View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1126_low_155 (Length: 286)

Name: NF1126_low_155
Description: NF1126
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1126_low_155
NF1126_low_155
[»] chr4 (53 HSPs)
chr4 (79-241)||(29788676-29788838)
chr4 (81-240)||(29788354-29788513)
chr4 (80-240)||(29789157-29789317)
chr4 (79-240)||(29790895-29791056)
chr4 (79-239)||(29790724-29790884)
chr4 (92-240)||(29791065-29791213)
chr4 (79-240)||(29788514-29788675)
chr4 (79-240)||(29789318-29789479)
chr4 (85-242)||(29788198-29788353)
chr4 (79-241)||(29789000-29789156)
chr4 (80-234)||(29788839-29788993)
chr4 (79-232)||(29789940-29790093)
chr4 (85-240)||(29789784-29789939)
chr4 (79-234)||(29790562-29790717)
chr4 (85-240)||(29791518-29791673)
chr4 (79-234)||(29791985-29792140)
chr4 (79-240)||(29791830-29791984)
chr4 (85-240)||(29790406-29790561)
chr4 (90-241)||(29792153-29792304)
chr4 (90-240)||(29789627-29789777)
chr4 (90-240)||(29790249-29790399)
chr4 (90-240)||(29791361-29791511)
chr4 (79-240)||(29791674-29791829)
chr4 (79-150)||(29789480-29789551)
chr4 (79-150)||(29790102-29790173)
chr4 (79-148)||(29791214-29791283)
chr4 (90-167)||(29792311-29792387)
chr4 (90-205)||(40038096-40038209)
chr4 (90-205)||(40040198-40040311)
chr4 (134-241)||(29792399-29792502)
chr4 (90-205)||(40039148-40039259)
chr4 (134-241)||(29792566-29792678)
chr4 (173-241)||(29790174-29790242)
chr4 (173-241)||(29791286-29791354)
chr4 (90-205)||(40042857-40042972)
chr4 (90-205)||(40042534-40042648)
chr4 (90-215)||(40041406-40041531)
chr4 (90-215)||(40042686-40042811)
chr4 (133-205)||(40038787-40038860)
chr4 (99-215)||(40039297-40039413)
chr4 (133-205)||(40042006-40042079)
chr4 (90-191)||(40042388-40042488)
chr4 (127-167)||(29792516-29792556)
chr4 (173-240)||(29789552-29789619)
chr4 (99-215)||(40038247-40038363)
chr4 (133-205)||(40040888-40040961)
chr4 (90-191)||(40041268-40041368)
chr4 (144-215)||(40041569-40041641)
chr4 (113-215)||(40037164-40037266)
chr4 (90-188)||(40037360-40037457)
chr4 (133-201)||(40039840-40039909)
chr4 (146-205)||(40037742-40037802)
chr4 (43-79)||(29796479-29796515)
[»] chr3 (91 HSPs)
chr3 (79-240)||(41133848-41134009)
chr3 (80-240)||(41130041-41130201)
chr3 (79-241)||(41135666-41135828)
chr3 (79-241)||(41126326-41126488)
chr3 (79-240)||(41129879-41130040)
chr3 (79-240)||(41130365-41130526)
chr3 (80-240)||(41135829-41135989)
chr3 (79-240)||(41126489-41126651)
chr3 (80-240)||(41130851-41131011)
chr3 (79-241)||(41130202-41130364)
chr3 (86-240)||(41130689-41130843)
chr3 (79-240)||(41130527-41130688)
chr3 (80-241)||(41136147-41136308)
chr3 (79-241)||(41133685-41133847)
chr3 (80-241)||(41135990-41136146)
chr3 (90-241)||(41126010-41126161)
chr3 (100-240)||(41131013-41131153)
chr3 (90-241)||(41126168-41126319)
chr3 (90-225)||(41135524-41135659)
chr3 (85-199)||(41136310-41136423)
chr3 (90-241)||(41133531-41133678)
chr3 (134-241)||(41129085-41129188)
chr3 (152-234)||(34091031-34091114)
chr3 (130-241)||(41136429-41136535)
chr3 (90-241)||(31234142-31234291)
chr3 (149-234)||(34093486-34093572)
chr3 (136-241)||(34093787-34093893)
chr3 (149-241)||(34091819-34091912)
chr3 (134-241)||(31233559-31233667)
chr3 (134-241)||(34090703-34090812)
chr3 (134-241)||(41128881-41128991)
chr3 (90-241)||(31235073-31235222)
chr3 (90-241)||(31235487-31235636)
chr3 (90-241)||(31236111-31236260)
chr3 (90-241)||(31236735-31236884)
chr3 (134-222)||(34091172-34091261)
chr3 (149-241)||(34092138-34092231)
chr3 (90-241)||(31233831-31233979)
chr3 (90-234)||(31235955-31236097)
chr3 (93-241)||(31236894-31237040)
chr3 (134-241)||(41133327-41133437)
chr3 (90-241)||(31236267-31236416)
chr3 (90-241)||(31236423-31236572)
chr3 (90-241)||(31233674-31233824)
chr3 (90-167)||(34091405-34091482)
chr3 (149-241)||(34093991-34094084)
chr3 (92-167)||(34093034-34093109)
chr3 (92-167)||(34093907-34093982)
chr3 (90-241)||(31234449-31234598)
chr3 (90-241)||(31236579-31236728)
chr3 (90-241)||(31237047-31237196)
chr3 (149-241)||(34091489-34091582)
chr3 (90-167)||(34092387-34092464)
chr3 (92-219)||(34094142-34094285)
chr3 (149-241)||(34094294-34094387)
chr3 (90-167)||(41125926-41126003)
chr3 (134-217)||(34091309-34091393)
chr3 (90-166)||(34092055-34092131)
chr3 (90-166)||(34093368-34093444)
chr3 (92-167)||(41129001-41129076)
chr3 (92-167)||(41133447-41133522)
chr3 (90-241)||(31235643-31235792)
chr3 (149-234)||(34093125-34093211)
chr3 (90-241)||(31234916-31235066)
chr3 (90-167)||(34092704-34092781)
chr3 (90-167)||(34093703-34093780)
chr3 (149-221)||(34094443-34094516)
chr3 (106-167)||(41129200-41129261)
chr3 (134-221)||(34091958-34092046)
chr3 (144-241)||(31235850-31235948)
chr3 (134-192)||(41125856-41125914)
chr3 (90-167)||(34090940-34091017)
chr3 (134-217)||(34092608-34092692)
chr3 (134-217)||(34093271-34093355)
chr3 (90-241)||(31234605-31234754)
chr3 (90-241)||(31234761-31234909)
chr3 (134-187)||(34093638-34093691)
chr3 (144-223)||(31235383-31235463)
chr3 (134-221)||(34092287-34092375)
chr3 (150-241)||(34092788-34092880)
chr3 (136-210)||(34092945-34093020)
chr3 (90-241)||(31233986-31234135)
chr3 (134-192)||(34089750-34089808)
chr3 (92-167)||(34091739-34091810)
chr3 (135-202)||(34092495-34092562)
chr3 (79-114)||(41129843-41129878)
chr3 (144-241)||(31234342-31234442)
chr3 (130-167)||(34094658-34094695)
chr3 (90-123)||(31234298-31234331)
chr3 (134-167)||(34090895-34090928)
chr3 (205-241)||(34093451-34093487)
[»] chr6 (14 HSPs)
chr6 (93-241)||(3084923-3085073)
chr6 (93-241)||(3084603-3084753)
chr6 (90-241)||(3084760-3084913)
chr6 (134-241)||(3084211-3084319)
chr6 (134-239)||(3085169-3085275)
chr6 (90-167)||(3085080-3085157)
chr6 (90-167)||(3085284-3085361)
chr6 (90-167)||(3085540-3085617)
chr6 (158-241)||(3085449-3085533)
chr6 (134-221)||(3086856-3086944)
chr6 (158-241)||(3085705-3085789)
chr6 (158-241)||(3084509-3084593)
chr6 (108-167)||(3084362-3084421)
chr6 (134-167)||(3085629-3085662)
[»] chr8 (28 HSPs)
chr8 (90-241)||(36231283-36231431)
chr8 (132-241)||(36233464-36233573)
chr8 (90-241)||(36233150-36233300)
chr8 (92-241)||(36228110-36228257)
chr8 (105-241)||(36231438-36231572)
chr8 (90-241)||(36231595-36231742)
chr8 (90-241)||(36230187-36230336)
chr8 (90-217)||(36230992-36231117)
chr8 (90-241)||(36232839-36232988)
chr8 (90-241)||(36227954-36228103)
chr8 (90-241)||(36232995-36233143)
chr8 (92-241)||(36229675-36229822)
chr8 (146-241)||(36232228-36232324)
chr8 (90-241)||(36231904-36232051)
chr8 (144-241)||(36231749-36231847)
chr8 (90-241)||(36232528-36232679)
chr8 (90-218)||(36230833-36230957)
chr8 (92-215)||(36230030-36230150)
chr8 (144-241)||(36232686-36232784)
chr8 (89-241)||(36233307-36233458)
chr8 (90-184)||(36232130-36232221)
chr8 (90-241)||(36230343-36230492)
chr8 (90-241)||(36230527-36230676)
chr8 (90-241)||(36231124-36231276)
chr8 (90-241)||(36232375-36232521)
chr8 (150-241)||(36228266-36228358)
chr8 (144-241)||(36229859-36229957)
chr8 (90-123)||(36229966-36229999)
[»] chr1 (3 HSPs)
chr1 (130-241)||(35091073-35091185)
chr1 (89-205)||(35081005-35081119)
chr1 (90-191)||(35080843-35080943)
[»] chr7 (5 HSPs)
chr7 (90-205)||(28961971-28962084)
chr7 (90-205)||(28962120-28962235)
chr7 (90-215)||(28961639-28961768)
chr7 (131-215)||(28961550-28961635)
chr7 (113-204)||(28961831-28961922)


Alignment Details
Target: chr4 (Bit Score: 147; Significance: 1e-77; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 79 - 241
Target Start/End: Original strand, 29788676 - 29788838
Alignment:
Q  79 cgatgccttgatcgatgacccgaaaagaattgacggatattatttattccattaaattttgtaaatgttgggatgcctcggtgattttacaatcttgagt 178  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29788676 cgatgccttgatcgatgacccgaaaagaattgacggatattatttgttccattaaattttgtaaatgttgggatgcctcggtgattttacaatcttgagt 29788775  T
Q  179 gcaattctagactagaattgtcactcaaatatgatatatgagcctgagttttgaaagtattat 241  Q
    |||||||||||||| |||||||||||| |||||||||||||||||||||||||||| ||||||    
T  29788776 gcaattctagactaaaattgtcactcagatatgatatatgagcctgagttttgaaattattat 29788838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 81 - 240
Target Start/End: Original strand, 29788354 - 29788513
Alignment:
Q  81 atgccttgatcgatgacccgaaaagaattgacggatattatttattccattaaattttgtaaatgttgggatgcctcggtgattttacaatcttgagtgc 180  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  29788354 atgccttgatcgatgacccgaaaagaattgacggatattatttgttccattaaattttttaaatgttgggatgcctcggtgattttacaatcttgagtgc 29788453  T
Q  181 aattctagactagaattgtcactcaaatatgatatatgagcctgagttttgaaagtatta 240  Q
    |||||||||||||||||||| |||| |||||||||||||||||||||||||||| |||||    
T  29788454 aattctagactagaattgtcgctcagatatgatatatgagcctgagttttgaaattatta 29788513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 80 - 240
Target Start/End: Original strand, 29789157 - 29789317
Alignment:
Q  80 gatgccttgatcgatgacccgaaaagaattgacggatattatttattccattaaattttgtaaatgttgggatgcctcggtgattttacaatcttgagtg 179  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  29789157 gatgccttgatcgatgacccgaaaagaattgacggatattatttgttccattaaattttgtaaatgttgggatgcctcggtgattttacaatcttgagcg 29789256  T
Q  180 caattctagactagaattgtcactcaaatatgatatatgagcctgagttttgaaagtatta 240  Q
    |||||||||| ||||||||| ||||| |||||||||||||||||||||||||||| |||||    
T  29789257 caattctagattagaattgtgactcatatatgatatatgagcctgagttttgaaattatta 29789317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 79 - 240
Target Start/End: Original strand, 29790895 - 29791056
Alignment:
Q  79 cgatgccttgatcgatgacccgaaaagaattgacggatattatttattccattaaattttgtaaatgttgggatgcctcggtgattttacaatcttgagt 178  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29790895 cgatgccttgatcgatgacccgaaaagaattgacggatattatttgttccattaaattttgtaaatgttgggatgcctcggtgattttacaatcttgagt 29790994  T
Q  179 gcaattctagactagaattgtcactcaaatatgatatatgagcctgagttttgaaagtatta 240  Q
    ||||||||||| ||||||| | ||||| ||||||||||||| |||||||||||||| |||||    
T  29790995 gcaattctagattagaattatgactcagatatgatatatgatcctgagttttgaaattatta 29791056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 79 - 239
Target Start/End: Original strand, 29790724 - 29790884
Alignment:
Q  79 cgatgccttgatcgatgacccgaaaagaattgacggatattatttattccattaaattttgtaaatgttgggatgcctcggtgattttacaatcttgagt 178  Q
    ||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  29790724 cgatgtcttgatcgatgacccgaaaagaattgacggatattatttgttccattaaattttgtaaatgttgggatgcctcggcgattttacaatcttgagt 29790823  T
Q  179 gcaattctagactagaattgtcactcaaatatgatatatgagcctgagttttgaaagtatt 239  Q
    ||||||||||||||||||||||||||| ||| ||||||||||||||||| |||||| ||||    
T  29790824 gcaattctagactagaattgtcactcagataagatatatgagcctgagtattgaaattatt 29790884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 92 - 240
Target Start/End: Original strand, 29791065 - 29791213
Alignment:
Q  92 gatgacccgaaaagaattgacggatattatttattccattaaattttgtaaatgttgggatgcctcggtgattttacaatcttgagtgcaattctagact 191  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  29791065 gatgacccgaaaagaattgacggatattatttgttccattaaattttgtaaatgttgggatgcctcggtgattttaaaatcttgagtgcaattctagact 29791164  T
Q  192 agaattgtcactcaaatatgatatatgagcctgagttttgaaagtatta 240  Q
    |||||||||||||| |||||||||||||||||||||||||||| |||||    
T  29791165 agaattgtcactcagatatgatatatgagcctgagttttgaaattatta 29791213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 79 - 240
Target Start/End: Original strand, 29788514 - 29788675
Alignment:
Q  79 cgatgccttgatcgatgacccgaaaagaattgacggatattatttattccattaaattttgtaaatgttgggatgcctcggtgattttacaatcttgagt 178  Q
    ||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29788514 cgatgccttaatcgatgacccaaaaagaattgacggatattatttgttccattaaattttgtaaatgttgggatgcctcggtgattttacaatcttgagt 29788613  T
Q  179 gcaattctagactagaattgtcactcaaatatgatatatgagcctgagttttgaaagtatta 240  Q
    |||||||||||||| ||||||  |||| |||||||||||||||||||||||||||| |||||    
T  29788614 gcaattctagactaaaattgttgctcagatatgatatatgagcctgagttttgaaattatta 29788675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 79 - 240
Target Start/End: Original strand, 29789318 - 29789479
Alignment:
Q  79 cgatgccttgatcgatgacccgaaaagaattgacggatattatttattccattaaattttgtaaatgttgggatgcctcggtgattttacaatcttgagt 178  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| |||||||||||||||||||||||||||||||     
T  29789318 cgatgccttgatcgatgacccgaaaagaattgacggatattatttgttccattaaaatttgtaaatggtgggatgcctcggtgattttacaatcttgagc 29789417  T
Q  179 gcaattctagactagaattgtcactcaaatatgatatatgagcctgagttttgaaagtatta 240  Q
    ||||||||||| ||||||||| ||||| |||||||||||||||||||||||||||| |||||    
T  29789418 gcaattctagattagaattgtgactcatatatgatatatgagcctgagttttgaaattatta 29789479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 85 - 242
Target Start/End: Original strand, 29788198 - 29788353
Alignment:
Q  85 cttgatcgatgacccgaaaagaattgacggatattatttattccattaaattttgtaaatgttgggatgcctcggtgattttacaatcttgagtgcaatt 184  Q
    |||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  29788198 cttgatcgatgacccgaaaagaattgaccgatattatttgttccattaaattttgtaaatgttgggatg--tcggtgattttacaatcttgagtgcaatt 29788295  T
Q  185 ctagactagaattgtcactcaaatatgatatatgagcctgagttttgaaagtattatt 242  Q
    ||||||||||||||||||||| ||| |||||||||||||||||||||||| |||||||    
T  29788296 ctagactagaattgtcactcagataagatatatgagcctgagttttgaaattattatt 29788353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 79 - 241
Target Start/End: Original strand, 29789000 - 29789156
Alignment:
