start/End: Complemental strand, 49505207 - 49505143
Alignment:
Q  167 gctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacgcctaa 231  Q
    ||||||||||||  ||||||||||||||||||||||||||| ||||| |||||||||||||||||    
T  49505207 gctaataatttgagaaaatcacataatttagtgtaattatatgtgtcagtgtcggacacgcctaa 49505143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 161 - 225
Target Start/End: Complemental strand, 51206412 - 51206348
Alignment:
Q  161 gacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacac 225  Q
    |||||||||||||||||| ||||||||||||||| ||||||| || |||||||||||||||||||    
T  51206412 gacacagctaataatttgaaaaaatcacataattcagtgtaaatacaagtgtcggtgtcggacac 51206348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 147 - 221
Target Start/End: Original strand, 21479104 - 21479178
Alignment:
Q  147 gacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcgg 221  Q
    |||| |||| |||||||||||||||||||||| |||||||||| |||| ||||||||||  ||||||||||||||    
T  21479104 gacactgacacgccgacacagctaataatttgaaaaaatcacacaattcagtgtaattactagtgtcggtgtcgg 21479178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 158 - 220
Target Start/End: Original strand, 27505243 - 27505305
Alignment:
Q  158 gccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    ||||||||||||||||||||  ||||||||||||||| |||||||||| ||||||||||||||    
T  27505243 gccgacacagctaataatttttaaaaatcacataattaagtgtaattacaagtgtcggtgtcg 27505305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 152 - 217
Target Start/End: Complemental strand, 4987359 - 4987294
Alignment:
Q  152 tgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtg 217  Q
    |||| |||||||||||||||||||||| ||||||||||||||| |||||||||| |||||| ||||    
T  4987359 tgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgttggtg 4987294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 141 - 226
Target Start/End: Complemental strand, 10335365 - 10335280
Alignment:
Q  141 gacactgacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    ||||| |||| |||| |||||||||| ||||||||||| |||| ||||||| |||||||||| || ||||||||||||||| ||||    
T  10335365 gacacggacactgacacgccgacacaactaataatttgaaaaagtcacatattttagtgtaaatacaagtgtcggtgtcgggcacg 10335280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 141 - 226
Target Start/End: Complemental strand, 16000095 - 16000010
Alignment:
Q  141 gacactgacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    ||||| |||| |||| |||||||||| ||||||||||  |||||| |||||||| ||||||| || ||||||||||||||||||||    
T  16000095 gacacagacactgacacgccgacacaactaataatttaaaaaaataacataattcagtgtaactacaagtgtcggtgtcggacacg 16000010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 141 - 226
Target Start/End: Complemental strand, 26492284 - 26492199
Alignment:
Q  141 gacactgacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    ||||| |||| |||| |||||||| ||||||||||||| |||||||| | |||| |||||||||| |||| |||||||||||||||    
T  26492284 gacacggacactgacacgccgacagagctaataatttgaaaaaatcatacaattcagtgtaattacaagtatcggtgtcggacacg 26492199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 152 - 217
Target Start/End: Original strand, 26508101 - 26508166
Alignment:
Q  152 tgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtg 217  Q
    |||| ||| |||||||||||||||||| ||||||||||||||| |||||||||| |||||||||||    
T  26508101 tgacacgctgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtg 26508166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 147 - 220
Target Start/End: Complemental strand, 34185196 - 34185123
Alignment:
Q  147 gacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    ||||||||| ||||||||| |||||||||||  |||||||||| |||| |||||||||| ||||||||||||||    
T  34185196 gacagtgacacgccgacacggctaataatttcaaaaaatcacacaattcagtgtaattacaagtgtcggtgtcg 34185123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 158 - 226
Target Start/End: Complemental strand, 35994799 - 35994733
Alignment:
Q  158 gccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||||| ||||||| ||||||||||||    
T  35994799 gccgacacagctaataatttg-aaaaatcacataattcagtgtaattacaagtgtc-gtgtcggacacg 35994733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 141 - 220
Target Start/End: Original strand, 14829670 - 14829748
Alignment:
Q  141 gacactgacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    ||||| |||| |||| |||||||||||||||||||||| ||||||||||||||| |  ||||||| ||||||||||||||    
T  14829670 gacacagacactgacacgccgacacagctaataatttg-aaaaatcacataattcatggtaattacaagtgtcggtgtcg 14829748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 141 - 220
Target Start/End: Complemental strand, 15796373 - 15796294
Alignment:
Q  141 gacactgacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    ||||| |||| |||| ||||||||||| |||||||||| |||||||| |||||| |||||||||| || |||||||||||    
T  15796373 gacacggacaatgacacgccgacacagttaataatttgaaaaaatcatataattcagtgtaattacaattgtcggtgtcg 15796294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 147 - 226
Target Start/End: Original strand, 20503451 - 20503530
Alignment:
Q  147 gacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    |||| |||| |||||||||| | ||||||||| |||||| |||||||| |||||||||| |||||||||||| |||||||    
T  20503451 gacactgacacgccgacacaacaaataatttgaaaaaatgacataattcagtgtaattacaagtgtcggtgttggacacg 20503530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 141 - 220
Target Start/End: Complemental strand, 25948966 - 25948887
Alignment:
Q  141 gacactgacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    ||||| |||| ||||  ||||| || |||||||||||| ||||||||||||||| ||||||||||||||||| |||||||    
T  25948966 gacacggacactgacatgccgatacggctaataatttgaaaaaatcacataattcagtgtaattataagtgttggtgtcg 25948887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 157 - 220
Target Start/End: Original strand, 34910313 - 34910376
Alignment:
Q  157 cgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    |||||||||| ||||||||||| ||||||||||||||| |||||||||| ||| ||||||||||    
T  34910313 cgccgacacaactaataatttgaaaaaatcacataattcagtgtaattacaagagtcggtgtcg 34910376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 147 - 220
Target Start/End: Original strand, 14747547 - 14747621
Alignment:
Q  147 gacagtgacgcgccgacacagctaataatttgcaaaa-atcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    |||| |||| |||||||||||||||||||||| |||| |||||||||||||||||||||| ||| ||| ||||||    
T  14747547 gacactgacacgccgacacagctaataatttgaaaaaaatcacataatttagtgtaattacaagggtccgtgtcg 14747621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 158 - 220
Target Start/End: Complemental strand, 49651848 - 49651786
Alignment:
Q  158 gccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    |||||||| |||||||||||| ||||||||||||||| | |||||||| ||||||||||||||    
T  49651848 gccgacacggctaataatttgaaaaaatcacataattcactgtaattacaagtgtcggtgtcg 49651786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 141 - 206
Target Start/End: Original strand, 25064889 - 25064954
Alignment:
Q  141 gacactgacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattat 206  Q
    ||||| |||| |||| ||||||||| |||||| ||||| |||||||||||||||||||||||||||    
T  25064889 gacacagacattgacacgccgacaccgctaatgatttgaaaaaatcacataatttagtgtaattat 25064954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 135 - 226
Target Start/End: Original strand, 25775481 - 25775574
Alignment:
Q  135 gacatggacactg-acagtgacgcgccgacacagctaataatttgcaaa-aatcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    |||| |||||||| ||| |||| |||| |||||  |||||||||| ||| |||||||||||| |||||||||| ||||||||||||||||||||    
T  25775481 gacacggacactggacactgacacgccaacacatttaataatttgaaaataatcacataattcagtgtaattacaagtgtcggtgtcggacacg 25775574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 141 - 218
Target Start/End: Original strand, 55212943 - 55213020
Alignment:
Q  141 gacactgacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgt 218  Q
    ||||| ||||||||   |||||||||| |||||||||  |||||||||||||||||||| ||||| ||||||||||||    
T  55212943 gacacagacagtgatatgccgacacagttaataattttaaaaaatcacataatttagtgcaattacaagtgtcggtgt 55213020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 141 - 225
Target Start/End: Original strand, 25093482 - 25093566
Alignment:
Q  141 gacactgacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacac 225  Q
    |||||||||| | || ||||||||| | |||| |||||  ||||||||| |||| |||||||||||| |||||||||||||||||    
T  25093482 gacactgacactaacacgccgacactgttaatgatttgagaaaatcacacaattcagtgtaattatatgtgtcggtgtcggacac 25093566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 159 - 226
Target Start/End: Complemental strand, 8789611 - 8789544
Alignment:
Q  159 ccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    ||||||| ||| ||||||||  ||||||||||||||  ||||||||||| ||||||||||||||||||    
T  8789611 ccgacacggcttataatttgagaaaatcacataattccgtgtaattatatgtgtcggtgtcggacacg 8789544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 157 - 220
Target Start/End: Original strand, 14209109 - 14209172
Alignment:
Q  157 cgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    |||||||||| ||||||||||  ||||||||||||||| |||||||||| ||||||| ||||||    
T  14209109 cgccgacacaactaataattttaaaaaatcacataattcagtgtaattacaagtgtcagtgtcg 14209172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 157 - 204
Target Start/End: Original strand, 14979177 - 14979224
Alignment:
Q  157 cgccgacacagctaataatttgcaaaaatcacataatttagtgtaatt 204  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||||    
T  14979177 cgccgacacagctaataatttgaaaaaatcacataattcagtgtaatt 14979224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 161 - 216
Target Start/End: Complemental strand, 21257045 - 21256990
Alignment:
Q  161 gacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggt 216  Q
    |||||||||||||||||| ||||||||||||||| ||| |||||| ||||||||||    
T  21257045 gacacagctaataatttgaaaaaatcacataattcagtataattacaagtgtcggt 21256990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 157 - 220
Target Start/End: Original strand, 28812511 - 28812574
Alignment:
Q  157 cgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    |||||||||| ||||||||||| | ||||||||||||| |||||| ||| ||||||||||||||    
T  28812511 cgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 28812574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 140 - 223
Target Start/End: Original strand, 33359740 - 33359823
Alignment:
Q  140 ggacactgacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggac 223  Q
    |||||| |||| |||| ||| |||||||||||||||||| |||  ||||||| |||||||||| || ||||||| |||||||||    
T  33359740 ggacacagacactgacacgctgacacagctaataatttgaaaaggtcacatattttagtgtaaatacaagtgtcagtgtcggac 33359823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 160 - 226
Target Start/End: Complemental strand, 40993396 - 40993329
Alignment:
Q  160 cgacacagctaataatttgcaaaaa-tcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    |||||| |||||||||||  ||||| |||||||||| |||||||||||| ||||||||||||||||||    
T  40993396 cgacaccgctaataatttaaaaaaaatcacataattcagtgtaattatatgtgtcggtgtcggacacg 40993329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 157 - 215
Target Start/End: Original strand, 1514613 - 1514671
Alignment:
Q  157 cgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcgg 215  Q
    ||||||||| |||||||||||| || || | ||||||||||||||||||||||||||||    
T  1514613 cgccgacaccgctaataatttgaaagaaacgcataatttagtgtaattataagtgtcgg 1514671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 159 - 212
