View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1126_high_145 (Length: 252)
Name: NF1126_high_145
Description: NF1126
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1126_high_145 |
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Alignment Details
Target: chr8 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 9569396 - 9569634
Alignment:
| Q |
1 |
ctaccgtttcagcatcattccgcagttttagatgatccattttcatggatgaaccattttcaacaaaatctagcataaagatgaagaaaaagtcaaaatt |
100 |
Q |
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| T |
9569396 |
ctaccgtttcagcatcattccgcagtattagatgatccattttcatggatgaaccattttcaacaaaatctagcataaagatgaagaaaaagtcaaaatt |
9569495 |
T |
|
| Q |
101 |
gcaagaaagaaaagttcacctgaaaatctttggaaacaatatcatcatggaaagcaacaaggttttggcacttgaagcagcagtatgcccgtgatcccat |
200 |
Q |
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| T |
9569496 |
gcaagaaagaaaagttcacctgaaaatctttggaaacaatatcatcatggaaagcaacaaggttttggcacttgaagcagcagtatgcccgtgatcccat |
9569595 |
T |
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| Q |
201 |
caaatcggccattaatgaatttccctaacactgccacct |
239 |
Q |
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| T |
9569596 |
caaatcggccattaatgaatttccctaacactgccacct |
9569634 |
T |
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