View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1126_low_133 (Length: 307)

Name: NF1126_low_133
Description: NF1126
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1126_low_133
NF1126_low_133
[»] chr2 (33 HSPs)
chr2 (99-275)||(2665790-2665966)
chr2 (174-257)||(44860319-44860404)
chr2 (178-242)||(34784961-34785027)
chr2 (206-256)||(21616762-21616812)
chr2 (207-253)||(36281688-36281734)
chr2 (174-255)||(2331795-2331876)
chr2 (206-255)||(30527604-30527653)
chr2 (206-242)||(20922937-20922973)
chr2 (174-235)||(28524447-28524510)
chr2 (174-255)||(22084805-22084890)
chr2 (206-256)||(23718026-23718076)
chr2 (206-256)||(24105698-24105748)
chr2 (206-256)||(31808077-31808127)
chr2 (206-256)||(37411253-37411303)
chr2 (173-257)||(4207856-4207941)
chr2 (202-255)||(28412351-28412404)
chr2 (207-256)||(28677909-28677958)
chr2 (210-255)||(31018591-31018636)
chr2 (206-255)||(35449514-35449563)
chr2 (206-255)||(39279676-39279725)
chr2 (206-242)||(20242736-20242772)
chr2 (205-256)||(19573978-19574029)
chr2 (210-253)||(23921256-23921299)
chr2 (174-238)||(35056886-35056952)
chr2 (201-256)||(36409631-36409686)
chr2 (206-248)||(5367200-5367242)
chr2 (206-256)||(16069263-16069313)
chr2 (206-256)||(18276521-18276571)
chr2 (209-251)||(35191591-35191633)
chr2 (211-248)||(21782832-21782869)
chr2 (212-256)||(30404865-30404909)
chr2 (174-243)||(38355862-38355933)
chr2 (209-249)||(40361766-40361806)
[»] scaffold0123 (1 HSPs)
scaffold0123 (174-257)||(44500-44585)
[»] chr8 (39 HSPs)
chr8 (186-257)||(11803258-11803331)
chr8 (206-256)||(39954288-39954338)
chr8 (206-256)||(4786347-4786397)
chr8 (206-248)||(14731720-14731762)
chr8 (206-256)||(34897085-34897135)
chr8 (206-250)||(33405393-33405437)
chr8 (206-256)||(11927095-11927145)
chr8 (206-248)||(13844605-13844647)
chr8 (177-248)||(15816107-15816180)
chr8 (206-256)||(24362211-24362261)
chr8 (174-248)||(2572031-2572107)
chr8 (207-256)||(4611534-4611583)
chr8 (208-253)||(13018284-13018329)
chr8 (206-255)||(20785474-20785523)
chr8 (179-248)||(29776044-29776113)
chr8 (206-258)||(12570517-12570569)
chr8 (210-250)||(31580140-31580180)
chr8 (209-248)||(14134707-14134746)
chr8 (210-248)||(3025559-3025597)
chr8 (206-268)||(7472524-7472586)
chr8 (206-256)||(11944665-11944715)
chr8 (209-251)||(24447034-24447076)
chr8 (206-248)||(27213555-27213597)
chr8 (206-248)||(31236586-31236628)
chr8 (206-248)||(34222955-34222997)
chr8 (209-258)||(12570746-12570795)
chr8 (212-257)||(24669432-24669477)
chr8 (209-246)||(26529751-26529788)
chr8 (206-239)||(26902184-26902217)
chr8 (206-255)||(33382028-33382077)
chr8 (201-254)||(37283814-37283867)
chr8 (212-256)||(4298901-4298945)
chr8 (212-248)||(8342980-8343016)
chr8 (212-248)||(8343324-8343360)
chr8 (217-257)||(18067954-18067994)
chr8 (206-242)||(18964191-18964227)
chr8 (210-274)||(20679408-20679471)
chr8 (212-248)||(20873077-20873113)
chr8 (197-246)||(22493504-22493555)
[»] chr3 (39 HSPs)
chr3 (206-256)||(32804549-32804599)
chr3 (206-253)||(49505163-49505210)
chr3 (206-248)||(11313809-11313851)
chr3 (206-256)||(16192759-16192809)
chr3 (174-256)||(25064909-25064991)
chr3 (174-256)||(55212963-55213046)
chr3 (175-247)||(15812799-15812871)
chr3 (189-249)||(2731819-2731881)
chr3 (168-248)||(11665952-11666034)
chr3 (209-255)||(4201397-4201443)
chr3 (206-256)||(7928450-7928500)
chr3 (184-255)||(8039820-8039893)
chr3 (150-257)||(34307737-34307840)
chr3 (174-248)||(4987266-4987342)
chr3 (174-248)||(14209121-14209197)
chr3 (210-255)||(14840304-14840349)
chr3 (174-256)||(15796269-15796353)
chr3 (211-248)||(27277852-27277889)
chr3 (212-256)||(10268501-10268545)
chr3 (209-256)||(7614427-7614474)
chr3 (209-256)||(8842330-8842376)
chr3 (209-256)||(10690274-10690321)
chr3 (201-248)||(11251986-11252033)
chr3 (206-245)||(15314885-15314924)
chr3 (206-253)||(38731221-38731268)
chr3 (178-248)||(2620034-2620104)
chr3 (210-256)||(8383257-8383303)
chr3 (206-256)||(25093502-25093552)
chr3 (213-251)||(28098143-28098181)
chr3 (206-248)||(48202278-48202320)
chr3 (212-257)||(1509538-1509583)
chr3 (208-257)||(9624640-9624689)
chr3 (206-251)||(11658820-11658865)
chr3 (207-248)||(12704015-12704056)
chr3 (174-248)||(17005594-17005670)
chr3 (206-246)||(8789559-8789599)
chr3 (208-248)||(11493372-11493412)
chr3 (206-242)||(35222952-35222988)
chr3 (212-248)||(55401083-55401119)
[»] chr1 (60 HSPs)
chr1 (174-248)||(12713302-12713378)
chr1 (174-248)||(12717393-12717469)
chr1 (206-256)||(39953155-39953205)
chr1 (209-256)||(34257922-34257969)
chr1 (178-246)||(44482240-44482310)
chr1 (206-256)||(1864889-1864939)
chr1 (174-248)||(12707848-12707924)
chr1 (207-248)||(14332652-14332693)
chr1 (210-259)||(25272479-25272528)
chr1 (179-256)||(17754311-17754390)
chr1 (206-249)||(39130776-39130819)
chr1 (206-256)||(2784556-2784606)
chr1 (206-248)||(7918220-7918262)
chr1 (206-256)||(13997883-13997933)
chr1 (206-256)||(25098564-25098614)
chr1 (183-246)||(25361896-25361961)
chr1 (174-256)||(26238091-26238171)
chr1 (174-257)||(34371713-34371797)
chr1 (206-248)||(34712392-34712434)
chr1 (210-256)||(36878461-36878507)
chr1 (206-255)||(6427351-6427400)
chr1 (174-248)||(16164290-16164366)
chr1 (207-248)||(40181879-40181920)
chr1 (206-246)||(19324572-19324612)
chr1 (206-242)||(30749854-30749890)
chr1 (206-242)||(30771305-30771341)
chr1 (212-256)||(41877485-41877529)
chr1 (183-248)||(42004937-42004998)
chr1 (209-272)||(48148049-48148112)
chr1 (183-255)||(36905998-36906072)
chr1 (206-253)||(52903252-52903299)
chr1 (210-256)||(398778-398824)
chr1 (206-248)||(10233261-10233303)
chr1 (206-248)||(12443469-12443511)
chr1 (206-248)||(13436466-13436508)
chr1 (206-256)||(17425102-17425152)
chr1 (206-256)||(17831540-17831590)
chr1 (206-256)||(20157359-20157409)
chr1 (210-256)||(21530689-21530735)
chr1 (209-255)||(28674801-28674847)
chr1 (206-256)||(32724107-32724157)
chr1 (210-248)||(34298444-34298482)
chr1 (206-248)||(35999331-35999373)
chr1 (206-256)||(38503320-38503370)
chr1 (206-255)||(9709821-9709870)
chr1 (174-248)||(9828052-9828128)
chr1 (190-248)||(10572580-10572640)
chr1 (213-250)||(15323169-15323206)
chr1 (209-246)||(20131987-20132024)
chr1 (174-248)||(32461439-32461514)
chr1 (209-242)||(45534202-45534235)
chr1 (178-248)||(47989505-47989577)
chr1 (216-256)||(2896140-2896180)
chr1 (208-256)||(5898277-5898325)
chr1 (212-248)||(22515902-22515938)
chr1 (212-248)||(22881631-22881667)
chr1 (174-239)||(25934633-25934700)
chr1 (206-257)||(29229460-29229512)
chr1 (212-248)||(31015051-31015087)
chr1 (212-248)||(37055871-37055907)
[»] chr7 (42 HSPs)
chr7 (184-256)||(29787356-29787428)
chr7 (178-248)||(15902830-15902902)
chr7 (178-256)||(32308120-32308200)
chr7 (208-256)||(27093424-27093472)
chr7 (208-256)||(27184829-27184877)
chr7 (206-257)||(8160415-8160466)
chr7 (182-257)||(11700802-11700877)
chr7 (206-253)||(17851434-17851481)
chr7 (206-256)||(1433454-1433504)
chr7 (206-256)||(2948683-2948733)
chr7 (195-250)||(5233635-5233692)
chr7 (206-242)||(18213042-18213078)
chr7 (206-258)||(27732248-27732300)
chr7 (206-248)||(3721101-3721143)
chr7 (206-248)||(7328700-7328742)
chr7 (206-248)||(16341504-16341546)
chr7 (206-256)||(20549791-20549841)
chr7 (206-256)||(22602719-22602769)
chr7 (206-256)||(33384591-33384641)
chr7 (172-256)||(49088810-49088892)
chr7 (174-256)||(26329357-26329441)
chr7 (206-254)||(2425742-2425790)
chr7 (175-248)||(6630888-6630963)
chr7 (206-258)||(42720899-42720951)
chr7 (209-256)||(5235986-5236033)
chr7 (176-248)||(24339650-24339724)
chr7 (206-249)||(38143230-38143273)
chr7 (206-256)||(5548676-5548726)
chr7 (206-248)||(12278843-12278885)
chr7 (206-256)||(19206050-19206100)
chr7 (206-256)||(22484025-22484075)
chr7 (206-248)||(22868050-22868092)
chr7 (206-248)||(24146824-24146866)
chr7 (190-256)||(30731037-30731103)
chr7 (211-248)||(2424622-2424659)
chr7 (212-249)||(9408349-9408386)
chr7 (207-256)||(23191896-23191945)
chr7 (209-246)||(35493423-35493460)
chr7 (209-242)||(39138458-39138491)
chr7 (206-246)||(9482944-9482984)
chr7 (208-256)||(10377507-10377555)
chr7 (208-236)||(41020516-41020544)
[»] chr6 (51 HSPs)
chr6 (174-275)||(25038046-25038148)
chr6 (206-256)||(5732519-5732569)
chr6 (206-248)||(7086803-7086845)
chr6 (206-256)||(19040352-19040402)
chr6 (201-255)||(31579229-31579283)
chr6 (178-256)||(5970087-5970167)
chr6 (206-255)||(7265602-7265651)
chr6 (195-248)||(8805570-8805623)
chr6 (174-248)||(16766705-16766781)
chr6 (209-257)||(5462685-5462733)
chr6 (209-256)||(9658879-9658926)
chr6 (174-242)||(16488565-16488635)
chr6 (210-257)||(32511679-32511726)
chr6 (206-248)||(9025503-9025545)
chr6 (206-248)||(9195763-9195805)
chr6 (206-256)||(10842532-10842582)
chr6 (206-256)||(10888983-10889033)
chr6 (206-248)||(17302355-17302397)
chr6 (210-256)||(17341677-17341723)
chr6 (174-248)||(7248366-7248442)
chr6 (206-255)||(30866153-30866202)
chr6 (206-255)||(32298616-32298665)
chr6 (170-250)||(4118304-4118386)
chr6 (206-253)||(9617437-9617484)
chr6 (205-255)||(1532241-1532291)
chr6 (206-248)||(7151420-7151462)
chr6 (206-256)||(7377979-7378029)
chr6 (178-256)||(8713979-8714060)
chr6 (206-256)||(9027178-9027228)
chr6 (206-256)||(9629383-9629433)
chr6 (206-244)||(11591879-11591917)
chr6 (207-245)||(13360382-13360420)
chr6 (206-256)||(13851736-13851786)
chr6 (134-248)||(17435207-17435324)
chr6 (206-248)||(24832596-24832638)
chr6 (206-248)||(26178690-26178732)
chr6 (206-244)||(26562701-26562739)
chr6 (209-251)||(32248937-32248979)
chr6 (207-257)||(32320679-32320729)
chr6 (213-255)||(34447374-34447416)
chr6 (190-248)||(9522899-9522959)
chr6 (207-248)||(24833243-24833284)
chr6 (190-248)||(34073338-34073398)
chr6 (208-256)||(677837-677885)
chr6 (208-248)||(7996389-7996429)
chr6 (208-248)||(8022372-8022412)
chr6 (206-258)||(14721239-14721291)
chr6 (206-238)||(17327664-17327696)
chr6 (212-248)||(17841604-17841640)
chr6 (206-258)||(21885790-21885842)
chr6 (212-248)||(25096431-25096467)
[»] chr4 (34 HSPs)
chr4 (206-256)||(22440609-22440659)
chr4 (207-254)||(903924-903971)
chr4 (206-256)||(5775367-5775417)
chr4 (206-246)||(13134460-13134500)
chr4 (209-256)||(21539879-21539926)
chr4 (210-256)||(8423731-8423777)
chr4 (206-256)||(11931280-11931330)
chr4 (206-248)||(36635332-36635374)
chr4 (206-256)||(40613450-40613500)
chr4 (206-256)||(40742591-40742641)
chr4 (208-248)||(7214533-7214573)
chr4 (206-238)||(10499279-10499311)
chr4 (206-245)||(17876166-17876205)
chr4 (174-254)||(30982853-30982935)
chr4 (176-256)||(38148702-38148784)
chr4 (174-242)||(46083966-46084036)
chr4 (206-248)||(999357-999399)
chr4 (209-251)||(3731208-3731250)
chr4 (214-248)||(17446079-17446113)
chr4 (177-236)||(19500836-19500897)
chr4 (206-248)||(33950144-33950186)
chr4 (208-258)||(40179647-40179697)
chr4 (206-256)||(48139264-48139314)
chr4 (194-248)||(49652969-49653023)
chr4 (212-249)||(6485626-6485663)
chr4 (206-255)||(16189710-16189759)
chr4 (206-243)||(17344513-17344550)
chr4 (174-236)||(22234865-22234929)
chr4 (212-249)||(27706192-27706229)
chr4 (206-251)||(44081586-44081631)
chr4 (211-275)||(2234232-2234295)
chr4 (183-256)||(7012066-7012141)
chr4 (207-247)||(9996849-9996889)
chr4 (206-246)||(18576046-18576086)
[»] chr5 (35 HSPs)
chr5 (174-256)||(3966503-3966587)
chr5 (174-256)||(18592073-18592157)
chr5 (206-256)||(27144463-27144513)
chr5 (174-256)||(11685939-11686022)
chr5 (206-255)||(36838544-36838593)
chr5 (205-257)||(24273038-24273090)
chr5 (205-257)||(24389124-24389176)
chr5 (208-248)||(35017045-35017085)
chr5 (206-257)||(6471898-6471949)
chr5 (174-242)||(21814275-21814345)
chr5 (206-256)||(7175028-7175078)
chr5 (206-248)||(16203804-16203846)
chr5 (210-256)||(28588687-28588733)
chr5 (207-256)||(2577190-2577239)
chr5 (174-248)||(21522758-21522834)
chr5 (174-248)||(21533324-21533400)
chr5 (206-255)||(30502397-30502446)
chr5 (206-255)||(30542740-30542789)
chr5 (206-246)||(14873527-14873567)
chr5 (206-242)||(39758286-39758322)
chr5 (174-242)||(6401512-6401582)
chr5 (209-248)||(12927662-12927701)
chr5 (210-257)||(23016002-23016049)
chr5 (210-253)||(30098329-30098372)
chr5 (206-248)||(23012417-23012459)
chr5 (206-256)||(23220983-23221033)
chr5 (209-251)||(28262408-28262450)
chr5 (193-256)||(38749557-38749622)
chr5 (206-248)||(41091266-41091308)
chr5 (209-258)||(17593734-17593783)
chr5 (212-248)||(14674277-14674313)
chr5 (206-246)||(18421850-18421890)
chr5 (206-250)||(19429438-19429482)
chr5 (212-248)||(19579709-19579745)
chr5 (212-248)||(33178033-33178069)
[»] scaffold1528 (1 HSPs)
scaffold1528 (179-256)||(1035-1114)
[»] scaffold0236 (1 HSPs)
scaffold0236 (210-258)||(25781-25829)
[»] scaffold0110 (1 HSPs)
scaffold0110 (195-256)||(28850-28913)
[»] scaffold0022 (2 HSPs)
scaffold0022 (206-256)||(99893-99943)
scaffold0022 (209-255)||(90844-90890)
[»] scaffold0044 (1 HSPs)
scaffold0044 (174-247)||(53189-53264)
[»] scaffold0024 (1 HSPs)
scaffold0024 (210-254)||(68255-68299)
[»] scaffold0008 (1 HSPs)
scaffold0008 (168-248)||(263341-263423)
[»] scaffold0697 (1 HSPs)
scaffold0697 (210-256)||(1644-1690)
[»] scaffold0036 (1 HSPs)
scaffold0036 (206-248)||(9756-9798)
[»] scaffold0020 (1 HSPs)
scaffold0020 (206-248)||(135321-135363)
[»] scaffold0003 (1 HSPs)
scaffold0003 (174-236)||(241614-241678)
[»] scaffold0136 (1 HSPs)
scaffold0136 (212-256)||(3864-3908)
[»] scaffold0027 (1 HSPs)
scaffold0027 (212-256)||(46682-46726)
[»] scaffold0018 (1 HSPs)
scaffold0018 (212-256)||(192264-192308)
[»] scaffold0011 (1 HSPs)
scaffold0011 (212-248)||(17764-17800)


Alignment Details
Target: chr2 (Bit Score: 141; Significance: 6e-74; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 99 - 275
Target Start/End: Original strand, 2665790 - 2665966
Alignment:
Q  99 agttttataataatcattgtatgtcgataactaccaagtacggcacttttcggattagacgtgcatcattatcaaacacgtgttgtgtccaacaccgaca 198  Q
    ||||||||||||||||||||| |||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  2665790 agttttataataatcattgtacgtcgataactacgaagtacgacacttttcggattagacgtgcatcattatcaaacacgtgttgtgttcaacaccgaca 2665889  T
Q  199 caacacccacatataattacactaaattatgtgattttctaaaattattaacggtgtcaaacatgtcagtatctgtg 275  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  ||||| | |||||||| ||||||||    
T  2665890 caacacccacatataattacactaaattatgtgattttctaaaattattagtggtgttagacatgtcactatctgtg 2665966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 174 - 257
Target Start/End: Complemental strand, 44860404 - 44860319
Alignment:
Q  174 acacgtgttgtgtccaacaccgacacaacacc--cacatataattacactaaattatgtgattttctaaaattattaacggtgtca 257  Q
    |||| ||| |||||||||||| |||| |||||  |||||||||||||||| ||||||| |||||||| ||||||||| ||||||||    
T  44860404 acacatgtcgtgtccaacaccaacacgacaccgacacatataattacactgaattatgcgattttctcaaattattagcggtgtca 44860319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 178 - 242
Target Start/End: Original strand, 34784961 - 34785027
Alignment:
Q  178 gtgttgtgtccaacaccgacacaacacc--cacatataattacactaaattatgtgattttctaaaa 242  Q
    |||| |||||| | |||||||| |||||  |||||||||||||||||||||||||||||||||||||    
T  34784961 gtgtcgtgtccgataccgacacgacaccgacacatataattacactaaattatgtgattttctaaaa 34785027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 206 - 256
Target Start/End: Complemental strand, 21616812 - 21616762
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 256  Q
    |||||||||||||||| |||||||||||||||| ||||||||| |||||||    
T  21616812 cacatataattacactgaattatgtgattttctcaaattattagcggtgtc 21616762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 207 - 253
Target Start/End: Complemental strand, 36281734 - 36281688
Alignment:
Q  207 acatataattacactaaattatgtgattttctaaaattattaacggt 253  Q
    |||||| ||||||||||||||||||||||||| ||||||||||||||    
T  36281734 acatatgattacactaaattatgtgattttctcaaattattaacggt 36281688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 174 - 255
Target Start/End: Complemental strand, 2331876 - 2331795
Alignment:
Q  174 acacgtgttgtgtccaacaccgacacaacacccacatataattacactaaattatgtgattttctaaaattattaacggtgt 255  Q
    ||||||| |||| || |||| ||||| ||||| ||| |||| |||||| |||||||||||||||| |||||||||| |||||    
T  2331876 acacgtgctgtgcccgacactgacacgacaccgacacataaatacactgaattatgtgattttctcaaattattaatggtgt 2331795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 206 - 255
Target Start/End: Original strand, 30527604 - 30527653
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaattattaacggtgt 255  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||| ||||    
T  30527604 cacatataattacactaaattatatgattttctcaaattattaacagtgt 30527653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 206 - 242
Target Start/End: Original strand, 20922937 - 20922973