Target Start/End: Complemental strand, 11313861 - 11313808
Alignment:
Q  159 ccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgt 212  Q
    ||||||| ||||||||||||  ||||||||||||||||||||||||||| ||||    
T  11313861 ccgacactgctaataatttgagaaaatcacataatttagtgtaattatatgtgt 11313808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 167 - 220
Target Start/End: Original strand, 11665950 - 11666003
Alignment:
Q  167 gctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    ||||||||||||  ||||||||| ||||||||||||||||| ||||||||||||    
T  11665950 gctaataatttgataaaatcacacaatttagtgtaattatatgtgtcggtgtcg 11666003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 161 - 224
Target Start/End: Original strand, 8593136 - 8593200
Alignment:
Q  161 gacacagctaataatttgcaaaa-atcacataatttagtgtaattataagtgtcggtgtcggaca 224  Q
    |||||||||| ||||||| |||| ||||||||||| ||| |||||| ||||||||||||||||||    
T  8593136 gacacagctactaatttggaaaaaatcacataattcagtataattacaagtgtcggtgtcggaca 8593200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 172 - 220
Target Start/End: Complemental strand, 15314924 - 15314876
Alignment:
Q  172 taatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    ||||||| |||||||||||||||||||||||||||| |||| |||||||    
T  15314924 taatttgaaaaaatcacataatttagtgtaattatatgtgttggtgtcg 15314876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 141 - 225
Target Start/End: Complemental strand, 24205120 - 24205037
Alignment:
Q  141 gacactgacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacac 225  Q
    ||||| |||| |||| ||||||||| | ||||||||||  ||||| |||||||  |||||||||||||||||| |||||||||||    
T  24205120 gacacggacactgacacgccgacacggataataatttgagaaaatgacataatacagtgtaattataagtgtc-gtgtcggacac 24205037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 157 - 220
Target Start/End: Original strand, 14832095 - 14832158
Alignment:
Q  157 cgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    |||||| ||||||||||||||| ||||||||||||| | | |||||||| ||||||| ||||||    
T  14832095 cgccgatacagctaataatttgaaaaaatcacataactcaatgtaattacaagtgtcagtgtcg 14832158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 158 - 213
Target Start/End: Complemental strand, 32804602 - 32804547
Alignment:
Q  158 gccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtc 213  Q
    |||||||| | ||||||||||  ||||||||||||||||||||||||||| |||||    
T  32804602 gccgacaccgttaataatttgagaaaatcacataatttagtgtaattatatgtgtc 32804547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 147 - 194
Target Start/End: Original strand, 40052318 - 40052365
Alignment:
Q  147 gacagtgacgcgccgacacagctaataatttgcaaaaatcacataatt 194  Q
    |||| |||| |||||||||||||||||||||| |||||||||||||||    
T  40052318 gacactgacacgccgacacagctaataatttgaaaaaatcacataatt 40052365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 141 - 220
Target Start/End: Complemental strand, 41961729 - 41961650
Alignment:
Q  141 gacactgacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    ||||| |||| |||| ||||| |||| ||||||||||| ||| ||||||| |||  ||||||||| ||||||||||||||    
T  41961729 gacacagacactgacacgccgtcacaactaataatttgaaaatatcacattattcggtgtaattacaagtgtcggtgtcg 41961650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 160 - 202
Target Start/End: Complemental strand, 3164085 - 3164043
Alignment:
Q  160 cgacacagctaataatttgcaaaaatcacataatttagtgtaa 202  Q
    ||||||||||||||||||| ||||||||||||||| |||||||    
T  3164085 cgacacagctaataatttgaaaaaatcacataattcagtgtaa 3164043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 168 - 218
Target Start/End: Complemental strand, 17005671 - 17005621
Alignment:
Q  168 ctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgt 218  Q
    |||||||||||  ||||||| |||||| |||||||||||||||||||||||    
T  17005671 ctaataatttgataaaatcatataattcagtgtaattataagtgtcggtgt 17005621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 38731224 - 38731278
Alignment:
Q  167 gctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcgg 221  Q
    |||||||||||  ||||||||||||||| |||||| ||||| |||||||||||||    
T  38731224 gctaataattttaaaaaatcacataattcagtgtagttatatgtgtcggtgtcgg 38731278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 157 - 222
Target Start/End: Original strand, 18426945 - 18427010
Alignment:
Q  157 cgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcgga 222  Q
    |||||||||  ||||||||||  |||||||||||||||  |||||||||||  |||||||||||||    
T  18426945 cgccgacaccactaataatttcaaaaaatcacataattcggtgtaattatatatgtcggtgtcgga 18427010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 161 - 206
Target Start/End: Complemental strand, 27277897 - 27277852
Alignment:
Q  161 gacacagctaataatttgcaaaaatcacataatttagtgtaattat 206  Q
    ||||| ||||||||||||  ||||||||||||||||||||||||||    
T  27277897 gacactgctaataatttgagaaaatcacataatttagtgtaattat 27277852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 147 - 226
Target Start/End: Complemental strand, 32400778 - 32400702
Alignment:
Q  147 gacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    |||| |||| || ||||||||||||||||||| ||| || ||||||||   |||||||| ||||||| ||||||||||||    
T  32400778 gacactgacacggcgacacagctaataatttgaaaagattacataatt---tgtaattacaagtgtccgtgtcggacacg 32400702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 161 - 214
Target Start/End: Complemental strand, 34307839 - 34307786
Alignment:
Q  161 gacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcg 214  Q
    ||||| ||||||||||||  ||||||||||| || |||||||||||||||||||    
T  34307839 gacaccgctaataatttgagaaaatcacatatttcagtgtaattataagtgtcg 34307786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 147 - 220
Target Start/End: Original strand, 39756222 - 39756295
Alignment:
Q  147 gacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    |||| |||| |||||||| |  |||||||||  ||||||||||||||||| | |||||| ||||||||||||||    
T  39756222 gacactgacacgccgacaaaattaataatttaaaaaaatcacataatttaatataattacaagtgtcggtgtcg 39756295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 226
Target Start/End: Original strand, 7171499 - 7171566
Alignment:
Q  158 gccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    ||||||||||||  ||||||| |||||||| ||||||  ||||||||| |||||| |||||||||||||    
T  7171499 gccgacacagcttgtaatttg-aaaaatcatataattcggtgtaattacaagtgttggtgtcggacacg 7171566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 152 - 220
Target Start/End: Complemental strand, 8039903 - 8039835
Alignment:
Q  152 tgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    |||| |||| |||| ||||||||||||  ||||| | |||||| |||||||||||| ||||||||||||    
T  8039903 tgacacgccaacaccgctaataatttgagaaaattatataattcagtgtaattatatgtgtcggtgtcg 8039835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 226
Target Start/End: Original strand, 8842327 - 8842394
Alignment:
Q  158 gccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    |||||||| |||||||||||  |||| ||||||||||| |||||||||||  |||||||||| ||||||    
T  8842327 gccgacaccgctaataattttgaaaa-tcacataatttggtgtaattatatatgtcggtgtcagacacg 8842394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 152 - 220
Target Start/End: Original strand, 9800031 - 9800099
Alignment:
Q  152 tgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    |||| |||||||||  |||||||||||  ||||| ||||||||  |||||||| |||||||||||||||    
T  9800031 tgacacgccgacacctctaataatttgagaaaattacataattccgtgtaattgtaagtgtcggtgtcg 9800099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 225
Target Start/End: Original strand, 15864829 - 15864896
Alignment:
Q  157 cgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacac 225  Q
    ||||||||| | |||||||||| |||||| | ||||||||||||||| ||| ||||| |||||||||||    
T  15864829 cgccgacacggataataatttgaaaaaatgatataatttagtgtaatcataggtgtc-gtgtcggacac 15864896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 226
Target Start/End: Original strand, 45451554 - 45451618
Alignment:
Q  162 acacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    |||| ||||||||||||  ||||||||||| || ||| |||| ||| ||||||||||||||||||    
T  45451554 acactgctaataatttgagaaaatcacatacttcagtataataatatgtgtcggtgtcggacacg 45451618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 157 - 220
Target Start/End: Original strand, 1550136 - 1550199
Alignment:
Q  157 cgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    |||| |||| |||||||||||| ||||||||||  ||| |||||||||||| ||||| ||||||    
T  1550136 cgccaacaccgctaataatttgaaaaaatcacactattcagtgtaattataggtgtcagtgtcg 1550199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 169 - 224
Target Start/End: Original strand, 4201404 - 4201459
Alignment:
Q  169 taataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggaca 224  Q
    |||||||||| ||||||||||||||| ||||||||||||  ||| |||||| ||||    
T  4201404 taataatttgaaaaaatcacataattaagtgtaattatatatgttggtgtccgaca 4201459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 159 - 226
Target Start/End: Complemental strand, 7614476 - 7614409
Alignment:
Q  159 ccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    ||||||||| |||||||||   |||||||||||||| ||| ||||||||  ||||||||||| |||||    
T  7614476 ccgacacagttaataatttaagaaaatcacataattcagtataattatatatgtcggtgtcgaacacg 7614409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 167 - 225
Target Start/End: Original strand, 11251984 - 11252040
Alignment:
Q  167 gctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacac 225  Q
    ||||||||||||  |||||||||||||| |||||||||||  ||||||||||| |||||    
T  11251984 gctaataatttgagaaaatcacataattcagtgtaattat--gtgtcggtgtcagacac 11252040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 232
Target Start/End: Complemental strand, 11507514 - 11507463
Alignment:
Q  181 aaaatcacataatttagtgtaattataagtgtcggtgtcggacacgcctaat 232  Q
    |||||||||||||| |||||||||||| || ||||| |||||||||| ||||    
T  11507514 aaaatcacataattcagtgtaattatatgtttcggtatcggacacgcgtaat 11507463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 169 - 220
Target Start/End: Original strand, 16789020 - 16789071
Alignment:
Q  169 taataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    |||||||||  |||||||| |||||| ||||||||||||||||| |||||||    
T  16789020 taataatttaaaaaaatcatataattcagtgtaattataagtgttggtgtcg 16789071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 224
Target Start/End: Original strand, 35222958 - 35223001
Alignment:
Q  181 aaaatcacataatttagtgtaattataagtgtcggtgtcggaca 224  Q
    |||||||||||||| | |||||||||| ||||||||||||||||    
T  35222958 aaaatcacataattcaatgtaattatatgtgtcggtgtcggaca 35223001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 220
Target Start/End: Original strand, 28678300 - 28678362
Alignment:
Q  158 gccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    |||||| | |||||||||||   |||||||||||||||||| ||||| || ||||||||||||    
T  28678300 gccgacgctgctaataatttaataaaatcacataatttagtataattgtatgtgtcggtgtcg 28678362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 214
Target Start/End: Original strand, 29508451 - 29508497
Alignment:
Q  168 ctaataatttgcaaaaatcacataatttagtgtaattataagtgtcg 214  Q
    ||||||||||| |||||||| |||||| |||||||||||| ||||||    
T  29508451 ctaataatttgaaaaaatcatataattcagtgtaattatatgtgtcg 29508497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 226
Target Start/End: Original strand, 2941578 - 2941623
Alignment:
Q  181 aaaatcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    ||||||||| |||  |||||||||||| ||||||||||||||||||    
T  2941578 aaaatcacaaaatacagtgtaattatatgtgtcggtgtcggacacg 2941623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 190