Q  79 cgatgccttgatcgatgacccgaaaagaattgacggatattatttattccattaaattttgtaaatgttgggatgcctcggtgattttacaatcttgagt 178  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||      |||||||||||||||||||||||||||| |||    
T  29789000 cgatgccttgatcgatgacccgaaaagaattgacggatattatttgttccattaaattttgt------tgggatgcctcggtgattttacaatcttcagt 29789093  T
Q  179 gcaattctagactagaattgtcactcaaatatgatatatgagcctgagttttgaaagtattat 241  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  29789094 gcaattctagactagaattgtcactcagatatgatatatgagcctgagttttgaaattattat 29789156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 80 - 234
Target Start/End: Original strand, 29788839 - 29788993
Alignment:
Q  80 gatgccttgatcgatgacccgaaaagaattgacggatattatttattccattaaattttgtaaatgttgggatgcctcggtgattttacaatcttgagtg 179  Q
    |||||||||||||||||||||||||| ||||||  ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  29788839 gatgccttgatcgatgacccgaaaagtattgacatatattatttgttccattaaattttgtaaatgttgggatgcctcggtgattttacattcttgagtg 29788938  T
Q  180 caattctagactagaattgtcactcaaatatgatatatgagcctgagttttgaaa 234  Q
    |||||||||||||||||||||||| | ||||||||||||||||||| ||||||||    
T  29788939 caattctagactagaattgtcacttagatatgatatatgagcctgaattttgaaa 29788993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 79 - 232
Target Start/End: Original strand, 29789940 - 29790093
Alignment:
Q  79 cgatgccttgatcgatgacccgaaaagaattgacggatattatttattccattaaattttgtaaatgttgggatgcctcggtgattttacaatcttgagt 178  Q
    |||||||||||| ||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| ||||||||     
T  29789940 cgatgccttgatggatgacccgaaaagatttgacggatattatttgttccattaaattttgtaaatgttgggatgcctcgatgattttactatcttgagc 29790039  T
Q  179 gcaattctagactagaattgtcactcaaatatgatatatgagcctgagttttga 232  Q
    ||||||||||||||||||||||||||| |||| ||| |||||||||||||||||    
T  29790040 gcaattctagactagaattgtcactcagatataatacatgagcctgagttttga 29790093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 85 - 240
Target Start/End: Original strand, 29789784 - 29789939
Alignment:
Q  85 cttgatcgatgacccgaaaagaattgacggatattatttattccattaaattttgtaaatgttgggatgcctcggtgattttacaatcttgagtgcaatt 184  Q
    |||||||| |||||||| ||||||||||||||||||| | ||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||    
T  29789784 cttgatcgttgacccgataagaattgacggatattatctgttccattaaattttgtaaatgtttggatgccttggtgattttacaatcttgagtgcaatt 29789883  T
Q  185 ctagactagaattgtcactcaaatatgatatatgagcctgagttttgaaagtatta 240  Q
    ||||||||||||||||||||| ||||||||||||||||  |||||||||| |||||    
T  29789884 ctagactagaattgtcactcagatatgatatatgagccaaagttttgaaattatta 29789939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 79 - 234
Target Start/End: Original strand, 29790562 - 29790717
Alignment:
Q  79 cgatgccttgatcgatgacccgaaaagaattgacggatattatttattccattaaattttgtaaatgttgggatgcctcggtgattttacaatcttgagt 178  Q
    |||||||||||||||||||||||||||| |||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  29790562 cgatgccttgatcgatgacccgaaaagatttgacggatattatttgtttcattaaattttgtaaatgttgggatgcctcggtgattttacaatcttgact 29790661  T
Q  179 gcaattctagactagaattgtcactcaaatatgatatatgagcctgagttttgaaa 234  Q
    ||||||||||||||||| ||||| ||| |||||||||||||  || ||||||||||    
T  29790662 gcaattctagactagaaatgtcagtcagatatgatatatgattctaagttttgaaa 29790717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 85 - 240
Target Start/End: Original strand, 29791518 - 29791673
Alignment:
Q  85 cttgatcgatgacccgaaaagaattgacggatattatttattccattaaattttgtaaatgttgggatgcctcggtgattttacaatcttgagtgcaatt 184  Q
    ||||||||||||||||||||||||| | ||||||||| | ||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||    
T  29791518 cttgatcgatgacccgaaaagaatttatggatattatctgttccattaaattttgtaaatgtttggatgccttggtgattttacaatcttgagtgcaatt 29791617  T
Q  185 ctagactagaattgtcactcaaatatgatatatgagcctgagttttgaaagtatta 240  Q
    ||||||||||||||||||||| |||| ||| ||||||||||||||||||| |||||    
T  29791618 ctagactagaattgtcactcatatatcataaatgagcctgagttttgaaattatta 29791673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 79 - 234
Target Start/End: Original strand, 29791985 - 29792140
Alignment:
Q  79 cgatgccttgatcgatgacccgaaaagaattgacggatattatttattccattaaattttgtaaatgttgggatgcctcggtgattttacaatcttgagt 178  Q
    |||||||||||| ||||| ||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| |||||||||    
T  29791985 cgatgccttgatggatgaaccgaaaagaatcgacggatattatttgttccattaaattttgtaaatgttgggatgccttggtgattttaccatcttgagt 29792084  T
Q  179 gcaattctagactagaattgtcactcaaatatgatatatgagcctgagttttgaaa 234  Q
    || |||||||||||||||||||||||| ||||||||| ||||||| ||||||||||    
T  29792085 gcgattctagactagaattgtcactcagatatgatatctgagccttagttttgaaa 29792140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 79 - 240
Target Start/End: Original strand, 29791830 - 29791984
Alignment:
Q  79 cgatgccttgatcgatgacccgaaaagaattgacggatattatttattccattaaattttgtaaatgttgggatgcctcggtgattttacaatcttgagt 178  Q
    |||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||      |    
T  29791830 cgatgccttgatcgatgacc-gaaaagaattgacggatattatttgttccattaaattttgtaaatgtttggatgcctcggtgattttacaat------t 29791922  T
Q  179 gcaattctagactagaattgtcactcaaatatgatatatgagcctgagttttgaaagtatta 240  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||    
T  29791923 gcaattctagactagaattgtcactcagatatgatatatgagcctgagttttgaaattatta 29791984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 85 - 240
Target Start/End: Original strand, 29790406 - 29790561
Alignment:
Q  85 cttgatcgatgacccgaaaagaattgacggatattatttattccattaaattttgtaaatgttgggatgcctcggtgattttacaatcttgagtgcaatt 184  Q
    ||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||  ||||||| ||||||||||||||||||  |||||||    
T  29790406 cttgatcgatgacccgaaaagaattgacggatattatctgttccattaaattttgtaaatgtttagatgccttggtgattttacaatcttggttgcaatt 29790505  T
Q  185 ctagactagaattgtcactcaaatatgatatatgagcctgagttttgaaagtatta 240  Q
     ||||||||||||||| |||| ||||||||||||||||||| |||||||| |||||    
T  29790506 ttagactagaattgtcgctcagatatgatatatgagcctgacttttgaaattatta 29790561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 90 - 241
Target Start/End: Original strand, 29792153 - 29792304
Alignment:
Q  90 tcgatgacccgaaaagaattgacggatattatttattccattaaattttgtaaatgttgggatgcctcggtgattttacaatcttgagtgcaattctaga 189  Q
    |||||||| |||||||||||||||||||| |||| | | |||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  29792153 tcgatgactcgaaaagaattgacggatataatttgtccaattaaattttgtaaatgttgggatgccttggtgattttacgatcttgagtgcaattctaga 29792252  T
Q  190 ctagaattgtcactcaaatatgatatatgagcctgagttttgaaagtattat 241  Q
    || ||||||||||||| ||||||||||||||||||| |||||||| ||||||    
T  29792253 cttgaattgtcactcagatatgatatatgagcctgaattttgaaattattat 29792304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 90 - 240
Target Start/End: Original strand, 29789627 - 29789777
Alignment:
Q  90 tcgatgacccgaaaagaattgacggatattatttattccattaaattttgtaaatgttgggatgcctcggtgattttacaatcttgagtgcaattctaga 189  Q
    |||||||  |||||||||||||||||||| |||| | |||||||||||||||||||||||||||||| ||||||||||| ||||||| ||||||||||||    
T  29789627 tcgatgattcgaaaagaattgacggatataatttgtcccattaaattttgtaaatgttgggatgccttggtgattttacgatcttgaatgcaattctaga 29789726  T
Q  190 ctagaattgtcactcaaatatgatatatgagcctgagttttgaaagtatta 240  Q
    |||||||||||||||| ||||||||||||||| ||| |||||||| |||||    
T  29789727 ctagaattgtcactcagatatgatatatgagcatgaattttgaaattatta 29789777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 90 - 240
Target Start/End: Original strand, 29790249 - 29790399
Alignment:
Q  90 tcgatgacccgaaaagaattgacggatattatttattccattaaattttgtaaatgttgggatgcctcggtgattttacaatcttgagtgcaattctaga 189  Q
    |||||||| |||||||||| ||||||||| |||| | |||||||||||||||||||||||||||||| ||||||||||| ||||||| ||||||||||||    
T  29790249 tcgatgactcgaaaagaatcgacggatataatttgtcccattaaattttgtaaatgttgggatgcctgggtgattttacgatcttgaatgcaattctaga 29790348  T
Q  190 ctagaattgtcactcaaatatgatatatgagcctgagttttgaaagtatta 240  Q
    |||||||||||||||| ||||||||||||||| ||| |||||||| |||||    
T  29790349 ctagaattgtcactcagatatgatatatgagcatgaattttgaaattatta 29790399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 90 - 240
Target Start/End: Original strand, 29791361 - 29791511
Alignment:
Q  90 tcgatgacccgaaaagaattgacggatattatttattccattaaattttgtaaatgttgggatgcctcggtgattttacaatcttgagtgcaattctaga 189  Q
    |||||||| |||||||||||||||||||| || | | |||||||||||||||||||||| ||||||| ||||||||||| ||||||| ||||||||||||    
T  29791361 tcgatgactcgaaaagaattgacggatataatatgtcccattaaattttgtaaatgttgtgatgccttggtgattttacgatcttgaatgcaattctaga 29791460  T
Q  190 ctagaattgtcactcaaatatgatatatgagcctgagttttgaaagtatta 240  Q
    |||||||||||||||| ||||||||||||||||||| |||||||| |||||    
T  29791461 ctagaattgtcactcagatatgatatatgagcctgaattttgaaattatta 29791511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 79 - 240
Target Start/End: Original strand, 29791674 - 29791829
Alignment:
Q  79 cgatgccttgatcgatgacccgaaaagaattgacggatattatttattccattaaattttgtaaatgttgggatgcctcggtgattttacaatcttgagt 178  Q
    |||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||      ||||||||||||||||||||||||||    
T  29791674 cgatgctttgatcgatgacccgaaaagaattgacggatattatttgttccattaaattttgtaaatgt------gcctcggtgattttacaatcttgagt 29791767  T
Q  179 gcaattctagactagaattgtcactcaaatatgatatatgagcctgagttttgaaagtatta 240  Q
    ||||||||||||||||||||||  ||| |||||||||||| |||| |||||| ||| |||||    
T  29791768 gcaattctagactagaattgtccgtcagatatgatatatgggcctaagttttaaaattatta 29791829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 79 - 150
Target Start/End: Original strand, 29789480 - 29789551
Alignment:
Q  79 cgatgccttgatcgatgacccgaaaagaattgacggatattatttattccattaaattttgtaaatgttggg 150  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  29789480 cgatgccttgatcgatgacccgaaaagaattgacggatattatttgttccattaaattttgtaaatgttggg 29789551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 79 - 150
Target Start/End: Original strand, 29790102 - 29790173
Alignment:
Q  79 cgatgccttgatcgatgacccgaaaagaattgacggatattatttattccattaaattttgtaaatgttggg 150  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  29790102 cgatgccttgatcgatgacccaaaaagaattgacggatattatttgttccattaaattttgtaaatgttggg 29790173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 79 - 148
Target Start/End: Original strand, 29791214 - 29791283
Alignment:
Q  79 cgatgccttgatcgatgacccgaaaagaattgacggatattatttattccattaaattttgtaaatgttg 148  Q
    ||||||||||||| |||||||||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  29791214 cgatgccttgatcaatgacccgaaaagaattgaccgatattatttgttccattaaattttgtaaatgttg 29791283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 90 - 167
Target Start/End: Original strand, 29792311 - 29792387
Alignment:
Q  90 tcgatgacccgaaaagaattgacggatattatttattccattaaattttgtaaatgttgggatgcctcggtgatttta 167  Q
    |||||||||||||||||||||||||||||||||| || || ||||||||||||||||||||||||||| |||||||||    
T  29792311 tcgatgacccgaaaagaattgacggatattatttgtt-caataaattttgtaaatgttgggatgcctcagtgatttta 29792387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 90 - 205
Target Start/End: Complemental strand, 40038209 - 40038096
Alignment:
Q  90 tcgatgacccgaaaagaattgacggatattatttattccattaaattttgtaaatgttgggatgcctcggtgattttacaatcttgagtgcaattctaga 189  Q
    ||||||||| |||| ||||||| ||||||||||| ||||| ||||| ||  || |||| ||||||||| |||||||||  ||||||||||||||||||||    
T  40038209 tcgatgacctgaaatgaattgatggatattattt-ttccaataaatgtt--aactgtttggatgcctctgtgattttatcatcttgagtgcaattctaga 40038113  T
Q  190 cta-gaattgtcactca 205  Q
    ||| |||||||||||||    
T  40038112 ctatgaattgtcactca 40038096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 90 - 205
Target Start/End: Complemental strand, 40040311 - 40040198
Alignment:
Q  90 tcgatgacccgaaaagaattgacggatattatttattccattaaattttgtaaatgttgggatgcctcggtgattttacaatcttgagtgcaattctaga 189  Q
    |||||||||||||| ||||||| ||||||||||| ||||| ||||| ||  || |||| ||||||||  |||||||||  ||||||||||||||||||||    
T  40040311 tcgatgacccgaaatgaattgatggatattattt-ttccaataaatgtt--aagtgtttggatgcctttgtgattttatcatcttgagtgcaattctaga 40040215  T
Q  190 cta-gaattgtcactca 205  Q
    ||| |||||||||||||    
T  40040214 ctatgaattgtcactca 40040198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 134 - 241
Target Start/End: Original strand, 29792399 - 29792502
Alignment:
Q  134 attttgtaaatgttgggatgcctcggtgattttacaatcttgagtgcaattctagacta-gaattgtcactcaaatatgatatatgagcctgagttttga 232  Q
    ||||||||| |||||||||||||| |||||||||| |||||||||  |||| ||||||| ||||||||||| ||     |||||||||||||||||||||    
T  29792399 attttgtaagtgttgggatgcctcagtgattttacgatcttgagtttaattttagactatgaattgtcacttaa-----atatatgagcctgagttttga 29792493  T
Q  233 aagtattat 241  Q
    || ||||||    
T  29792494 aattattat 29792502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 90 - 205
Target Start/End: Complemental strand, 40039259 - 40039148
Alignment:
Q  90 tcgatgacccgaaaagaattgacggatattatttattccattaaattttgtaaatgttgggatgcctcggtgattttacaatcttgagtgcaattctaga 189  Q
    |||||||||||||| ||||||| ||||||||||| ||||| ||||| ||    ||||| ||||||||| |||||||||  ||||||||||||||| ||||    
T  40039259 tcgatgacccgaaaggaattgatggatattattt-ttccaataaatgtt----atgtttggatgcctcagtgattttatcatcttgagtgcaattttaga 40039165  T
Q  190 cta-gaattgtcactca 205  Q
    ||| |||||||||||||    
T  40039164 ctatgaattgtcactca 40039148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 134 - 241
Target Start/End: Original strand, 29792566 - 29792678
Alignment:
Q  134 attttgtaaatgttgggatgcctcggtgattttaca--atcttgagtgcaattctagac--ta-gaattgtcactcaaatatgatatatgagcctgagtt 228  Q