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaa 242  Q
    |||||||||||||||||||||||||||||||||||||    
T  20922937 cacatataattacactaaattatgtgattttctaaaa 20922973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 174 - 235
Target Start/End: Complemental strand, 28524510 - 28524447
Alignment:
Q  174 acacgtgttgtgtccaacaccgacacaacacc--cacatataattacactaaattatgtgattt 235  Q
    ||||||||||||||| ||||| |||||||| |  |||||||||||||||| |||||||||||||    
T  28524510 acacgtgttgtgtccgacaccaacacaacaacgacacatataattacactgaattatgtgattt 28524447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 174 - 255
Target Start/End: Original strand, 22084805 - 22084890
Alignment:
Q  174 acacgtgttgtgtccaacaccgacacaacacc--cacatataa--ttacactaaattatgtgattttctaaaattattaacggtgt 255  Q
    ||||||||||||||| |||| ||||| | |||  |||||||||  ||||||| |||||| ||||||||| ||||||||||||||||    
T  22084805 acacgtgttgtgtccgacactgacacgataccggcacatataaaattacactgaattatatgattttctcaaattattaacggtgt 22084890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 206 - 256
Target Start/End: Complemental strand, 23718076 - 23718026
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 256  Q
    |||||||||||||||| |||||||||| ||||| ||||||||| |||||||    
T  23718076 cacatataattacactgaattatgtgactttctcaaattattagcggtgtc 23718026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 206 - 256
Target Start/End: Complemental strand, 24105748 - 24105698
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 256  Q
    |||||||||||||||| |||||||||| ||||| ||||||||| |||||||    
T  24105748 cacatataattacactgaattatgtgactttctcaaattattagcggtgtc 24105698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 206 - 256
Target Start/End: Complemental strand, 31808127 - 31808077
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 256  Q
    |||||||||||||||| |||||||||||||| | ||||||||| |||||||    
T  31808127 cacatataattacactgaattatgtgattttgttaaattattagcggtgtc 31808077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 206 - 256
Target Start/End: Original strand, 37411253 - 37411303
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 256  Q
    |||||||||| ||||| |||||||||||||||| ||||||||| |||||||    
T  37411253 cacatataatcacactgaattatgtgattttctcaaattattagcggtgtc 37411303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 173 - 257
Target Start/End: Complemental strand, 4207941 - 4207856
Alignment:
Q  173 aacacgtgttgtgtccaacaccgacacaacacccaca-tataattacactaaattatgtgattttctaaaattattaacggtgtca 257  Q
    ||||||||| |||||| |||||||||| | ||| ||| |||||||||||||||||||| | |||| | |||||||||  |||||||    
T  4207941 aacacgtgtcgtgtccgacaccgacacgataccgacaatataattacactaaattatgcgcttttttcaaattattagtggtgtca 4207856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 202 - 255
Target Start/End: Complemental strand, 28412404 - 28412351
Alignment:
Q  202 cacccacatataattacactaaattatgtgattttctaaaattattaacggtgt 255  Q
    |||| ||| ||||||||||| |||||||||||||| | ||||||||||||||||    
T  28412404 caccgacacataattacactgaattatgtgattttatcaaattattaacggtgt 28412351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 207 - 256
Target Start/End: Complemental strand, 28677958 - 28677909
Alignment:
Q  207 acatataattacactaaattatgtgattttctaaaattattaacggtgtc 256  Q
    ||||||||||||||| |||||||||||||| | ||||||||| |||||||    
T  28677958 acatataattacactgaattatgtgattttttcaaattattagcggtgtc 28677909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 210 - 255
Target Start/End: Complemental strand, 31018636 - 31018591
Alignment:
Q  210 tataattacactaaattatgtgattttctaaaattattaacggtgt 255  Q
    |||||||||||||||| |||||||||||| ||||||||| ||||||    
T  31018636 tataattacactaaatcatgtgattttctgaaattattagcggtgt 31018591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 206 - 255
Target Start/End: Complemental strand, 35449563 - 35449514
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaattattaacggtgt 255  Q
    |||||||||||||||| |||| ||||||||||| ||||||||||| ||||    
T  35449563 cacatataattacactgaattctgtgattttctcaaattattaacagtgt 35449514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 206 - 255
Target Start/End: Complemental strand, 39279725 - 39279676
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaattattaacggtgt 255  Q
    |||||||||||||||| |||||| ||||||||| | ||||||||||||||    
T  39279725 cacatataattacactgaattatttgattttctcatattattaacggtgt 39279676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 206 - 242
Target Start/End: Original strand, 20242736 - 20242772
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaa 242  Q
    |||||||||||||||| ||||||||||||||||||||    
T  20242736 cacatataattacactgaattatgtgattttctaaaa 20242772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 205 - 256
Target Start/End: Complemental strand, 19574029 - 19573978
Alignment:
Q  205 ccacatataattacactaaattatgtgattttctaaaattattaacggtgtc 256  Q
    |||| |||||||||||| |||||||| ||||||| ||||||||| |||||||    
T  19574029 ccacctataattacactgaattatgttattttcttaaattattatcggtgtc 19573978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 210 - 253
Target Start/End: Complemental strand, 23921299 - 23921256
Alignment:
Q  210 tataattacactaaattatgtgattttctaaaattattaacggt 253  Q
    |||||||||||| |||||||| ||||||| ||||||||||||||    
T  23921299 tataattacactgaattatgtaattttctcaaattattaacggt 23921256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 174 - 238
Target Start/End: Complemental strand, 35056952 - 35056886
Alignment:
Q  174 acacgtgttgtgtccaacaccgacacaacacc--cacatataattacactaaattatgtgattttct 238  Q
    |||||||| |||||| |||||||||| |||||  |||||||||||||||| |||||| || ||||||    
T  35056952 acacgtgtcgtgtccgacaccgacacgacaccgacacatataattacactgaattatatggttttct 35056886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 201 - 256
Target Start/End: Original strand, 36409631 - 36409686
Alignment:
Q  201 acacccacatataattacactaaattatgtgattttctaaaattattaacggtgtc 256  Q
    ||||| ||| |||||||||||||||||||||||||| | ||||||| | |||||||    
T  36409631 acaccgacacataattacactaaattatgtgattttttcaaattatcagcggtgtc 36409686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 206 - 248
Target Start/End: Complemental strand, 5367242 - 5367200
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaattatta 248  Q
    |||||||||||||||| ||||||||||||| || |||||||||    
T  5367242 cacatataattacactgaattatgtgatttcctcaaattatta 5367200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 206 - 256
Target Start/End: Original strand, 16069263 - 16069313
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 256  Q
    |||| ||||||||||| |||||| ||||||| | |||||||||||||||||    
T  16069263 cacaaataattacactgaattatatgatttttttaaattattaacggtgtc 16069313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 206 - 256
Target Start/End: Complemental strand, 18276571 - 18276521
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 256  Q
    |||| ||||||||||| ||||| |||||||||| ||||||||| |||||||    
T  18276571 cacacataattacactgaattaagtgattttctcaaattattagcggtgtc 18276521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 209 - 251
Target Start/End: Original strand, 35191591 - 35191633
Alignment:
Q  209 atataattacactaaattatgtgattttctaaaattattaacg 251  Q
    |||||||||| ||||||||||||||||||| ||||||| ||||    
T  35191591 atataattaccctaaattatgtgattttctcaaattatcaacg 35191633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 248
Target Start/End: Original strand, 21782832 - 21782869
Alignment:
Q  211 ataattacactaaattatgtgattttctaaaattatta 248  Q
    ||||||||||| |||||||||||||||| |||||||||    
T  21782832 ataattacactgaattatgtgattttctcaaattatta 21782869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 212 - 256
Target Start/End: Original strand, 30404865 - 30404909
Alignment:
Q  212 taattacactaaattatgtgattttctaaaattattaacggtgtc 256  Q
    |||||||||| |||||||||||||| | ||||||||||| |||||    
T  30404865 taattacactgaattatgtgattttttcaaattattaaccgtgtc 30404909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 174 - 243
Target Start/End: Original strand, 38355862 - 38355933
Alignment:
Q  174 acacgtgttgtgtccaacaccgacacaacacc--cacatataattacactaaattatgtgattttctaaaat 243  Q
    ||||||||||| ||||||||| | |  |||||  |||||||||| ||||| |||||||||||||||| ||||    
T  38355862 acacgtgttgtatccaacaccaatatgacaccgacacatataatcacactgaattatgtgattttctcaaat 38355933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 209 - 249
Target Start/End: Original strand, 40361766 - 40361806
Alignment:
Q  209 atataattacactaaattatgtgattttctaaaattattaa 249  Q
    |||||||||||||||||||||| ||||| | ||||||||||    
T  40361766 atataattacactaaattatgtaattttttcaaattattaa 40361806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 174 - 257
Target Start/End: Original strand, 44500 - 44585
Alignment:
Q  174 acacgtgttgtgtccaacaccgacacaacacc--cacatataattacactaaattatgtgattttctaaaattattaacggtgtca 257  Q
    |||||||||||||||||||||||||| | |||  |||||||||||||||| |||||||||||||||| ||||| ||| ||||||||    
T  44500 acacgtgttgtgtccaacaccgacacgataccgacacatataattacactgaattatgtgattttctcaaatttttagcggtgtca 44585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 47; Significance: 8e-18; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 186 - 257
Target Start/End: Complemental strand, 11803331 - 11803258
Alignment:
Q  186 tccaacaccgacacaacacc--cacatataattacactaaattatgtgattttctaaaattattaacggtgtca 257  Q
    ||||||||| ||||||||||  |||||||||||||||| |||||||||||||||| ||||||||||| ||||||    
T  11803331 tccaacaccaacacaacaccaacacatataattacactgaattatgtgattttcttaaattattaacagtgtca 11803258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 206 - 256
Target Start/End: Original strand, 39954288 - 39954338
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 256  Q
    ||||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  39954288 cacatataattacactaaattatgtgattttctcaaattattagcggtgtc 39954338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 206 - 256
Target Start/End: Original strand, 4786347 - 4786397
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 256  Q
    |||||||||||||||| |||||||||||||||| |||||||||| ||||||    
T  4786347 cacatataattacactgaattatgtgattttcttaaattattaatggtgtc 4786397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 206 - 248
Target Start/End: Complemental strand, 14731762 - 14731720
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaattatta 248  Q
    ||||||||||||||||||||||||||||||||| |||||||||    
T  14731762 cacatataattacactaaattatgtgattttctcaaattatta 14731720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 206 - 256
Target Start/End: Complemental strand, 34897135 - 34897085
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 256  Q
    |||||||||||||||| |||||||||||||||| ||||||||| |||||||    
T  34897135 cacatataattacactgaattatgtgattttctcaaattattagcggtgtc 34897085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 206 - 250
Target Start/End: Original strand, 33405393 - 33405437
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaattattaac 250  Q
    |||||||||||||||||||||||||| |||||| |||||||||||    
T  33405393 cacatataattacactaaattatgtgtttttctcaaattattaac 33405437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 206 - 256
Target Start/End: Original strand, 11927095 - 11927145
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 256  Q
    |||||||||||||||| |||||||||||||| | ||||||||||| |||||    
T  11927095 cacatataattacactgaattatgtgattttatcaaattattaacagtgtc 11927145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 206 - 248
Target Start/End: Original strand, 13844605 - 13844647
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaattatta 248  Q
    |||||||||||||||| |||||||||||||||| |||||||||    
T  13844605 cacatataattacactcaattatgtgattttctcaaattatta 13844647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 177 - 248
Target Start/End: Original strand, 15816107 - 15816180
Alignment:
Q  177 cgtgttgtgtccaacaccgacacaacacccaca--tataattacactaaattatgtgattttctaaaattatta 248  Q
    ||||| |||||| ||||| |||| ||||| |||  ||||||||||||||||||||||||||| | |||||||||    
T  15816107 cgtgtcgtgtccgacaccaacacgacaccgacacttataattacactaaattatgtgattttttcaaattatta 15816180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 206 - 256
Target Start/End: Original strand, 24362211 - 24362261
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 256  Q
    |||||||||||||||| |||||||||||| ||| ||||||||| |||||||    
T  24362211 cacatataattacactgaattatgtgattctctcaaattattagcggtgtc 24362261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 174 - 248
Target Start/End: Original strand, 2572031 - 2572107
Alignment:
Q  174 acacgtgttgtgtccaacaccgacacaacacccaca--tataattacactaaattatgtgattttctaaaattatta 248  Q
    |||||||| |||||| |||| ||||| ||||| |||  | ||||||||||||||||||||||||| | |||||||||    
T  2572031 acacgtgtcgtgtccgacacagacacgacaccgacacttgtaattacactaaattatgtgattttttcaaattatta 2572107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 207 - 256
Target Start/End: Complemental strand, 4611583 - 4611534
Alignment:
Q  207 acatataattacactaaattatgtgattttctaaaattattaacggtgtc 256  Q
    ||||||||||||||| |||||||| ||||||| ||||||||| |||||||    
T  4611583 acatataattacactgaattatgttattttctcaaattattagcggtgtc 4611534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 208 - 253
Target Start/End: Complemental strand, 13018329 - 13018284
Alignment:
Q  208 catataattacactaaattatgtgattttctaaaattattaacggt 253  Q
    ||||| ||||||||||||||||||||||| | ||||||||||||||    
T  13018329 catatcattacactaaattatgtgattttgtcaaattattaacggt 13018284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 206 - 255
Target Start/End: Original strand, 20785474 - 20785523
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaattattaacggtgt 255  Q
    |||||||||||||| ||||||||||||||| || ||||||||| ||||||    
T  20785474 cacatataattacattaaattatgtgatttcctcaaattattagcggtgt 20785523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 248
Target Start/End: Complemental strand, 29776113 - 29776044
Alignment:
Q  179 tgttgtgtccaacaccgacacaacacccacatataattacactaaattatgtgattttctaaaattatta 248  Q
    |||||||||| |||| |||  |||||| ||||||||||| ||| ||||| |||||||||| |||||||||    
T  29776113 tgttgtgtccgacactgacttaacaccgacatataattatactgaattacgtgattttctcaaattatta 29776044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 206 - 258
Target Start/End: Original strand, 12570517 - 12570569
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaattattaacggtgtcaa 258  Q
    |||||||||||||||| ||||||||| |||||| ||||||||| | |||||||    
T  12570517 cacatataattacacttaattatgtgtttttcttaaattattagcagtgtcaa 12570569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 250
Target Start/End: Original strand, 31580140 - 31580180
Alignment:
Q  210 tataattacactaaattatgtgattttctaaaattattaac 250  Q
    |||||||||||| |||||||||||||||| |||||||||||    
T  31580140 tataattacactcaattatgtgattttcttaaattattaac 31580180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 209 - 248
Target Start/End: Complemental strand, 14134746 - 14134707
Alignment:
Q  209 atataattacactaaattatgtgattttctaaaattatta 248  Q
    ||||||||||||| |||||||||||||||| |||||||||    
T  14134746 atataattacactgaattatgtgattttctcaaattatta 14134707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 210 - 248
Target Start/End: Complemental strand, 3025597 - 3025559
Alignment:
Q  210 tataattacactaaattatgtgattttctaaaattatta 248  Q
    |||||||||||| |||||||||||||||| |||||||||    
T  3025597 tataattacactgaattatgtgattttctcaaattatta 3025559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 206 - 268
Target Start/End: Original strand, 7472524 - 7472586
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaattattaacggtgtcaaacatgtcagt 268  Q
    |||||||||||||||||| |||||||||||  | |||||||||  |||||| || ||||||||    
T  7472524 cacatataattacactaatttatgtgatttctttaaattattagtggtgtcgaatatgtcagt 7472586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 206 - 256
Target Start/End: Complemental strand, 11944715 - 11944665
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 256  Q
    |||||||||||||||| | |||||||||||| | ||||||||||| |||||    
T  11944715 cacatataattacactgagttatgtgattttatcaaattattaacagtgtc 11944665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 209 - 251
Target Start/End: Complemental strand, 24447076 - 24447034
Alignment:
Q  209 atataattacactaaattatgtgattttctaaaattattaacg 251  Q
    |||||||||| ||||||||||||||||||| ||||||| ||||    
T  24447076 atataattaccctaaattatgtgattttctcaaattatcaacg 24447034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 206 - 248
Target Start/End: Complemental strand, 27213597 - 27213555