Target Start/End: Complemental strand, 3865635 - 3865586
Alignment:
Q  141 gacactgacagtgacgcgccgacacagctaataatttgcaaaaatcacat 190  Q
    ||||| |||| |||| |||||||||||||||||||||| ||||| |||||    
T  3865635 gacacggacactgacacgccgacacagctaataatttgaaaaaaccacat 3865586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 213
Target Start/End: Original strand, 11610512 - 11610573
Alignment:
Q  152 tgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtc 213  Q
    |||| |||| |||| |||||||||||  ||||||||||||||| |||||| ||| |||||||    
T  11610512 tgacacgccaacaccgctaataatttaaaaaaatcacataattcagtgtagttacaagtgtc 11610573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 226
Target Start/End: Complemental strand, 13845564 - 13845519
Alignment:
Q  181 aaaatcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    ||||||||| |||  |||||||||||| ||||||||||||||||||    
T  13845564 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacg 13845519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 225
Target Start/End: Complemental strand, 15505830 - 15505785
Alignment:
Q  180 aaaaatcacataatttagtgtaattataagtgtcggtgtcggacac 225  Q
    |||||| | |||||| ||||||||||||||||| ||||||||||||    
T  15505830 aaaaattatataattcagtgtaattataagtgttggtgtcggacac 15505785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 220
Target Start/End: Complemental strand, 750678 - 750618
Alignment:
Q  160 cgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    ||||||| ||||||||||| ||| |||||||||||   || ||||| ||||||||||||||    
T  750678 cgacacaactaataatttgaaaatatcacataattcgctgcaattacaagtgtcggtgtcg 750618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 225
Target Start/End: Original strand, 13414489 - 13414533
Alignment:
Q  181 aaaatcacataatttagtgtaattataagtgtcggtgtcggacac 225  Q
    ||||||| |||||| | |||||||||| |||||||||||||||||    
T  13414489 aaaatcaaataattcaatgtaattatatgtgtcggtgtcggacac 13414533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 225
Target Start/End: Original strand, 20691327 - 20691383
Alignment:
Q  169 taataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacac 225  Q
    ||||||||||  ||||| |||||||| |||||||| ||| ||||||||||| |||||    
T  20691327 taataatttgagaaaatgacataattcagtgtaatcatatgtgtcggtgtcagacac 20691383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 57; Significance: 8e-24; HSPs: 65)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 141 - 232
Target Start/End: Complemental strand, 19536477 - 19536385
Alignment:
Q  141 gacactgacagtgacgcgccgacacagctaataatttgcaaaaa-tcacataatttagtgtaattataagtgtcggtgtcggacacgcctaat 232  Q
    ||||| |||| |||| |||||||||| ||||||||||| ||||| |||||||||| |||||||||| ||||||||||||||||||||||||||    
T  19536477 gacacggacaatgacacgccgacacaactaataatttgaaaaaaatcacataattcagtgtaattacaagtgtcggtgtcggacacgcctaat 19536385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 140 - 223
Target Start/End: Original strand, 37558956 - 37559039
Alignment:
Q  140 ggacactgacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggac 223  Q
    |||||| |||| |||| |||||||||||||||||||||| ||||||||||||||| | |||||||| |||||||||||||||||    
T  37558956 ggacacggacactgacacgccgacacagctaataatttgtaaaaatcacataattcaatgtaattacaagtgtcggtgtcggac 37559039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 161 - 245
Target Start/End: Complemental strand, 18256039 - 18255955
Alignment:
Q  161 gacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacgcctaattcaaaaagtgtcc 245  Q
    ||||||| |||||||||  ||||||||||||||||| |||||||| |||||||||||||||||||||||||| |||  |||||||    
T  18256039 gacacagataataatttaaaaaaatcacataatttaatgtaattagaagtgtcggtgtcggacacgcctaatccaaggagtgtcc 18255955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 141 - 220
Target Start/End: Complemental strand, 20539753 - 20539674
Alignment:
Q  141 gacactgacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    ||||| |||| |||| || ||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||    
T  20539753 gacacggacactgacacgtcgacacagctaataatttgaaaaaatcatataatttagtgtaattacaagtgtcggtgtcg 20539674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 161 - 226
Target Start/End: Complemental strand, 2438778 - 2438713
Alignment:
Q  161 gacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    |||||||||||||||||  ||||||||||||||| |||||||||| ||||||||||||||||||||    
T  2438778 gacacagctaataatttcaaaaaatcacataattcagtgtaattacaagtgtcggtgtcggacacg 2438713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 141 - 226
Target Start/End: Complemental strand, 30404929 - 30404844
Alignment:
Q  141 gacactgacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    ||||| |||| |||| ||||||||| | |||||||||| ||||||||||||||| |||||||||| ||||||||| ||||||||||    
T  30404929 gacacggacactgacacgccgacacggttaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggcgtcggacacg 30404844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 147 - 225
Target Start/End: Complemental strand, 38117232 - 38117154
Alignment:
Q  147 gacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacac 225  Q
    |||| |||| |||||||||||||||||||||| |||||||||||| ||  ||||||||| |||||| ||||||||||||    
T  38117232 gacactgacacgccgacacagctaataatttgaaaaaatcacatacttcggtgtaattacaagtgttggtgtcggacac 38117154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 141 - 226
Target Start/End: Original strand, 15972853 - 15972938
Alignment:
Q  141 gacactgacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    ||||| |||| |||| ||||||||||  |||||||||| |||||| ||| |||| |||||||||| ||||||||||||||||||||    
T  15972853 gacacggacactgacacgccgacacaattaataatttgaaaaaattacacaattcagtgtaattacaagtgtcggtgtcggacacg 15972938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 167 - 232
Target Start/End: Complemental strand, 34691858 - 34691793
Alignment:
Q  167 gctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacgcctaat 232  Q
    ||||||||||||  ||||||| |||||| |||||||||||| ||||||||||||||||||||||||    
T  34691858 gctaataatttgataaaatcatataattcagtgtaattatatgtgtcggtgtcggacacgcctaat 34691793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 167 - 232
Target Start/End: Complemental strand, 34714270 - 34714205
Alignment:
Q  167 gctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacgcctaat 232  Q
    ||||||||||||  ||||||| |||||| |||||||||||| ||||||||||||||||||||||||    
T  34714270 gctaataatttgataaaatcatataattcagtgtaattatatgtgtcggtgtcggacacgcctaat 34714205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 152 - 220
Target Start/End: Complemental strand, 12668491 - 12668423
Alignment:
Q  152 tgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    |||| |||||||| | ||||||||||| |||||| |||||||| |||||||||||||||||||||||||    
T  12668491 tgacacgccgacataactaataatttgaaaaaatgacataattcagtgtaattataagtgtcggtgtcg 12668423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 141 - 219
Target Start/End: Complemental strand, 14996303 - 14996224
Alignment:
Q  141 gacactgacagtgacgcgccgacacagctaataatttgcaaaaa-tcacataatttagtgtaattataagtgtcggtgtc 219  Q
    ||||| |||| ||||  ||||||||||||||||||||| ||||| ||| ||||||||||||||||| |||||||||||||    
T  14996303 gacacggacactgacaagccgacacagctaataatttgaaaaaaatcatataatttagtgtaattacaagtgtcggtgtc 14996224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 147 - 226
Target Start/End: Complemental strand, 18841086 - 18841007
Alignment:
Q  147 gacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    |||| |||| ||| |||||| ||||||||||| |||||| |||||||| |||||||||| ||||||||||||| ||||||    
T  18841086 gacactgacacgctgacacaactaataatttgaaaaaattacataattaagtgtaattacaagtgtcggtgtcagacacg 18841007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 157 - 220
Target Start/End: Original strand, 30335413 - 30335476
Alignment:
Q  157 cgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    |||||||||| ||||||||||| |||||| ||||||||||||||||||| || |||||||||||    
T  30335413 cgccgacacaactaataatttgaaaaaatgacataatttagtgtaattacaaatgtcggtgtcg 30335476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 147 - 226
Target Start/End: Original strand, 31018576 - 31018655
Alignment:
Q  147 gacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    |||| |||| |||| |||| |||||||||||   |||||||||| |||||||||||||||| ||||||||||||||||||    
T  31018576 gacactgacacgccaacaccgctaataatttcagaaaatcacatgatttagtgtaattataggtgtcggtgtcggacacg 31018655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 141 - 220
Target Start/End: Complemental strand, 36756423 - 36756344
Alignment:
Q  141 gacactgacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    ||||| |||| |||| || ||||||| ||||||||||| | |||| |||||||| |||||||||||||||||||||||||    
T  36756423 gacacagacactgacacgtcgacacaactaataatttgaagaaataacataattcagtgtaattataagtgtcggtgtcg 36756344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 141 - 226
Target Start/End: Original strand, 21624246 - 21624332
Alignment:
Q  141 gacactgacagtgacgcgccgacacagctaataatttgcaaaaatca-cataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    ||||| |||| |||| |||||||||||||||||||||  |||||  | ||||||| |||||||||| ||||||||||||||||||||    
T  21624246 gacacagacactgacacgccgacacagctaataattttaaaaaaatagcataattcagtgtaattacaagtgtcggtgtcggacacg 21624332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 141 - 226
Target Start/End: Original strand, 6940235 - 6940320
Alignment:
Q  141 gacactgacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    ||||| |||| |||| |||||||||||||||||||||  |||| | |||||||| |||||||||| |||||||||| || ||||||    
T  6940235 gacacggacactgacacgccgacacagctaataattttaaaaagttacataattaagtgtaattacaagtgtcggtatccgacacg 6940320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 140 - 213
Target Start/End: Complemental strand, 21374779 - 21374706
Alignment:
Q  140 ggacactgacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtc 213  Q
    |||||| |||| | || |||||||||||||||||||||| |||||| |||||||| |||||||||| |||||||    
T  21374779 ggacacggacactaacacgccgacacagctaataatttgaaaaaattacataattcagtgtaattacaagtgtc 21374706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 159 - 220
Target Start/End: Complemental strand, 30717591 - 30717530
Alignment:
Q  159 ccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    |||||| ||||||||||||| ||||||||||||||| |||||||||| |||||||| |||||    
T  30717591 ccgacaaagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcgatgtcg 30717530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 141 - 225
Target Start/End: Original strand, 18421943 - 18422027
Alignment:
Q  141 gacactgacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacac 225  Q
    ||||| |||| |||| ||||||||||  |||||||||  ||| ||||||||||| |||||||||| |||||||||||||| ||||    
T  18421943 gacacggacactgacacgccgacacaattaataatttaaaaatatcacataattcagtgtaattacaagtgtcggtgtcgaacac 18422027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 157 - 221
Target Start/End: Original strand, 28677905 - 28677968
Alignment:
Q  157 cgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcgg 221  Q
    ||||||||| |||||||||||| ||||||||||||||| |||||||||||| || ||||||||||    
T  28677905 cgccgacaccgctaataatttgaaaaaatcacataattcagtgtaattatatgt-tcggtgtcgg 28677968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 128 - 216
Target Start/End: Complemental strand, 30527687 - 30527599
Alignment:
Q  128 cgaacatgacatggacactgacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggt 216  Q