    ||||| ||||||||| |||| ||| |||||| || |  |||||||||||||||||||||  || ||||||||||||||||||||||| ||||||||||||    
T  29792566 attttctaaatgttgagatgtctcagtgattatatatgatcttgagtgcaattctagacactatgaattgtcactcaaatatgatatttgagcctgagtt 29792665  T
Q  229 ttgaaagtattat 241  Q
     ||||| ||||||    
T  29792666 ctgaaattattat 29792678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 173 - 241
Target Start/End: Original strand, 29790174 - 29790242
Alignment:
Q  173 ttgagtgcaattctagactagaattgtcactcaaatatgatatatgagcctgagttttgaaagtattat 241  Q
    |||||||||||||||||||||||||| |||||| ||||||||| ||||| || ||||||||| ||||||    
T  29790174 ttgagtgcaattctagactagaattgacactcagatatgatatctgagcatgggttttgaaattattat 29790242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 173 - 241
Target Start/End: Original strand, 29791286 - 29791354
Alignment:
Q  173 ttgagtgcaattctagactagaattgtcactcaaatatgatatatgagcctgagttttgaaagtattat 241  Q
    |||||||||||||||||||||||||||||| || ||||||||| ||||| ||||||||| || ||||||    
T  29791286 ttgagtgcaattctagactagaattgtcacccagatatgatatttgagcatgagttttgtaattattat 29791354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 90 - 205
Target Start/End: Complemental strand, 40042972 - 40042857
Alignment:
Q  90 tcgatgacccgaaaagaattgacggatattatttattccattaaattttgtaaatgttgggatgcctcggtgattttacaatcttgagtgcaattctaga 189  Q
    |||||||||||||| ||||||| ||||||||||| | |||| |||| ||| |  |||| |||||||||  ||||||||  ||||||||||||||||||||    
T  40042972 tcgatgacccgaaaggaattgatggatattatttctcccat-aaatgttgcatgtgtttggatgcctcaatgattttatcatcttgagtgcaattctaga 40042874  T
Q  190 c-tagaattgtcactca 205  Q
    | | |||||||||||||    
T  40042873 ctttgaattgtcactca 40042857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 90 - 205
Target Start/End: Complemental strand, 40042648 - 40042534
Alignment:
Q  90 tcgatgacccgaaaagaattgacggatattatttattccattaaattttgtaaatgttgggatgcctcggtgattttacaatcttgagtgcaattctaga 189  Q
    ||||||||||||||  |||||| ||||||||||| | |||| |||| ||  || |||| ||||||||| |||||||||  ||||||||||||||||||||    
T  40042648 tcgatgacccgaaagaaattgaaggatattatttgtcccat-aaatgtt--aagtgtttggatgcctcagtgattttatcatcttgagtgcaattctaga 40042552  T
Q  190 cta--gaattgtcactca 205  Q
    |||  |||||||||||||    
T  40042551 ctattgaattgtcactca 40042534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 90 - 215
Target Start/End: Complemental strand, 40041531 - 40041406
Alignment:
Q  90 tcgatgacccgaaaagaattgacggatattatttattccattaaattttgtaaatgttgggatgcctcggtgattttacaatcttgagtgcaattctaga 189  Q
    |||||||||||||| ||||||| ||||| ||||| | |||| |||| ||| || |||| ||||||||| | |||||||  ||||||||||||| ||||||    
T  40041531 tcgatgacccgaaaggaattgatggataatatttgtcccat-aaatgttgcaagtgtttggatgcctcagcgattttatcatcttgagtgcaagtctaga 40041433  T
Q  190 c-tagaattgtcactcaaatatgatat 215  Q
    | | ||||||||||||| |||| ||||    
T  40041432 ctttgaattgtcactcatatattatat 40041406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 90 - 215
Target Start/End: Complemental strand, 40042811 - 40042686
Alignment:
Q  90 tcgatgacccgaaaagaattgacggatattatttattccattaaattttgtaaatgttgggatgcctcggtgattttacaatcttgagtgcaattctaga 189  Q
    |||||||||||||| ||||||| ||||||||||| | |||| |||| ||| || |||| ||   |||||| |||||||  ||||||||||||||||||||    
T  40042811 tcgatgacccgaaaggaattgatggatattatttgtcccat-aaatgttgcaagtgtttggtaacctcggcgattttatcatcttgagtgcaattctaga 40042713  T
Q  190 c-tagaattgtcactcaaatatgatat 215  Q
    | | ||||||||||||| |||| ||||    
T  40042712 ctttgaattgtcactcatatattatat 40042686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 133 - 205
Target Start/End: Complemental strand, 40038860 - 40038787
Alignment:
Q  133 aattttgtaaatgttgggatgcctcggtgattttacaatcttgagtgcaattctagacta-gaattgtcactca 205  Q
    |||||||||||| ||||||||| | ||||||||||  ||||||||||||| ||||||||| |||||||||||||    
T  40038860 aattttgtaaatattgggatgctttggtgattttatgatcttgagtgcaagtctagactatgaattgtcactca 40038787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 99 - 215
Target Start/End: Complemental strand, 40039413 - 40039297
Alignment:
Q  99 cgaaaagaattgacggatattatttattccattaaattttgtaaatgttgggatgcctcggtgattttacaatcttgagtgcaattctagacta-gaatt 197  Q
    ||||| ||| ||| ||||||||||| | |||| |||| ||| || || | |||||||||||||||||||  |||||||||||||||||||| || |||||    
T  40039413 cgaaaggaactgatggatattatttgtcccat-aaatgttgcaagtgcttggatgcctcggtgattttattatcttgagtgcaattctagaatatgaatt 40039315  T
Q  198 gtcactcaaatatgatat 215  Q
    |||||||| |||| ||||    
T  40039314 gtcactcatatattatat 40039297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 133 - 205
Target Start/End: Complemental strand, 40042079 - 40042006
Alignment:
Q  133 aattttgtaaatgttgggatgcctcggtgattttacaatcttgagtgcaattctagacta-gaattgtcactca 205  Q
    |||||||||||||||||||||| | ||||||||||  ||| ||||||||| ||||||||| |||||||||||||    
T  40042079 aattttgtaaatgttgggatgctttggtgattttatgatcatgagtgcaagtctagactatgaattgtcactca 40042006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 90 - 191
Target Start/End: Complemental strand, 40042488 - 40042388
Alignment:
Q  90 tcgatgacccgaaaagaattgacggatattatttattccattaaattttgtaaatgttgggatgcctcggtgattttacaatcttgagtgcaattctaga 189  Q
    |||||||||  ||| ||||||| ||||| ||||| | |||| |||| |||||| |||| |||||||||||||||||||  ||||||||||||||| ||||    
T  40042488 tcgatgaccataaaggaattgatggataatatttgtcccat-aaatgttgtaagtgtttggatgcctcggtgattttatcatcttgagtgcaattataga 40042390  T
Q  190 ct 191  Q
    ||    
T  40042389 ct 40042388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 127 - 167
Target Start/End: Original strand, 29792516 - 29792556
Alignment:
Q  127 ccattaaattttgtaaatgttgggatgcctcggtgatttta 167  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  29792516 ccattaaattttgtaaatgttgggatgcctcggtgatttta 29792556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 173 - 240
Target Start/End: Original strand, 29789552 - 29789619
Alignment:
Q  173 ttgagtgcaattctagactagaattgtcactcaaatatgatatatgagcctgagttttgaaagtatta 240  Q
    ||||||||||||||||||||||||||||||| | ||||||||| ||||| | ||||| |||| |||||    
T  29789552 ttgagtgcaattctagactagaattgtcacttagatatgatatctgagcataagtttagaaattatta 29789619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 99 - 215
Target Start/End: Complemental strand, 40038363 - 40038247
Alignment:
Q  99 cgaaaagaattgacggatattatttattccattaaattttgtaaatgttgggatgcctcggtgattttacaatcttgagtgcaattctagacta-gaatt 197  Q
    ||||| ||| ||| ||||||||||| | |||| |||| ||| || |||| || ||||||||||||||||  ||||||||||||||| |||| || |||||    
T  40038363 cgaaaggaactgatggatattatttgtcccat-aaatgttgcaagtgtttgggtgcctcggtgattttatcatcttgagtgcaattttagaatatgaatt 40038265  T
Q  198 gtcactcaaatatgatat 215  Q
    |||||||| |||| ||||    
T  40038264 gtcactcatatattatat 40038247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 133 - 205
Target Start/End: Complemental strand, 40040961 - 40040888
Alignment:
Q  133 aattttgtaaatgttgggatgcctcggtgattttacaatcttgagtgcaattctagacta-gaattgtcactca 205  Q
    |||||||||||| ||||||||| | ||||||||||  ||||||||| ||| ||||||||| |||||||||||||    
T  40040961 aattttgtaaatattgggatgctttggtgattttatgatcttgagtacaagtctagactatgaattgtcactca 40040888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 191
Target Start/End: Complemental strand, 40041368 - 40041268
Alignment:
Q  90 tcgatgacccgaaaagaattgacggatattatttattccattaaattttgtaaatgttgggatgcctcggtgattttacaatcttgagtgcaattctaga 189  Q
    ||||||||||||||  |||||| ||||||||||| | |||| |||| | | ||||||| || ||||| ||| ||||||  ||||||||||||||||||||    
T  40041368 tcgatgacccgaaagaaattgatggatattatttgtcccat-aaatgtggcaaatgtttggttgccttggttattttatcatcttgagtgcaattctaga 40041270  T
Q  190 ct 191  Q
    ||    
T  40041269 ct 40041268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 144 - 215
Target Start/End: Complemental strand, 40041641 - 40041569
Alignment:
Q  144 tgttgggatgcctcggtgattttacaatcttgagtgcaattctagac-tagaattgtcactcaaatatgatat 215  Q
    |||| ||||||||| |||||||||  ||||||||||||||||||||| | ||||||||||||| |||| ||||    
T  40041641 tgtttggatgcctcagtgattttatcatcttgagtgcaattctagactttgaattgtcactcatatattatat 40041569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 113 - 215
Target Start/End: Complemental strand, 40037266 - 40037164
Alignment:
Q  113 ggatattatttattccattaaattttgtaaatgttgggatgcctcggtgattttacaatcttgagtgcaattctagac-tagaattgtcactcaaatatg 211  Q
    ||||||||||| | |||| |||| ||| || |||| ||||||||| |||||||||  ||||||||||||||||||||| | |||||| |||||| ||||     
T  40037266 ggatattatttgtcccat-aaatgttgcaagtgtttggatgcctcagtgattttatcatcttgagtgcaattctagactttgaattgccactcatatatt 40037168  T
Q  212 atat 215  Q
    ||||    
T  40037167 atat 40037164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 90 - 188
Target Start/End: Complemental strand, 40037457 - 40037360
Alignment:
Q  90 tcgatgacccgaaaagaattgacggatattatttattccattaaattttgtaaatgttgggatgcctcggtgattttacaatcttgagtgcaattctag 188  Q
    |||||||| ||||| ||||| | ||||||||||| | |||| |||| ||| || |||| ||||||||  |||||||||  |||||||||||||||||||    
T  40037457 tcgatgactcgaaaggaatttatggatattatttgtgccat-aaatgttgcaattgtttggatgcctaagtgattttatcatcttgagtgcaattctag 40037360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 133 - 201
Target Start/End: Complemental strand, 40039909 - 40039840
Alignment:
Q  133 aattttgtaaatgttgggatgcctcggtgattttacaatcttgagtgcaattctagacta-gaattgtca 201  Q
    ||||||||| || ||||||||| | ||||||||||  ||||||||||||| ||||||||| |||||||||    
T  40039909 aattttgtatatattgggatgctttggtgattttatgatcttgagtgcaagtctagactatgaattgtca 40039840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 146 - 205
Target Start/End: Complemental strand, 40037802 - 40037742
Alignment:
Q  146 ttgggatgcctcggtgattttacaatcttgagtgcaattctagacta-gaattgtcactca 205  Q
    ||||||||| | ||||||||||  ||||||||||||| ||||||||| |||||||||||||    
T  40037802 ttgggatgctttggtgattttatgatcttgagtgcaagtctagactatgaattgtcactca 40037742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 79
Target Start/End: Original strand, 29796479 - 29796515
Alignment:
Q  43 agattattctcagagattccgataggggctagtgatc 79  Q
    ||||||||||||||||||||| |||| ||||||||||    
T  29796479 agattattctcagagattccggtaggagctagtgatc 29796515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 146; Significance: 6e-77; HSPs: 91)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 79 - 240
Target Start/End: Complemental strand, 41134009 - 41133848
Alignment:
Q  79 cgatgccttgatcgatgacccgaaaagaattgacggatattatttattccattaaattttgtaaatgttgggatgcctcggtgattttacaatcttgagt 178  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41134009 cgatgccttgatcgatgacccgaaaagaattgacggatattatttgttccattaaattttgtaaatgttgggatgcctcggtgattttacaatcttgagt 41133910  T
Q  179 gcaattctagactagaattgtcactcaaatatgatatatgagcctgagttttgaaagtatta 240  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||||||||||| |||||    
T  41133909 gcaattctagactagaattgtcactcggatatgatatatgagcctgagttttgaaattatta 41133848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 80 - 240
Target Start/End: Complemental strand, 41130201 - 41130041
Alignment:
Q  80 gatgccttgatcgatgacccgaaaagaattgacggatattatttattccattaaattttgtaaatgttgggatgcctcggtgattttacaatcttgagtg 179  Q
    |||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41130201 gatgccttgatcgatgacccgaaaagaattgacggaaattatttgttccattaaattttgtaaatgttgggatgcctcggtgattttacaatcttgagtg 41130102  T
Q  180 caattctagactagaattgtcactcaaatatgatatatgagcctgagttttgaaagtatta 240  Q
    ||||||||||||| |||||||||||| |||||||||||||||||||||||||||| |||||    
T  41130101 caattctagactaaaattgtcactcagatatgatatatgagcctgagttttgaaattatta 41130041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 139; E-Value: 9e-73
Query Start/End: Original strand, 79 - 241
Target Start/End: Complemental strand, 41135828 - 41135666
Alignment:
Q  79 cgatgccttgatcgatgacccgaaaagaattgacggatattatttattccattaaattttgtaaatgttgggatgcctcggtgattttacaatcttgagt 178  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||    
T  41135828 cgatgctttgatcgatgacccgaaaagaattgacggatattatttattccattaaattttgtaaatgtttggatgcctcggtgattttacgatcttgagt 41135729  T
Q  179 gcaattctagactagaattgtcactcaaatatgatatatgagcctgagttttgaaagtattat 241  Q
    |||||||||||||| |||||||||||| |||||||||||||||||||||||||||| ||||||    
T  41135728 gcaattctagactataattgtcactcagatatgatatatgagcctgagttttgaaattattat 41135666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 79 - 241
Target Start/End: Complemental strand, 41126488 - 41126326
Alignment:
Q  79 cgatgccttgatcgatgacccgaaaagaattgacggatattatttattccattaaattttgtaaatgttgggatgcctcggtgattttacaatcttgagt 178  Q
    |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| |||||||||||||||||||| |||||||||    
T  41126488 cgatgccttgatcgatgacccgaaaagaattgacagatattatttgttccattaaattttgtaaatgtttggatgcctcggtgattttacgatcttgagt 41126389  T
Q  179 gcaattctagactagaattgtcactcaaatatgatatatgagcctgagttttgaaagtattat 241  Q
    ||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| ||||||    
T  41126388 gcaattctagactagaattgtcactcagatatgatatatgagactgagttttgaaattattat 41126326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 79 - 240
Target Start/End: Complemental strand, 41130040 - 41129879
Alignment:
Q  79 cgatgccttgatcgatgacccgaaaagaattgacggatattatttattccattaaattttgtaaatgttgggatgcctcggtgattttacaatcttgagt 178  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| || ||||||||||||||||||||    
T  41130040 cgatgccttgatcgatgacccgaaaagaattgacggatattattttttccattaaatattgtaaatgttgggatgcatctgtgattttacaatcttgagt 41129941  T