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaattatta 248  Q
    |||||||||||||| | |||||||||||||||| |||||||||    
T  27213597 cacatataattacagtgaattatgtgattttctgaaattatta 27213555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 206 - 248
Target Start/End: Original strand, 31236586 - 31236628
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaattatta 248  Q
    |||||||||||||| | |||||||||||||||| |||||||||    
T  31236586 cacatataattacattgaattatgtgattttctcaaattatta 31236628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 206 - 248
Target Start/End: Complemental strand, 34222997 - 34222955
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaattatta 248  Q
    |||||||||||||||| |||||||||||||| | |||||||||    
T  34222997 cacatataattacacttaattatgtgattttattaaattatta 34222955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 258
Target Start/End: Original strand, 12570746 - 12570795
Alignment:
Q  209 atataattacactaaattatgtgattttctaaaattattaacggtgtcaa 258  Q
    ||||||||||||| ||||||| | |||||| ||||||||| |||||||||    
T  12570746 atataattacacttaattatgcgtttttcttaaattattagcggtgtcaa 12570795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 257
Target Start/End: Complemental strand, 24669477 - 24669432
Alignment:
Q  212 taattacactaaattatgtgattttctaaaattattaacggtgtca 257  Q
    |||||||||| |||||||| |||| || ||||||||||||||||||    
T  24669477 taattacactgaattatgtaatttcctcaaattattaacggtgtca 24669432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 246
Target Start/End: Complemental strand, 26529788 - 26529751
Alignment:
Q  209 atataattacactaaattatgtgattttctaaaattat 246  Q
    |||||||||| ||||||||||||||||||| |||||||    
T  26529788 atataattaccctaaattatgtgattttctcaaattat 26529751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 239
Target Start/End: Original strand, 26902184 - 26902217
Alignment:
Q  206 cacatataattacactaaattatgtgattttcta 239  Q
    |||||||||||||||| |||||||||||||||||    
T  26902184 cacatataattacactgaattatgtgattttcta 26902217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 255
Target Start/End: Original strand, 33382028 - 33382077
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaattattaacggtgt 255  Q
    ||||||||||||| || |||||||| ||||||| ||||||||| ||||||    
T  33382028 cacatataattactctgaattatgtcattttcttaaattattatcggtgt 33382077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 254
Target Start/End: Original strand, 37283814 - 37283867
Alignment:
Q  201 acacccacatataattacactaaattatgtgattttctaaaattattaacggtg 254  Q
    ||||| ||| ||||||||||| |||||||||||||||| | ||||||| |||||    
T  37283814 acaccgacacataattacactgaattatgtgattttctcagattattagcggtg 37283867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 212 - 256
Target Start/End: Original strand, 4298901 - 4298945
Alignment:
Q  212 taattacactaaattatgtgattttctaaaattattaacggtgtc 256  Q
    |||||||| |||||||||||||||| | ||||||||||| |||||    
T  4298901 taattacattaaattatgtgattttttcaaattattaactgtgtc 4298945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 212 - 248
Target Start/End: Complemental strand, 8343016 - 8342980
Alignment:
Q  212 taattacactaaattatgtgattttctaaaattatta 248  Q
    ||||||||||||||||||||||||| | |||||||||    
T  8343016 taattacactaaattatgtgattttttcaaattatta 8342980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 212 - 248
Target Start/End: Complemental strand, 8343360 - 8343324
Alignment:
Q  212 taattacactaaattatgtgattttctaaaattatta 248  Q
    ||||||||||||||||||||||||| | |||||||||    
T  8343360 taattacactaaattatgtgattttttcaaattatta 8343324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 257
Target Start/End: Original strand, 18067954 - 18067994
Alignment:
Q  217 acactaaattatgtgattttctaaaattattaacggtgtca 257  Q
    ||||| |||||||||||||||| ||||||||| ||||||||    
T  18067954 acactgaattatgtgattttctcaaattattagcggtgtca 18067994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 206 - 242
Target Start/End: Complemental strand, 18964227 - 18964191
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaa 242  Q
    |||||||||||||| | ||||||||||||||||||||    
T  18964227 cacatataattacattgaattatgtgattttctaaaa 18964191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 274
Target Start/End: Original strand, 20679408 - 20679471
Alignment:
Q  210 tataattacactaaattatgtgattttctaaaattattaacggtgtcaaacatgtcagtatctgt 274  Q
    |||||||||||| || ||||||||||||| |||||||||  ||||||  |||||||||| |||||    
T  20679408 tataattacactgaactatgtgattttctcaaattattaggggtgtc-gacatgtcagtgtctgt 20679471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 212 - 248
Target Start/End: Complemental strand, 20873113 - 20873077
Alignment:
Q  212 taattacactaaattatgtgattttctaaaattatta 248  Q
    ||||||||||||||||||||||||| | |||||||||    
T  20873113 taattacactaaattatgtgattttttcaaattatta 20873077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 246
Target Start/End: Complemental strand, 22493555 - 22493504
Alignment:
Q  197 cacaacacccacatata--attacactaaattatgtgattttctaaaattat 246  Q
    ||||||||| |||||||  |||||||| |||||||||||||| |||||||||    
T  22493555 cacaacaccgacatatatgattacactgaattatgtgattttttaaaattat 22493504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 47; Significance: 8e-18; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 206 - 256
Target Start/End: Original strand, 32804549 - 32804599
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 256  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  32804549 cacatataattacactaaattatgtgattttctcaaattattaacggtgtc 32804599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 206 - 253
Target Start/End: Original strand, 49505163 - 49505210
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaattattaacggt 253  Q
    ||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  49505163 cacatataattacactaaattatgtgattttctcaaattattagcggt 49505210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 206 - 248
Target Start/End: Original strand, 11313809 - 11313851
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaattatta 248  Q
    ||||||||||||||||||||||||||||||||| |||||||||    
T  11313809 cacatataattacactaaattatgtgattttctcaaattatta 11313851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 206 - 256
Target Start/End: Original strand, 16192759 - 16192809
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 256  Q
    |||||||||||||||| |||||||| ||||||| |||||||||||||||||    
T  16192759 cacatataattacactgaattatgttattttctcaaattattaacggtgtc 16192809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 174 - 256
Target Start/End: Complemental strand, 25064991 - 25064909
Alignment:
Q  174 acacgtgttgtgtccaacaccgacacaacacccacatataattacactaaattatgtgattttctaaaattattaacggtgtc 256  Q
    |||||||| |||||| ||||| |||| | ||| ||| |||||||||||||||||||||||||| | |||| |||| |||||||    
T  25064991 acacgtgtcgtgtccgacaccaacacgataccaacacataattacactaaattatgtgattttttcaaatcattagcggtgtc 25064909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 174 - 256
Target Start/End: Complemental strand, 55213046 - 55212963
Alignment:
Q  174 acacgtgttgtgtccaacaccgacacaacacccaca--tataattacactaaattatgtgattttctaaaattattaacggtgtc 256  Q
    |||||||||||| || ||||||||||| |||| |||  | ||||| ||||||||||||||||||| ||||||||||||| |||||    
T  55213046 acacgtgttgtgcccgacaccgacaca-caccgacacttgtaattgcactaaattatgtgattttttaaaattattaactgtgtc 55212963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 175 - 247
Target Start/End: Original strand, 15812799 - 15812871
Alignment:
Q  175 cacgtgttgtgtccaacaccgacacaacacccacatataattacactaaattatgtgattttctaaaattatt 247  Q
    ||||||| |||||| ||||| |||| |||||  |||||||||||||| | |||||||||||||| ||||||||    
T  15812799 cacgtgtcgtgtccgacaccaacacgacaccggcatataattacactgagttatgtgattttctcaaattatt 15812871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 189 - 249
Target Start/End: Complemental strand, 2731881 - 2731819
Alignment:
Q  189 aacaccgacacaacacc--cacatataattacactaaattatgtgattttctaaaattattaa 249  Q
    ||||||||||||||||   |||||||||||||||| |||||||||||||||| ||| ||||||    
T  2731881 aacaccgacacaacacatacacatataattacacttaattatgtgattttcttaaagtattaa 2731819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 168 - 248
Target Start/End: Complemental strand, 11666034 - 11665952
Alignment:
Q  168 tatcaaacacgtgttgtgtccaacaccgacacaacacc--cacatataattacactaaattatgtgattttctaaaattatta 248  Q
    ||||| |||||||| ||||| |||| | |||| |||||  ||||||||||||||||||||| ||||||||| | |||||||||    
T  11666034 tatcagacacgtgtcgtgtctaacatcaacacgacaccgacacatataattacactaaattgtgtgattttatcaaattatta 11665952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 209 - 255
Target Start/End: Complemental strand, 4201443 - 4201397
Alignment:
Q  209 atataattacactaaattatgtgattttctaaaattattaacggtgt 255  Q
    ||||||||||||| |||||||||||||| | ||||||||||||||||    
T  4201443 atataattacacttaattatgtgattttttcaaattattaacggtgt 4201397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 206 - 256
Target Start/End: Complemental strand, 7928500 - 7928450
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 256  Q
    |||||||||||||||| |||||||||||||| | ||||||||| |||||||    
T  7928500 cacatataattacactgaattatgtgattttttcaaattattagcggtgtc 7928450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 255
Target Start/End: Original strand, 8039820 - 8039893
Alignment:
Q  184 tgtccaacaccgacacaacacc--cacatataattacactaaattatgtgattttctaaaattattaacggtgt 255  Q
    ||||| |||||||||| |||||  |||||||||||||||| |||||| | ||||||| ||||||||| ||||||    
T  8039820 tgtccgacaccgacacgacaccgacacatataattacactgaattatataattttctcaaattattagcggtgt 8039893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 150 - 257
Target Start/End: Original strand, 34307737 - 34307840
Alignment:
Q  150 ggattagacgtgcatcattatcaaacacgtgttgtgtccaacaccgacacaacacccacatataattacactaaattatgtgattttctaaaattattaa 249  Q
    ||||||| ||||  ||| |||| || |||||| |||||| |||||||||| ||||     |||||||||||| || ||||||||||||| |||||||||     
T  34307737 ggattaggcgtgtctcagtatcgaagacgtgtcgtgtccgacaccgacacgacact----tataattacactgaaatatgtgattttctcaaattattag 34307832  T
Q  250 cggtgtca 257  Q
    ||||||||    
T  34307833 cggtgtca 34307840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 174 - 248
Target Start/End: Original strand, 4987266 - 4987342
Alignment:
Q  174 acacgtgttgtgtccaacaccgacacaacacccaca--tataattacactaaattatgtgattttctaaaattatta 248  Q
    |||||||| |||||||||||||||||  |||| |||  | |||||||||| |||||||||||||| | |||||||||    
T  4987266 acacgtgtcgtgtccaacaccgacacgtcaccaacacttgtaattacactgaattatgtgattttttcaaattatta 4987342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 174 - 248
Target Start/End: Complemental strand, 14209197 - 14209121
Alignment:
Q  174 acacgtgttgtgtccaacaccgacacaacacccaca--tataattacactaaattatgtgattttctaaaattatta 248  Q
    |||||||| |||||| |||||||||| ||||  |||  | |||||||||| |||||||||||||| |||||||||||    
T  14209197 acacgtgtcgtgtccgacaccgacacgacactgacacttgtaattacactgaattatgtgattttttaaaattatta 14209121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 210 - 255
Target Start/End: Original strand, 14840304 - 14840349
Alignment:
Q  210 tataattacactaaattatgtgattttctaaaattattaacggtgt 255  Q
    |||||||||||| |||||||||||||||| |||||||||| |||||    
T  14840304 tataattacactgaattatgtgattttctgaaattattaatggtgt 14840349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 174 - 256
Target Start/End: Original strand, 15796269 - 15796353
Alignment:
Q  174 acacgtgttgtgtccaacaccgacacaacacccaca--tataattacactaaattatgtgattttctaaaattattaacggtgtc 256  Q
    ||||||||||||||| ||||| |||| ||||| |||  | |||||||||| |||||| ||||||| | ||||||||||| |||||    
T  15796269 acacgtgttgtgtccgacacctacacgacaccgacaattgtaattacactgaattatatgattttttcaaattattaactgtgtc 15796353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 211 - 248
Target Start/End: Original strand, 27277852 - 27277889
Alignment:
Q  211 ataattacactaaattatgtgattttctaaaattatta 248  Q
    |||||||||||||||||||||||||||| |||||||||    
T  27277852 ataattacactaaattatgtgattttctcaaattatta 27277889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 256
Target Start/End: Original strand, 10268501 - 10268545
Alignment:
Q  212 taattacactaaattatgtgattttctaaaattattaacggtgtc 256  Q
    ||||||||||||||||||||||||| | ||||||||||| |||||    
T  10268501 taattacactaaattatgtgattttttcaaattattaactgtgtc 10268545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 209 - 256
Target Start/End: Original strand, 7614427 - 7614474
Alignment:
Q  209 atataattacactaaattatgtgattttctaaaattattaacggtgtc 256  Q
    ||||||||| ||| |||||||||||||||| ||||||||||| |||||    
T  7614427 atataattatactgaattatgtgattttcttaaattattaactgtgtc 7614474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 209 - 256
Target Start/End: Complemental strand, 8842376 - 8842330
Alignment:
Q  209 atataattacactaaattatgtgattttctaaaattattaacggtgtc 256  Q
    |||||||||||| |||||||||||||||| |||||||||| |||||||    
T  8842376 atataattacaccaaattatgtgattttc-aaaattattagcggtgtc 8842330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 209 - 256
Target Start/End: Original strand, 10690274 - 10690321
Alignment:
Q  209 atataattacactaaattatgtgattttctaaaattattaacggtgtc 256  Q
    ||||||||||||| |||||||||||||||| | ||||||| |||||||    
T  10690274 atataattacactgaattatgtgattttctcagattattagcggtgtc 10690321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 201 - 248
Target Start/End: Complemental strand, 11252033 - 11251986
Alignment:
Q  201 acacccacatataattacactaaattatgtgattttctaaaattatta 248  Q
    ||||| ||| ||||||||||| |||||||||||||||| |||||||||    
T  11252033 acaccgacacataattacactgaattatgtgattttctcaaattatta 11251986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 206 - 245
Target Start/End: Original strand, 15314885 - 15314924
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaatta 245  Q
    ||||||||||||||||||||||||||||||| | ||||||    
T  15314885 cacatataattacactaaattatgtgattttttcaaatta 15314924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 206 - 253
Target Start/End: Complemental strand, 38731268 - 38731221
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaattattaacggt 253  Q
    ||||||||| |||||| |||||||||||||| ||||||||||| ||||    
T  38731268 cacatataactacactgaattatgtgattttttaaaattattagcggt 38731221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 248
Target Start/End: Original strand, 2620034 - 2620104
Alignment:
Q  178 gtgttgtgtccaacaccgacacaacacccacatataattacactaaattatgtgattttctaaaattatta 248  Q
    |||| ||||| ||||||| ||| ||||| ||| ||| ||||||| |||||||||||||||| |||| ||||    
T  2620034 gtgtcgtgtctaacaccgccacgacaccaacacatagttacacttaattatgtgattttctcaaatgatta 2620104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 210 - 256
Target Start/End: Complemental strand, 8383303 - 8383257
Alignment:
Q  210 tataattacactaaattatgtgattttctaaaattattaacggtgtc 256  Q
    |||||||||||| |||||| ||||||||| ||||||||| |||||||    
T  8383303 tataattacactgaattatatgattttctcaaattattagcggtgtc 8383257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 206 - 256
Target Start/End: Complemental strand, 25093552 - 25093502
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 256  Q
    |||||||||||||||| |||| ||||||||||| |||| |||||| |||||    
T  25093552 cacatataattacactgaattgtgtgattttctcaaatcattaacagtgtc 25093502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 213 - 251
Target Start/End: Complemental strand, 28098181 - 28098143
Alignment:
Q  213 aattacactaaattatgtgattttctaaaattattaacg 251  Q
    |||||| ||||||||||||||||||||||||||| ||||    
T  28098181 aattaccctaaattatgtgattttctaaaattatcaacg 28098143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 206 - 248
Target Start/End: Original strand, 48202278 - 48202320
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaattatta 248  Q
    |||||||||||||| |||||||||||||||||| ||| |||||    
T  48202278 cacatataattacattaaattatgtgattttctcaaactatta 48202320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 257
Target Start/End: Complemental strand, 1509583 - 1509538
Alignment:
Q  212 taattacactaaattatgtgattttctaaaattattaacggtgtca 257  Q
    ||||||||||||||||||||||||| | ||||||||| | ||||||    
T  1509583 taattacactaaattatgtgattttttcaaattattagctgtgtca 1509538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 208 - 257
Target Start/End: Complemental strand, 9624689 - 9624640
Alignment:
Q  208 catataattacactaaattatgtgattttctaaaattattaacggtgtca 257  Q
    |||||||||||| | |||||||||||||||| ||||||||| | ||||||    
T  9624689 catataattacattgaattatgtgattttctcaaattattagcagtgtca 9624640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 251