    |||||| |||| ||||||||||| |||| | || |||| | ||||||||||  ||||||| ||||||||||||||||||| ||||||||    
T  30527687 cgaacacgacacggacactgacactgacacacccacactgttaataatttgagaaaatcatataatttagtgtaattatatgtgtcggt 30527599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 158 - 226
Target Start/End: Original strand, 5040729 - 5040799
Alignment:
Q  158 gccgacacagctaataatttgcaaaa--atcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    ||||| ||||||||||||||| ||||  ||||||||||| | |||||||| ||||||||||||||||||||    
T  5040729 gccgatacagctaataatttgaaaaaaaatcacataattcaatgtaattacaagtgtcggtgtcggacacg 5040799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 157 - 220
Target Start/End: Original strand, 15657860 - 15657923
Alignment:
Q  157 cgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    ||||||| || ||||||||||| ||||||||||||||| |||||||||| || |||||||||||    
T  15657860 cgccgactcaactaataatttgtaaaaatcacataattcagtgtaattacaaatgtcggtgtcg 15657923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 168 - 226
Target Start/End: Original strand, 5367199 - 5367257
Alignment:
Q  168 ctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    |||||||||||   ||||||||||||| |||||||||||| ||||||||||||||||||    
T  5367199 ctaataatttgaggaaatcacataattcagtgtaattatatgtgtcggtgtcggacacg 5367257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 11223922 - 11223864
Alignment:
Q  161 gacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtc 219  Q
    ||||||||||||| |||| |||||| |||||||| |||||||||| |||||||||||||    
T  11223922 gacacagctaatattttgaaaaaataacataattcagtgtaattacaagtgtcggtgtc 11223864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 147 - 225
Target Start/End: Complemental strand, 20242800 - 20242722
Alignment:
Q  147 gacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacac 225  Q
    |||| |||| |||||||||| |||||  |||   |||||||||||||| |||||||||||| |||||||||||||||||    
T  20242800 gacactgacacgccgacacaactaatttttttagaaaatcacataattcagtgtaattatatgtgtcggtgtcggacac 20242722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 142 - 212
Target Start/End: Original strand, 24894370 - 24894440
Alignment:
Q  142 acactgacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgt 212  Q
    |||| |||| |||| |||||||||||||||||||||  ||||||||||||||| |||| ||||| ||||||    
T  24894370 acacggacactgacacgccgacacagctaataatttaaaaaaatcacataattcagtgcaattaaaagtgt 24894440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 158 - 219
Target Start/End: Complemental strand, 36409689 - 36409630
Alignment:
Q  158 gccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtc 219  Q
    |||||||| ||| |||||||| |||||||||||||||||||||||||||  |||||||||||    
T  36409689 gccgacaccgctgataatttgaaaaaatcacataatttagtgtaattat--gtgtcggtgtc 36409630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 141 - 226
Target Start/End: Original strand, 20473302 - 20473387
Alignment:
Q  141 gacactgacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    ||||| |||| ||||  ||||||||| ||||||||||  |||| ||| |||||| |||||||||| |||||||| |||||||||||    
T  20473302 gacacagacactgacatgccgacacaactaataatttaaaaaactcatataattcagtgtaattacaagtgtcgatgtcggacacg 20473387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 226
Target Start/End: Complemental strand, 20922967 - 20922922
Alignment:
Q  181 aaaatcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    ||||||||||||||||||||||||||| ||||| ||||||||||||    
T  20922967 aaaatcacataatttagtgtaattatatgtgtctgtgtcggacacg 20922922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 141 - 222
Target Start/End: Original strand, 23718006 - 23718087
Alignment:
Q  141 gacactgacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcgga 222  Q
    ||||| |||| |||| | ||||||| ||||||||||||  ||| |||||||||| |||||||||||| ||||||||| ||||    
T  23718006 gacacggacactgacacaccgacaccgctaataatttgagaaagtcacataattcagtgtaattatatgtgtcggtgacgga 23718087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 141 - 222
Target Start/End: Original strand, 24105678 - 24105759
Alignment:
Q  141 gacactgacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcgga 222  Q
    ||||| |||| |||| | ||||||| ||||||||||||  ||| |||||||||| |||||||||||| ||||||||| ||||    
T  24105678 gacacggacactgacacaccgacaccgctaataatttgagaaagtcacataattcagtgtaattatatgtgtcggtgacgga 24105759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 141 - 226
Target Start/End: Original strand, 28596452 - 28596534
Alignment:
Q  141 gacactgacagtgacgcgccgacacagctaataatttgcaaaa-atcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    ||||| |||| |||| ||||||||||||||||    || |||| ||||||||| | |||||||||||||||||||||||||||||||    
T  28596452 gacacggacaatgacacgccgacacagctaat----tgaaaaacatcacataagtcagtgtaattataagtgtcggtgtcggacacg 28596534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 161 - 226
Target Start/End: Complemental strand, 29176552 - 29176487
Alignment:
Q  161 gacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    ||||||| |||||||||| |||  |||||||||| ||||||||||||||||| ||||| |||||||    
T  29176552 gacacagttaataatttgaaaaggtcacataattcagtgtaattataagtgttggtgttggacacg 29176487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 160 - 220
Target Start/End: Original strand, 974746 - 974806
Alignment:
Q  160 cgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    ||||||| ||||||||||| ||| ||||||| ||| |||||||||| ||||||||||||||    
T  974746 cgacacaactaataatttgaaaagatcacattattcagtgtaattacaagtgtcggtgtcg 974806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 141 - 220
Target Start/End: Complemental strand, 23058522 - 23058442
Alignment:
Q  141 gacactgacagtgacgcgccgacacagctaataatttgcaaaaa-tcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    ||||| ||||||||| |||| |||||  |||||||||| ||||| |||||||||  |||||||||| ||||||||||||||    
T  23058522 gacacggacagtgacacgcccacacaattaataatttgaaaaaaatcacataatccagtgtaattacaagtgtcggtgtcg 23058442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 158 - 226
Target Start/End: Complemental strand, 37411306 - 37411238
Alignment:
Q  158 gccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    |||||||| ||||||||||||  |||||||||||||| ||||| |||||| |||||| ||||| |||||    
T  37411306 gccgacaccgctaataatttgagaaaatcacataattcagtgtgattatatgtgtcgatgtcgaacacg 37411238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 159 - 219
Target Start/End: Complemental strand, 42832337 - 42832277
Alignment:
Q  159 ccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtc 219  Q
    ||||||| ||||||||||||  ||||| ||||| || ||||||||||||||||||||||||    
T  42832337 ccgacaccgctaataatttgagaaaattacatatttcagtgtaattataagtgtcggtgtc 42832277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 157 - 212
Target Start/End: Original strand, 21616758 - 21616813
Alignment:
Q  157 cgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgt 212  Q
    ||||||||| ||||||||||||  |||||||||||||| |||||||||||| ||||    
T  21616758 cgccgacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtgt 21616813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 181 - 220
Target Start/End: Complemental strand, 34785021 - 34784982
Alignment:
Q  181 aaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    ||||||||||||||||||||||||||| ||||||||||||    
T  34785021 aaaatcacataatttagtgtaattatatgtgtcggtgtcg 34784982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 161 - 220
Target Start/End: Original strand, 44860320 - 44860379
Alignment:
Q  161 gacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    ||||| ||||||||||||  |||||| ||||||| |||||||||||| ||||||||||||    
T  44860320 gacaccgctaataatttgagaaaatcgcataattcagtgtaattatatgtgtcggtgtcg 44860379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 152 - 218
Target Start/End: Complemental strand, 18420502 - 18420436
Alignment:
Q  152 tgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgt 218  Q
    |||| |||| |||| ||||||||||||  |||||||||||||| | || ||||||||||||||||||    
T  18420502 tgacacgccaacactgctaataatttgagaaaatcacataattcaatgcaattataagtgtcggtgt 18420436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 152 - 206
Target Start/End: Complemental strand, 21782886 - 21782832
Alignment:
Q  152 tgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattat 206  Q
    |||| ||||||||| ||||||||||||  |||||||||||||| |||||||||||    
T  21782886 tgacacgccgacactgctaataatttgagaaaatcacataattcagtgtaattat 21782832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 157 - 219
Target Start/End: Original strand, 26769507 - 26769569
Alignment:
Q  157 cgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtc 219  Q
    |||||||||| ||||||||||| ||| ||||||| || | ||||||||| |||||||||||||    
T  26769507 cgccgacacaactaataatttgaaaatatcacattatctggtgtaattacaagtgtcggtgtc 26769569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 226
Target Start/End: Original strand, 5473336 - 5473393
Alignment:
Q  169 taataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    |||||||||| |||||||||||||||  |||||||  || ||||||||||||||||||    
T  5473336 taataatttgaaaaaatcacataattcggtgtaatattatgtgtcggtgtcggacacg 5473393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 158 - 219
Target Start/End: Original strand, 18276518 - 18276579
Alignment:
Q  158 gccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtc 219  Q
    |||||||| ||||||||||||  |||||||| ||||| |||||||||||  |||||||||||    
T  18276518 gccgacaccgctaataatttgagaaaatcacttaattcagtgtaattatgtgtgtcggtgtc 18276579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 141 - 218
Target Start/End: Original strand, 31808057 - 31808134
Alignment:
Q  141 gacactgacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgt 218  Q
    |||| ||||| |||| | ||||||| |||||||||||   |||||||||||||| |||||||||||| ||||| ||||    
T  31808057 gacattgacactgacacaccgacaccgctaataatttaacaaaatcacataattcagtgtaattatatgtgtcagtgt 31808134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 226
Target Start/End: Complemental strand, 40361805 - 40361748
Alignment:
Q  169 taataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    |||||||||| |||||| |||||||||||||||||||||  ||| |||||| ||||||    
T  40361805 taataatttgaaaaaattacataatttagtgtaattatatctgttggtgtcagacacg 40361748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 225
Target Start/End: Complemental strand, 8300258 - 8300214
Alignment:
Q  181 aaaatcacataatttagtgtaattataagtgtcggtgtcggacac 225  Q
    ||||| ||||||||||||||||| |||||||||||||| ||||||    
T  8300258 aaaatgacataatttagtgtaatcataagtgtcggtgttggacac 8300214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 152 - 220
Target Start/End: Original strand, 33153415 - 33153483
Alignment:
Q  152 tgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    |||| |||||| ||| ||||| ||||  ||||||||||||||| |||||||||| ||||||| ||||||    
T  33153415 tgacacgccgaaacatctaatgatttaaaaaaatcacataattcagtgtaattacaagtgtccgtgtcg 33153483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 141 - 196
Target Start/End: Complemental strand, 34337255 - 34337200
Alignment:
Q  141 gacactgacagtgacgcgccgacacagctaataatttgcaaaaatcacataattta 196  Q
    ||||| |||| |||| ||||||||||| | |||||||| |||||||||||||||||    
T  34337255 gacacggacattgacacgccgacacagttgataatttgaaaaaatcacataattta 34337200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 226
Target Start/End: Original strand, 31284044 - 31284114
Alignment:
Q  157 cgccgacacagctaataatttgcaaaaatcacataatttagtgtaatta-taagtgtcggtgtcggacacg 226  Q
    ||||||||| ||||||||||||  |||||||||||||  | |||||||| || |||||||||| |||||||    
