View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1126_high_98 (Length: 316)
Name: NF1126_high_98
Description: NF1126
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1126_high_98 |
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Alignment Details
Target: chr6 (Bit Score: 156; Significance: 7e-83; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 156; E-Value: 7e-83
Query Start/End: Original strand, 62 - 237
Target Start/End: Complemental strand, 2830325 - 2830151
Alignment:
| Q |
62 |
agagtaggtagataaacatagcttgacttgacctacatttttgcagttcgtctgtgctatggttaaggatcacatgtggctgatgttagtgtgttaaagg |
161 |
Q |
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| T |
2830325 |
agagtaggtagagaaacatagcttgacttgacctacatttttgcagttagtctgtgctatggttaaggatcacatgtggctgatgttagtgcg-taaagg |
2830227 |
T |
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| Q |
162 |
atgtagctattccattatttatggtatattattcacacaaaacaaaaattgtgtttgtgtttacgtgtttttattt |
237 |
Q |
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| T |
2830226 |
atgtagctattccattatttatggtatattattcacacaaaacaaaaattgtgtttgtgtttacgtgtttttattt |
2830151 |
T |
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