Target Start/End: Complemental strand, 11658865 - 11658820
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaattattaacg 251  Q
    |||||||||| ||||| ||||||| |||||||| ||||||||||||    
T  11658865 cacatataatcacactgaattatgcgattttctcaaattattaacg 11658820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 248
Target Start/End: Complemental strand, 12704056 - 12704015
Alignment:
Q  207 acatataattacactaaattatgtgattttctaaaattatta 248  Q
    ||||||||||||||| ||||||||| |||||| |||||||||    
T  12704056 acatataattacactgaattatgtgcttttctcaaattatta 12704015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 248
Target Start/End: Original strand, 17005594 - 17005670
Alignment:
Q  174 acacgtgttgtgtccaacaccgacacaacacccaca--tataattacactaaattatgtgattttctaaaattatta 248  Q
    ||||||||| ||||  ||||| |||||||||| |||  |||||||||||| |||||| ||||||| | |||||||||    
T  17005594 acacgtgttatgtctgacaccaacacaacaccgacacttataattacactgaattatatgattttatcaaattatta 17005670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 206 - 246
Target Start/End: Original strand, 8789559 - 8789599
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaattat 246  Q
    |||||||||||||||  |||||||||||||||| |||||||    
T  8789559 cacatataattacacggaattatgtgattttctcaaattat 8789599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 248
Target Start/End: Original strand, 11493372 - 11493412
Alignment:
Q  208 catataattacactaaattatgtgattttctaaaattatta 248  Q
    |||||||||||||| |||||||||||||||| | |||||||    
T  11493372 catataattacactgaattatgtgattttctcacattatta 11493412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 206 - 242
Target Start/End: Complemental strand, 35222988 - 35222952
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaa 242  Q
    |||||||||||||| | ||||||||||||||||||||    
T  35222988 cacatataattacattgaattatgtgattttctaaaa 35222952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 212 - 248
Target Start/End: Complemental strand, 55401119 - 55401083
Alignment:
Q  212 taattacactaaattatgtgattttctaaaattatta 248  Q
    ||||||||||||||||||||||||| | |||||||||    
T  55401119 taattacactaaattatgtgattttttcaaattatta 55401083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 46; Significance: 3e-17; HSPs: 60)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 174 - 248
Target Start/End: Original strand, 12713302 - 12713378
Alignment:
Q  174 acacgtgttgtgtccaacaccgacacaacaccca--catataattacactaaattatgtgattttctaaaattatta 248  Q
    ||||||||||||| | ||||||||| |||||| |  ||||||||||||||||||||||||||||||| |||||||||    
T  12713302 acacgtgttgtgtacgacaccgacataacaccaatacatataattacactaaattatgtgattttcttaaattatta 12713378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 174 - 248
Target Start/End: Original strand, 12717393 - 12717469
Alignment:
Q  174 acacgtgttgtgtccaacaccgacacaacaccca--catataattacactaaattatgtgattttctaaaattatta 248  Q
    ||||||||||||| | ||||||||| |||||| |  ||||||||||||||||||||||||||||||| |||||||||    
T  12717393 acacgtgttgtgtacgacaccgacataacaccaatacatataattacactaaattatgtgattttcttaaattatta 12717469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 206 - 256
Target Start/End: Original strand, 39953155 - 39953205
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 256  Q
    |||||| |||||||||||||||||||||||||||||||||||| |||||||    
T  39953155 cacatacaattacactaaattatgtgattttctaaaattattagcggtgtc 39953205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 209 - 256
Target Start/End: Original strand, 34257922 - 34257969
Alignment:
Q  209 atataattacactaaattatgtgattttctaaaattattaacggtgtc 256  Q
    |||||||||||||||||||||||||||| | |||||||||||||||||    
T  34257922 atataattacactaaattatgtgattttattaaattattaacggtgtc 34257969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 178 - 246
Target Start/End: Complemental strand, 44482310 - 44482240
Alignment:
Q  178 gtgttgtgtccaacaccgacacaacacc--cacatataattacactaaattatgtgattttctaaaattat 246  Q
    |||| |||||| |||||||||| |||||  |||||||||||||||| |||||||||||||||| |||||||    
T  44482310 gtgtcgtgtccgacaccgacacgacaccgacacatataattacactgaattatgtgattttctcaaattat 44482240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 206 - 256
Target Start/End: Original strand, 1864889 - 1864939
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 256  Q
    |||||||||||||||| |||||||||||||||| ||||||||||| |||||    
T  1864889 cacatataattacactgaattatgtgattttctcaaattattaactgtgtc 1864939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 174 - 248
Target Start/End: Original strand, 12707848 - 12707924
Alignment:
Q  174 acacgtgttgtgtccaacaccgacacaacaccca--catataattacactaaattatgtgattttctaaaattatta 248  Q
    ||||||||||||| | ||||||||| |||||| |  ||||||||| ||||||||||| ||||||||| |||||||||    
T  12707848 acacgtgttgtgtacgacaccgacataacaccaatacatataattgcactaaattatatgattttcttaaattatta 12707924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 207 - 248
Target Start/End: Original strand, 14332652 - 14332693
Alignment:
Q  207 acatataattacactaaattatgtgattttctaaaattatta 248  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  14332652 acatataattacactaaattatgtgattttctcaaattatta 14332693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 210 - 259
Target Start/End: Complemental strand, 25272528 - 25272479
Alignment:
Q  210 tataattacactaaattatgtgattttctaaaattattaacggtgtcaaa 259  Q
    ||||||||||||||||||||||||||||| ||||| ||||| ||||||||    
T  25272528 tataattacactaaattatgtgattttctcaaattgttaactgtgtcaaa 25272479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 179 - 256
Target Start/End: Complemental strand, 17754390 - 17754311
Alignment:
Q  179 tgttgtgtccaacaccgacacaacac--ccacatataattacactaaattatgtgattttctaaaattattaacggtgtc 256  Q
    ||||||||||||||||||||| ||||   |||||||| ||||||| |||||||| ||||| | ||||||||| |||||||    
T  17754390 tgttgtgtccaacaccgacaccacactgacacatatagttacactgaattatgtaattttttcaaattattagcggtgtc 17754311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 206 - 249
Target Start/End: Original strand, 39130776 - 39130819
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaattattaa 249  Q
    ||||||||||||||||||||||| | ||||||||||||||||||    
T  39130776 cacatataattacactaaattatataattttctaaaattattaa 39130819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 206 - 256
Target Start/End: Complemental strand, 2784606 - 2784556
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 256  Q
    |||||||||||| ||| |||||||||||||||| ||||| |||||||||||    
T  2784606 cacatataattatactcaattatgtgattttcttaaatttttaacggtgtc 2784556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 206 - 248
Target Start/End: Original strand, 7918220 - 7918262
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaattatta 248  Q
    |||||||||||||||| |||||||||||||||| |||||||||    
T  7918220 cacatataattacactgaattatgtgattttctcaaattatta 7918262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 206 - 256
Target Start/End: Complemental strand, 13997933 - 13997883
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 256  Q
    |||||||||||||||| |||||||||||||| | |||| ||||||||||||    
T  13997933 cacatataattacactgaattatgtgatttttttaaataattaacggtgtc 13997883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 206 - 256
Target Start/End: Original strand, 25098564 - 25098614
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 256  Q
    |||||||||||||||| |||||||||||||||| ||||||| | |||||||    
T  25098564 cacatataattacactgaattatgtgattttctcaaattatcagcggtgtc 25098614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 183 - 246
Target Start/End: Complemental strand, 25361961 - 25361896
Alignment:
Q  183 gtgtccaacaccgacacaacacc--cacatataattacactaaattatgtgattttctaaaattat 246  Q
    |||||| |||||||||| ||||   |||||||||||||||| |||||||||||||||| |||||||    
T  25361961 gtgtccgacaccgacacgacactgacacatataattacactgaattatgtgattttctcaaattat 25361896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 256
Target Start/End: Original strand, 26238091 - 26238171
Alignment:
Q  174 acacgtgttgtgtccaacaccgacacaacacccacatataattacactaaattatgtgattttctaaaattattaacggtgtc 256  Q
    ||||||||||||||| |||||||||| ||   ||||||| |||||||| |||||||| ||||||| ||||||||| |||||||    
T  26238091 acacgtgttgtgtccgacaccgacac-actgacacatat-attacactgaattatgttattttctcaaattattagcggtgtc 26238171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 257
Target Start/End: Complemental strand, 34371797 - 34371713
Alignment:
Q  174 acacgtgttgtgtccaacaccgacacaacacc--cacatataattacactaaattatgtgattttctaaaattattaacggtgtca 257  Q
    |||||||| || ||| ||||| |||| |||||  |||||||||||||||| ||||||||||||||||  |||||||| ||||||||    
T  34371797 acacgtgtcgtatccgacaccaacacgacaccgacacatataattacactgaattatgtgattttct-caattattagcggtgtca 34371713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 206 - 248
Target Start/End: Original strand, 34712392 - 34712434
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaattatta 248  Q
    ||||||||||||||||||||||||| ||||||| |||||||||    
T  34712392 cacatataattacactaaattatgttattttctcaaattatta 34712434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 210 - 256
Target Start/End: Complemental strand, 36878507 - 36878461
Alignment:
Q  210 tataattacactaaattatgtgattttctaaaattattaacggtgtc 256  Q
    |||||||||||| |||||||||||||||| ||||||||| |||||||    
T  36878507 tataattacactgaattatgtgattttctcaaattattagcggtgtc 36878461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 206 - 255
Target Start/End: Complemental strand, 6427400 - 6427351
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaattattaacggtgt 255  Q
    |||||||||||||| | |||||||||||||||| ||||||||| ||||||    
T  6427400 cacatataattacattgaattatgtgattttctcaaattattagcggtgt 6427351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 174 - 248
Target Start/End: Original strand, 16164290 - 16164366
Alignment:
Q  174 acacgtgttgtgtccaacaccgacacaacacc--cacatataattacactaaattatgtgattttctaaaattatta 248  Q
    |||||||||| |||||||||| |||| |||    |||||||||||||| |||||||||||||||| | |||||||||    
T  16164290 acacgtgttgcgtccaacaccaacacgacaatgacacatataattacattaaattatgtgattttttcaaattatta 16164366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 207 - 248
Target Start/End: Complemental strand, 40181920 - 40181879
Alignment:
Q  207 acatataattacactaaattatgtgattttctaaaattatta 248  Q
    ||||||||||||||| |||||||||||||||| |||||||||    
T  40181920 acatataattacactgaattatgtgattttctcaaattatta 40181879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 206 - 246
Target Start/End: Complemental strand, 19324612 - 19324572
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaattat 246  Q
    |||||||||||||||| |||||||||||||||| |||||||    
T  19324612 cacatataattacactgaattatgtgattttctcaaattat 19324572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 206 - 242
Target Start/End: Complemental strand, 30749890 - 30749854
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaa 242  Q
    |||||||||||||||| ||||||||||||||||||||    
T  30749890 cacatataattacactgaattatgtgattttctaaaa 30749854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 206 - 242
Target Start/End: Complemental strand, 30771341 - 30771305
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaa 242  Q
    |||||||||||||||| ||||||||||||||||||||    
T  30771341 cacatataattacactgaattatgtgattttctaaaa 30771305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 256
Target Start/End: Original strand, 41877485 - 41877529
Alignment:
Q  212 taattacactaaattatgtgattttctaaaattattaacggtgtc 256  Q
    ||||||||||||||||||| ||||||| ||||||||| |||||||    
T  41877485 taattacactaaattatgtaattttctcaaattattagcggtgtc 41877529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 248
Target Start/End: Original strand, 42004937 - 42004998
Alignment:
Q  183 gtgtccaacaccgacacaacacccacatataattacactaaattatgtgattttctaaaattatta 248  Q
    |||||| ||||||||||||||||    ||| ||||||||||||||||| ||||||| |||||||||    
T  42004937 gtgtccgacaccgacacaacacc----tatgattacactaaattatgtcattttctcaaattatta 42004998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 272
Target Start/End: Original strand, 48148049 - 48148112
Alignment:
Q  209 atataattacactaaattatgtga-ttttctaaaattattaacggtgtcaaacatgtcagtatct 272  Q
    ||||||||||||| |||||| ||| |||| ||||||||||| ||||||| |||||||||||||||    
T  48148049 atataattacactgaattatatgatttttttaaaattattagcggtgtc-aacatgtcagtatct 48148112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 183 - 255
Target Start/End: Complemental strand, 36906072 - 36905998
Alignment:
Q  183 gtgtccaacaccgacacaacacc--cacatataattacactaaattatgtgattttctaaaattattaacggtgt 255  Q
    |||||| |||| |||||||| ||  ||||||||||||| || |||||||||||||||| | ||||||| ||||||    
T  36906072 gtgtccgacactgacacaacgccaacacatataattactctgaattatgtgattttctcagattattagcggtgt 36905998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 206 - 253
Target Start/End: Complemental strand, 52903299 - 52903252
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaattattaacggt 253  Q
    |||||||||||||||| |||||| ||||||| | ||||||||||||||    
T  52903299 cacatataattacactgaattatatgattttattaaattattaacggt 52903252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 210 - 256
Target Start/End: Original strand, 398778 - 398824
Alignment:
Q  210 tataattacactaaattatgtgattttctaaaattattaacggtgtc 256  Q
    |||||||||||| |||||||||||||| | ||||||||| |||||||    
T  398778 tataattacactgaattatgtgattttttcaaattattagcggtgtc 398824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 206 - 248
Target Start/End: Complemental strand, 10233303 - 10233261
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaattatta 248  Q
    |||||||||||||||| |||||||||||||||| || ||||||    
T  10233303 cacatataattacactgaattatgtgattttctcaatttatta 10233261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 206 - 248
Target Start/End: Original strand, 12443469 - 12443511
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaattatta 248  Q
    |||||| ||||||||| |||||||||||||||| |||||||||    
T  12443469 cacatacaattacactgaattatgtgattttctcaaattatta 12443511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 206 - 248
Target Start/End: Complemental strand, 13436508 - 13436466
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaattatta 248  Q
    |||||||||||||||| ||||||||||||| || |||||||||    
T  13436508 cacatataattacactgaattatgtgatttccttaaattatta 13436466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 206 - 256
Target Start/End: Original strand, 17425102 - 17425152
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 256  Q
    |||||||||||||| | |||||||||||||| | ||||||||| |||||||    
T  17425102 cacatataattacattgaattatgtgattttatcaaattattatcggtgtc 17425152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 206 - 256
Target Start/End: Original strand, 17831540 - 17831590
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 256  Q
    ||||||| |||||||| ||| |||||||||||| ||||||||| |||||||    
T  17831540 cacatatgattacactgaataatgtgattttctcaaattattagcggtgtc 17831590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 206 - 256
Target Start/End: Original strand, 20157359 - 20157409
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 256  Q
    ||||||| |||||||| |||||||||||||||| | ||||||| |||||||    
T  20157359 cacatatgattacactgaattatgtgattttctcacattattagcggtgtc 20157409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 210 - 256
Target Start/End: Complemental strand, 21530735 - 21530689
Alignment:
Q  210 tataattacactaaattatgtgattttctaaaattattaacggtgtc 256  Q
    |||||||| || ||||||| ||||||||| |||||||||||||||||    
T  21530735 tataattataccaaattatatgattttctcaaattattaacggtgtc 21530689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 209 - 255
Target Start/End: Complemental strand, 28674847 - 28674801
Alignment:
Q  209 atataattacactaaattatgtgattttctaaaattattaacggtgt 255  Q
    ||||||||| ||| |||||||| ||||||| ||||||||||||||||    
T  28674847 atataattatactgaattatgtaattttctcaaattattaacggtgt 28674801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 206 - 256
Target Start/End: Original strand, 32724107 - 32724157
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 256  Q
    |||||||||||||| |||||||||| | ||||| |||||||||||| ||||    
T  32724107 cacatataattacattaaattatgtaaatttctcaaattattaacgatgtc 32724157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 210 - 248
Target Start/End: Complemental strand, 34298482 - 34298444
Alignment:
Q  210 tataattacactaaattatgtgattttctaaaattatta 248  Q
    |||||||||||| |||||||||||||||| |||||||||    
T  34298482 tataattacactgaattatgtgattttctcaaattatta 34298444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 206 - 248
