View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1126_high_151 (Length: 251)
Name: NF1126_high_151
Description: NF1126
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1126_high_151 |
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Alignment Details
Target: chr4 (Bit Score: 228; Significance: 1e-126; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 1 - 244
Target Start/End: Original strand, 34649955 - 34650198
Alignment:
| Q |
1 |
ttgtttccaataataaatcaactggagtccaaattgtctcagagtccaaattggctcaacccatcattacaattacaaggacaaatattgattcttatcc |
100 |
Q |
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| T |
34649955 |
ttgtttccaataataaatcaactggagtccaaattgtctcagagtccaaattggctcaacccatcattacaattacaaggacaaatattgattcttatcc |
34650054 |
T |
|
| Q |
101 |
ttgaattctaaagcatgtttcacatttatgattattatttttctaacttgcaacaataaaatgtttgtcatttatggttacttttgcgaggagaatttga |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||| |
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| T |
34650055 |
ttgaattctaaagcatgtttcacatttatgattattatttttctaacttgcaacaataaaatgtttgtcaattatggtttcttttgcgaggagaatttga |
34650154 |
T |
|
| Q |
201 |
aaaagaatgaactctccgttaattggcaattcgtgcctatgcta |
244 |
Q |
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|||||||||||||||||||||||||||||||| || |||||||| |
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| T |
34650155 |
aaaagaatgaactctccgttaattggcaattcatgtctatgcta |
34650198 |
T |
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