Q  179 gcaattctagactagaattgtcactcaaatatgatatatgagcctgagttttgaaagtatta 240  Q
    |||||||||||||| |||||||||||| |||||||||||||||||||||||||||| |||||    
T  41129940 gcaattctagactaaaattgtcactcagatatgatatatgagcctgagttttgaaattatta 41129879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 79 - 240
Target Start/End: Complemental strand, 41130526 - 41130365
Alignment:
Q  79 cgatgccttgatcgatgacccgaaaagaattgacggatattatttattccattaaattttgtaaatgttgggatgcctcggtgattttacaatcttgagt 178  Q
    |||||||||||||||||||||||||||||||||| |||||||||  |||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  41130526 cgatgccttgatcgatgacccgaaaagaattgacagatattattcgttccattaaattttgtaaattttgggatgcctcggtgattttacaatcttgagt 41130427  T
Q  179 gcaattctagactagaattgtcactcaaatatgatatatgagcctgagttttgaaagtatta 240  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||||||||||| |||||    
T  41130426 gcaattctagactagaattgtcactcggatatgatatatgagcctgagttttgaaattatta 41130365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 80 - 240
Target Start/End: Complemental strand, 41135989 - 41135829
Alignment:
Q  80 gatgccttgatcgatgacccgaaaagaattgacggatattatttattccattaaattttgtaaatgttgggatgcctcggtgattttacaatcttgagtg 179  Q
    |||||||||||||||||||| ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  41135989 gatgccttgatcgatgacccaaaaagaattgacggatattatttgttccattacattttgtaaatgttgggatgcctcggtgattttacaatcttgagtg 41135890  T
Q  180 caattctagactagaattgtcactcaaatatgatatatgagcctgagttttgaaagtatta 240  Q
    ||||||| ||||| |||||||||||| |||||||||||||||||||||||||||| |||||    
T  41135889 caattcttgactaaaattgtcactcagatatgatatatgagcctgagttttgaaattatta 41135829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 79 - 240
Target Start/End: Complemental strand, 41126651 - 41126489
Alignment:
Q  79 cgatgccttgatcgatgacccgaaaagaattgacggatatt-atttattccattaaattttgtaaatgttgggatgcctcggtgattttacaatcttgag 177  Q
    |||||| |||||||||||||||||||||||||||||||||| |||  |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41126651 cgatgctttgatcgatgacccgaaaagaattgacggatatttattcgttccattaaattttgtaaatgttgggatgcctcggtgattttacaatcttgag 41126552  T
Q  178 tgcaattctagactagaattgtcactcaaatatgatatatgagcctgagttttgaaagtatta 240  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||||||||||| |||||    
T  41126551 tgcaattctagactagaattgtcactcggatatgatatatgagcctgagttttgaaattatta 41126489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 80 - 240
Target Start/End: Complemental strand, 41131011 - 41130851
Alignment:
Q  80 gatgccttgatcgatgacccgaaaagaattgacggatattatttattccattaaattttgtaaatgttgggatgcctcggtgattttacaatcttgagtg 179  Q
    ||||||||| ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  41131011 gatgccttggtcgatgacccgaaaagaattgacagatattatttgttccattaaattttgtaaatgtttggatgcctcggtgattttacgatcttgagtg 41130912  T
Q  180 caattctagactagaattgtcactcaaatatgatatatgagcctgagttttgaaagtatta 240  Q
    |||||||||||||||||||||||||| |||||||||||||||| ||||||||||| |||||    
T  41130911 caattctagactagaattgtcactcagatatgatatatgagcccgagttttgaaattatta 41130851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 79 - 241
Target Start/End: Complemental strand, 41130364 - 41130202
Alignment:
Q  79 cgatgccttgatcgatgacccgaaaagaattgacggatattatttattccattaaattttgtaaatgttgggatgcctcggtgattttacaatcttgagt 178  Q
    ||||| |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| |||||  ||||||||||||| |||||||||    
T  41130364 cgatgtcttgatcgatgacccgaaaagaattgacagatattatttgttccattaaattttgtaaatgttaggatgagtcggtgattttacgatcttgagt 41130265  T
Q  179 gcaattctagactagaattgtcactcaaatatgatatatgagcctgagttttgaaagtattat 241  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  41130264 gcaattctagactagaattgtcactcagatatgatatatgagcctgagttttgaaattattat 41130202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 86 - 240
Target Start/End: Complemental strand, 41130843 - 41130689
Alignment:
Q  86 ttgatcgatgacccgaaaagaattgacggatattatttattccattaaattttgtaaatgttgggatgcctcggtgattttacaatcttgagtgcaattc 185  Q
    ||||||||||||| |||||||||| ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41130843 ttgatcgatgaccagaaaagaattaacggaaattatttgttccattaaattttgtaaatgttgggatgcctcggtgattttacaatcttgagtgcaattc 41130744  T
Q  186 tagactagaattgtcactcaaatatgatatatgagcctgagttttgaaagtatta 240  Q
    ||||||| |||||||||||| |||||||||||||||||||||||||||| |||||    
T  41130743 tagactaaaattgtcactcagatatgatatatgagcctgagttttgaaattatta 41130689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 79 - 240
Target Start/End: Complemental strand, 41130688 - 41130527
Alignment:
Q  79 cgatgccttgatcgatgacccgaaaagaattgacggatattatttattccattaaattttgtaaatgttgggatgcctcggtgattttacaatcttgagt 178  Q
    |||||||||||||||| |||||||||||||||| ||| ||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  41130688 cgatgccttgatcgattacccgaaaagaattgatggaaattatttgttccattaaattttgtaaatgttgggatgtctcggtgattttacaatcttgagt 41130589  T
Q  179 gcaattctagactagaattgtcactcaaatatgatatatgagcctgagttttgaaagtatta 240  Q
    |||||||||||||| |||||||||||| ||||||||||| |||||||||||||||| |||||    
T  41130588 gcaattctagactaaaattgtcactcagatatgatatataagcctgagttttgaaattatta 41130527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 80 - 241
Target Start/End: Complemental strand, 41136308 - 41136147
Alignment:
Q  80 gatgccttgatcgatgacccgaaaagaattgacggatattatttattccattaaattttgtaaatgttgggatgcctcggtgattttacaatcttgagtg 179  Q
    |||||||||||||||||||| |||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41136308 gatgccttgatcgatgacccaaaaataattgacggatattatttgttccattaaattttgtaaatgttgggatgcctcggtgattttacaatcttgagtg 41136209  T
Q  180 caattctagactagaattgtcactcaaatatgatatatgagcctgagttttgaaagtattat 241  Q
    ||| ||||||||||||||||| |||| ||||||||||||||| | |||||||||| ||||||    
T  41136208 caaatctagactagaattgtctctcagatatgatatatgagcttaagttttgaaattattat 41136147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 79 - 241
Target Start/End: Complemental strand, 41133847 - 41133685
Alignment:
Q  79 cgatgccttgatcgatgacccgaaaagaattgacggatattatttattccattaaattttgtaaatgttgggatgcctcggtgattttacaatcttgagt 178  Q
    |||||||||||||||||||| |||||||||||||  ||||||||| ||||||||||||||||||||||| |||||||||||||||||||| || ||||||    
T  41133847 cgatgccttgatcgatgacctgaaaagaattgacatatattatttgttccattaaattttgtaaatgtttggatgcctcggtgattttacgatattgagt 41133748  T
Q  179 gcaattctagactagaattgtcactcaaatatgatatatgagcctgagttttgaaagtattat 241  Q
    ||||||||||||||||||||||||| | |||||||||||||||||||||||||| | ||||||    
T  41133747 gcaattctagactagaattgtcacttagatatgatatatgagcctgagttttgagattattat 41133685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 80 - 241
Target Start/End: Complemental strand, 41136146 - 41135990
Alignment:
Q  80 gatgccttgatcgatgacccgaaaagaattgacggatattatttattccattaaattttgtaaatgttgggatgcctcggtgattttacaatcttgagtg 179  Q
    |||||||||||| ||||||||||||||||     |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41136146 gatgccttgatccatgacccgaaaagaat-----gatattatttgttccattaaattttgtaaatgttgggatgcctcggtgattttacaatcttgagtg 41136052  T
Q  180 caattctagactagaattgtcactcaaatatgatatatgagcctgagttttgaaagtattat 241  Q
    ||||||||||||||||||||||||   |||||||||| ||||||||||||||||| ||||||    
T  41136051 caattctagactagaattgtcacttggatatgatatacgagcctgagttttgaaattattat 41135990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 90 - 241
Target Start/End: Complemental strand, 41126161 - 41126010
Alignment:
Q  90 tcgatgacccgaaaagaattgacggatattatttattccattaaattttgtaaatgttgggatgcctcggtgattttacaatcttgagtgcaattctaga 189  Q
    |||||||||||||||||||||| || |||||||| |||||||||||||||||||||||||||||||| ||||||||||| ||||||| ||||||||||||    
T  41126161 tcgatgacccgaaaagaattgatgggtattatttgttccattaaattttgtaaatgttgggatgccttggtgattttacgatcttgattgcaattctaga 41126062  T
Q  190 ctagaattgtcactcaaatatgatatatgagcctgagttttgaaagtattat 241  Q
    ||||||||||| |||| ||||||||||||||||||| |||||||| ||||||    
T  41126061 ctagaattgtcgctcagatatgatatatgagcctgaattttgaaattattat 41126010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 100 - 240
Target Start/End: Complemental strand, 41131153 - 41131013
Alignment:
Q  100 gaaaagaattgacggatattatttattccattaaattttgtaaatgttgggatgcctcggtgattttacaatcttgagtgcaattctagactagaattgt 199  Q
    ||||| |||||||||||||||||  |||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| ||||||||    
T  41131153 gaaaaaaattgacggatattattcgttccattaaattttgtaaatgttgggttgcgtcggtgattttacaatcttgagtgcaattctagaccagaattgt 41131054  T
Q  200 cactcaaatatgatatatgagcctgagttttgaaagtatta 240  Q
    |||||  |||||||||||||||||||||||||||| |||||    
T  41131053 cactcggatatgatatatgagcctgagttttgaaattatta 41131013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 90 - 241
Target Start/End: Complemental strand, 41126319 - 41126168
Alignment:
Q  90 tcgatgacccgaaaagaattgacggatattatttattccattaaattttgtaaatgttgggatgcctcggtgattttacaatcttgagtgcaattctaga 189  Q
    |||||||||||||||||||||| |||||| |||| | |||||||||||||||||||||||||||||| ||||||||||| ||||||| ||||||| ||||    
T  41126319 tcgatgacccgaaaagaattgatggatataatttgtcccattaaattttgtaaatgttgggatgccttggtgattttacgatcttgattgcaattttaga 41126220  T
Q  190 ctagaattgtcactcaaatatgatatatgagcctgagttttgaaagtattat 241  Q
    ||||||||||| |||| ||||||||||||||||||| |||||||| ||||||    
T  41126219 ctagaattgtcgctcagatatgatatatgagcctgaattttgaaattattat 41126168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 90 - 225
Target Start/End: Complemental strand, 41135659 - 41135524
Alignment:
Q  90 tcgatgacccgaaaagaattgacggatattatttattccattaaattttgtaaatgttgggatgcctcggtgattttacaatcttgagtgcaattctaga 189  Q
    ||||||||||||||||||||||||||||| |||| ||||||| |||||||||||||||||||||||  | ||||||||| ||||||||||||||||||||    
T  41135659 tcgatgacccgaaaagaattgacggatataatttgttccattgaattttgtaaatgttgggatgccctgttgattttacgatcttgagtgcaattctaga 41135560  T
Q  190 ctagaattgtcactcaaatatgatatatgagcctga 225  Q
    ||||||||||| |||| |||||||||| ||||||||    
T  41135559 ctagaattgtcgctcagatatgatatacgagcctga 41135524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 85 - 199
Target Start/End: Complemental strand, 41136423 - 41136310
Alignment:
Q  85 cttgatcgatgacccgaaaagaattgacggatattatttattccattaaattttgtaaatgttgggatgcctcggtgattttacaatcttgagtgcaatt 184  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||    
T  41136423 cttgatcgatgacccgaaaagaattgacggatattatttgttccattaaattt-gtaaatgttgggatgcctcggtgattttacaatcttaagtgcaatt 41136325  T
Q  185 ctagactagaattgt 199  Q
    |||||||| ||||||    
T  41136324 ctagactacaattgt 41136310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 90 - 241
Target Start/End: Complemental strand, 41133678 - 41133531
Alignment:
Q  90 tcgatgacccgaaaagaattgacggatattatttattccattaaattttgtaaatgttgggatgcctcggtgattttacaatcttgagtgcaattctaga 189  Q
    ||||||||||||||| ||||||||||||| |||| | ||||| |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  41133678 tcgatgacccgaaaataattgacggatataatttgtcccattgaattttgtaaatgttgggatgccttggtgattttacgatcttgagtgcaattctaga 41133579  T
Q  190 cta-gaattgtcactcaaatatgatatatgagcctgagttttgaaagtattat 241  Q
    ||| ||||||||||||||     ||||||||||||||||||||||| ||||||    
T  41133578 ctatgaattgtcactcaa-----atatatgagcctgagttttgaaattattat 41133531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 134 - 241
Target Start/End: Complemental strand, 41129188 - 41129085
Alignment:
Q  134 attttgtaaatgttgggatgcctcggtgattttacaatcttgagtgcaattctagacta-gaattgtcactcaaatatgatatatgagcctgagttttga 232  Q
    |||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| ||||||||||||||     |||||||||||||||||||||    
T  41129188 attttgtaaatgttgggatgcctcagtgattttacgatcttgagtgcaattctagactatgaattgtcactcaa-----atatatgagcctgagttttga 41129094  T
Q  233 aagtattat 241  Q
    || ||||||    
T  41129093 aattattat 41129085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 152 - 234
Target Start/End: Complemental strand, 34091114 - 34091031
Alignment:
Q  152 tgcctcggtgattttacaatcttgagtgcaattctagacta-gaattgtcactcaaatatgatatatgagcctgagttttgaaa 234  Q
    ||||||||||||||||  ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  34091114 tgcctcggtgattttatgatcttgagtgcaattctagactatgaattgtcactcaaatatgatatatgagcctgagttttgaaa 34091031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 130 - 241
Target Start/End: Complemental strand, 41136535 - 41136429
Alignment:
Q  130 ttaaattttgtaaatgttgggatgcctcggtgattttacaatcttgagtgcaattctagactagaattgtcactcaaatatgatatatgagcctgagttt 229  Q
    |||||||||||||||     ||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| |||| ||||||||    
T  41136535 ttaaattttgtaaat-----gatgcctaggtgattttacaatcttgagtgcaattctagactagaattgtcactcatatattatatctgagtctgagttt 41136441  T
Q  230 tgaaagtattat 241  Q
    ||||| ||||||    
T  41136440 tgaaattattat 41136429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 90 - 241
Target Start/End: Original strand, 31234142 - 31234291
Alignment:
Q  90 tcgatgacccgaaaagaattgacggatattatttattccattaaattttgtaaatgttgggatgcctcggtgattttacaatcttgagtgcaattctaga 189  Q
    ||||||||||||||  |||||||||||||||||| | ||||   || |||| | ||||||||||||||  ||||||||  |||||||||||||||||| |    
T  31234142 tcgatgacccgaaagaaattgacggatattatttgtcccat---atattgtcagtgttgggatgcctcaatgattttatgatcttgagtgcaattctata 31234238  T
Q  190 cta-gaattgtcactcaaatatgatatatgagcctgagttttgaaagtattat 241  Q
    ||| ||||||||||||| ||||||||||||||||| | |||||||| ||||||    
T  31234239 ctatgaattgtcactcatatatgatatatgagcctaaattttgaaactattat 31234291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 149 - 234