Target Start/End: Original strand, 35999331 - 35999373
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaattatta 248  Q
    |||||||||||| |||||||||| ||||||||| |||||||||    
T  35999331 cacatataattatactaaattatatgattttcttaaattatta 35999373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 206 - 256
Target Start/End: Complemental strand, 38503370 - 38503320
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 256  Q
    |||||||||||||||| || ||| ||||||||| ||||||||| |||||||    
T  38503370 cacatataattacactgaaatatatgattttctcaaattattagcggtgtc 38503320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 255
Target Start/End: Complemental strand, 9709870 - 9709821
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaattattaacggtgt 255  Q
    ||||||||||||||   |||||||||||||||| ||||||||| ||||||    
T  9709870 cacatataattacaacgaattatgtgattttctcaaattattagcggtgt 9709821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 248
Target Start/End: Complemental strand, 9828128 - 9828052
Alignment:
Q  174 acacgtgttgtgtccaacaccgacacaacacc--cacatataattacactaaattatgtgattttctaaaattatta 248  Q
    |||||||| |||||  |||| ||||| |||||  |||||| ||||||||| |||||||||||||| | |||||||||    
T  9828128 acacgtgtcgtgtctgacacggacacgacaccgacacataaaattacactgaattatgtgattttatcaaattatta 9828052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 248
Target Start/End: Original strand, 10572580 - 10572640
Alignment:
Q  190 acaccgacacaacacc--cacatataattacactaaattatgtgattttctaaaattatta 248  Q
    ||||| ||||||||||  ||||| |||||||||  |||||||||||||||| |||||||||    
T  10572580 acaccaacacaacaccgacacatttaattacaccgaattatgtgattttctcaaattatta 10572640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 250
Target Start/End: Complemental strand, 15323206 - 15323169
Alignment:
Q  213 aattacactaaattatgtgattttctaaaattattaac 250  Q
    |||||||||||||||||||||||| | |||||||||||    
T  15323206 aattacactaaattatgtgattttttcaaattattaac 15323169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 246
Target Start/End: Original strand, 20131987 - 20132024
Alignment:
Q  209 atataattacactaaattatgtgattttctaaaattat 246  Q
    |||||||||| ||||||||||||||||||| |||||||    
T  20131987 atataattaccctaaattatgtgattttctcaaattat 20132024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 248
Target Start/End: Original strand, 32461439 - 32461514
Alignment:
Q  174 acacgtgttgtgtccaacaccgacacaacacccaca--tataattacactaaattatgtgattttctaaaattatta 248  Q
    |||||||| |||||| ||||||||||| |||| |||  | |||||||| |||||||||||||||| | |||||||||    
T  32461439 acacgtgtcgtgtccgacaccgacaca-caccaacacttgtaattacattaaattatgtgattttttcaaattatta 32461514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 242
Target Start/End: Original strand, 45534202 - 45534235
Alignment:
Q  209 atataattacactaaattatgtgattttctaaaa 242  Q
    ||||| ||||||||||||||||||||||||||||    
T  45534202 atatacttacactaaattatgtgattttctaaaa 45534235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 248
Target Start/End: Complemental strand, 47989577 - 47989505
Alignment:
Q  178 gtgttgtgtccaacaccgacacaacacccaca--tataattacactaaattatgtgattttctaaaattatta 248  Q
    |||| |||||| |||||||||| ||||| |||  | |||||||||| |||||||||||||| | |||||||||    
T  47989577 gtgtcgtgtccgacaccgacacgacaccgacacttgtaattacactgaattatgtgatttttttaaattatta 47989505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 216 - 256
Target Start/End: Original strand, 2896140 - 2896180
Alignment:
Q  216 tacactaaattatgtgattttctaaaattattaacggtgtc 256  Q
    |||||| |||||||||||||||| ||||||||| |||||||    
T  2896140 tacactgaattatgtgattttctcaaattattagcggtgtc 2896180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 256
Target Start/End: Original strand, 5898277 - 5898325
Alignment:
Q  208 catataattacactaaattatgtgattttctaaaattattaacggtgtc 256  Q
    |||||||||||||| |||||||||||||| | | ||||||| |||||||    
T  5898277 catataattacactgaattatgtgattttttcagattattagcggtgtc 5898325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 212 - 248
Target Start/End: Original strand, 22515902 - 22515938
Alignment:
Q  212 taattacactaaattatgtgattttctaaaattatta 248  Q
    ||||||||||||||||||||||||| | |||||||||    
T  22515902 taattacactaaattatgtgattttttcaaattatta 22515938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 212 - 248
Target Start/End: Original strand, 22881631 - 22881667
Alignment:
Q  212 taattacactaaattatgtgattttctaaaattatta 248  Q
    ||||||||||||||||||||||||| | |||||||||    
T  22881631 taattacactaaattatgtgattttttcaaattatta 22881667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 174 - 239
Target Start/End: Complemental strand, 25934700 - 25934633
Alignment:
Q  174 acacgtgttgtgtccaacaccgacacaacacc--cacatataattacactaaattatgtgattttcta 239  Q
    |||||||| |||||| |||||||||| | |||  ||||||||||||||||  ||| ||||||||||||    
T  25934700 acacgtgtcgtgtccgacaccgacacgataccgacacatataattacactgtattttgtgattttcta 25934633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 206 - 257
Target Start/End: Complemental strand, 29229512 - 29229460
Alignment:
Q  206 cacatataattac-actaaattatgtgattttctaaaattattaacggtgtca 257  Q
    ||||||||||||| ||||||| |||||||||||| ||||||||| | ||||||    
T  29229512 cacatataattaccactaaatcatgtgattttctcaaattattagcagtgtca 29229460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 212 - 248
Target Start/End: Complemental strand, 31015087 - 31015051
Alignment:
Q  212 taattacactaaattatgtgattttctaaaattatta 248  Q
    |||||||||| |||||||||||||||| |||||||||    
T  31015087 taattacactgaattatgtgattttctcaaattatta 31015051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 212 - 248
Target Start/End: Original strand, 37055871 - 37055907
Alignment:
Q  212 taattacactaaattatgtgattttctaaaattatta 248  Q
    ||||||||||||||||||| ||||||| |||||||||    
T  37055871 taattacactaaattatgtaattttctcaaattatta 37055907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 45; Significance: 1e-16; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 184 - 256
Target Start/End: Original strand, 29787356 - 29787428
Alignment:
Q  184 tgtccaacaccgacacaacacccacatataattacactaaattatgtgattttctaaaattattaacggtgtc 256  Q
    |||||||||||||||  ||||| ||| ||||||||||| |||||||||||||||| ||||||||| |||||||    
T  29787356 tgtccaacaccgacattacaccaacacataattacactgaattatgtgattttctcaaattattagcggtgtc 29787428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 178 - 248
Target Start/End: Complemental strand, 15902902 - 15902830
Alignment:
Q  178 gtgttgtgtccaacaccgacacaacacc--cacatataattacactaaattatgtgattttctaaaattatta 248  Q
    |||| |||||| | ||||||||||||||  ||||||||||||||||||||||||||||||| | |||||||||    
T  15902902 gtgtcgtgtccgataccgacacaacaccgacacatataattacactaaattatgtgattttatcaaattatta 15902830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 178 - 256
Target Start/End: Complemental strand, 32308200 - 32308120
Alignment:
Q  178 gtgttgtgtccaacaccgacacaacacc--cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 256  Q
    |||| ||||||||||||||||| ||||   |||||| ||||||||| |||||||||||||||| ||||||||| |||||||    
T  32308200 gtgtcgtgtccaacaccgacacgacactgacacatacaattacactgaattatgtgattttctcaaattattagcggtgtc 32308120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 208 - 256
Target Start/End: Original strand, 27093424 - 27093472
Alignment:
Q  208 catataattacactaaattatgtgattttctaaaattattaacggtgtc 256  Q
    ||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  27093424 catataattacactaaattatgtgattttcttaaattattagcggtgtc 27093472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 208 - 256
Target Start/End: Complemental strand, 27184877 - 27184829
Alignment:
Q  208 catataattacactaaattatgtgattttctaaaattattaacggtgtc 256  Q
    ||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  27184877 catataattacactaaattatgtgattttcttaaattattagcggtgtc 27184829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 206 - 257
Target Start/End: Complemental strand, 8160466 - 8160415
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaattattaacggtgtca 257  Q
    ||||||||||||||||||||||||| ||||||| ||||||||| ||||||||    
T  8160466 cacatataattacactaaattatgtaattttcttaaattattagcggtgtca 8160415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 182 - 257
Target Start/End: Complemental strand, 11700877 - 11700802
Alignment:
Q  182 tgtgtccaacaccgacacaacacccacatataattacactaaattatgtgattttctaaaattattaacggtgtca 257  Q
    ||||||| ||||||| |||||||  ||| ||||||||| | |||||||||||||| | ||||||||||||||||||    
T  11700877 tgtgtccgacaccgagacaacacagacacataattacattgaattatgtgattttgtcaaattattaacggtgtca 11700802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 206 - 253
Target Start/End: Complemental strand, 17851481 - 17851434
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaattattaacggt 253  Q
    |||||||||||||||| |||||||||||||||||||||||||| ||||    
T  17851481 cacatataattacactgaattatgtgattttctaaaattattagcggt 17851434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 206 - 256
Target Start/End: Complemental strand, 1433504 - 1433454
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 256  Q
    ||||||||||||||| |||| |||||||||||| |||||||||||||||||    
T  1433504 cacatataattacaccaaatgatgtgattttctcaaattattaacggtgtc 1433454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 206 - 256
Target Start/End: Complemental strand, 2948733 - 2948683
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 256  Q
    |||||||||||||||||||||| |||||||||||||||||| | |||||||    
T  2948733 cacatataattacactaaattacgtgattttctaaaattatcagcggtgtc 2948683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 195 - 250
Target Start/End: Complemental strand, 5233692 - 5233635
Alignment:
Q  195 gacacaacacc--cacatataattacactaaattatgtgattttctaaaattattaac 250  Q
    |||||||||||  ||||||||||||||||| ||||||||||||||| |||||||||||    
T  5233692 gacacaacaccaacacatataattacactagattatgtgattttctcaaattattaac 5233635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 206 - 242
Target Start/End: Original strand, 18213042 - 18213078
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaa 242  Q
    |||||||||||||||||||||||||||||||||||||    
T  18213042 cacatataattacactaaattatgtgattttctaaaa 18213078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 206 - 258
Target Start/End: Original strand, 27732248 - 27732300
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaattattaacggtgtcaa 258  Q
    |||||||||||||||| |||||||| ||||||| |||||||||||| ||||||    
T  27732248 cacatataattacactgaattatgtaattttcttaaattattaacgttgtcaa 27732300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 206 - 248
Target Start/End: Complemental strand, 3721143 - 3721101
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaattatta 248  Q
    |||||||||||| |||||||||||||||||||| |||||||||    
T  3721143 cacatataattatactaaattatgtgattttctcaaattatta 3721101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 206 - 248
Target Start/End: Original strand, 7328700 - 7328742
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaattatta 248  Q
    ||||||||||||||||||||||||| ||||||| |||||||||    
T  7328700 cacatataattacactaaattatgttattttctcaaattatta 7328742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 206 - 248
Target Start/End: Complemental strand, 16341546 - 16341504
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaattatta 248  Q
    |||||||||||||||| |||||||||||||||| |||||||||    
T  16341546 cacatataattacacttaattatgtgattttctcaaattatta 16341504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 206 - 256
Target Start/End: Complemental strand, 20549841 - 20549791
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 256  Q
    |||||||||||||||| ||||| |||||||||| ||||||||| |||||||    
T  20549841 cacatataattacactgaattacgtgattttctcaaattattagcggtgtc 20549791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 206 - 256
Target Start/End: Original strand, 22602719 - 22602769
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 256  Q
    |||||||||||||||| |||||||||||||||| |||| ||| ||||||||    
T  22602719 cacatataattacactgaattatgtgattttctcaaataatttacggtgtc 22602769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 206 - 256
Target Start/End: Original strand, 33384591 - 33384641
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 256  Q
    |||||||||||||||||||||||  |||||||| | |||||||||||||||    
T  33384591 cacatataattacactaaattataggattttctcagattattaacggtgtc 33384641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 172 - 256
Target Start/End: Complemental strand, 49088892 - 49088810
Alignment:
Q  172 aaacacgtgttgtgtccaacaccgacacaacacccacatataattacactaaattat--gtgattttctaaaattattaacggtgtc 256  Q
    ||||||||||||||| ||||||| |||| |    |||||||||||| ||||||||||  |||||||| | |||||||||||||||||    
T  49088892 aaacacgtgttgtgttcaacaccaacacga----cacatataattatactaaattatacgtgatttttttaaattattaacggtgtc 49088810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 174 - 256
Target Start/End: Original strand, 26329357 - 26329441
Alignment:
Q  174 acacgtgttgtgtccaacaccgacacaacacc--cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 256  Q
    |||||||| |||||  |||||||||| || ||  |||||||||||||||| |||| |||| |||||| |||||||||||| ||||    
T  26329357 acacgtgtcgtgtctgacaccgacacgacgccgacacatataattacactgaattgtgtgtttttctcaaattattaacgatgtc 26329441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 206 - 254
Target Start/End: Original strand, 2425742 - 2425790
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaattattaacggtg 254  Q
    |||||||| || |||| |||||||||||||||| |||||||||||||||    
T  2425742 cacatatagttccacttaattatgtgattttctcaaattattaacggtg 2425790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 248
Target Start/End: Original strand, 6630888 - 6630963
Alignment:
Q  175 cacgtgttgtgtccaacaccgacacaacacc--cacatataattacactaaattatgtgattttctaaaattatta 248  Q
    |||||||||||||| ||||| |||| ||| |  |||||||||||||||| ||||| |||| ||||| |||||||||    
T  6630888 cacgtgttgtgtccgacaccaacacgacatcgacacatataattacactgaattaagtgactttctcaaattatta 6630963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 206 - 258
Target Start/End: Original strand, 42720899 - 42720951
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaattattaacggtgtcaa 258  Q
    |||||||||||||| | |||||||||||||| | ||||||||| |||||||||    
T  42720899 cacatataattacatttaattatgtgattttttcaaattattagcggtgtcaa 42720951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 209 - 256
Target Start/End: Complemental strand, 5236033 - 5235986
Alignment:
Q  209 atataattacactaaattatgtgattttctaaaattattaacggtgtc 256  Q
    |||||||||||||||||||| | ||||||| ||||||||| |||||||    
T  5236033 atataattacactaaattatataattttcttaaattattagcggtgtc 5235986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 176 - 248
Target Start/End: Complemental strand, 24339724 - 24339650
Alignment:
Q  176 acgtgttgtgtccaacaccgacacaacacccaca--tataattacactaaattatgtgattttctaaaattatta 248  Q
    |||||| |||||| |||||||||| ||||| |||  | |||||||||| |||||||||||||| | |||||||||    
T  24339724 acgtgtcgtgtccgacaccgacacgacaccgacacttgtaattacactgaattatgtgattttttcaaattatta 24339650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 206 - 249
Target Start/End: Complemental strand, 38143273 - 38143230
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaattattaa 249  Q
    |||||||||||||| |||||||||||||||| | ||||||||||    
T  38143273 cacatataattacattaaattatgtgattttttcaaattattaa 38143230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 206 - 256
Target Start/End: Complemental strand, 5548726 - 5548676
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 256  Q
    |||||||||||||||| |||||| ||||||||| ||||||| | |||||||    
T  5548726 cacatataattacactgaattatttgattttctcaaattatcagcggtgtc 5548676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 206 - 248
Target Start/End: Complemental strand, 12278885 - 12278843
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaattatta 248  Q
    |||||||||||||||| |||||||| ||||||| |||||||||    
T  12278885 cacatataattacactgaattatgtcattttcttaaattatta 12278843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 206 - 256
Target Start/End: Complemental strand, 19206100 - 19206050
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 256  Q
    |||||||||||| | | |||||||||||||||| ||||||||| |||||||    
T  19206100 cacatataattataatgaattatgtgattttctcaaattattagcggtgtc 19206050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 206 - 256
Target Start/End: Complemental strand, 22484075 - 22484025
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 256  Q
    |||||||||||| ||| |||||||  ||||||||||||||||| |||||||    