T  31284044 cgccgacactgctaataatttgagaaaatcacataatccattgtaattattatgtgtcggtgttggacacg 31284114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 225
Target Start/End: Original strand, 896202 - 896275
Alignment:
Q  152 tgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacac 225  Q
    |||| ||||||||| ||||||| ||||  ||||||||||| || | |||||| ||| ||||||| |||||||||    
T  896202 tgacacgccgacactgctaatagtttgagaaaatcacatatttcaatgtaatcatatgtgtcggcgtcggacac 896275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 226
Target Start/End: Original strand, 12224212 - 12224288
Alignment:
Q  152 tgacgcgccgacacagctaataatttgcaaaaa--tcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    |||| |||| ||| ||||||||||||| |||||  || ||||||  | |||||||| ||||||||||||||||||||    
T  12224212 tgacacgccaacatagctaataatttgaaaaaaaatcccataatccaatgtaattacaagtgtcggtgtcggacacg 12224288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 214
Target Start/End: Complemental strand, 12940994 - 12940941
Alignment:
Q  161 gacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcg 214  Q
    |||||| ||||||||||| |||||||| |||||| |||||||||| || |||||    
T  12940994 gacacaactaataatttgaaaaaatcatataattcagtgtaattacaaatgtcg 12940941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 206
Target Start/End: Complemental strand, 16069333 - 16069268
Alignment:
Q  141 gacactgacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattat 206  Q
    ||||| |||| |||| ||||||||| | |||||||||  |||||||| |||||| |||||||||||    
T  16069333 gacacggacactgacacgccgacaccgttaataatttaaaaaaatcatataattcagtgtaattat 16069268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 163 - 220
Target Start/End: Original strand, 38442309 - 38442366
Alignment:
Q  163 cacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    |||| ||||| ||||  ||||||||||||||| | | |||||||||||||||||||||    
T  38442309 cacaactaatgatttaaaaaaatcacataattcaatataattataagtgtcggtgtcg 38442366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 218
Target Start/End: Original strand, 39026822 - 39026875
Alignment:
Q  165 cagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgt 218  Q
    |||||||||| |||  ||||||||||| |||| ||||||||||| |||||||||    
T  39026822 cagctaataacttgagaaaatcacatattttaatgtaattataaatgtcggtgt 39026875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 213
Target Start/End: Original strand, 39323263 - 39323316
Alignment:
Q  160 cgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtc 213  Q
    |||||| ||||||||||||  ||||| |||||||| |||||||||| |||||||    
T  39323263 cgacaccgctaataatttgacaaaattacataattcagtgtaattacaagtgtc 39323316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 168 - 220
Target Start/End: Original strand, 18622613 - 18622665
Alignment:
Q  168 ctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    ||||||||||   |||||||||||||| |||||||||||| |||| |||||||    
T  18622613 ctaataatttaataaaatcacataattcagtgtaattatacgtgttggtgtcg 18622665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 219
Target Start/End: Complemental strand, 18889644 - 18889592
Alignment:
Q  167 gctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtc 219  Q
    |||||||| |||  |||||||||||||| |||||||| ||| |||||||||||    
T  18889644 gctaataaattgagaaaatcacataattcagtgtaatcatatgtgtcggtgtc 18889592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 225
Target Start/End: Original strand, 23921261 - 23921317
Alignment:
Q  169 taataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacac 225  Q
    ||||||||||  ||||| |||||||| ||||||||||||| | | ||||||||||||    
T  23921261 taataatttgagaaaattacataattcagtgtaattataaatattggtgtcggacac 23921317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 213
Target Start/End: Complemental strand, 27286355 - 27286299
Alignment:
Q  157 cgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtc 213  Q
    ||||||||  ||||||||||||  || ||||||||||| |||||||||||| |||||    
T  27286355 cgccgacaacgctaataatttgataagatcacataattaagtgtaattataggtgtc 27286299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 56; Significance: 3e-23; HSPs: 75)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 147 - 226
Target Start/End: Original strand, 15680795 - 15680874
Alignment:
Q  147 gacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    |||| |||| |||||||| |||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||    
T  15680795 gacactgacacgccgacatagctaataattaaaaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacg 15680874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 147 - 226
Target Start/End: Original strand, 25481888 - 25481967
Alignment:
Q  147 gacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    |||| |||| |||||||||||||||||||||| ||||||||||||||| |||||||||| |||||| |||||||||||||    
T  25481888 gacaatgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgttggtgtcggacacg 25481967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 141 - 226
Target Start/End: Complemental strand, 11061155 - 11061070
Alignment:
Q  141 gacactgacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    ||||| |||| |||| | |||||||||||||||||||| ||||||||||||||||||| |||||| ||||||||||||| ||||||    
T  11061155 gacacggacactgacacaccgacacagctaataatttgaaaaaatcacataatttagtataattacaagtgtcggtgtcagacacg 11061070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 147 - 220
Target Start/End: Original strand, 24339628 - 24339701
Alignment:
Q  147 gacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    |||| |||| |||||||||||||||||||||| ||||||||||||||| |||||||||| ||||||||||||||    
T  24339628 gacattgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcg 24339701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 167 - 232
Target Start/End: Original strand, 3721099 - 3721164
Alignment:
Q  167 gctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacgcctaat 232  Q
    ||||||||||||  |||||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  3721099 gctaataatttgagaaaatcacataatttagtataattatatgtgtcggtgtcggacacgcctaat 3721164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 123 - 220
Target Start/End: Complemental strand, 9408432 - 9408334
Alignment:
Q  123 gacaccgaacatgacatggacact-gacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    ||||||||| | |||| ||||||  |||| |||| | ||||||||  |||||||||| |||||||||||||||||||||||||| ||||||||||||||    
T  9408432 gacaccgaatacgacacggacaccagacactgacacaccgacacaattaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcg 9408334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 142 - 225
Target Start/End: Complemental strand, 7197375 - 7197292
Alignment:
Q  142 acactgacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacac 225  Q
    |||| |||| |||| |||||||||||||||||||||  ||||||||  ||||| | |||||||| |||||||||||||||||||    
T  7197375 acacagacattgacacgccgacacagctaataatttaaaaaaatcatttaattcaatgtaattacaagtgtcggtgtcggacac 7197292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 161 - 220
Target Start/End: Original strand, 19992001 - 19992060
Alignment:
Q  161 gacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    ||||||||||||||||||  ||||||||||| || |||||||||||||||||||||||||    
T  19992001 gacacagctaataatttgagaaaatcacatatttcagtgtaattataagtgtcggtgtcg 19992060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 159 - 225
Target Start/End: Original strand, 20549789 - 20549855
Alignment:
Q  159 ccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacac 225  Q
    ||||||| ||||||||||||  |||||||| ||||| |||||||||||| |||||||||||||||||    
T  20549789 ccgacaccgctaataatttgagaaaatcacgtaattcagtgtaattatatgtgtcggtgtcggacac 20549855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 160 - 218
Target Start/End: Original strand, 41020495 - 41020553
Alignment:
Q  160 cgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgt 218  Q
    ||||||| |||||||||| ||||||||||||||||||||||||||||| | ||||||||    
T  41020495 cgacacaactaataatttacaaaaatcacataatttagtgtaattatatgcgtcggtgt 41020553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 159 - 220
Target Start/End: Original strand, 3991322 - 3991383
Alignment:
Q  159 ccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    |||||||| ||||||||||| ||||||||||||||| ||| |||||| ||||||||||||||    
T  3991322 ccgacacaactaataatttgaaaaaatcacataattcagtataattacaagtgtcggtgtcg 3991383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 147 - 220
Target Start/End: Complemental strand, 5409909 - 5409836
Alignment:
Q  147 gacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    |||| |||| ||| || ||||||||||||||| ||||||||||||||| |||| ||||| ||||||||||||||    
T  5409909 gacactgacacgctgatacagctaataatttgaaaaaatcacataattcagtgcaattacaagtgtcggtgtcg 5409836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 158 - 219
Target Start/End: Original strand, 7438703 - 7438764
Alignment:
Q  158 gccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtc 219  Q
    |||||||||| |||||||||| ||||||||||||||| | |||||||| |||||||||||||    
T  7438703 gccgacacagttaataatttgaaaaaatcacataattcaatgtaattacaagtgtcggtgtc 7438764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 181 - 226
Target Start/End: Complemental strand, 18213072 - 18213027
Alignment:
Q  181 aaaatcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||    
T  18213072 aaaatcacataatttagtgtaattatatgtgtcggtgtcggacacg 18213027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 141 - 226
Target Start/End: Original strand, 26733284 - 26733369
Alignment:
Q  141 gacactgacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    ||||| |||| |||| || |||||| ||||||||||||  |||||||||||||| ||| |||||| | ||||||||||||||||||    
T  26733284 gacacggacactgacacgtcgacaccgctaataatttgacaaaatcacataattcagtctaattaaatgtgtcggtgtcggacacg 26733369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 123 - 220
Target Start/End: Original strand, 35861926 - 35862023
Alignment:
Q  123 gacaccgaacatgacatggacactgacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    ||||||| ||| ||||  |||||| ||| | || |||||||||| ||||||||||| ||||||||||||||| | ||||||| |||||||| ||||||    
T  35861926 gacaccggacacgacacagacactaacactaacacgccgacacaactaataatttgaaaaaatcacataattcaatgtaattgtaagtgtctgtgtcg 35862023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 161 - 226
Target Start/End: Original strand, 21864806 - 21864873
Alignment:
Q  161 gacacagctaataatttgcaaaaa--tcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    |||||||||||||||||| |||||  ||| ||||||||||||||||| |||||||| |||||||||||    
T  21864806 gacacagctaataatttgaaaaaaaatcatataatttagtgtaattacaagtgtcgctgtcggacacg 21864873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 141 - 221
Target Start/End: Original strand, 24105658 - 24105738
Alignment:
Q  141 gacactgacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcgg 221  Q
    ||||| |||| |||| |||||||||||||||||||||| ||||||  ||| ||| |||||||||| ||||||||| |||||    
T  24105658 gacacggacactgacacgccgacacagctaataatttgaaaaaattgcatgattcagtgtaattacaagtgtcggagtcgg 24105738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 157 - 225
Target Start/End: Original strand, 28155566 - 28155634
Alignment:
Q  157 cgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacac 225  Q
    ||||||||| ||||||||||||  ||||| ||||||||  ||||||||| |||||||||||||||||||    
T  28155566 cgccgacaccgctaataatttgagaaaattacataattcggtgtaattacaagtgtcggtgtcggacac 28155634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 141 - 220
Target Start/End: Original strand, 1433434 - 1433513