Target Start/End: Complemental strand, 34093572 - 34093486
Alignment:
Q  149 ggatgcctcggtgattttacaatcttgagtgcaattctagacta-gaattgtcactcaaatatgatatatgagcctgagttttgaaa 234  Q
    |||||||||||||||||||  ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||    
T  34093572 ggatgcctcggtgattttatgatcttgagtgcaattctagactatgaattgtcactcaaatatgatgtatgagcctgagttttgaaa 34093486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 136 - 241
Target Start/End: Complemental strand, 34093893 - 34093787
Alignment:
Q  136 tttgtaaatgttgggatgcctcggtgattttacaatcttgagtgcaattctagacta-gaattgtcactcaaatatgatatatgagcctgagttttgaaa 234  Q
    ||||||||  ||||||||||||||||||||||  ||||||||||||||||||||||| | ||||||||||| |||||||||||||| |||||||||||||    
T  34093893 tttgtaaacattgggatgcctcggtgattttatgatcttgagtgcaattctagactatgtattgtcactcagatatgatatatgagactgagttttgaaa 34093794  T
Q  235 gtattat 241  Q
     ||||||    
T  34093793 ttattat 34093787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 149 - 241
Target Start/End: Complemental strand, 34091912 - 34091819
Alignment:
Q  149 ggatgcctcggtgattttacaatcttgagtgcaattctagacta-gaattgtcactcaaatatgatatatgagcctgagttttgaaagtattat 241  Q
    |||||||||||||||||||  || |||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  34091912 ggatgcctcggtgattttatgatattgagtgcaattctagactatgaattgtcactcagatatgatatatgagcctgagttttgaaattattat 34091819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 134 - 241
Target Start/End: Original strand, 31233559 - 31233667
Alignment:
Q  134 attttgtaaatgttgggatgcctcggtgattttacaatcttgagtgcaattctagac-tagaattgtcactcaaatatgatatatgagcctgagttttga 232  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||| || | ||||||||||||| ||||||||||||||||| |  |||||    
T  31233559 attttgtaaatgttgggatgcctcggtgattttatgatcttgagtgcaattctatactttgaattgtcactcatatatgatatatgagcctaaactttga 31233658  T
Q  233 aagtattat 241  Q
    || ||||||    
T  31233659 aactattat 31233667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 134 - 241
Target Start/End: Complemental strand, 34090812 - 34090703
Alignment:
Q  134 attttgtaaatgttgggatgcctcggtgattttacaatcttgagtgcaattctagacta-gaattgtcactcaaatatg--atatatgagcctgagtttt 230  Q
    ||||||||||| |||| |||||||||||||||||| ||||||| ||||||||||||||| ||||||||||||| |||||  |||||||||||||||||||    
T  34090812 attttgtaaattttgg-atgcctcggtgattttacgatcttgaatgcaattctagactatgaattgtcactcagatatgatatatatgagcctgagtttt 34090714  T
Q  231 gaaagtattat 241  Q
    |||| ||||||    
T  34090713 gaaattattat 34090703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 134 - 241
Target Start/End: Complemental strand, 41128991 - 41128881
Alignment:
Q  134 attttgtaaatgttgggatgcctcggtgattttaca--atcttgagtgcaattctagacta-gaattgtcactcaaatatgatatatgagcctgagtttt 230  Q
    ||||| ||||||||| |||| ||| |||||| || |  ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  41128991 attttctaaatgttgagatgtctcagtgattatatatgatcttgagtgcaattctagactatgaattgtcactcaaatatgatatatgagcctgagtttt 41128892  T
Q  231 gaaagtattat 241  Q
    |||| ||||||    
T  41128891 gaaattattat 41128881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 90 - 241
Target Start/End: Original strand, 31235073 - 31235222
Alignment:
Q  90 tcgatgacccgaaaagaattgacggatattatttattccattaaattttgtaaatgttgggatgcctcggtgattttacaatcttgagtgcaattctaga 189  Q
    ||||||||||| || ||||||||||||||||||| | ||||   || |||  | ||||||||||||||  ||||||||  |||||||||||||||||| |    
T  31235073 tcgatgacccgtaaggaattgacggatattatttgtcccat---atgttgccagtgttgggatgcctcaatgattttatgatcttgagtgcaattctata 31235169  T
Q  190 cta-gaattgtcactcaaatatgatatatgagcctgagttttgaaagtattat 241  Q
    ||| ||||||||||||| ||||||||||||||||| | |||||||| ||||||    
T  31235170 ctatgaattgtcactcatatatgatatatgagcctaaattttgaaactattat 31235222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 90 - 241
Target Start/End: Original strand, 31235487 - 31235636
Alignment:
Q  90 tcgatgacccgaaaagaattgacggatattatttattccattaaattttgtaaatgttgggatgcctcggtgattttacaatcttgagtgcaattctaga 189  Q
    |||||||||||||| ||||||||||||||||||| | ||||   || ||| || ||||||||||||||||||||||||  || |||| |||||||||| |    
T  31235487 tcgatgacccgaaaggaattgacggatattatttgtaccat---atgttgcaagtgttgggatgcctcggtgattttatgatattgattgcaattctata 31235583  T
Q  190 cta-gaattgtcactcaaatatgatatatgagcctgagttttgaaagtattat 241  Q
     || ||||||||||||| ||||||||||||||| | | |||||||| ||||||    
T  31235584 atatgaattgtcactcatatatgatatatgagcttaaattttgaaactattat 31235636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 90 - 241
Target Start/End: Original strand, 31236111 - 31236260
Alignment:
Q  90 tcgatgacccgaaaagaattgacggatattatttattccattaaattttgtaaatgttgggatgcctcggtgattttacaatcttgagtgcaattctaga 189  Q
    |||||||||||||| |||||||||||| |||||| | ||||   || ||| || ||||||||||||||  ||||||||  |||| ||||||||||||| |    
T  31236111 tcgatgacccgaaaggaattgacggattttatttgtcccat---atgttgcaagtgttgggatgcctcaatgattttatgatctagagtgcaattctata 31236207  T
Q  190 cta-gaattgtcactcaaatatgatatatgagcctgagttttgaaagtattat 241  Q
    ||| ||||||||||||| ||||||||||||||||| | |||||||| ||||||    
T  31236208 ctatgaattgtcactcatatatgatatatgagcctaaattttgaaactattat 31236260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 90 - 241
Target Start/End: Original strand, 31236735 - 31236884
Alignment:
Q  90 tcgatgacccgaaaagaattgacggatattatttattccattaaattttgtaaatgttgggatgcctcggtgattttacaatcttgagtgcaattctaga 189  Q
    |||||||||||||| ||||||||||||||||||| | ||||   || ||| || |||||||||| |||  ||||||||  |||| ||||||||||||| |    
T  31236735 tcgatgacccgaaaggaattgacggatattatttgtcccat---atgttgcaagtgttgggatggctcaatgattttatgatctagagtgcaattctata 31236831  T
Q  190 cta-gaattgtcactcaaatatgatatatgagcctgagttttgaaagtattat 241  Q
    ||| ||||||||||||| ||||||||||||||||| | |||||||| ||||||    
T  31236832 ctatgaattgtcactcatatatgatatatgagcctaaattttgaaactattat 31236884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 134 - 222
Target Start/End: Complemental strand, 34091261 - 34091172
Alignment:
Q  134 attttgtaaatgttgggatgcctcggtgattttacaatcttgagtgcaattctagacta-gaattgtcactcaaatatgatatatgagcc 222  Q
    |||||||||| |||||||||||||||||||||||  |||||| ||||||||||| |||| ||||||||||||||||||||||||||||||    
T  34091261 attttgtaaacgttgggatgcctcggtgattttatgatcttgcgtgcaattctaaactatgaattgtcactcaaatatgatatatgagcc 34091172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 149 - 241
Target Start/End: Complemental strand, 34092231 - 34092138
Alignment:
Q  149 ggatgcctcggtgattttacaatcttgagtgcaattctagacta-gaattgtcactcaaatatgatatatgagcctgagttttgaaagtattat 241  Q
    ||||| |||||||||||||  ||||||||||||||||||||||| ||||||||||||| |||||||||||||||| ||||||||||| ||||||    
T  34092231 ggatgtctcggtgattttatgatcttgagtgcaattctagactatgaattgtcactcagatatgatatatgagccagagttttgaaattattat 34092138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 90 - 241
Target Start/End: Original strand, 31233831 - 31233979
Alignment:
Q  90 tcgatgacccgaaaagaattgacggatattatttattccattaaattttgtaaatgttgggatgcctcggtgattttacaatcttgagtgcaattctaga 189  Q
    |||||||||||||| ||||||||||||||||||| | ||||    ||||| || ||||||||||||||  || |||||  |||||||||||||||||| |    
T  31233831 tcgatgacccgaaaggaattgacggatattatttgtcccat----ttttgcaagtgttgggatgcctcaatgtttttatgatcttgagtgcaattctata 31233926  T
Q  190 cta-gaattgtcactcaaatatgatatatgagcctgagttttgaaagtattat 241  Q
    |||  ||||||||| || ||||||||||||||||| | |||||||| ||||||    
T  31233927 ctattaattgtcacccatatatgatatatgagcctaaattttgaaactattat 31233979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 90 - 234
Target Start/End: Original strand, 31235955 - 31236097
Alignment:
Q  90 tcgatgacccgaaaagaattgacggatattatttattccattaaattttgtaaatgttgggatgcctcggtgattttacaatcttgagtgcaattctaga 189  Q
    ||||||||||||||  |||||||||||||||||| | ||||   || ||| || ||||||||||||||  ||||||||  |||| ||||||||||||| |    
T  31235955 tcgatgacccgaaagaaattgacggatattatttgtcccat---atgttgcaactgttgggatgcctcaatgattttatgatctagagtgcaattctata 31236051  T
Q  190 cta-gaattgtcactcaaatatgatatatgagcctgagttttgaaa 234  Q
    ||| ||||||||||||| ||||||||||||||||| | ||||||||    
T  31236052 ctatgaattgtcactcatatatgatatatgagcctaaattttgaaa 31236097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 93 - 241
Target Start/End: Original strand, 31236894 - 31237040
Alignment:
Q  93 atgacccgaaaagaattgacggatattatttattccattaaattttgtaaatgttgggatgcctcggtgattttacaatcttgagtgcaattctagacta 192  Q
    ||||||||||| ||||||||||||||||||| | ||||   || |||  | ||||||||||||||  ||||||||  |||||||||| ||||||| ||||    
T  31236894 atgacccgaaaggaattgacggatattatttgtcccat---atgttgctagtgttgggatgcctcaatgattttatgatcttgagtggaattctatacta 31236990  T
Q  193 -gaattgtcactcaaatatgatatatgagcctgagttttgaaagtattat 241  Q
     ||||||||||||| ||||||||||||||||| | |||||||| ||||||    
T  31236991 tgaattgtcactcatatatgatatatgagcctaaattttgaaactattat 31237040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 134 - 241
Target Start/End: Complemental strand, 41133437 - 41133327
Alignment:
Q  134 attttgtaaatgttgggatgcctcggtgattttaca--atcttgagtgcaattctagacta-gaattgtcactcaaatatgatatatgagcctgagtttt 230  Q
    ||||| ||||||||| |||| ||| |||||| || |  ||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||    
T  41133437 attttctaaatgttgagatgtctcagtgattatatatgatcttgagtgcaattctagactatgaattgtcactcaaatatgatatatgagtctgagtttt 41133338  T
Q  231 gaaagtattat 241  Q
    |||| ||||||    
T  41133337 gaaattattat 41133327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 90 - 241
Target Start/End: Original strand, 31236267 - 31236416
Alignment:
Q  90 tcgatgacccgaaaagaattgacggatattatttattccattaaattttgtaaatgttgggatgcctcggtgattttacaatcttgagtgcaattctaga 189  Q
    |||||||||||||| |||||||||||| |||||| | ||||   || ||| || |||||||||| |||  ||||||||  |||| ||||||||||||| |    
T  31236267 tcgatgacccgaaaggaattgacggattttatttgtcccat---atgttgcaagtgttgggatggctcaatgattttatgatctagagtgcaattctata 31236363  T
Q  190 cta-gaattgtcactcaaatatgatatatgagcctgagttttgaaagtattat 241  Q
    ||| ||||||||||||| ||||||||||||||||| | |||||||| ||||||    
T  31236364 ctatgaattgtcactcatatatgatatatgagcctaaattttgaaactattat 31236416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 90 - 241
Target Start/End: Original strand, 31236423 - 31236572
Alignment:
Q  90 tcgatgacccgaaaagaattgacggatattatttattccattaaattttgtaaatgttgggatgcctcggtgattttacaatcttgagtgcaattctaga 189  Q
    ||||||||| |||| ||||||||||||||||||| | ||||   || |||  | ||||||||||||||  ||||||||  |||| ||||||||||||| |    
T  31236423 tcgatgacctgaaaggaattgacggatattatttgtcccat---atgttgccagtgttgggatgcctcaatgattttatgatctagagtgcaattctata 31236519  T
Q  190 cta-gaattgtcactcaaatatgatatatgagcctgagttttgaaagtattat 241  Q
    ||| ||||||||||||| ||||||||||||||||| | |||||||| ||||||    
T  31236520 ctatgaattgtcactcatatatgatatatgagcctaaattttgaaactattat 31236572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 90 - 241
Target Start/End: Original strand, 31233674 - 31233824
Alignment:
Q  90 tcgatgacccgaaaagaattgacggatattatttattccattaaattttgtaaatgttgggatgcctcggtgattttacaatcttgagtgcaattctaga 189  Q
    |||||||||||||| ||||||||||||||||||| | ||||  |  || | || ||||||||||||||  ||||||||  |||||||||||||||||| |    
T  31233674 tcgatgacccgaaaggaattgacggatattatttgtcccat--atgttggcaagtgttgggatgcctcaatgattttatgatcttgagtgcaattctata 31233771  T
Q  190 cta-gaattgtcactcaaatatgatatatgagcctgagttttgaaagtattat 241  Q
    ||| ||||||||||||| ||||||||||| ||| | | |||||||| ||||||    
T  31233772 ctatgaattgtcactcatatatgatatataagcttaaattttgaaactattat 31233824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 90 - 167
Target Start/End: Complemental strand, 34091482 - 34091405
Alignment:
Q  90 tcgatgacccgaaaagaattgacggatattatttattccattaaattttgtaaatgttgggatgcctcggtgatttta 167  Q
    |||||||||||||||||||||||||||||||||| | | ||||||||||||||||||| ||||||||| |||||||||    
T  34091482 tcgatgacccgaaaagaattgacggatattatttgtcctattaaattttgtaaatgtttggatgcctcagtgatttta 34091405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 149 - 241
Target Start/End: Complemental strand, 34094084 - 34093991
Alignment:
Q  149 ggatgcctcggtgattttacaatcttgagtgcaattctagacta-gaattgtcactcaaatatgatatatgagcctgagttttgaaagtattat 241  Q
    |||||||||||||||||||  |||||||||||||||||| |||| ||||||||||||| |||||||||||||||  ||||||||||| ||||||    
T  34094084 ggatgcctcggtgattttatgatcttgagtgcaattctaaactatgaattgtcactcagatatgatatatgagcaagagttttgaaattattat 34093991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 92 - 167
Target Start/End: Complemental strand, 34093109 - 34093034
Alignment:
Q  92 gatgacccgaaaagaattgacggatattatttattccattaaattttgtaaatgttgggatgcctcggtgatttta 167  Q
    |||||||||||||||||||||||||||||||| | | |||||||||||| |||||| |||||||||||||||||||    
T  34093109 gatgacccgaaaagaattgacggatattatttgtcctattaaattttgttaatgtttggatgcctcggtgatttta 34093034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 92 - 167
Target Start/End: Complemental strand, 34093982 - 34093907
Alignment:
Q  92 gatgacccgaaaagaattgacggatattatttattccattaaattttgtaaatgttgggatgcctcggtgatttta 167  Q
    |||||||||||||||||||||||||||||||| | | |||||||||||| |||||| |||||||||||||||||||    
T  34093982 gatgacccgaaaagaattgacggatattatttgtcctattaaattttgttaatgtttggatgcctcggtgatttta 34093907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 90 - 241
Target Start/End: Original strand, 31234449 - 31234598
Alignment:
Q  90 tcgatgacccgaaaagaattgacggatattatttattccattaaattttgtaaatgttgggatgcctcggtgattttacaatcttgagtgcaattctaga 189  Q
    |||||||||| ||| ||||||||||||||||||| | ||||   || |||  | |||||||||| |||  ||||||||  |||| ||||||||||||| |    