T  22484075 cacatataattatactgaattatgcaattttctaaaattattagcggtgtc 22484025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 206 - 248
Target Start/End: Complemental strand, 22868092 - 22868050
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaattatta 248  Q
    |||||||||||||||| |||||||||||||||| | |||||||    
T  22868092 cacatataattacactgaattatgtgattttctcatattatta 22868050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 206 - 248
Target Start/End: Complemental strand, 24146866 - 24146824
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaattatta 248  Q
    |||||||||||| | | ||||||||||||||||||||||||||    
T  24146866 cacatataattatattgaattatgtgattttctaaaattatta 24146824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 190 - 256
Target Start/End: Complemental strand, 30731103 - 30731037
Alignment:
Q  190 acaccgacacaacacccacatataattacactaaattatgtgattttctaaaattattaacggtgtc 256  Q
    ||||| |||| ||||| ||| | ||||||||| |||||||||||||||| ||||||||  |||||||    
T  30731103 acaccaacacgacaccgacacacaattacactgaattatgtgattttctcaaattattcgcggtgtc 30731037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 248
Target Start/End: Complemental strand, 2424659 - 2424622
Alignment:
Q  211 ataattacactaaattatgtgattttctaaaattatta 248  Q
    ||||||||||| |||||||||||||||| |||||||||    
T  2424659 ataattacactgaattatgtgattttctcaaattatta 2424622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 249
Target Start/End: Original strand, 9408349 - 9408386
Alignment:
Q  212 taattacactaaattatgtgattttctaaaattattaa 249  Q
    ||||||||||||||||||||||||| | ||||||||||    
T  9408349 taattacactaaattatgtgattttttcaaattattaa 9408386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 256
Target Start/End: Complemental strand, 23191945 - 23191896
Alignment:
Q  207 acatataattacactaaattatgtgattttctaaaattattaacggtgtc 256  Q
    |||| |||||||||| || ||||||||||||| ||||||||| |||||||    
T  23191945 acatgtaattacactgaaatatgtgattttctcaaattattagcggtgtc 23191896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 246
Target Start/End: Complemental strand, 35493460 - 35493423
Alignment:
Q  209 atataattacactaaattatgtgattttctaaaattat 246  Q
    |||||||||| ||||||||||||||||||| |||||||    
T  35493460 atataattaccctaaattatgtgattttctcaaattat 35493423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 242
Target Start/End: Complemental strand, 39138491 - 39138458
Alignment:
Q  209 atataattacactaaattatgtgattttctaaaa 242  Q
    ||||||||||||| ||||||||||||||||||||    
T  39138491 atataattacactgaattatgtgattttctaaaa 39138458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 206 - 246
Target Start/End: Complemental strand, 9482984 - 9482944
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaattat 246  Q
    |||||||||||||||| |||| ||||||||||| |||||||    
T  9482984 cacatataattacactgaattgtgtgattttctcaaattat 9482944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 256
Target Start/End: Complemental strand, 10377555 - 10377507
Alignment:
Q  208 catataattacactaaattatgtgattttctaaaattattaacggtgtc 256  Q
    |||||||||||||| |||||| ||||||||| | ||||||||| |||||    
T  10377555 catataattacactgaattatatgattttcttatattattaacagtgtc 10377507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 236
Target Start/End: Complemental strand, 41020544 - 41020516
Alignment:
Q  208 catataattacactaaattatgtgatttt 236  Q
    |||||||||||||||||||||||||||||    
T  41020544 catataattacactaaattatgtgatttt 41020516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 45; Significance: 1e-16; HSPs: 51)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 174 - 275
Target Start/End: Original strand, 25038046 - 25038148
Alignment:
Q  174 acacgtgttgtgtccaacaccgacacaacacccacatat--aattacactaaattatgtgattttctaaaattattaacggtgtcaaacatgtcagtatc 271  Q
    |||||||| |||||  ||||| |||||| ||| |||| |  |||||||||||||||||| ||||||| ||||||||||||||||| ||| ||||||||||    
T  25038046 acacgtgtcgtgtcggacaccaacacaataccgacatttgtaattacactaaattatgtaattttctcaaattattaacggtgtc-aacgtgtcagtatc 25038144  T
Q  272 tgtg 275  Q
    ||||    
T  25038145 tgtg 25038148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 206 - 256
Target Start/End: Original strand, 5732519 - 5732569
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 256  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||||||||    
T  5732519 cacatataattacactaaaatatgtgattttctcaaattattaacggtgtc 5732569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 206 - 248
Target Start/End: Complemental strand, 7086845 - 7086803
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaattatta 248  Q
    ||||||||||||||||||||||||||||||||| |||||||||    
T  7086845 cacatataattacactaaattatgtgattttctcaaattatta 7086803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 206 - 256
Target Start/End: Complemental strand, 19040402 - 19040352
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 256  Q
    |||||||||||||||| |||||||||||||||| ||||||||| |||||||    
T  19040402 cacatataattacactgaattatgtgattttctcaaattattagcggtgtc 19040352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 201 - 255
Target Start/End: Original strand, 31579229 - 31579283
Alignment:
Q  201 acacccacatataattacactaaattatgtgattttctaaaattattaacggtgt 255  Q
    ||||| ||| ||||||||||| |||||||||||||||| ||||||||||||||||    
T  31579229 acaccgacacataattacactgaattatgtgattttctcaaattattaacggtgt 31579283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 178 - 256
Target Start/End: Original strand, 5970087 - 5970167
Alignment:
Q  178 gtgttgtgtccaacaccgacacaacacccacatat--aattacactaaattatgtgattttctaaaattattaacggtgtc 256  Q
    |||| |||||| |||||||||| |||||||||| |  ||||||||| |||||||||||||| | ||||||||||| |||||    
T  5970087 gtgtcgtgtccgacaccgacacgacacccacatttgtaattacactgaattatgtgattttttcaaattattaactgtgtc 5970167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 206 - 255
Target Start/End: Original strand, 7265602 - 7265651
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaattattaacggtgt 255  Q
    |||||||||||||||| |||||||||||||||| ||||||||| ||||||    
T  7265602 cacatataattacactgaattatgtgattttctcaaattattagcggtgt 7265651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 195 - 248
Target Start/End: Original strand, 8805570 - 8805623
Alignment:
Q  195 gacacaacacccacatataattacactaaattatgtgattttctaaaattatta 248  Q
    ||||| ||||| ||| |||||||||||||||||||||||||||| |||||||||    
T  8805570 gacactacaccgacacataattacactaaattatgtgattttctcaaattatta 8805623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 174 - 248
Target Start/End: Complemental strand, 16766781 - 16766705
Alignment:
Q  174 acacgtgttgtgtccaacaccgacacaacacccaca--tataattacactaaattatgtgattttctaaaattatta 248  Q
    ||||||||||||||| |||||||||| ||||| |||  | |||||||||| |||||||||||||| | |||||||||    
T  16766781 acacgtgttgtgtccgacaccgacacgacaccgacacttgtaattacactgaattatgtgattttttcaaattatta 16766705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 209 - 257
Target Start/End: Complemental strand, 5462733 - 5462685
Alignment:
Q  209 atataattacactaaattatgtgattttctaaaattattaacggtgtca 257  Q
    ||||||||||| | |||||||||||||||| ||||||||||||||||||    
T  5462733 atataattacaatgaattatgtgattttctcaaattattaacggtgtca 5462685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 209 - 256
Target Start/End: Complemental strand, 9658926 - 9658879
Alignment:
Q  209 atataattacactaaattatgtgattttctaaaattattaacggtgtc 256  Q
    ||||||||||||| |||||||||||||||| ||||||||| |||||||    
T  9658926 atataattacactgaattatgtgattttcttaaattattagcggtgtc 9658879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 174 - 242
Target Start/End: Original strand, 16488565 - 16488635
Alignment:
Q  174 acacgtgttgtgtccaacaccgacacaacacc--cacatataattacactaaattatgtgattttctaaaa 242  Q
    |||||||| |||||| |||||||||| |||||  ||||||||||||||||  ||| |||||||||||||||    
T  16488565 acacgtgtcgtgtccgacaccgacacgacaccgacacatataattacactgcattttgtgattttctaaaa 16488635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 257
Target Start/End: Original strand, 32511679 - 32511726
Alignment:
Q  210 tataattacactaaattatgtgattttctaaaattattaacggtgtca 257  Q
    |||||||||||| |||||||||||||||| ||||||||| ||||||||    
T  32511679 tataattacactgaattatgtgattttcttaaattattagcggtgtca 32511726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 206 - 248
Target Start/End: Original strand, 9025503 - 9025545
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaattatta 248  Q
    |||||||||||||||| |||||||||||||||| |||||||||    
T  9025503 cacatataattacactgaattatgtgattttctcaaattatta 9025545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 206 - 248
Target Start/End: Original strand, 9195763 - 9195805
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaattatta 248  Q
    ||||||||||||||||||||||||| ||||||| |||||||||    
T  9195763 cacatataattacactaaattatgtcattttctcaaattatta 9195805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 206 - 256
Target Start/End: Complemental strand, 10842582 - 10842532
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 256  Q
    ||||||| ||||||||||||||||||||||| | ||||||||| |||||||    
T  10842582 cacatatgattacactaaattatgtgattttttcaaattattagcggtgtc 10842532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 206 - 256
Target Start/End: Original strand, 10888983 - 10889033
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 256  Q
    |||||||||| |||||||||||||||||||| | ||||||||| |||||||    
T  10888983 cacatataatcacactaaattatgtgattttatcaaattattagcggtgtc 10889033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 206 - 248
Target Start/End: Complemental strand, 17302397 - 17302355
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaattatta 248  Q
    ||||||||||||||| ||||||||||||||||| |||||||||    
T  17302397 cacatataattacacaaaattatgtgattttcttaaattatta 17302355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 210 - 256
Target Start/End: Original strand, 17341677 - 17341723
Alignment:
Q  210 tataattacactaaattatgtgattttctaaaattattaacggtgtc 256  Q
    |||||||||||| |||||||||||||| | |||||||||||||||||    
T  17341677 tataattacactgaattatgtgattttatcaaattattaacggtgtc 17341723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 174 - 248
Target Start/End: Complemental strand, 7248442 - 7248366
Alignment:
Q  174 acacgtgttgtgtccaacaccgacacaacacc--cacatataattacactaaattatgtgattttctaaaattatta 248  Q
    |||| ||||||||||||||||||||| || ||  ||||||||||||| || ||||||||||||| || | |||||||    
T  7248442 acacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaattatgtgatttcctcagattatta 7248366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 206 - 255
Target Start/End: Original strand, 30866153 - 30866202
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaattattaacggtgt 255  Q
    |||||||||||||| | |||||||||||||||| ||||||||| ||||||    
T  30866153 cacatataattacattgaattatgtgattttctcaaattattagcggtgt 30866202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 206 - 255
Target Start/End: Original strand, 32298616 - 32298665
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaattattaacggtgt 255  Q
    ||||||||||||||||||||||||||||  ||| ||||||||| ||||||    
T  32298616 cacatataattacactaaattatgtgatgatcttaaattattagcggtgt 32298665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 170 - 250
Target Start/End: Original strand, 4118304 - 4118386
Alignment:
Q  170 tcaaacacgtgttgtgtccaacaccgacacaacacccaca--tataattacactaaattatgtgattttctaaaattattaac 250  Q
    |||||||||| |||||||| |||| ||||||| ||| |||  | |||||||| | |||||||||||||| | |||||||||||    
T  4118304 tcaaacacgtattgtgtccgacactgacacaaaaccaacacttgtaattacatttaattatgtgattttttcaaattattaac 4118386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 206 - 253
Target Start/End: Complemental strand, 9617484 - 9617437
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaattattaacggt 253  Q
    |||||||||||||| | |||||||||||||||| ||||||||| ||||    
T  9617484 cacatataattacattgaattatgtgattttctcaaattattaccggt 9617437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 205 - 255
Target Start/End: Complemental strand, 1532291 - 1532241
Alignment:
Q  205 ccacatataattacactaaattatgtgattttctaaaattattaacggtgt 255  Q
    ||||||||||||||||| |||||||| ||||| | ||||||||| ||||||    
T  1532291 ccacatataattacactgaattatgtaattttatcaaattattagcggtgt 1532241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 206 - 248
Target Start/End: Complemental strand, 7151462 - 7151420
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaattatta 248  Q
    |||||||||||||||| |||||||||||||| | |||||||||    
T  7151462 cacatataattacacttaattatgtgattttttcaaattatta 7151420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 206 - 256
Target Start/End: Complemental strand, 7378029 - 7377979
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 256  Q
    |||||||||||||| | |||||||||||||||| ||||| ||| |||||||    
T  7378029 cacatataattacattgaattatgtgattttctcaaatttttagcggtgtc 7377979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 256
Target Start/End: Complemental strand, 8714060 - 8713979
Alignment:
Q  178 gtgttgtgtccaacaccgacacaacacccacatat--aattacactaaattatgtga-ttttctaaaattattaacggtgtc 256  Q
    |||| |||||| |||||||||| |||||||||| |  ||||||||| |||||||||| |||| | ||||||||||| |||||    
T  8714060 gtgtcgtgtccgacaccgacacgacacccacatttgtaattacactgaattatgtgatttttttcaaattattaactgtgtc 8713979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 206 - 256
Target Start/End: Complemental strand, 9027228 - 9027178
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 256  Q
    |||||||||||||||  |||||||||||| ||| ||||||||| |||||||    
T  9027228 cacatataattacacggaattatgtgattatctcaaattattagcggtgtc 9027178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 206 - 256
Target Start/End: Complemental strand, 9629433 - 9629383
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 256  Q
    |||||||||||||| | |||||||||||||||| ||||||||  |||||||    
T  9629433 cacatataattacattgaattatgtgattttctcaaattattggcggtgtc 9629383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 206 - 244
Target Start/End: Original strand, 11591879 - 11591917
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaatt 244  Q
    |||||||||||||||| |||||||||||||||| |||||    
T  11591879 cacatataattacactgaattatgtgattttctcaaatt 11591917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 207 - 245
Target Start/End: Original strand, 13360382 - 13360420
Alignment:
Q  207 acatataattacactaaattatgtgattttctaaaatta 245  Q
    ||||||||||||||| |||||||||||||||| ||||||    
T  13360382 acatataattacactgaattatgtgattttctcaaatta 13360420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 206 - 256
Target Start/End: Complemental strand, 13851786 - 13851736
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 256  Q
    |||||||||||||||| ||||| || ||||||| ||||||||| |||||||    
T  13851786 cacatataattacactgaattacgttattttctcaaattattagcggtgtc 13851736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 248
Target Start/End: Complemental strand, 17435324 - 17435207
Alignment:
Q  134 aagtacgg-cacttttcggattagacgtgcatcattatcaaacacgtgttgtgtccaacaccgacacaacacccaca--tataattacactaaattatgt 230  Q
    |||||||| |||||||| |||||||||||   || | || ||||||||| |||||| ||| ||||| |||||  |||  | |||||||||| ||||||||    
T  17435324 aagtacggacacttttcagattagacgtgtcccagtgtcgaacacgtgtcgtgtccgacatcgacaaaacactaacacttgtaattacactgaattatgt 17435225  T
Q  231 gattttctaaaattatta 248  Q
     ||||| |||||||||||    
T  17435224 aattttttaaaattatta 17435207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 206 - 248
Target Start/End: Complemental strand, 24832638 - 24832596
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaattatta 248  Q
    |||||||||||||||||||||||  |||||||| |||||||||    
T  24832638 cacatataattacactaaattataagattttctcaaattatta 24832596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 206 - 248
Target Start/End: Original strand, 26178690 - 26178732
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaattatta 248  Q
    ||||||| ||||||||||||||||||||||| | |||||||||    
T  26178690 cacatatgattacactaaattatgtgattttatcaaattatta 26178732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 206 - 244
Target Start/End: Complemental strand, 26562739 - 26562701
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaatt 244  Q
    |||||||||||||||| |||||||||||||||| |||||    
T  26562739 cacatataattacactgaattatgtgattttctcaaatt 26562701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 209 - 251
Target Start/End: Original strand, 32248937 - 32248979
Alignment:
Q  209 atataattacactaaattatgtgattttctaaaattattaacg 251  Q