Alignment:
Q  141 gacactgacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    ||||| |||| |||| ||||||||| | ||||||||||  |||||||||| |||| ||||||||||| ||||||||||||    
T  1433434 gacacggacattgacacgccgacaccgttaataatttgagaaaatcacatcatttggtgtaattatatgtgtcggtgtcg 1433513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 159 - 226
Target Start/End: Original strand, 8234144 - 8234211
Alignment:
Q  159 ccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    |||||||| ||||||||||| |||||| |||||||| |||||| ||| ||||| ||||||||||||||    
T  8234144 ccgacacaactaataatttgaaaaaataacataattcagtgtagttacaagtgccggtgtcggacacg 8234211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 161 - 220
Target Start/End: Original strand, 9778500 - 9778559
Alignment:
Q  161 gacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    ||||||||| |||||||| ||||||||||||||| ||| |||||| ||||||||||||||    
T  9778500 gacacagctgataatttgaaaaaatcacataattcagtataattacaagtgtcggtgtcg 9778559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 152 - 219
Target Start/End: Complemental strand, 11665508 - 11665441
Alignment:
Q  152 tgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtc 219  Q
    |||| ||| |||||| ||||||||||| ||||||||||||||| ||| ||||||||||||||| ||||    
T  11665508 tgacacgctgacacaactaataatttgaaaaaatcacataattcagtctaattataagtgtcgatgtc 11665441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 157 - 220
Target Start/End: Original strand, 13770687 - 13770750
Alignment:
Q  157 cgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    |||||||||||||||||||||  |||||| |||||||| |||||||||| |||||||| |||||    
T  13770687 cgccgacacagctaataatttaaaaaaattacataattcagtgtaattacaagtgtcgttgtcg 13770750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 157 - 220
Target Start/End: Complemental strand, 18215249 - 18215186
Alignment:
Q  157 cgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    ||||||| |||||||||||||| ||||||||||||||  |||||| ||| ||||||||||||||    
T  18215249 cgccgacgcagctaataatttgaaaaaatcacataatgcagtgtagttacaagtgtcggtgtcg 18215186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 167 - 226
Target Start/End: Original strand, 21880158 - 21880217
Alignment:
Q  167 gctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    ||||||||||||  ||||| |||||||| |||||||||| ||||||||||||||||||||    
T  21880158 gctaataatttgagaaaattacataattcagtgtaattacaagtgtcggtgtcggacacg 21880217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 165 - 216
Target Start/End: Complemental strand, 26033516 - 26033465
Alignment:
Q  165 cagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggt 216  Q
    |||||||||||||| ||||||||||||||| |||||||||| ||||||||||    
T  26033516 cagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggt 26033465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 141 - 220
Target Start/End: Original strand, 27945021 - 27945100
Alignment:
Q  141 gacactgacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    ||||| |||| |||| |||||||||  |||||||||||  ||||| |||||||| |||||||||| ||||||||||||||    
T  27945021 gacacggacactgacacgccgacaccactaataatttgagaaaattacataattcagtgtaattacaagtgtcggtgtcg 27945100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 169 - 232
Target Start/End: Original strand, 38143231 - 38143294
Alignment:
Q  169 taataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacgcctaat 232  Q
    |||||||||| ||||||||||||||||| |||||||||| |||| |||||| ||||| ||||||    
T  38143231 taataatttgaaaaaatcacataatttaatgtaattatatgtgttggtgtcagacacacctaat 38143294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 141 - 220
Target Start/End: Complemental strand, 43027548 - 43027469
Alignment:
Q  141 gacactgacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    ||||| |||| |||| || |||| |||||||||||||| ||||||||||||||  ||||||| || ||||||||||||||    
T  43027548 gacacggacactgacacggcgacccagctaataatttgaaaaaatcacataatgcagtgtaaatacaagtgtcggtgtcg 43027469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 167 - 220
Target Start/End: Complemental strand, 7328744 - 7328691
Alignment:
Q  167 gctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    ||||||||||||  ||||| ||||||||||||||||||||| ||||||||||||    
T  7328744 gctaataatttgagaaaataacataatttagtgtaattatatgtgtcggtgtcg 7328691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 169 - 218
Target Start/End: Original strand, 15902830 - 15902879
Alignment:
Q  169 taataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgt 218  Q
    ||||||||||  ||||||||||||||||||||||||||| ||||||||||    
T  15902830 taataatttgataaaatcacataatttagtgtaattatatgtgtcggtgt 15902879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 161 - 226
Target Start/End: Original strand, 19213803 - 19213868
Alignment:
Q  161 gacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    ||||| |||||||||||  ||||||||||||||  ||||||| || ||||||||||||||||||||    
T  19213803 gacactgctaataattttaaaaaatcacataatgcagtgtaaatacaagtgtcggtgtcggacacg 19213868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 147 - 220
Target Start/End: Original strand, 32308106 - 32308179
Alignment:
Q  147 gacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    |||| |||| ||||||||| ||||||||||||  |||||||||||||| ||||||||| || ||||| ||||||    
T  32308106 gacactgacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattgtatgtgtcagtgtcg 32308179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 180 - 220
Target Start/End: Original strand, 2334269 - 2334309
Alignment:
Q  180 aaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    |||||||||||||||||||||||||| ||||||||||||||    
T  2334269 aaaaatcacataatttagtgtaattacaagtgtcggtgtcg 2334309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 161 - 225
Target Start/End: Complemental strand, 42720949 - 42720885
Alignment:
Q  161 gacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacac 225  Q
    ||||| |||||||||||| ||||||||||||||| | |||||||||| ||||| ||||| |||||    
T  42720949 gacaccgctaataatttgaaaaaatcacataattaaatgtaattatatgtgtcagtgtctgacac 42720885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 167 - 226
Target Start/End: Original strand, 1401031 - 1401090
Alignment:
Q  167 gctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    ||||||||||||  ||| |||||||||| ||||||||||||||| |||||||| ||||||    
T  1401031 gctaataatttgagaaactcacataattcagtgtaattataagtatcggtgtccgacacg 1401090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 157 - 220
Target Start/End: Original strand, 10042933 - 10042996
Alignment:
Q  157 cgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    |||||||||  |||||||||||  ||| ||||||||||||| ||||||||||||||| ||||||    
T  10042933 cgccgacaccactaataatttgataaattcacataatttagcgtaattataagtgtcagtgtcg 10042996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 159 - 218
Target Start/End: Complemental strand, 27093474 - 27093415
Alignment:
Q  159 ccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgt 218  Q
    ||||||| |||||||||||   ||||||||||||||||||||||||||| | ||||||||    
T  27093474 ccgacaccgctaataatttaagaaaatcacataatttagtgtaattatatgcgtcggtgt 27093415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 159 - 218
Target Start/End: Original strand, 27184827 - 27184886
Alignment:
Q  159 ccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgt 218  Q
    ||||||| |||||||||||   ||||||||||||||||||||||||||| | ||||||||    
T  27184827 ccgacaccgctaataatttaagaaaatcacataatttagtgtaattatatgcgtcggtgt 27184886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 181 - 220
Target Start/End: Complemental strand, 27229350 - 27229311
Alignment:
Q  181 aaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    |||||||||||||||||||||||||||||| |||||||||    
T  27229350 aaaatcacataatttagtgtaattataagtatcggtgtcg 27229311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 112 - 214
Target Start/End: Original strand, 43249950 - 43250046
Alignment:
Q  112 tatgaagcactgacaccgaacatgacatggacactgacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtg 211  Q
    |||||||||| ||||||| ||| |||| |||||||||||      ||||||||| | ||||||||||  ||||| |||||||  ||||||||||||||||    
T  43249950 tatgaagcacggacaccggacaagacacggacactgaca------cgccgacacggataataatttgagaaaatgacataatacagtgtaattataagtg 43250043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 157 - 220
Target Start/End: Complemental strand, 11272651 - 11272586
Alignment:
Q  157 cgccgacacagctaataatttgcaaaaatcacata--atttagtgtaattataagtgtcggtgtcg 220  Q
    |||||||||| || |||||||| ||||||||||||  ||| |||||||||| ||||||||||||||    
T  11272651 cgccgacacaactgataatttgaaaaaatcacatataattcagtgtaattacaagtgtcggtgtcg 11272586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 160 - 210
Target Start/End: Original strand, 11831431 - 11831481
Alignment:
Q  160 cgacacagctaataatttgcaaaaatcacataatttagtgtaattataagt 210  Q
    ||||||| ||||||||||| |||||||| ||||||||||||||||| ||||    
T  11831431 cgacacaactaataatttgaaaaaatcatataatttagtgtaattacaagt 11831481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 157 - 219
Target Start/End: Original strand, 19206046 - 19206108
Alignment:
Q  157 cgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtc 219  Q
    ||||||||| ||||||||||||  |||||||||||||| | | |||||||| |||||||||||    
T  19206046 cgccgacaccgctaataatttgagaaaatcacataattcattataattatatgtgtcggtgtc 19206108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 147 - 220
Target Start/End: Original strand, 21560484 - 21560562
Alignment:
Q  147 gacagtgacgcgccgacacagctaataatttgca-----aaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    |||| |||| |||||| ||||||||||||||| |     |||||||||||||| |||||||||| ||||||||||||||    
T  21560484 gacactgacacgccgatacagctaataatttgaagaaaaaaaatcacataattcagtgtaattacaagtgtcggtgtcg 21560562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 152 - 217
Target Start/End: Original strand, 2948674 - 2948739
Alignment:
Q  152 tgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtg 217  Q
    |||| ||||||||| ||| |||||||   |||||||| |||||||||||||||||| |||||||||    
T  2948674 tgacacgccgacaccgctgataattttagaaaatcacgtaatttagtgtaattatatgtgtcggtg 2948739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 157 - 226
Target Start/End: Original strand, 21826269 - 21826338
Alignment:
Q  157 cgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    |||||||||  ||||||||||  ||||||||||||| | ||| |||| ||| ||||||||||||||||||    
T  21826269 cgccgacacgactaataatttaaaaaaatcacataactcagtctaataatatgtgtcggtgtcggacacg 21826338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 157 - 206
Target Start/End: Complemental strand, 29787432 - 29787383
Alignment:
Q  157 cgccgacacagctaataatttgcaaaaatcacataatttagtgtaattat 206  Q
    ||||||||| ||||||||||||  |||||||||||||| |||||||||||    
T  29787432 cgccgacaccgctaataatttgagaaaatcacataattcagtgtaattat 29787383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 181 - 226
Target Start/End: Original strand, 39138464 - 39138509
Alignment:
Q  181 aaaatcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    |||||||||||||| ||||||||||||  |||||||||||||||||    
T  39138464 aaaatcacataattcagtgtaattatatatgtcggtgtcggacacg 39138509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 223
Target Start/End: Original strand, 9482944 - 9482996
Alignment:
Q  171 ataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggac 223  Q
    ||||||||  ||||||||| |||| |||||||||||| |||||||||||||||    