T  31234449 tcgatgacccaaaaggaattgacggatattatttgtcccat---atgttgctagtgttgggatgactcaatgattttatgatctagagtgcaattctata 31234545  T
Q  190 cta-gaattgtcactcaaatatgatatatgagcctgagttttgaaagtattat 241  Q
    ||| ||||||||||||| ||||||||||||||||| | |||||||| ||||||    
T  31234546 ctatgaattgtcactcatatatgatatatgagcctaaattttgaaactattat 31234598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 90 - 241
Target Start/End: Original strand, 31236579 - 31236728
Alignment:
Q  90 tcgatgacccgaaaagaattgacggatattatttattccattaaattttgtaaatgttgggatgcctcggtgattttacaatcttgagtgcaattctaga 189  Q
    |||||||||||||| ||||||||| || |||||| | ||||   || ||| || ||||||||||||||  ||||||||  |||| ||||||||||||  |    
T  31236579 tcgatgacccgaaaggaattgacgtattttatttgtcccat---atgttgcaagtgttgggatgcctcaatgattttatgatctagagtgcaattctcta 31236675  T
Q  190 cta-gaattgtcactcaaatatgatatatgagcctgagttttgaaagtattat 241  Q
    ||| ||||||||||||| ||||||||||||||||| | |||||||| ||||||    
T  31236676 ctatgaattgtcactcatatatgatatatgagcctaaattttgaaactattat 31236728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 90 - 241
Target Start/End: Original strand, 31237047 - 31237196
Alignment:
Q  90 tcgatgacccgaaaagaattgacggatattatttattccattaaattttgtaaatgttgggatgcctcggtgattttacaatcttgagtgcaattctaga 189  Q
    ||||||| |||||| ||||||||||||||||||| | ||||   || ||| || |||| |||||||||  ||||||||| || | ||||| ||||||| |    
T  31237047 tcgatgatccgaaaggaattgacggatattatttgtcccat---atgttgcaagtgttcggatgcctcaatgattttacgatatagagtgtaattctata 31237143  T
Q  190 cta-gaattgtcactcaaatatgatatatgagcctgagttttgaaagtattat 241  Q
    ||| ||||||||||||| ||||||||||||||||| | |||||||| ||||||    
T  31237144 ctatgaattgtcactcatatatgatatatgagcctaaattttgaaactattat 31237196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 149 - 241
Target Start/End: Complemental strand, 34091582 - 34091489
Alignment:
Q  149 ggatgcctcggtgattttacaatcttgagtgcaattctagacta-gaattgtcactcaaatatgatatatgagcctgagttttgaaagtattat 241  Q
    ||||||||| |||||||||  ||||||||||||||||||||||| ||||||||||  | |||||||||||||| ||||||||||||| ||||||    
T  34091582 ggatgcctcagtgattttatgatcttgagtgcaattctagactatgaattgtcacctagatatgatatatgagactgagttttgaaattattat 34091489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 90 - 167
Target Start/End: Complemental strand, 34092464 - 34092387
Alignment:
Q  90 tcgatgacccgaaaagaattgacggatattatttattccattaaattttgtaaatgttgggatgcctcggtgatttta 167  Q
    |||||||||||||||||||||||||||||||||| |   ||||||||||||||||||| ||||||||| |||||||||    
T  34092464 tcgatgacccgaaaagaattgacggatattatttgtcatattaaattttgtaaatgtttggatgcctccgtgatttta 34092387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 92 - 219
Target Start/End: Complemental strand, 34094285 - 34094142
Alignment:
Q  92 gatgacccgaaaagaattgacggatattatttattccattaaattttgtaaatgt---------------tgggatgcctcggtgattttacaatcttga 176  Q
    |||||||||||||||||||||||||||| ||| | ||||||||||||||||||||               ||| |||||||||||||||||  |||||||    
T  34094285 gatgacccgaaaagaattgacggatattttttgtcccattaaattttgtaaatgtacattttgtaaacattggcatgcctcggtgattttatgatcttga 34094186  T
Q  177 gtgcaattctagacta-gaattgtcactcaaatatgatatatga 219  Q
    ||||||||||| |||| ||||||||||||| |||||||||||||    
T  34094185 gtgcaattctaaactatgaattgtcactcagatatgatatatga 34094142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 149 - 241
Target Start/End: Complemental strand, 34094387 - 34094294
Alignment:
Q  149 ggatgcctcggtgattttacaatcttgagtgcaattctagactagaa-ttgtcactcaaatatgatatatgagcctgagttttgaaagtattat 241  Q
    |||||||||||||||||||  ||||||||||||||||||||||| || |||||||||| ||| || |||||||||| |||||||||| ||||||    
T  34094387 ggatgcctcggtgattttatgatcttgagtgcaattctagactataagttgtcactcatataagaaatatgagccttagttttgaaattattat 34094294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 90 - 167
Target Start/End: Complemental strand, 41126003 - 41125926
Alignment:
Q  90 tcgatgacccgaaaagaattgacggatattatttattccattaaattttgtaaatgttgggatgcctcggtgatttta 167  Q
    ||||||| ||||||||| || | || |||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  41126003 tcgatgatccgaaaagagtttatgggtattatttgttccattaaattttgtaaatgttgggatgcctcggtgatttta 41125926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 134 - 217
Target Start/End: Complemental strand, 34091393 - 34091309
Alignment:
Q  134 attttgtaaatgttgggatgcctcggtgattttacaatcttgagtgcaattctagacta-gaattgtcactcaaatatgatatat 217  Q
    |||||||||| |||||||||||||||||||||||  |||||| ||||||||||| |||| ||||||||||||| |||||||||||    
T  34091393 attttgtaaacgttgggatgcctcggtgattttatgatcttgcgtgcaattctaaactatgaattgtcactcagatatgatatat 34091309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 90 - 166
Target Start/End: Complemental strand, 34092131 - 34092055
Alignment:
Q  90 tcgatgacccgaaaagaattgacggatattatttattccattaaattttgtaaatgttgggatgcctcggtgatttt 166  Q
    |||||||||||||||||||||| ||||||||||| |   ||||||||||||||||||| ||||||||||||||||||    
T  34092131 tcgatgacccgaaaagaattgaaggatattatttgtcgtattaaattttgtaaatgtttggatgcctcggtgatttt 34092055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 90 - 166
Target Start/End: Complemental strand, 34093444 - 34093368
Alignment:
Q  90 tcgatgacccgaaaagaattgacggatattatttattccattaaattttgtaaatgttgggatgcctcggtgatttt 166  Q
    |||||||||||||||||||||||||||||||||| | | ||||||||||||||||||| |||| | |||||||||||    
T  34093444 tcgatgacccgaaaagaattgacggatattatttgtcctattaaattttgtaaatgtttggattcttcggtgatttt 34093368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 92 - 167
Target Start/End: Complemental strand, 41129076 - 41129001
Alignment:
Q  92 gatgacccgaaaagaattgacggatattatttattccattaaattttgtaaatgttgggatgcctcggtgatttta 167  Q
    |||| ||||||||||||||| ||| || |||| | |||||||||||||||||||||||||||||||||||||||||    
T  41129076 gatgtcccgaaaagaattgatggacataatttgtcccattaaattttgtaaatgttgggatgcctcggtgatttta 41129001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 92 - 167
Target Start/End: Complemental strand, 41133522 - 41133447
Alignment:
Q  92 gatgacccgaaaagaattgacggatattatttattccattaaattttgtaaatgttgggatgcctcggtgatttta 167  Q
    |||| ||||||||||||||| ||| || |||| | |||||||||||||||||||||||||||||||||||||||||    
T  41133522 gatgtcccgaaaagaattgatggacataatttgtcccattaaattttgtaaatgttgggatgcctcggtgatttta 41133447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 90 - 241
Target Start/End: Original strand, 31235643 - 31235792
Alignment:
Q  90 tcgatgacccgaaaagaattgacggatattatttattccattaaattttgtaaatgttgggatgcctcggtgattttacaatcttgagtgcaattctaga 189  Q
    ||||||||| |||| |||||||||||||||||||   || |   || ||| || |||||||||||||| |||||||||  |||||||||||||||||| |    
T  31235643 tcgatgacctgaaaggaattgacggatattatttgccccgt---atgttgcaagtgttgggatgcctcagtgattttatgatcttgagtgcaattctata 31235739  T
Q  190 cta-gaattgtcactcaaatatgatatatgagcctgagttttgaaagtattat 241  Q
     || ||||||| ||||| |||||||||||||||||   |||||||| ||||||    
T  31235740 atatgaattgtgactcatatatgatatatgagcctagattttgaaactattat 31235792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 149 - 234
Target Start/End: Complemental strand, 34093211 - 34093125
Alignment:
Q  149 ggatgcctcggtgattttacaatcttgagtgcaattctagacta-gaattgtcactcaaatatgatatatgagcctgagttttgaaa 234  Q
    ||||||||| |||||||||  ||||||||| ||||||||||||| ||||||||||||| |||| ||||||||| |||||||||||||    
T  34093211 ggatgcctcagtgattttatgatcttgagttcaattctagactatgaattgtcactcagatataatatatgagtctgagttttgaaa 34093125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 90 - 241
Target Start/End: Original strand, 31234916 - 31235066
Alignment:
Q  90 tcgatgacccgaaaagaattgacggatattatttattccattaaattttgtaaatgttgggatgcctcggtgattttacaatcttgagtgcaattctaga 189  Q
    |||||||| ||||| ||||||||||||||||||| | ||||  |  |  | || ||||||||||||||  ||||||||  |||| |||||||||| || |    
T  31234916 tcgatgacacgaaaggaattgacggatattatttgtcccat--atgtcggcaagtgttgggatgcctcaatgattttatgatctagagtgcaattatata 31235013  T
Q  190 cta-gaattgtcactcaaatatgatatatgagcctgagttttgaaagtattat 241  Q
    ||| ||||||||||||| ||||||||||||||||| | |||||||| ||||||    
T  31235014 ctatgaattgtcactcatatatgatatatgagcctaaattttgaaactattat 31235066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 90 - 167
Target Start/End: Complemental strand, 34092781 - 34092704
Alignment:
Q  90 tcgatgacccgaaaagaattgacggatattatttattccattaaattttgtaaatgttgggatgcctcggtgatttta 167  Q
    ||||||| |||||||||||||| ||||||||||| | | ||||||||||||||||||| ||||| |||||||||||||    
T  34092781 tcgatgatccgaaaagaattgaaggatattatttgtcctattaaattttgtaaatgtttggatgtctcggtgatttta 34092704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 90 - 167
Target Start/End: Complemental strand, 34093780 - 34093703
Alignment:
Q  90 tcgatgacccgaaaagaattgacggatattatttattccattaaattttgtaaatgttgggatgcctcggtgatttta 167  Q
    |||||||||||||||||||||||||| ||||| |||   ||||||||||||||||||| ||||||||| |||||||||    
T  34093780 tcgatgacccgaaaagaattgacggaaattatctatcgtattaaattttgtaaatgtttggatgcctcagtgatttta 34093703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 149 - 221
Target Start/End: Complemental strand, 34094516 - 34094443
Alignment:
Q  149 ggatgcctcggtgattttacaatcttgagtgcaattctagacta-gaattgtcactcaaatatgatatatgagc 221  Q
    |||||||||||||||||||  |||||||||||||||||| |||| ||||||||||||| |||||||||||||||    
T  34094516 ggatgcctcggtgattttatgatcttgagtgcaattctaaactatgaattgtcactcagatatgatatatgagc 34094443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 106 - 167
Target Start/End: Complemental strand, 41129261 - 41129200
Alignment:
Q  106 aattgacggatattatttattccattaaattttgtaaatgttgggatgcctcggtgatttta 167  Q
    |||| ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  41129261 aattaacggatattatttgtcccattaaattttgtaaatgttgggatgcctcggtgatttta 41129200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 134 - 221
Target Start/End: Complemental strand, 34092046 - 34091958
Alignment:
Q  134 attttgtaaatgttgggatgcctcggtgattttacaatcttgagtgcaattctagacta-gaattgtcactcaaatatgatatatgagc 221  Q
    |||||||||| |||||||||||||||||||||||  ||||| |||||| ||| | |||| ||||||||||||| |||||||||||||||    
T  34092046 attttgtaaacgttgggatgcctcggtgattttatgatctttagtgcagttcaaaactatgaattgtcactcatatatgatatatgagc 34091958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 144 - 241
Target Start/End: Original strand, 31235850 - 31235948
Alignment:
Q  144 tgttgggatgcctcggtgattttacaatcttgagtgcaattctagacta-gaattgtcactcaaatatgatatatgagcctgagttttgaaagtattat 241  Q
    ||||||||||||||  ||||||||  |||||||||||||||||| || | |||| |||||||| ||||||||||||||||| | |||||||| ||||||    
T  31235850 tgttgggatgcctcaatgattttatgatcttgagtgcaattctataccatgaatcgtcactcatatatgatatatgagcctaaattttgaaactattat 31235948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 134 - 192
Target Start/End: Complemental strand, 41125914 - 41125856
Alignment:
Q  134 attttgtaaatgttgggatgcctcggtgattttacaatcttgagtgcaattctagacta 192  Q
    |||||||||||||||||||||||  |||||||||| |||||||||||||||||||||||    
T  41125914 attttgtaaatgttgggatgcctaagtgattttacgatcttgagtgcaattctagacta 41125856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 90 - 167
Target Start/End: Complemental strand, 34091017 - 34090940
Alignment:
Q  90 tcgatgacccgaaaagaattgacggatattatttattccattaaattttgtaaatgttgggatgcctcggtgatttta 167  Q
    |||||||||||||||||||||| ||||||||||| | | ||||||||||||||||||| ||||| ||  |||||||||    
T  34091017 tcgatgacccgaaaagaattgatggatattatttgtcctattaaattttgtaaatgtttggatggcttagtgatttta 34090940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 134 - 217
Target Start/End: Complemental strand, 34092692 - 34092608
Alignment:
Q  134 attttgtaaatgttgggatgcctcggtgattttacaatcttgagtgcaattctagacta-gaattgtcactcaaatatgatatat 217  Q
    ||||||||||  ||||||||||||||||||||||  |||||| ||||||||||| |||| ||||||||||||| ||||| |||||    
T  34092692 attttgtaaacattgggatgcctcggtgattttatgatcttgggtgcaattctaaactatgaattgtcactcagatatgttatat 34092608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 134 - 217
Target Start/End: Complemental strand, 34093355 - 34093271
Alignment:
Q  134 attttgtaaatgttgggatgcctcggtgattttacaatcttgagtgcaattctagacta-gaattgtcactcaaatatgatatat 217  Q
    |||||||||| ||||||||| || ||||||||||  ||||| |||||||||||| |||| ||||||||||||| |||||||||||    
T  34093355 attttgtaaacgttgggatgactaggtgattttatgatctttagtgcaattctaaactatgaattgtcactcagatatgatatat 34093271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 90 - 241
Target Start/End: Original strand, 31234605 - 31234754
Alignment:
Q  90 tcgatgacccgaaaagaattgacggatattatttattccattaaattttgtaaatgttgggatgcctcggtgattttacaatcttgagtgcaattctaga 189  Q
    ||||||||||||||  |||||||||||||||||| | ||||   || |||  | |||||||||||||   ||||||||  |||||||||||||||||| |    
T  31234605 tcgatgacccgaaagaaattgacggatattatttgtcccat---atgttgctagtgttgggatgccttaatgattttatgatcttgagtgcaattctata 31234701  T
Q  190 cta-gaattgtcactcaaatatgatatatgagcctgagttttgaaagtattat 241  Q
    ||| ||||||||||||| | | |||||| ||| || | |||||||| ||||||    
T  31234702 ctatgaattgtcactcataaaagatatacgagtctaaattttgaaactattat 31234754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 90 - 241
Target Start/End: Original strand, 31234761 - 31234909
Alignment:
Q  90 tcgatgacccgaaaagaattgacggatattatttattccattaaattttgtaaatgttgggatgcctcggtgattttacaatcttgagtgcaattctaga 189  Q
    |||||||| ||||| ||||||||||||||||||| | ||||  |  || | || ||||||||||||||  ||||||||  |||||||||||||||||| |    
T  31234761 tcgatgacacgaaaggaattgacggatattatttgtcccat--atgttggcaagtgttgggatgcctcaatgattttatgatcttgagtgcaattctata 31234858  T