    |||||||||| ||||||||||||||||| ||||||||| ||||    
T  32248937 atataattaccctaaattatgtgattttttaaaattatcaacg 32248979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 207 - 257
Target Start/End: Original strand, 32320679 - 32320729
Alignment:
Q  207 acatataattacactaaattatgtgattttctaaaattattaacggtgtca 257  Q
    ||||||||| ||| | |||||||||||||| | ||||||||||||||||||    
T  32320679 acatataatgacattgaattatgtgattttatcaaattattaacggtgtca 32320729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 213 - 255
Target Start/End: Original strand, 34447374 - 34447416
Alignment:
Q  213 aattacactaaattatgtgattttctaaaattattaacggtgt 255  Q
    |||||||||||||||| ||||||| | ||||||||||||||||    
T  34447374 aattacactaaattatatgattttatcaaattattaacggtgt 34447416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 248
Target Start/End: Complemental strand, 9522959 - 9522899
Alignment:
Q  190 acaccgacacaacacccaca--tataattacactaaattatgtgattttctaaaattatta 248  Q
    |||||||||||||||| |||  | |||||||||| |||||||||||||| | |||||||||    
T  9522959 acaccgacacaacaccgacacttgtaattacactgaattatgtgatttttttaaattatta 9522899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 248
Target Start/End: Original strand, 24833243 - 24833284
Alignment:
Q  207 acatataattacactaaattatgtgattttctaaaattatta 248  Q
    ||||||||||||||||||||||| |||||||| || ||||||    
T  24833243 acatataattacactaaattatgcgattttcttaacttatta 24833284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 248
Target Start/End: Original strand, 34073338 - 34073398
Alignment:
Q  190 acaccgacacaacacccac--atataattacactaaattatgtgattttctaaaattatta 248  Q
    |||||||||| ||||| ||  ||||||||||||| ||||||| |||||||| |||||||||    
T  34073338 acaccgacacgacaccgacccatataattacactgaattatgagattttctcaaattatta 34073398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 256
Target Start/End: Complemental strand, 677885 - 677837
Alignment:
Q  208 catataattacactaaattatgtgattttctaaaattattaacggtgtc 256  Q
    ||||||| ||||||| ||||| ||||||||| ||||||||||| |||||    
T  677885 catataaatacactatattatatgattttctcaaattattaacagtgtc 677837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 248
Target Start/End: Original strand, 7996389 - 7996429
Alignment:
Q  208 catataattacactaaattatgtgattttctaaaattatta 248  Q
    |||||||||||||| |||||| ||||||||| |||||||||    
T  7996389 catataattacactgaattatatgattttctcaaattatta 7996429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 248
Target Start/End: Complemental strand, 8022412 - 8022372
Alignment:
Q  208 catataattacactaaattatgtgattttctaaaattatta 248  Q
    |||||||||||||| |||||| ||||||||| |||||||||    
T  8022412 catataattacactgaattatatgattttctcaaattatta 8022372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 206 - 258
Target Start/End: Complemental strand, 14721291 - 14721239
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaattattaacggtgtcaa 258  Q
    |||||||||||| | | |||||||| ||||||| |||||||||| ||||||||    
T  14721291 cacatataattatagtgaattatgtaattttcttaaattattaatggtgtcaa 14721239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 206 - 238
Target Start/End: Original strand, 17327664 - 17327696
Alignment:
Q  206 cacatataattacactaaattatgtgattttct 238  Q
    |||||||| ||||||||||||||||||||||||    
T  17327664 cacatatagttacactaaattatgtgattttct 17327696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 212 - 248
Target Start/End: Original strand, 17841604 - 17841640
Alignment:
Q  212 taattacactaaattatgtgattttctaaaattatta 248  Q
    ||||||||||||||||||||||||| | |||||||||    
T  17841604 taattacactaaattatgtgattttttcaaattatta 17841640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 206 - 258
Target Start/End: Complemental strand, 21885842 - 21885790
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaattattaacggtgtcaa 258  Q
    |||||||||||| | |||||||||| ||||| | ||||||||| |||||||||    
T  21885842 cacatataattagattaaattatgttatttttttaaattattatcggtgtcaa 21885790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 212 - 248
Target Start/End: Complemental strand, 25096467 - 25096431
Alignment:
Q  212 taattacactaaattatgtgattttctaaaattatta 248  Q
    ||||||||||| ||||||||||||||| |||||||||    
T  25096467 taattacactagattatgtgattttctcaaattatta 25096431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 206 - 256
Target Start/End: Original strand, 22440609 - 22440659
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 256  Q
    |||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  22440609 cacatataattacactgaattatgtgattttctcaaattattaacggtgtc 22440659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 207 - 254
Target Start/End: Complemental strand, 903971 - 903924
Alignment:
Q  207 acatataattacactaaattatgtgattttctaaaattattaacggtg 254  Q
    ||||||||||||||| |||||||||||||||| |||||||||||||||    
T  903971 acatataattacactgaattatgtgattttctcaaattattaacggtg 903924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 206 - 256
Target Start/End: Original strand, 5775367 - 5775417
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 256  Q
    |||||||||||||||| |||||||||||||||| |||||||||| ||||||    
T  5775367 cacatataattacacttaattatgtgattttctcaaattattaatggtgtc 5775417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 206 - 246
Target Start/End: Complemental strand, 13134500 - 13134460
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaattat 246  Q
    ||||||||||||||||||||||||||||||||| |||||||    
T  13134500 cacatataattacactaaattatgtgattttcttaaattat 13134460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 209 - 256
Target Start/End: Original strand, 21539879 - 21539926
Alignment:
Q  209 atataattacactaaattatgtgattttctaaaattattaacggtgtc 256  Q
    |||||||||||||||||||| ||||||||| |||||||||| ||||||    
T  21539879 atataattacactaaattatatgattttcttaaattattaatggtgtc 21539926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 210 - 256
Target Start/End: Original strand, 8423731 - 8423777
Alignment:
Q  210 tataattacactaaattatgtgattttctaaaattattaacggtgtc 256  Q
    |||||||||||| |||||||||||||||| ||||||||| |||||||    
T  8423731 tataattacactgaattatgtgattttctcaaattattagcggtgtc 8423777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 206 - 256
Target Start/End: Complemental strand, 11931330 - 11931280
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 256  Q
    |||||||| |||||||||||||||||||||| | | |||||||||||||||    
T  11931330 cacatatatttacactaaattatgtgattttttcatattattaacggtgtc 11931280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 206 - 248
Target Start/End: Complemental strand, 36635374 - 36635332
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaattatta 248  Q
    |||||||||||||||| |||||||||||||||| |||||||||    
T  36635374 cacatataattacactgaattatgtgattttctcaaattatta 36635332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 206 - 256
Target Start/End: Complemental strand, 40613500 - 40613450
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 256  Q
    |||||||||||||||| |||||||||||||||| ||| ||||| |||||||    
T  40613500 cacatataattacactgaattatgtgattttctcaaaatattagcggtgtc 40613450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 206 - 256
Target Start/End: Complemental strand, 40742641 - 40742591
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 256  Q
    ||||||||||||||||| ||||| ||||||||| |||||||||| ||||||    
T  40742641 cacatataattacactagattatatgattttctcaaattattaatggtgtc 40742591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 208 - 248
Target Start/End: Original strand, 7214533 - 7214573
Alignment:
Q  208 catataattacactaaattatgtgattttctaaaattatta 248  Q
    |||||||||||| |||||||||||||||||| |||||||||    
T  7214533 catataattacattaaattatgtgattttctcaaattatta 7214573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 206 - 238
Target Start/End: Original strand, 10499279 - 10499311
Alignment:
Q  206 cacatataattacactaaattatgtgattttct 238  Q
    |||||||||||||||||||||||||||||||||    
T  10499279 cacatataattacactaaattatgtgattttct 10499311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 206 - 245
Target Start/End: Complemental strand, 17876205 - 17876166
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaatta 245  Q
    ||||||| ||||||||||||||||| ||||||||||||||    
T  17876205 cacatatgattacactaaattatgtcattttctaaaatta 17876166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 174 - 254
Target Start/End: Original strand, 30982853 - 30982935
Alignment:
Q  174 acacgtgttgtgtccaacaccgacacaacacccaca--tataattacactaaattatgtgattttctaaaattattaacggtg 254  Q
    |||||||| |||||  |||||||||| ||||| |||  |||||||||||| || ||||||||||||| |||| |||| |||||    
T  30982853 acacgtgtcgtgtctgacaccgacacgacaccgacacttataattacactgaaatatgtgattttctcaaatcattagcggtg 30982935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 176 - 256
Target Start/End: Original strand, 38148702 - 38148784
Alignment:
Q  176 acgtgttgtgtccaacaccgacacaacacccacatataa--ttacactaaattatgtgattttctaaaattattaacggtgtc 256  Q
    |||||| |||||||||||| |||| ||| | |||| |||  ||||||| |||||||||||||||| ||| ||||| |||||||    
T  38148702 acgtgtcgtgtccaacaccaacacgacatcgacatttaaaattacactgaattatgtgattttctcaaactattagcggtgtc 38148784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 174 - 242
Target Start/End: Original strand, 46083966 - 46084036
Alignment:
Q  174 acacgtgttgtgtccaacaccgacacaacacc--cacatataattacactaaattatgtgattttctaaaa 242  Q
    |||||||| |||||| | || ||||| |||||  ||||||||||||||||| |||||||||||| ||||||    
T  46083966 acacgtgtcgtgtccgatactgacacgacaccgacacatataattacactagattatgtgatttactaaaa 46084036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 206 - 248
Target Start/End: Original strand, 999357 - 999399
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaattatta 248  Q
    ||||||||||||||||||||||| |||||| || |||||||||    
T  999357 cacatataattacactaaattatatgatttactcaaattatta 999399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 209 - 251
Target Start/End: Complemental strand, 3731250 - 3731208
Alignment:
Q  209 atataattacactaaattatgtgattttctaaaattattaacg 251  Q
    |||||||||| ||||||||||||||||||| ||||||| ||||    
T  3731250 atataattaccctaaattatgtgattttctcaaattatcaacg 3731208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 248
Target Start/End: Complemental strand, 17446113 - 17446079
Alignment:
Q  214 attacactaaattatgtgattttctaaaattatta 248  Q
    ||||||||||||||||||||||||| |||||||||    
T  17446113 attacactaaattatgtgattttcttaaattatta 17446079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 177 - 236
Target Start/End: Original strand, 19500836 - 19500897
Alignment:
Q  177 cgtgttgtgtccaacaccgacacaacacc--cacatataattacactaaattatgtgatttt 236  Q
    ||||| |||||| |||||||||| |||||  ||||||||||||||||||| |||||| ||||    
T  19500836 cgtgtcgtgtccgacaccgacacgacaccatcacatataattacactaaaatatgtgttttt 19500897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 206 - 248
Target Start/End: Complemental strand, 33950186 - 33950144
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaattatta 248  Q
    ||||||| |||||| |||||||||||||||||| |||||||||    
T  33950186 cacatatgattacattaaattatgtgattttctcaaattatta 33950144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 258
Target Start/End: Original strand, 40179647 - 40179697
Alignment:
Q  208 catataattacactaaattatgtgattttctaaaattattaacggtgtcaa 258  Q
    |||||||||||||| |||||||||||||| | ||| |||||| ||||||||    
T  40179647 catataattacactgaattatgtgattttttcaaactattaatggtgtcaa 40179697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 206 - 256
Target Start/End: Complemental strand, 48139314 - 48139264
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 256  Q
    |||||||||||||| ||||||||| |||| ||| ||||||||||| |||||    
T  48139314 cacatataattacattaaattatgagattatctcaaattattaacagtgtc 48139264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 194 - 248
Target Start/End: Original strand, 49652969 - 49653023
Alignment:
Q  194 cgacacaacacccacatataattacactaaattatgtgattttctaaaattatta 248  Q
    |||||| ||||| ||||||||||| ||| |||||| ||||||||| |||||||||    
T  49652969 cgacacgacaccaacatataattatactgaattatctgattttcttaaattatta 49653023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 249
Target Start/End: Original strand, 6485626 - 6485663
Alignment:
Q  212 taattacactaaattatgtgattttctaaaattattaa 249  Q
    ||||||||||||||||||||||||| | ||||||||||    
T  6485626 taattacactaaattatgtgattttttcaaattattaa 6485663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 255
Target Start/End: Complemental strand, 16189759 - 16189710
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaattattaacggtgt 255  Q
    |||| ||||||||||| |||||||||||||||| ||||| ||| ||||||    
T  16189759 cacacataattacactgaattatgtgattttctcaaatttttagcggtgt 16189710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 243
Target Start/End: Complemental strand, 17344550 - 17344513
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaat 243  Q
    |||||||||||||| |||||||||||||||||| ||||    
T  17344550 cacatataattacattaaattatgtgattttcttaaat 17344513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 236
Target Start/End: Original strand, 22234865 - 22234929
Alignment:
Q  174 acacgtgttgtgtccaacaccgacacaacacc--cacatataattacactaaattatgtgatttt 236  Q
    |||||||| |||||  |||||||||| |||||  |||||| ||||||||| ||||||||||||||    
T  22234865 acacgtgtcgtgtcagacaccgacacgacaccgacacatagaattacactgaattatgtgatttt 22234929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 249
Target Start/End: Original strand, 27706192 - 27706229
Alignment:
Q  212 taattacactaaattatgtgattttctaaaattattaa 249  Q
    ||||||||||||||||||||||||| | ||||||||||    
T  27706192 taattacactaaattatgtgatttttttaaattattaa 27706229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 251
Target Start/End: Original strand, 44081586 - 44081631
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaattattaacg 251  Q
    |||||||||||||| |||||||| ||||||| | ||||||||||||    
T  44081586 cacatataattacattaaattatatgattttttcaaattattaacg 44081631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 275
Target Start/End: Complemental strand, 2234295 - 2234232
Alignment:
Q  211 ataattacactaaattatgtgattttctaaaattattaacggtgtcaaacatgtcagtatctgtg 275  Q
    ||||||||| | |||||||||||||||| ||||||| ||||||| | | | ||||||||||||||    
T  2234295 ataattacattgaattatgtgattttctcaaattatcaacggtgac-agcgtgtcagtatctgtg 2234232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 183 - 256
Target Start/End: Complemental strand, 7012141 - 7012066
Alignment:
Q  183 gtgtccaacaccgacacaacacc--cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 256  Q
    |||||| ||||||||||||||||   || ||| || ||||| |||||||| ||||||| ||||||||| |||||||    
T  7012141 gtgtccgacaccgacacaacaccgatacctatgatcacactgaattatgtcattttctcaaattattatcggtgtc 7012066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 247
Target Start/End: Complemental strand, 9996889 - 9996849
Alignment:
Q  207 acatataattacactaaattatgtgattttctaaaattatt 247  Q
    ||||||||||| ||| |||||||||||||||| ||||||||    
T  9996889 acatataattatactgaattatgtgattttctcaaattatt 9996849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 206 - 246
Target Start/End: Original strand, 18576046 - 18576086
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaattat 246  Q
    |||||||||||||||  |||||||||||||||| |||||||    
T  18576046 cacatataattacaccgaattatgtgattttctcaaattat 18576086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 174 - 256
Target Start/End: Complemental strand, 3966587 - 3966503
Alignment:
Q  174 acacgtgttgtgtccaacaccgacacaacacc--cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 256  Q
    |||| |||||||||| |||| ||||| |||||  |||||||||||||||| |||| ||||||||||| ||||||||| |||||||    
T  3966587 acacatgttgtgtccgacactgacacgacaccgacacatataattacactgaattgtgtgattttctcaaattattagcggtgtc 3966503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 174 - 256
Target Start/End: Complemental strand, 18592157 - 18592073
Alignment:
Q  174 acacgtgttgtgtccaacaccgacacaacacc--cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 256  Q
    ||||||||||||||| |||||||||| |||||  |||||||||||||| | |||||||| ||||||| ||| ||||| |||||||    
T  18592157 acacgtgttgtgtccgacaccgacacgacaccggcacatataattacattgaattatgtaattttcttaaaatattagcggtgtc 18592073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 206 - 256
Target Start/End: Complemental strand, 27144513 - 27144463
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 256  Q
    |||||||||||||||||||||||||||||| || ||||||||| |||||||    
T  27144513 cacatataattacactaaattatgtgatttcctcaaattattagcggtgtc 27144463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 174 - 256