T  9482944 ataatttgagaaaatcacacaattcagtgtaattatatgtgtcggtgtcggac 9482996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 220
Target Start/End: Original strand, 18039018 - 18039058
Alignment:
Q  180 aaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    ||||||||||||||| |||||||||| ||||||||||||||    
T  18039018 aaaaatcacataattcagtgtaattacaagtgtcggtgtcg 18039058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 152 - 220
Target Start/End: Complemental strand, 22602778 - 22602710
Alignment:
Q  152 tgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    |||| ||||||||| |  ||| |||||  |||||||||||||| |||||||||||| ||||||||||||    
T  22602778 tgacacgccgacaccgtaaattatttgagaaaatcacataattcagtgtaattatatgtgtcggtgtcg 22602710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 160 - 224
Target Start/End: Complemental strand, 32287523 - 32287459
Alignment:
Q  160 cgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggaca 224  Q
    |||||| ||||||||| ||  |||||||||||||| |||| || |||| ||||||||||||||||    
T  32287523 cgacaccgctaataatctgagaaaatcacataattcagtgcaagtatatgtgtcggtgtcggaca 32287459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 157 - 224
Target Start/End: Original strand, 5835243 - 5835310
Alignment:
Q  157 cgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggaca 224  Q
    |||||||||  |||||| ||||  ||||| |||||||| |||||||||||| ||||||||||| ||||    
T  5835243 cgccgacaccactaatagtttgagaaaataacataattcagtgtaattatatgtgtcggtgtcagaca 5835310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 169 - 220
Target Start/End: Complemental strand, 11890970 - 11890919
Alignment:
Q  169 taataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    |||||||||| |||||||| |||||| ||||||||||| ||||| |||||||    
T  11890970 taataatttgaaaaaatcatataattcagtgtaattatgagtgtaggtgtcg 11890919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 169 - 220
Target Start/End: Original strand, 16341504 - 16341555
Alignment:
Q  169 taataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    ||||||||||  |||||||||||||| |||||||||||| ||| ||||||||    
T  16341504 taataatttgagaaaatcacataattaagtgtaattatatgtgccggtgtcg 16341555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 141 - 224
Target Start/End: Original strand, 22484005 - 22484088
Alignment:
Q  141 gacactgacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggaca 224  Q
    ||||| |||| |||| ||||||||| |||||||||||   |||||  ||||||| ||| |||||||| ||||||||||| ||||    
T  22484005 gacacagacactgacacgccgacaccgctaataattttagaaaattgcataattcagtataattatatgtgtcggtgtcagaca 22484088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 142 - 213
Target Start/End: Original strand, 22868023 - 22868094
Alignment:
Q  142 acactgacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtc 213  Q
    |||| |||| |||| |||||||||  |||||||| ||  |||||||||||||| |||||||||||| |||||    
T  22868023 acaccgacactgacacgccgacaccactaataatatgagaaaatcacataattcagtgtaattatatgtgtc 22868094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 157 - 220
Target Start/End: Original strand, 25822651 - 25822714
Alignment:
Q  157 cgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    |||||||||| ||||||||||| |||||   || |||| |||||||||| ||||||||||||||    
T  25822651 cgccgacacaactaataatttgaaaaaaaatcacaattcagtgtaattacaagtgtcggtgtcg 25822714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 162 - 220
Target Start/End: Complemental strand, 32094079 - 32094020
Alignment:
Q  162 acacagctaataatttgcaaaaa-tcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    ||||| ||||||||||| ||||| |||||||||| |||||||||| || |||||||||||    
T  32094079 acacaactaataatttgaaaaaaatcacataattcagtgtaattacaaatgtcggtgtcg 32094020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 226
Target Start/End: Original strand, 598207 - 598273
Alignment:
Q  160 cgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    |||||| |||||||||||   |||||||| ||||| | ||||||| |||||||||||||| ||||||    
T  598207 cgacaccgctaataatttaagaaaatcacgtaattaaatgtaattgtaagtgtcggtgtcagacacg 598273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 220
Target Start/End: Original strand, 5548673 - 5548735
Alignment:
Q  158 gccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    |||||||| ||| ||||||||  ||||||| |||||| |||||||||||| ||||| ||||||    
T  5548673 gccgacaccgctgataatttgagaaaatcaaataattcagtgtaattatatgtgtcagtgtcg 5548735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 227
Target Start/End: Original strand, 23191892 - 23191962
Alignment:
Q  157 cgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacgc 227  Q
    ||||||||| ||||||||||||  ||||||||||| || |||||||||| | || || ||||| |||||||    
T  23191892 cgccgacaccgctaataatttgagaaaatcacatatttcagtgtaattacatgtttcagtgtcagacacgc 23191962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 226
Target Start/End: Original strand, 33994203 - 33994277
Alignment:
Q  152 tgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    |||| ||||||| || ||| ||||||| |||  |||||||||| |||| ||||| ||||||||||||| ||||||    
T  33994203 tgacacgccgacgcaactactaatttgaaaaggtcacataattcagtgcaattacaagtgtcggtgtcagacacg 33994277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 219
Target Start/End: Original strand, 640134 - 640171
Alignment:
Q  182 aaatcacataatttagtgtaattataagtgtcggtgtc 219  Q
    ||||||||||||| |||||||||||| |||||||||||    
T  640134 aaatcacataattcagtgtaattatatgtgtcggtgtc 640171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 226
Target Start/End: Complemental strand, 3554545 - 3554500
Alignment:
Q  181 aaaatcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    ||||| |||||||||| ||||||||||  |||||||||||||||||    
T  3554545 aaaattacataatttaatgtaattatagatgtcggtgtcggacacg 3554500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 159 - 220
Target Start/End: Original strand, 4024025 - 4024086
Alignment:
Q  159 ccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    |||||||| ||||||||||  |||||| |||||||||| | ||||||||||| |||| ||||    
T  4024025 ccgacacaactaataatttaaaaaaatgacataatttaatataattataagtatcggcgtcg 4024086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 218
Target Start/End: Original strand, 5233637 - 5233686
Alignment:
Q  169 taataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgt 218  Q
    ||||||||||  ||||||||||||| ||||||||||||| |||| |||||    
T  5233637 taataatttgagaaaatcacataatctagtgtaattatatgtgttggtgt 5233686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 220
Target Start/End: Complemental strand, 6630985 - 6630912
Alignment:
Q  147 gacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    |||| |||| |||||||||  |||||||||||  ||| |||| ||||| |||||||||||| |||||| |||||    
T  6630985 gacactgacacgccgacaccactaataatttgagaaagtcacttaattcagtgtaattatatgtgtcgatgtcg 6630912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 148 - 220
Target Start/End: Original strand, 30731024 - 30731094
Alignment:
Q  148 acagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    |||||| | ||||||||| || |||||||||  |||||||||||||| ||||||||| |  ||||||||||||    
T  30731024 acagtggcacgccgacaccgcgaataatttgagaaaatcacataattcagtgtaattgt--gtgtcggtgtcg 30731094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 225
Target Start/End: Original strand, 37870900 - 37870957
Alignment:
Q  168 ctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacac 225  Q
    ||||| |||||  |||||||||| |||| ||||||||||  |||||||||||||||||    
T  37870900 ctaatcatttgagaaaatcacatgatttcgtgtaattatgtgtgtcggtgtcggacac 37870957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 159 - 220
Target Start/End: Original strand, 49107819 - 49107879
Alignment:
Q  159 ccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    ||||||| ||||||||||||  |||| ||||||||| ||||| |||||| ||||||||||||    
T  49107819 ccgacaccgctaataatttgagaaaa-cacataattgagtgtgattatatgtgtcggtgtcg 49107879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 168 - 220
Target Start/End: Original strand, 7058433 - 7058485
Alignment:
Q  168 ctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    ||||||||||| ||||||||  ||||| |||||||||| |||||| |||||||    
T  7058433 ctaataatttgaaaaaatcatgtaattcagtgtaattacaagtgttggtgtcg 7058485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 168 - 220
Target Start/End: Complemental strand, 18013126 - 18013074
Alignment:
Q  168 ctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    ||||||||||  |||||| |||||||| |||||||||||| ||||| ||||||    
T  18013126 ctaataatttaaaaaaattacataattcagtgtaattatatgtgtcagtgtcg 18013074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 141 - 220
Target Start/End: Original strand, 20152 - 20231
Alignment:
Q  141 gacactgacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    ||||| |||| |||| |||||||||||||||||||||| ||||||||||||||| |||||||||| ||||||| ||||||    
T  20152 gacacggacaatgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcagtgtcg 20231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 141 - 232
Target Start/End: Original strand, 46662 - 46752
Alignment:
Q  141 gacactgacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacgcctaat 232  Q
    ||||| |||| |||| ||||||||||| |||||||||| ||||||||||||||| |||||||||| || |||||||||| ||||||||||||    
T  46662 gacacggacaatgacacgccgacacagttaataatttgaaaaaatcacataattcagtgtaattacaaatgtcggtgtc-gacacgcctaat 46752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 160 - 226
Target Start/End: Original strand, 70277 - 70343
Alignment:
Q  160 cgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    |||||||| |||||||||| |||||| |||||||| |||||||||||||||||||||||||||||||    
T  70277 cgacacagttaataatttgaaaaaataacataattcagtgtaattataagtgtcggtgtcggacacg 70343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 157 - 226
Target Start/End: Complemental strand, 525 - 456
Alignment:
Q  157 cgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    ||||||||| |||||||||||| |||||||||| |||| |||||||||| ||||||||||||||||||||    
T  525 cgccgacactgctaataatttgaaaaaatcacaaaattcagtgtaattacaagtgtcggtgtcggacacg 456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 140 - 212
Target Start/End: Original strand, 51790 - 51862
Alignment:
Q  140 ggacactgacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgt 212  Q
    |||||| |||| |||| |||||||||||||||||||||| ||||||||||||||| |||||||||| ||||||    
T  51790 ggacacggacactgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgt 51862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 157 - 212
Target Start/End: Complemental strand, 7374 - 7319
Alignment:
Q  157 cgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgt 212  Q
    |||||||||| ||||||||||| |||||||||||||||||||||||||||||||||    
T  7374 cgccgacacaactaataatttggaaaaatcacataatttagtgtaattataagtgt 7319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 17808 - 17750
Alignment:
Q  161 gacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtc 219  Q
    |||||| ||||||||||| |||||||||||||||||||||||||| |||||||||||||    
T  17808 gacacaactaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtc 17750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0722 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0722
Description:

Target: scaffold0722; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 160 - 225
Target Start/End: Complemental strand, 7092 - 7027
Alignment:
Q  160 cgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacac 225  Q
    ||||||||||||||||||| |||||| |||||||||||| |||||| |||||| ||||||||||||    