Q  190 cta-gaattgtcactcaaatatgatatatgagcctgagttttgaaagtattat 241  Q
    ||| ||||||||||||  |||  |||||| ||||| | |||||||| ||||||    
T  31234859 ctatgaattgtcactc--ataatatatatcagcctaaattttgaaactattat 31234909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 134 - 187
Target Start/End: Complemental strand, 34093691 - 34093638
Alignment:
Q  134 attttgtaaatgttgggatgcctcggtgattttacaatcttgagtgcaattcta 187  Q
    |||||||||| |||||||||||||||||||||||  ||||||||||||||||||    
T  34093691 attttgtaaacgttgggatgcctcggtgattttatgatcttgagtgcaattcta 34093638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 144 - 223
Target Start/End: Original strand, 31235383 - 31235463
Alignment:
Q  144 tgttgggatgcctcggtgattttacaatcttgagtgcaattctagacta-gaattgtcactcaaatatgatatatgagcct 223  Q
    ||||| |||||||| |||||||||  |||||||||||||||||| | || ||||||| ||||| |||||||||||||||||    
T  31235383 tgttgtgatgcctcagtgattttatgatcttgagtgcaattctataatatgaattgtgactcatatatgatatatgagcct 31235463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 134 - 221
Target Start/End: Complemental strand, 34092375 - 34092287
Alignment:
Q  134 attttgtaaatgttgggatgcctcggtgattttacaatcttgagtgcaattctagacta-gaattgtcactcaaatatgatatatgagc 221  Q
    ||||||| || ||||||||||||| |||| |||   |||||| ||||||||||| |||| ||||||||||||| |||||||||||||||    
T  34092375 attttgttaacgttgggatgcctctgtgagtttttgatcttgggtgcaattctaaactatgaattgtcactcagatatgatatatgagc 34092287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 150 - 241
Target Start/End: Complemental strand, 34092880 - 34092788
Alignment:
Q  150 gatgcctcggtgattttacaatcttgagtgcaattctagacta-gaattgtcactcaaatatgatatatgagcctgagttttgaaagtattat 241  Q
    |||| ||||||||||||   | ||||||||||||||||||||| | ||||||||||| |||||||||||||| | ||||||||| | ||||||    
T  34092880 gatgtctcggtgattttttgagcttgagtgcaattctagactatgtattgtcactcagatatgatatatgagtcagagttttgatattattat 34092788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 136 - 210
Target Start/End: Complemental strand, 34093020 - 34092945
Alignment:
Q  136 tttgtaaatgttgggatgcctcggtgattttacaatcttgagtgcaattctagacta-gaattgtcactcaaatat 210  Q
    ||||||||  |||||||| |||||||||||||  ||||||||||||||||||||||| | ||||||||||| ||||    
T  34093020 tttgtaaacattgggatgactcggtgattttatgatcttgagtgcaattctagactatgtattgtcactcagatat 34092945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 90 - 241
Target Start/End: Original strand, 31233986 - 31234135
Alignment:
Q  90 tcgatgacccgaaaagaattgacggatattatttattccattaaattttgtaaatgttgggatgcctcggtgattttacaatcttgagtgcaattctaga 189  Q
    |||||||| ||||| |||||||| |||||||||| | ||||   || |||  | ||||||||| ||||  |||||||   |||| ||||||||||||| |    
T  31233986 tcgatgacacgaaaggaattgacagatattatttgtcccat---atgttgccagtgttgggatacctcaatgattttttgatctagagtgcaattctata 31234082  T
Q  190 cta-gaattgtcactcaaatatgatatatgagcctgagttttgaaagtattat 241  Q
    ||| ||||||||||||| |||||||||||||| || | |||| ||| ||||||    
T  31234083 ctatgaattgtcactcatatatgatatatgagtctaaattttaaaactattat 31234135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 134 - 192
Target Start/End: Complemental strand, 34089808 - 34089750
Alignment:
Q  134 attttgtaaatgttgggatgcctcggtgattttacaatcttgagtgcaattctagacta 192  Q
    ||||| |||||||||||||||||  ||||| ||| ||||||||||||||||||||||||    
T  34089808 attttataaatgttgggatgccttagtgatattataatcttgagtgcaattctagacta 34089750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 92 - 167
Target Start/End: Complemental strand, 34091810 - 34091739
Alignment:
Q  92 gatgacccgaaaagaattgacggatattatttattccattaaattttgtaaatgttgggatgcctcggtgatttta 167  Q
    |||||||||||||||||||||||||||||||| | | |||||||||||||    || |||||||| ||||||||||    
T  34091810 gatgacccgaaaagaattgacggatattatttgtcctattaaattttgta----tttggatgccttggtgatttta 34091739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 135 - 202
Target Start/End: Complemental strand, 34092562 - 34092495
Alignment:
Q  135 ttttgtaaatgttgggatgcctcggtgattttacaatcttgagtgcaattctagacta-gaattgtcac 202  Q
    |||||||||| |||||||||||  |||||||||  ||||||||||||||||||||||| ||||||||||    
T  34092562 ttttgtaaat-ttgggatgcctttgtgattttatgatcttgagtgcaattctagactatgaattgtcac 34092495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 79 - 114
Target Start/End: Complemental strand, 41129878 - 41129843
Alignment:
Q  79 cgatgccttgatcgatgacccgaaaagaattgacgg 114  Q
    ||||||||||||||||||||||||||||||||||||    
T  41129878 cgatgccttgatcgatgacccgaaaagaattgacgg 41129843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 144 - 241
Target Start/End: Original strand, 31234342 - 31234442
Alignment:
Q  144 tgttgggatgcctcggtgattttacaatcttgagtgcaattctagacta-gaattgtcactc--aaatatgatatatgagcctgagttttgaaagtatta 240  Q
    |||||||||| |||  ||||||||  |||||||||||||||||| |||| ||||||||||||  | ||||||||||||| | | | |||||||| |||||    
T  31234342 tgttgggatgactcaatgattttatgatcttgagtgcaattctatactatgaattgtcactcatatatatgatatatgaacttaaattttgaaactatta 31234441  T
Q  241 t 241  Q
    |    
T  31234442 t 31234442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 130 - 167
Target Start/End: Complemental strand, 34094695 - 34094658
Alignment:
Q  130 ttaaattttgtaaatgttgggatgcctcggtgatttta 167  Q
    |||||||||||||||||||| |||||||||||||||||    
T  34094695 ttaaattttgtaaatgttggcatgcctcggtgatttta 34094658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 123
Target Start/End: Original strand, 31234298 - 31234331
Alignment:
Q  90 tcgatgacccgaaaagaattgacggatattattt 123  Q
    |||||||||||||| |||||||||||||||||||    
T  31234298 tcgatgacccgaaaggaattgacggatattattt 31234331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 167
Target Start/End: Complemental strand, 34090928 - 34090895
Alignment:
Q  134 attttgtaaatgttgggatgcctcggtgatttta 167  Q
    |||||||||| |||||||||||||||||||||||    
T  34090928 attttgtaaacgttgggatgcctcggtgatttta 34090895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 205 - 241
Target Start/End: Complemental strand, 34093487 - 34093451
Alignment:
Q  205 aaatatgatatatgagcctgagttttgaaagtattat 241  Q
    ||||||||| |||||||||||||||||||| ||||||    
T  34093487 aaatatgatgtatgagcctgagttttgaaattattat 34093451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 91; Significance: 4e-44; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 93 - 241
Target Start/End: Original strand, 3084923 - 3085073
Alignment:
Q  93 atgacccgaaaagaattgacggatattatttattc-cattaaattttgtaaatgttgggatgcctcggtgattttacaatcttgagtgcaattctagact 191  Q
    ||||||||||||||||||||||||||||||| | | | ||||||||| |||||||||||||||||||| |||||||  |||||||||| |||||||||||    
T  3084923 atgacccgaaaagaattgacggatattatttttgctccttaaattttttaaatgttgggatgcctcggcgattttatgatcttgagtgaaattctagact 3085022  T
Q  192 a-gaattgtcactcaaatatgatatatgagcctgagttttgaaagtattat 241  Q
    | ||||||||||||| |||||||| ||||||||||||||||||| ||||||    
T  3085023 atgaattgtcactcagatatgatacatgagcctgagttttgaaattattat 3085073  T

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Target: chr6; HSP #2
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 93 - 241
Target Start/End: Original strand, 3084603 - 3084753
Alignment:
Q  93 atgacccgaaaagaattgacggatattatttattc-cattaaattttgtaaatgttgggatgcctcggtgattttacaatcttgagtgcaattctagact 191  Q
    ||||||||||||||||||||||||||||||| | | | ||||||||| |||||| |||||||||||||||||||||  |||||||||| |||||||||||    
T  3084603 atgacccgaaaagaattgacggatattatttttgctccttaaattttttaaatgatgggatgcctcggtgattttatgatcttgagtgaaattctagact 3084702  T
Q  192 a-gaattgtcactcaaatatgatatatgagcctgagttttgaaagtattat 241  Q
    | ||||||||||||| |||| ||| ||||||||||||||||||| ||||||    
T  3084703 atgaattgtcactcagatattatacatgagcctgagttttgaaattattat 3084753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 90 - 241
Target Start/End: Original strand, 3084760 - 3084913
Alignment:
Q  90 tcgatgacccgaaaagaattgacggatattatttattc-cattaaattttgtaaatgttgggatgcctcggtgattttacaatcttgagtgcaattctag 188  Q
    |||||||||||||||||||||||||||||||||| | | | ||||||||| |||||||||||||||||| |||||||||  || ||||||| ||||||||    
T  3084760 tcgatgacccgaaaagaattgacggatattatttttactccttaaattttttaaatgttgggatgcctcagtgattttatgatattgagtgaaattctag 3084859  T
Q  189 acta-gaattgtcactcaaatatgatatatgagcctgagttttgaaagtattat 241  Q
    |||| ||||||||||| | |||||||  ||||||||||||||||||| ||||||    
T  3084860 actatgaattgtcacttagatatgatccatgagcctgagttttgaaattattat 3084913  T

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Target: chr6; HSP #4
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 134 - 241
Target Start/End: Original strand, 3084211 - 3084319
Alignment:
Q  134 attttgtaaatgttgggatgcctcggtgattttacaatcttgagtgcaattctagact-agaattgtcactcaaatatgatatatgagcctgagttttga 232  Q
    |||||||||||||||| |||||||||||||||||  ||||||||||||||||||||||  |||||||||||||||||||||| |||||||||||||||||    
T  3084211 attttgtaaatgttggaatgcctcggtgattttatgatcttgagtgcaattctagactctgaattgtcactcaaatatgatacatgagcctgagttttga 3084310  T
Q  233 aagtattat 241  Q
    || ||||||    
T  3084311 aattattat 3084319  T

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Target: chr6; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 134 - 239
Target Start/End: Original strand, 3085169 - 3085275
Alignment:
Q  134 attttgtaaatgttgggatgcctcggtgattttacaatcttgagtgcaattctagacta-gaattgtcactcaaatatgatatatgagcctgagttttga 232  Q
    |||||||||||||||| |||||||||||||||||  ||||||||||||||||| ||||| |||||||||||||||||||||| |||||||||||||||||    
T  3085169 attttgtaaatgttggaatgcctcggtgattttatgatcttgagtgcaattcttgactatgaattgtcactcaaatatgatacatgagcctgagttttga 3085268  T
Q  233 aagtatt 239  Q
    || ||||    
T  3085269 aattatt 3085275  T

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Target: chr6; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 90 - 167
Target Start/End: Original strand, 3085080 - 3085157
Alignment:
Q  90 tcgatgacccgaaaagaattgacggatattatttattccattaaattttgtaaatgttgggatgcctcggtgatttta 167  Q
    ||||||||||||||||||||||||||| |||||| | ||||||||||||  ||||||||||||||||| || ||||||    
T  3085080 tcgatgacccgaaaagaattgacggattttatttgtcccattaaatttttaaaatgttgggatgcctcagtaatttta 3085157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 90 - 167
Target Start/End: Original strand, 3085284 - 3085361
Alignment:
Q  90 tcgatgacccgaaaagaattgacggatattatttattccattaaattttgtaaatgttgggatgcctcggtgatttta 167  Q
    |||||||||||||| ||||||| ||||||||||| | |||||||| |||||||||||||||||||||  |||||||||    
T  3085284 tcgatgacccgaaaggaattgatggatattatttgtcccattaaactttgtaaatgttgggatgcctatgtgatttta 3085361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 90 - 167
Target Start/End: Original strand, 3085540 - 3085617
Alignment:
Q  90 tcgatgacccgaaaagaattgacggatattatttattccattaaattttgtaaatgttgggatgcctcggtgatttta 167  Q
    |||||||||||||| ||||||| ||||||||||| | |||||||| ||||||||||||||||||||||  ||||||||    
T  3085540 tcgatgacccgaaaggaattgatggatattatttgtcccattaaactttgtaaatgttgggatgcctctatgatttta 3085617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 158 - 241
Target Start/End: Original strand, 3085449 - 3085533
Alignment:
Q  158 ggtgattttacaatcttgagtgcaattctagacta-gaattgtcactcaaatatgatatatgagcctgagttttgaaagtattat 241  Q
    ||||||||||  |||||| |||||||||||||||| ||||||||||||| |||  ||||||||||||||||||||||| ||||||    
T  3085449 ggtgattttatgatcttgtgtgcaattctagactatgaattgtcactcagatacaatatatgagcctgagttttgaaattattat 3085533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 134 - 221
Target Start/End: Original strand, 3086856 - 3086944
Alignment:
Q  134 attttgtaaatgttgggatgcctcggtgattttacaatcttgagtgcaattctagacta-gaattgtcactcaaatatgatatatgagc 221  Q
    |||||||||||||||||||| ||  |||||||||  |||||||||||| |||||||||| |||||||||| || |||||||||||||||    
T  3086856 attttgtaaatgttgggatgtcttagtgattttatgatcttgagtgcatttctagactatgaattgtcacccagatatgatatatgagc 3086944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 158 - 241
Target Start/End: Original strand, 3085705 - 3085789
Alignment:
Q  158 ggtgattttacaatcttgagtgcaattctagactagaa-ttgtcactcaaatatgatatatgagcctgagttttgaaagtattat 241  Q
    ||||||||||  |||||| |||||||||||||||| || |||||||||| |||  ||||||||||||||||||||||| ||||||    
T  3085705 ggtgattttatgatcttgtgtgcaattctagactataaattgtcactcagatacaatatatgagcctgagttttgaaattattat 3085789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 158 - 241
Target Start/End: Original strand, 3084509 - 3084593
Alignment:
Q  158 ggtgattttacaatcttgagtgcaattctagacta-gaattgtcactcaaatatgatatatgagcctgagttttgaaagtattat 241  Q
    ||||||||||  |||||| |||||||||||||||| ||||||||||||| |||  ||| | ||||||||||||||||| ||||||    
T  3084509 ggtgattttatgatcttgtgtgcaattctagactatgaattgtcactcagatacaatacaagagcctgagttttgaaattattat 3084593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 108 - 167
Target Start/End: Original strand, 3084362 - 3084421
Alignment:
Q  108 ttgacggatattatttattccattaaattttgtaaatgttgggatgcctcggtgatttta 167  Q
    |||||||||||||||| | |||||||| |||||||||||||||||||||| || ||||||    
T  3084362 ttgacggatattatttgtcccattaaactttgtaaatgttgggatgcctctgttatttta 3084421  T

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Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 167
Target Start/End: Original strand, 3085629 - 3085662
Alignment:
Q  134 attttgtaaatgttgggatgcctcggtgatttta 167  Q
    ||||||||||||||||||||||||| ||||||||    
T  3085629 attttgtaaatgttgggatgcctcgatgatttta 3085662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 64; Significance: 5e-28; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 90 - 241