Target Start/End: Complemental strand, 11686022 - 11685939
Alignment:
Q  174 acacgtgttgtgtccaacaccgacacaacacc--cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 256  Q
    |||||||| |||||| ||||||| || |||||  |||||||||||||||||||||||| || ||||| ||||||||| |||||||    
T  11686022 acacgtgtcgtgtccgacaccga-acgacaccgacacatataattacactaaattatgcgactttctcaaattattagcggtgtc 11685939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 206 - 255
Target Start/End: Complemental strand, 36838593 - 36838544
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaattattaacggtgt 255  Q
    ||||||||||||||||||||||||| ||||||| ||||||||| ||||||    
T  36838593 cacatataattacactaaattatgtaattttctcaaattattagcggtgt 36838544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 205 - 257
Target Start/End: Original strand, 24273038 - 24273090
Alignment:
Q  205 ccacatataattacactaaattatgtgattttctaaaattattaacggtgtca 257  Q
    ||||||||||||||||| |||||||||||||||| |||||| |||| ||||||    
T  24273038 ccacatataattacactgaattatgtgattttctcaaattaataactgtgtca 24273090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 205 - 257
Target Start/End: Complemental strand, 24389176 - 24389124
Alignment:
Q  205 ccacatataattacactaaattatgtgattttctaaaattattaacggtgtca 257  Q
    ||||||||||||||||| |||||||||||||||| |||||| |||| ||||||    
T  24389176 ccacatataattacactgaattatgtgattttctcaaattaataactgtgtca 24389124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 208 - 248
Target Start/End: Complemental strand, 35017085 - 35017045
Alignment:
Q  208 catataattacactaaattatgtgattttctaaaattatta 248  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  35017085 catataattacactaaattatgtgattttctcaaattatta 35017045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 206 - 257
Target Start/End: Original strand, 6471898 - 6471949
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaattattaacggtgtca 257  Q
    |||||||||||||||| |||||||||||||||| ||||||||| | ||||||    
T  6471898 cacatataattacactgaattatgtgattttctcaaattattagccgtgtca 6471949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 174 - 242
Target Start/End: Complemental strand, 21814345 - 21814275
Alignment:
Q  174 acacgtgttgtgtccaacaccgacacaacacc--cacatataattacactaaattatgtgattttctaaaa 242  Q
    |||||||| |||||| |||||||||| |||||  ||||||||||||||||  ||| |||||||||||||||    
T  21814345 acacgtgtcgtgtccgacaccgacacgacaccgacacatataattacactgcattttgtgattttctaaaa 21814275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 206 - 256
Target Start/End: Original strand, 7175028 - 7175078
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 256  Q
    ||||||||||||  | ||||||||||||||||| |||||||||||||||||    
T  7175028 cacatataattatgccaaattatgtgattttctcaaattattaacggtgtc 7175078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 206 - 248
Target Start/End: Original strand, 16203804 - 16203846
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaattatta 248  Q
    |||||||||||||||||||||||| |||||||| |||||||||    
T  16203804 cacatataattacactaaattatgagattttctcaaattatta 16203846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 210 - 256
Target Start/End: Original strand, 28588687 - 28588733
Alignment:
Q  210 tataattacactaaattatgtgattttctaaaattattaacggtgtc 256  Q
    |||||||||||| |||||||||||||||| ||||||||| |||||||    
T  28588687 tataattacactgaattatgtgattttctcaaattattaccggtgtc 28588733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 207 - 256
Target Start/End: Original strand, 2577190 - 2577239
Alignment:
Q  207 acatataattacactaaattatgtgattttctaaaattattaacggtgtc 256  Q
    |||||| ||||||||||||||||| ||||||| ||||||||| |||||||    
T  2577190 acatatgattacactaaattatgtcattttctcaaattattatcggtgtc 2577239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 174 - 248
Target Start/End: Complemental strand, 21522834 - 21522758
Alignment:
Q  174 acacgtgttgtgtccaacaccgacacaacacccaca--tataattacactaaattatgtgattttctaaaattatta 248  Q
    |||||||| |||||| |||||||||| ||||| |||  | |||||||||| |||||||| ||||| |||||||||||    
T  21522834 acacgtgtcgtgtccgacaccgacacgacaccgacaattgtaattacactgaattatgttattttttaaaattatta 21522758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 174 - 248
Target Start/End: Complemental strand, 21533400 - 21533324
Alignment:
Q  174 acacgtgttgtgtccaacaccgacacaacacccaca--tataattacactaaattatgtgattttctaaaattatta 248  Q
    |||||||| |||||| |||||||||| ||||| |||  | |||||||||| |||||||| ||||| |||||||||||    
T  21533400 acacgtgtcgtgtccgacaccgacacgacaccgacaattgtaattacactgaattatgttattttttaaaattatta 21533324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 206 - 255
Target Start/End: Original strand, 30502397 - 30502446
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaattattaacggtgt 255  Q
    |||||||||||||||| ||||| |||||||||| ||||||||| ||||||    
T  30502397 cacatataattacactgaattaagtgattttctcaaattattagcggtgt 30502446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 206 - 255
Target Start/End: Original strand, 30542740 - 30542789
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaattattaacggtgt 255  Q
    |||||||||||||||| ||||| |||||||||| ||||||||| ||||||    
T  30542740 cacatataattacactgaattaagtgattttctcaaattattagcggtgt 30542789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 206 - 246
Target Start/End: Complemental strand, 14873567 - 14873527
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaattat 246  Q
    |||||||||||||||||||||||||| |||||| |||||||    
T  14873567 cacatataattacactaaattatgtgcttttctcaaattat 14873527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 206 - 242
Target Start/End: Complemental strand, 39758322 - 39758286
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaa 242  Q
    |||||||||||||||| ||||||||||||||||||||    
T  39758322 cacatataattacactgaattatgtgattttctaaaa 39758286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 174 - 242
Target Start/End: Complemental strand, 6401582 - 6401512
Alignment:
Q  174 acacgtgttgtgtccaacaccgacacaacacc--cacatataattacactaaattatgtgattttctaaaa 242  Q
    |||||||| |||||| |||| ||||| |||||  ||||||||||||||||  ||| |||||||||||||||    
T  6401582 acacgtgtcgtgtccgacactgacacgacaccgacacatataattacactgtattttgtgattttctaaaa 6401512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 209 - 248
Target Start/End: Complemental strand, 12927701 - 12927662
Alignment:
Q  209 atataattacactaaattatgtgattttctaaaattatta 248  Q
    |||||||||||||||||||| ||||||||| |||||||||    
T  12927701 atataattacactaaattatatgattttctcaaattatta 12927662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 210 - 257
Target Start/End: Original strand, 23016002 - 23016049
Alignment:
Q  210 tataattacactaaattatgtgattttctaaaattattaacggtgtca 257  Q
    |||||||||||| |||||||||||||||| |||| ||||||| |||||    
T  23016002 tataattacactgaattatgtgattttctcaaatgattaacgatgtca 23016049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 210 - 253
Target Start/End: Complemental strand, 30098372 - 30098329
Alignment:
Q  210 tataattacactaaattatgtgattttctaaaattattaacggt 253  Q
    |||||||||| | |||||||||||||||| ||||||||||||||    
T  30098372 tataattacattgaattatgtgattttctcaaattattaacggt 30098329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 206 - 248
Target Start/End: Original strand, 23012417 - 23012459
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaattatta 248  Q
    |||||||||||||| |||||||| ||||||||| |||||||||    
T  23012417 cacatataattacattaaattatatgattttctcaaattatta 23012459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 206 - 256
Target Start/End: Complemental strand, 23221033 - 23220983
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 256  Q
    ||||||| || |||||||||||||||||||| | ||||||||| |||||||    
T  23221033 cacatatgataacactaaattatgtgattttatcaaattattagcggtgtc 23220983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 209 - 251
Target Start/End: Original strand, 28262408 - 28262450
Alignment:
Q  209 atataattacactaaattatgtgattttctaaaattattaacg 251  Q
    |||||||||| ||||||||||||||||||| ||||||| ||||    
T  28262408 atataattaccctaaattatgtgattttctcaaattatcaacg 28262450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 256
Target Start/End: Original strand, 38749557 - 38749622
Alignment:
Q  193 ccgacacaacacc--cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 256  Q
    |||||||||||||  |||||||||||||| | |||||||| ||||| | ||||||||| |||||||    
T  38749557 ccgacacaacaccaacacatataattacattgaattatgtcattttttcaaattattatcggtgtc 38749622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 206 - 248
Target Start/End: Original strand, 41091266 - 41091308
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaattatta 248  Q
    |||||||||||||||| |||||||||||||||| |||| ||||    
T  41091266 cacatataattacactgaattatgtgattttctcaaatcatta 41091308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 258
Target Start/End: Original strand, 17593734 - 17593783
Alignment:
Q  209 atataattacactaaattatgtgattttctaaaattattaacggtgtcaa 258  Q
    ||||||||||||| ||||| |||||||||| ||||||||| |||| ||||    
T  17593734 atataattacactgaattacgtgattttctcaaattattagcggtttcaa 17593783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 212 - 248
Target Start/End: Complemental strand, 14674313 - 14674277
Alignment:
Q  212 taattacactaaattatgtgattttctaaaattatta 248  Q
    ||||||||||||||||||||||||| | |||||||||    
T  14674313 taattacactaaattatgtgattttttcaaattatta 14674277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 206 - 246
Target Start/End: Original strand, 18421850 - 18421890
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaattat 246  Q
    ||||||||||||||||  ||||||||||||||| |||||||    
T  18421850 cacatataattacactggattatgtgattttctcaaattat 18421890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 206 - 250
Target Start/End: Complemental strand, 19429482 - 19429438
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaattattaac 250  Q
    |||| ||| ||||||||| |||||||||||||| |||||||||||    
T  19429482 cacagatatttacactaagttatgtgattttctcaaattattaac 19429438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 212 - 248
Target Start/End: Complemental strand, 19579745 - 19579709
Alignment:
Q  212 taattacactaaattatgtgattttctaaaattatta 248  Q
    ||||| ||||||||||||||||||||| |||||||||    
T  19579745 taattgcactaaattatgtgattttctcaaattatta 19579709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 212 - 248
Target Start/End: Complemental strand, 33178069 - 33178033
Alignment:
Q  212 taattacactaaattatgtgattttctaaaattatta 248  Q
    ||||||||||||||||||||||||| | |||||||||    
T  33178069 taattacactaaattatgtgatttttttaaattatta 33178033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1528 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold1528
Description:

Target: scaffold1528; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 179 - 256
Target Start/End: Complemental strand, 1114 - 1035
Alignment:
Q  179 tgttgtgtccaacaccgacacaacac--ccacatataattacactaaattatgtgattttctaaaattattaacggtgtc 256  Q
    ||||||||||||||||||||| ||||   |||||||| ||||||| |||||||| ||||| | ||||||||| |||||||    
T  1114 tgttgtgtccaacaccgacaccacactgacacatatagttacactgaattatgtaattttttcaaattattagcggtgtc 1035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 210 - 258
Target Start/End: Original strand, 25781 - 25829
Alignment:
Q  210 tataattacactaaattatgtgattttctaaaattattaacggtgtcaa 258  Q
    |||||||||||||||||||||||||||||  |||||||||| |||||||    
T  25781 tataattacactaaattatgtgattttctctaattattaaccgtgtcaa 25829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 195 - 256
Target Start/End: Complemental strand, 28913 - 28850
Alignment:
Q  195 gacacaacacc--cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 256  Q
    |||||||||||  |||||||||||||| | ||||||| |||||||| |||||||||||||||||    
T  28913 gacacaacaccgacacatataattacattgaattatgcgattttcttaaattattaacggtgtc 28850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 206 - 256
Target Start/End: Complemental strand, 99943 - 99893
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaattattaacggtgtc 256  Q
    |||||||||||||| | |||||||| ||||||||||||||||| |||||||    
T  99943 cacatataattacattgaattatgttattttctaaaattattatcggtgtc 99893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 209 - 255
Target Start/End: Complemental strand, 90890 - 90844
Alignment:
Q  209 atataattacactaaattatgtgattttctaaaattattaacggtgt 255  Q
    ||||||||||||| |||||| ||||||||| |||||||||| |||||    
T  90890 atataattacactgaattatatgattttctcaaattattaatggtgt 90844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 247
Target Start/End: Complemental strand, 53264 - 53189
Alignment:
Q  174 acacgtgttgtgtccaacaccgacacaacacccaca--tataattacactaaattatgtgattttctaaaattatt 247  Q
    ||||||||  ||||| ||||||||||  |||| |||  |||||||||||| |||||||||||||||| ||||||||    
T  53264 acacgtgtcatgtccgacaccgacacggcaccgacacttataattacactgaattatgtgattttctcaaattatt 53189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 254
Target Start/End: Original strand, 68255 - 68299
Alignment:
Q  210 tataattacactaaattatgtgattttctaaaattattaacggtg 254  Q
    |||||||| |||||||||| ||||||||| |||||||||||||||    
T  68255 tataattatactaaattatatgattttctcaaattattaacggtg 68299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 168 - 248
Target Start/End: Original strand, 263341 - 263423
Alignment:
Q  168 tatcaaacacgtgttgtgtccaacaccgacacaacacccaca--tataattacactaaattatgtgattttctaaaattatta 248  Q
    |||| ||||||||| |||||  |||||||||| ||||  |||  |||||||||||| ||||||||| |||||| |||||||||    
T  263341 tatcgaacacgtgtcgtgtctgacaccgacacgacactgacacttataattacactgaattatgtggttttctcaaattatta 263423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0697 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0697
Description:

Target: scaffold0697; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 210 - 256
Target Start/End: Complemental strand, 1690 - 1644
Alignment:
Q  210 tataattacactaaattatgtgattttctaaaattattaacggtgtc 256  Q
    |||||||| || ||||||| ||||||||| |||||||||||||||||    
T  1690 tataattataccaaattatatgattttctcaaattattaacggtgtc 1644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 206 - 248
Target Start/End: Original strand, 9756 - 9798
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaattatta 248  Q
    |||||||||||||||| ||||| |||||||||| |||||||||    
T  9756 cacatataattacactgaattaagtgattttctcaaattatta 9798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 206 - 248
Target Start/End: Original strand, 135321 - 135363
Alignment:
Q  206 cacatataattacactaaattatgtgattttctaaaattatta 248  Q
    |||||||||||||||  |||||||||||||||| |||||||||    
T  135321 cacatataattacacagaattatgtgattttctcaaattatta 135363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 236
Target Start/End: Complemental strand, 241678 - 241614
Alignment:
Q  174 acacgtgttgtgtccaacaccgacacaacacccacat--ataattacactaaattatgtgatttt 236  Q
    |||||||| |||||| ||||| |||| ||||| |||   ||||||||||||||||||||||||||    
T  241678 acacgtgtcgtgtccgacaccaacacgacaccgacactcataattacactaaattatgtgatttt 241614  T

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Target: scaffold0136 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 212 - 256
Target Start/End: Original strand, 3864 - 3908
Alignment:
Q  212 taattacactaaattatgtgattttctaaaattattaacggtgtc 256  Q
    |||||||||| |||||||||||||| | ||||||||||| |||||    
T  3864 taattacactgaattatgtgatttttttaaattattaaccgtgtc 3908  T

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Target: scaffold0027 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 212 - 256
Target Start/End: Complemental strand, 46726 - 46682
Alignment:
Q  212 taattacactaaattatgtgattttctaaaattattaacggtgtc 256  Q
    |||||||||| |||||||||||||| | ||||||||||| |||||    
T  46726 taattacactgaattatgtgattttttcaaattattaactgtgtc 46682  T

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Target: scaffold0018 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 212 - 256
Target Start/End: Original strand, 192264 - 192308
Alignment:
Q  212 taattacactaaattatgtgattttctaaaattattaacggtgtc 256  Q
    |||||||||  |||||||| ||||||| |||||||||||||||||    
T  192264 taattacaccgaattatgtaattttctcaaattattaacggtgtc 192308  T

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Target: scaffold0011 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 212 - 248
Target Start/End: Original strand, 17764 - 17800
Alignment:
Q  212 taattacactaaattatgtgattttctaaaattatta 248  Q
    ||||||||||||||||||||||||| | |||||||||    
T  17764 taattacactaaattatgtgattttttcaaattatta 17800  T

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