T  7092 cgacacagctaataatttgaaaaaattacataatttagtataattacaagtgtaggtgtcggacac 7027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 141 - 220
Target Start/End: Original strand, 23400 - 23479
Alignment:
Q  141 gacactgacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    ||||| |||| |||| ||||||||||| |||||| |   ||||||||||||||| |||||||||||||||||||||||||    
T  23400 gacacagacactgacacgccgacacagataataactcaaaaaaatcacataattcagtgtaattataagtgtcggtgtcg 23479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 220
Target Start/End: Original strand, 23530 - 23570
Alignment:
Q  180 aaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    ||||||||||||||| |||||||||||||||||| ||||||    
T  23530 aaaaatcacataattcagtgtaattataagtgtcagtgtcg 23570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0697 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0697
Description:

Target: scaffold0697; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 157 - 226
Target Start/End: Original strand, 1640 - 1709
Alignment:
Q  157 cgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    ||||||||| | ||||||||||  ||||||| ||||||| || |||||||||||||||||||||||||||    
T  1640 cgccgacaccgttaataatttgagaaaatcatataatttggtataattataagtgtcggtgtcggacacg 1709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 157 - 226
Target Start/End: Original strand, 8006 - 8074
Alignment:
Q  157 cgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    |||||||||| ||||||||||| |||||||| |||||  |||||||||| ||||||||||||||||||||    
T  8006 cgccgacacaactaataatttgaaaaaatcatataatacagtgtaatta-aagtgtcggtgtcggacacg 8074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 220
Target Start/End: Original strand, 8634 - 8725
Alignment:
Q  123 gacaccgaacatgacatggacactgacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    ||||||| ||| ||||||||||||||||      || ||||||  ||||||||||   ||||||||||| || ||| |||||||||||||||||||||    
T  8634 gacaccggacacgacatggacactgaca------cgtcgacacttctaataatttaggaaaatcacatagttcagtataattataagtgtcggtgtcg 8725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 141 - 221
Target Start/End: Original strand, 13380 - 13460
Alignment:
Q  141 gacactgacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcgg 221  Q
    ||||| |||| |||| |||||||||| |||||||||||  |||||||||||||| |||| ||||| ||| |||||||||||    
T  13380 gacacggacactgacacgccgacacaactaataatttgagaaaatcacataattcagtgcaattacaagggtcggtgtcgg 13460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 141 - 221
Target Start/End: Complemental strand, 21947 - 21867
Alignment:
Q  141 gacactgacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcgg 221  Q
    ||||| |||| |||| |||||||||| |||||||||||  |||||||||||||| |||| ||||| ||| |||||||||||    
T  21947 gacacggacactgacacgccgacacaactaataatttgagaaaatcacataattcagtgcaattacaagggtcggtgtcgg 21867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 141 - 217
Target Start/End: Original strand, 130462 - 130538
Alignment:
Q  141 gacactgacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtg 217  Q
    ||||| |||| ||||  |||||||||| ||||| |||| ||||||||||||||| |||||||||| |||||||||||    
T  130462 gacacggacaatgacaagccgacacagttaatagtttgaaaaaatcacataattcagtgtaattacaagtgtcggtg 130538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 157 - 226
Target Start/End: Original strand, 14526 - 14592
Alignment:
Q  157 cgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    |||||||||| ||||||||||| ||||||||||||||| |||||||||| ||||   |||||||||||||    
T  14526 cgccgacacaactaataatttgaaaaaatcacataattcagtgtaattacaagt---ggtgtcggacacg 14592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 141 - 212
Target Start/End: Original strand, 19556 - 19626
Alignment:
Q  141 gacactgacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgt 212  Q
    |||||||||| |||| |||||| ||| ||||||||||| ||||||||||||||| |||||||||| ||||||    
T  19556 gacactgacactgacacgccgatacaactaataatttg-aaaaatcacataattcagtgtaattacaagtgt 19626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 181 - 220
Target Start/End: Complemental strand, 25807 - 25768
Alignment:
Q  181 aaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  25807 aaaatcacataatttagtgtaattataagtgtcggtgtcg 25768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 141 - 219
Target Start/End: Complemental strand, 178898 - 178819
Alignment:
Q  141 gacactgacagtgacgcgccgacacagctaataatttgcaaaaatca-cataatttagtgtaattataagtgtcggtgtc 219  Q
    ||||| |||| |||| |||||||||| ||||||||||| |||||||| ||||||| |||||||||| ||||||| |||||    
T  178898 gacacggacactgacacgccgacacaactaataatttgaaaaaatcatcataattcagtgtaattacaagtgtcagtgtc 178819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 159 - 205
Target Start/End: Original strand, 24023 - 24069
Alignment:
Q  159 ccgacacagctaataatttgcaaaaatcacataatttagtgtaatta 205  Q
    ||||||||||||||||||| |||||||| ||||||||||||||||||    
T  24023 ccgacacagctaataattttcaaaaatctcataatttagtgtaatta 24069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 152 - 217
Target Start/End: Original strand, 53171 - 53236
Alignment:
Q  152 tgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtg 217  Q
    |||| |||||| || || |||||||||  |||||||||||||| ||||||||||||||||||||||    
T  53171 tgacacgccgataccgccaataatttgagaaaatcacataattcagtgtaattataagtgtcggtg 53236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 159 - 220
Target Start/End: Complemental strand, 135373 - 135312
Alignment:
Q  159 ccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    ||||||| ||||||||||||  ||||||||||||||  ||||||||||| ||||||||||||    
T  135373 ccgacactgctaataatttgagaaaatcacataattctgtgtaattatatgtgtcggtgtcg 135312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 157 - 205
Target Start/End: Complemental strand, 33426 - 33378
Alignment:
Q  157 cgccgacacagctaataatttgcaaaaatcacataatttagtgtaatta 205  Q
    |||||||||||||||||||||| |||||| |||||||| ||||||||||    
T  33426 cgccgacacagctaataatttgaaaaaataacataattcagtgtaatta 33378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 158 - 220
Target Start/End: Complemental strand, 3911 - 3849
Alignment:
Q  158 gccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    |||||||| | |||||||||  ||||||||||||||| |||||||||| ||||||| ||||||    
T  3911 gccgacacggttaataatttaaaaaaatcacataattcagtgtaattacaagtgtcagtgtcg 3849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 220
Target Start/End: Original strand, 23771 - 23829
Alignment:
Q  163 cacagctaataatttgcaaaa-atcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    ||||| |||||||||| |||| ||||||||||| |||||||||| ||||||||||||||    
T  23771 cacagttaataatttgaaaaaaatcacataattcagtgtaattacaagtgtcggtgtcg 23829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 220
Target Start/End: Complemental strand, 263430 - 263372
Alignment:
Q  162 acacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    |||| ||||||||||||  |||| ||||||||| |||||||||||||||||| ||||||    
T  263430 acactgctaataatttgagaaaaccacataattcagtgtaattataagtgtcagtgtcg 263372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 147 - 213
Target Start/End: Original strand, 92793 - 92859
Alignment:
Q  147 gacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtc 213  Q
    |||| |||| ||||||||| ||||||||||||  ||||| |||||||| |||||||||| |||||||    
T  92793 gacactgacacgccgacaccgctaataatttgagaaaattacataattcagtgtaattacaagtgtc 92859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 152 - 219
Target Start/End: Original strand, 123616 - 123686
Alignment:
Q  152 tgacgcgccgacacagctaataatttgcaaaaa---tcacataatttagtgtaattataagtgtcggtgtc 219  Q
    |||| |||| ||||||||||||||||  |||||   |||||||||| |||||||||| |||||||||||||    
T  123616 tgacacgccaacacagctaataatttaaaaaaagaatcacataattcagtgtaattacaagtgtcggtgtc 123686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0793 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 159 - 219
Target Start/End: Complemental strand, 4945 - 4884
Alignment:
Q  159 ccgacacagctaataatttgcaaaaa-tcacataatttagtgtaattataagtgtcggtgtc 219  Q
    |||||||||||||||||||  ||||| |||||||||| |||||||||| |||||| ||||||    
T  4945 ccgacacagctaataatttaaaaaaaatcacataattcagtgtaattacaagtgttggtgtc 4884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 141 - 214
Target Start/End: Complemental strand, 225347 - 225274
Alignment:
Q  141 gacactgacagtgacgcgccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcg 214  Q
    ||||| |||| |||| ||||||||||| ||||||||||  ||||| |||||||  | |||||||||||||||||    
T  225347 gacacggacactgacacgccgacacagataataatttgagaaaatgacataatacaatgtaattataagtgtcg 225274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 168 - 220
Target Start/End: Complemental strand, 9799 - 9747
Alignment:
Q  168 ctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    |||||||||||  |||||||| ||||| |||||||||||| ||||||||||||    
T  9799 ctaataatttgagaaaatcacttaattcagtgtaattatatgtgtcggtgtcg 9747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 147 - 220
Target Start/End: Original strand, 71709 - 71784
Alignment:
Q  147 gacagtgacgcgccgacacagctaataatttg--caaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    |||| |||| ||||||||||||||||||||||   |||||||||| |||| ||||||||||  |||||| ||||||    
T  71709 gacactgacacgccgacacagctaataatttgaaaaaaaatcacacaattcagtgtaattactagtgtcagtgtcg 71784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1528 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold1528
Description:

Target: scaffold1528; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 159 - 218
Target Start/End: Original strand, 1033 - 1092
Alignment:
Q  159 ccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgt 218  Q
    ||||||| |||||||||||| |||||| |||||||| ||||||| |||| ||||| ||||    
T  1033 ccgacaccgctaataatttgaaaaaattacataattcagtgtaactatatgtgtcagtgt 1092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 161 - 216
Target Start/End: Complemental strand, 44584 - 44529
Alignment:
Q  161 gacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggt 216  Q
    ||||| ||||| ||||||  |||||||||||||| |||||||||||| ||||||||    
T  44584 gacaccgctaaaaatttgagaaaatcacataattcagtgtaattatatgtgtcggt 44529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 187 - 226
Target Start/End: Complemental strand, 45563 - 45524
Alignment:
Q  187 acataatttagtgtaattataagtgtcggtgtcggacacg 226  Q
    |||||||| |||||||||| ||||||||||||||||||||    
T  45563 acataattcagtgtaattacaagtgtcggtgtcggacacg 45524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 162 - 225
Target Start/End: Original strand, 63774 - 63837
Alignment:
Q  162 acacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcggacac 225  Q
    |||| ||||||||||||  ||||| |||||||| |||| ||||| ||||||||||||| |||||    
T  63774 acaccgctaataatttgagaaaattacataattcagtgcaattacaagtgtcggtgtcagacac 63837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0450 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 220
Target Start/End: Complemental strand, 8697 - 8635
Alignment:
Q  158 gccgacacagctaataatttgcaaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    ||||||||| ||||||||||| ||| |||||||||||  || |||||| || |||||||||||    
T  8697 gccgacacaactaataatttgaaaatatcacataattcggtataattacaaatgtcggtgtcg 8635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 220
Target Start/End: Original strand, 2947 - 2987
Alignment:
Q  180 aaaaatcacataatttagtgtaattataagtgtcggtgtcg 220  Q
    |||||||||||||||||||||||||| |||| || ||||||    
T  2947 aaaaatcacataatttagtgtaattacaagtatcagtgtcg 2987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University