Target Start/End: Complemental strand, 36231431 - 36231283
Alignment:
Q  90 tcgatgacccgaaaagaattgacggatattatttattccattaaattttgtaaatgttgggatgcctcggtgattttacaatcttgagtgcaattctaga 189  Q
    ||||| |||||||||||||||||||||||||||| | ||||    ||||| || |||||||||||||   ||||||||  |||||||||||||||||| |    
T  36231431 tcgataacccgaaaagaattgacggatattatttgtcccat----ttttgcaagtgttgggatgccttaatgattttatgatcttgagtgcaattctata 36231336  T
Q  190 cta-gaattgtcactcaaatatgatatatgagcctgagttttgaaagtattat 241  Q
    ||| ||||||||||||| ||||||||||| ||||| | |||||||| ||||||    
T  36231335 ctatgaattgtcactcatatatgatatataagcctaaattttgaaactattat 36231283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 132 - 241
Target Start/End: Complemental strand, 36233573 - 36233464
Alignment:
Q  132 aaattttgtaaatgttgggatgcctcggtgattttacaatcttgagtgcaattctagacta-gaattgtcactcaaatatgatatatgagcctgagtttt 230  Q
    |||||||||||||||||||||||||||||||||||   ||||| ||||||||||||||||| ||||||||||||| ||||||||||||||||| |  |||    
T  36233573 aaattttgtaaatgttgggatgcctcggtgattttctgatctt-agtgcaattctagactatgaattgtcactcatatatgatatatgagcctaaacttt 36233475  T
Q  231 gaaagtattat 241  Q
    |||| ||||||    
T  36233474 gaaactattat 36233464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 90 - 241
Target Start/End: Complemental strand, 36233300 - 36233150
Alignment:
Q  90 tcgatgacccgaaaagaattgacggatattatttattccattaaattttgtaaatgttgggatgcctcggtgattttacaatcttgagtgcaattctaga 189  Q
    |||||||||||||| ||||||||||||||||||| | ||||  |  || | || ||||||||||||||  ||||||||  |||||||||||||||||| |    
T  36233300 tcgatgacccgaaaggaattgacggatattatttgtcccat--atgttggcaagtgttgggatgcctcaatgattttatgatcttgagtgcaattctata 36233203  T
Q  190 cta-gaattgtcactcaaatatgatatatgagcctgagttttgaaagtattat 241  Q
    ||| ||||||| ||||| ||||||||||||||||| | |||||||| ||||||    
T  36233202 ctatgaattgttactcatatatgatatatgagcctaaattttgaaactattat 36233150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 92 - 241
Target Start/End: Complemental strand, 36228257 - 36228110
Alignment:
Q  92 gatgacccgaaaagaattgacggatattatttattccattaaattttgtaaatgttgggatgcctcggtgattttacaatcttgagtgcaattctagact 191  Q
    |||||||||||| ||||||||||||||||||| ||||||   || ||| || |  || ||||| |  |||||||||  ||||||||||||||||||||||    
T  36228257 gatgacccgaaatgaattgacggatattatttgttccat---atgttgcaagttctgagatgcgtatgtgattttatgatcttgagtgcaattctagact 36228161  T
Q  192 a-gaattgtcactcaaatatgatatatgagcctgagttttgaaagtattat 241  Q
    | ||||||||||||| ||||||||||||||||| | |||||||| ||||||    
T  36228160 atgaattgtcactcatatatgatatatgagcctaaattttgaaactattat 36228110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 105 - 241
Target Start/End: Complemental strand, 36231572 - 36231438
Alignment:
Q  105 gaattgacggatattatttattccattaaattttgtaaatgttgggatgcctcggtgattttacaatcttgagtgcaattctagacta-gaattgtcact 203  Q
    ||||||||||||||||||| ||||||   || ||| || |||| |||||||||  ||||||||  ||||||||||||||| || |||| |||||||||||    
T  36231572 gaattgacggatattatttgttccat---atgttgcaagtgttcggatgcctcaatgattttatgatcttgagtgcaattttatactatgaattgtcact 36231476  T
Q  204 caaatatgatatatgagcctgagttttgaaagtattat 241  Q
    || ||||||||||||||||| | |||||||| ||||||    
T  36231475 catatatgatatatgagcctaaattttgaaactattat 36231438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 90 - 241
Target Start/End: Complemental strand, 36231742 - 36231595
Alignment:
Q  90 tcgatgacccgaaaagaattgacggatattatttattccattaaattttgtaaatgttgggatgcctcggtgattttacaatcttgagtgcaattctaga 189  Q
    |||||||||||||| ||||||||||||||||||| |||||||   | ||| || |||||||||||||   ||||||||  |||||||||||||||||| |    
T  36231742 tcgatgacccgaaaggaattgacggatattatttgttccatt---tgttgcaagtgttgggatgccttaatgattttattatcttgagtgcaattctata 36231646  T
Q  190 cta-gaattgtcactcaaatatgatatatgagcctgagttttgaaagtattat 241  Q
    |||  |||||| ||||  ||||||||||||||||| | |||||||| ||||||    
T  36231645 ctataaattgtgactc--atatgatatatgagcctaaattttgaaactattat 36231595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 90 - 241
Target Start/End: Complemental strand, 36230336 - 36230187
Alignment:
Q  90 tcgatgacccgaaaagaattgacggatattatttattccattaaattttgtaaatgttgggatgcctcggtgattttacaatcttgagtgcaattctaga 189  Q
    |||||||||||||| ||||| ||||||||||||| | ||||   || ||| || ||||||||||||||  ||||||||  ||||||| |||||||||| |    
T  36230336 tcgatgacccgaaaggaattcacggatattatttgtcccat---atgttgcaagtgttgggatgcctcaatgattttatgatcttgaatgcaattctata 36230240  T
Q  190 cta-gaattgtcactcaaatatgatatatgagcctgagttttgaaagtattat 241  Q
    ||| |||||||||||||  |||||||||| ||||| | |||||||| ||||||    
T  36230239 ctatgaattgtcactcatgtatgatatataagcctaaattttgaaactattat 36230187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 90 - 217
Target Start/End: Complemental strand, 36231117 - 36230992
Alignment:
Q  90 tcgatgacccgaaaagaattgacggatattatttattccattaaattttgtaaatgttgggatgcctcggtgattttacaatcttgagtgcaattctaga 189  Q
    |||||||||||||| |||||||||| |||||||| ||| ||   || ||| || ||||||||||||||  |||||||| ||||||||||| |||||||||    
T  36231117 tcgatgacccgaaaggaattgacggttattatttgttctat---atgttgcaagtgttgggatgcctctatgattttataatcttgagtgaaattctaga 36231021  T
Q  190 cta-gaattgtcactcaaatatgatatat 217  Q
    ||| ||||||| |||||||||||| ||||    
T  36231020 ctatgaattgttactcaaatatgagatat 36230992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 90 - 241
Target Start/End: Complemental strand, 36232988 - 36232839
Alignment:
Q  90 tcgatgacccgaaaagaattgacggatattatttattccattaaattttgtaaatgttgggatgcctcggtgattttacaatcttgagtgcaattctaga 189  Q
    ||||| |||||||| ||||||||||||||||||| | ||||   || ||| || |||||| | |||||  ||||||||  |||||||||||||||||| |    
T  36232988 tcgataacccgaaaggaattgacggatattatttgtcccat---atgttgcaagtgttggtaagcctcaatgattttatgatcttgagtgcaattctata 36232892  T
Q  190 cta-gaattgtcactcaaatatgatatatgagcctgagttttgaaagtattat 241  Q
    ||| ||||||||||||| ||||||||||||| ||| | |||||||| ||||||    
T  36232891 ctatgaattgtcactcatatatgatatatgaacctaaattttgaaactattat 36232839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 90 - 241
Target Start/End: Complemental strand, 36228103 - 36227954
Alignment:
Q  90 tcgatgacccgaaaagaattgacggatattatttattccattaaattttgtaaatgttgggatgcctcggtgattttacaatcttgagtgcaattctaga 189  Q
    |||||||||||||| ||||||||| ||||||||| | ||||   || ||| || || |||||| ||||  ||||||||  |||||||||||||||||| |    
T  36228103 tcgatgacccgaaaggaattgacgtatattatttgtcccat---atgttgcaagtgatgggattcctcaatgattttatgatcttgagtgcaattctata 36228007  T
Q  190 cta-gaattgtcactcaaatatgatatatgagcctgagttttgaaagtattat 241  Q
     || |||||||||| || ||||||||||||||||| | |||||||| ||||||    
T  36228006 atatgaattgtcacacatatatgatatatgagcctaaattttgaaactattat 36227954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 90 - 241
Target Start/End: Complemental strand, 36233143 - 36232995
Alignment:
Q  90 tcgatgacccgaaaagaattgacggatattatttattccattaaattttgtaaatgttgggatgcctcggtgattttacaatcttgagtgcaattctaga 189  Q
    ||||| |||||||| ||||||||||||||||||| | ||||   || ||| || ||||||||||||||  ||||||||  ||||||||||||||| ||      
T  36233143 tcgataacccgaaaggaattgacggatattatttgtcccat---atgttgcaagtgttgggatgcctcaatgattttatgatcttgagtgcaattttatt 36233047  T
Q  190 cta-gaattgtcactcaaatatgatatatgagcctgagttttgaaagtattat 241  Q
    ||| ||||||||||||| |||| |||||||||||| | |||||||| ||||||    
T  36233046 ctacgaattgtcactcatatataatatatgagcct-aattttgaaactattat 36232995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 92 - 241
Target Start/End: Complemental strand, 36229822 - 36229675
Alignment:
Q  92 gatgacccgaaaagaattgacggatattatttattccattaaattttgtaaatgttgggatgcctcggtgattttacaatcttgagtgcaattctagact 191  Q
    |||||||||||| ||||||||||||||||||| | | ||   |  ||| || ||||||||||||||||| ||||||  ||||||| |||||||||| | |    
T  36229822 gatgacccgaaaggaattgacggatattatttgtcctat---acgttgaaagtgttgggatgcctcggttattttatgatcttgaatgcaattctataat 36229726  T
Q  192 a-gaattgtcactcaaatatgatatatgagcctgagttttgaaagtattat 241  Q
    | ||||||| ||||| ||||||||||||||| | | |||||||| ||||||    
T  36229725 atgaattgtgactcatatatgatatatgagcgtaaattttgaaactattat 36229675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 146 - 241
Target Start/End: Complemental strand, 36232324 - 36232228
Alignment:
Q  146 ttgggatgcctcggtgattttacaatcttgagtgcaattctagacta-gaattgtcactcaaatatgatatatgagcctgagttttgaaagtattat 241  Q
    ||||||||||||  ||||||||  |||||||||||||||||| |||| ||||||||||||| ||||||||||| ||||| | |||||||| ||||||    
T  36232324 ttgggatgcctcattgattttatgatcttgagtgcaattctatactatgaattgtcactcatatatgatatataagcctaaattttgaaactattat 36232228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 90 - 241
Target Start/End: Complemental strand, 36232051 - 36231904
Alignment:
Q  90 tcgatgacccgaaaagaattgacggatattatttattccattaaattttgtaaatgttgggatgcctcggtgattttacaatcttgagtgcaattctaga 189  Q
    |||||||||||||| ||||||| ||||||||||| | ||||   || ||| || |||||| |||||||  |||| |||  ||||||||||| |||||| |    
T  36232051 tcgatgacccgaaaggaattgatggatattatttgtcccat---atgttgcaagtgttggtatgcctc--tgatcttatgatcttgagtgccattctata 36231957  T
Q  190 cta-gaattgtcactcaaatatgatatatgagcctgagttttgaaagtattat 241  Q
    ||| ||||||||||||| ||||||||||||||||| | ||||| || ||||||    
T  36231956 ctacgaattgtcactcatatatgatatatgagcctaaattttgtaactattat 36231904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 144 - 241
Target Start/End: Complemental strand, 36231847 - 36231749
Alignment:
Q  144 tgttgggatgcctcggtgattttacaatcttgagtgcaattctagacta-gaattgtcactcaaatatgatatatgagcctgagttttgaaagtattat 241  Q
    ||||||||||||||  ||||||||  ||||||||||| |||||| |||| ||||||||||||| ||||||||||||| ||| | |||||||| ||||||    
T  36231847 tgttgggatgcctcattgattttatgatcttgagtgccattctatactacgaattgtcactcatatatgatatatgaacctaaattttgaaactattat 36231749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 90 - 241
Target Start/End: Complemental strand, 36232679 - 36232528
Alignment:
Q  90 tcgatgacccgaaaagaattgacggatattatttattccattaaattttgtaaatgttgggatgcctcggtgattttacaatcttgagtgcaattctaga 189  Q
    |||||||||||||| ||||||||||||||||||  | ||||   || ||| || ||||||||||||||  ||||||||  ||||||||||||||| ||      
T  36232679 tcgatgacccgaaaggaattgacggatattattcgtcccat---atgttgcaagtgttgggatgcctcaatgattttatgatcttgagtgcaattttatt 36232583  T
Q  190 cta-gaattgtcactc--aaatatgatatatgagcctgagttttgaaagtattat 241  Q
    ||| ||||||||||||  | |||||||||||| |||||| |||||| | ||||||    
T  36232582 ctacgaattgtcactcatatatatgatatatgtgcctgaattttgatactattat 36232528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 90 - 218
Target Start/End: Complemental strand, 36230957 - 36230833
Alignment:
Q  90 tcgatgacccgaaaagaattgacggatattatttattccattaaattttgtaaatgttgggatgcctcggtgattttacaatcttgagtgcaattctaga 189  Q
    |||||||||||||| ||||||||||||||||||| |||| |   || ||| || | ||| |||||||  |||||||||  ||||||||||||||||||||    
T  36230957 tcgatgacccgaaatgaattgacggatattatttgttccgt---atgttgcaagttttgagatgcctatgtgattttatgatcttgagtgcaattctaga 36230861  T
Q  190 cta-gaattgtcactcaaatatgatatatg 218  Q
    ||| ||||||| ||||  ||||||||||||    
T  36230860 ctatgaattgttactc--atatgatatatg 36230833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 92 - 215
Target Start/End: Complemental strand, 36230150 - 36230030
Alignment:
Q  92 gatgacccgaaaagaattgacggatattatttattccattaaattttgtaaatgttgggatgcctcggtgattttacaatcttgagtgcaattctagact 191  Q
    |||||||||||| ||||||||||||||||||| ||| ||   || ||| || |||||| |||||||  |||||||   |||||||||||||||||| |||    
T  36230150 gatgacccgaaaggaattgacggatattatttgttcgat---atgttgcaagtgttgg-atgcctcaatgattttttgatcttgagtgcaattctatact 36230055  T
Q  192 a-gaattgtcactcaaatatgatat 215  Q
    | ||||||||||||| |||||||||    
T  36230054 atgaattgtcactcagatatgatat 36230030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 144 - 241
Target Start/End: Complemental strand, 36232784 - 36232686
Alignment:
Q  144 tgttgggatgcctcggtgattttacaatcttgagtgcaattctagacta-gaattgtcactcaaatatgatatatgagcctgagttttgaaagtattat 241  Q
    |||||||||||||   ||||||||  |||||||||||||||||| |||| ||||||| ||||| ||||||||||||||||| | |||| ||| ||||||    
T  36232784 tgttgggatgccttaatgattttatgatcttgagtgcaattctatactatgaattgtgactcatatatgatatatgagcctaaattttaaaactattat 36232686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 89 - 241
Target Start/End: Complemental strand, 36233458 - 36233307
Alignment:
Q  89 atcgatgacccgaaaagaattgacggatattatttattccattaaattttgtaaatgttgggatgcctcggtgattttacaatcttgagtgcaattctag 188  Q
    ||||||||||||||| ||||||||||||||||||| |  |||  |  || | || ||||||||||||||  |  |||||  ||||||| |||| |||||     
T  36233458 atcgatgacccgaaaggaattgacggatattatttgtctcat--atgttggcaagtgttgggatgcctcaatatttttatgatcttgaatgcagttctat 36233361  T
Q  189 acta-gaattgtcactcaaatatgatatatgagcctgagttttgaaagtattat 241  Q
    |||| ||||||||||||| ||||||||||||||||| | |||| ||| ||||||    
T  36233360 actatgaattgtcactcatatatgatatatgagcctaaattttaaaactattat 36233307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 90 - 184
Target Start/End: Complemental strand, 36232221 - 36232130
Alignment:
Q  90 tcgatgacccgaaaagaattgacggatattatttattccattaaattttgtaaatgttgggatgcctcggtgattttacaatcttgagtgcaatt 184  Q
    |||||||||||||| ||||||||||||||||||| ||||||   || ||| || |||||||||||||   ||||||||  |||||||||||||||    
T  36232221 tcgatgacccgaaaggaattgacggatattatttgttccat---atgttgcaagtgttgggatgccttaatgattttatgatcttgagtgcaatt 36232130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 90 - 241
Target Start/End: Complemental strand, 36230492 - 36230343
Alignment:
Q  90 tcgatgacccgaaaagaattgacggatattatttattccattaaattttgtaaatgttgggatgcctcggtgattttacaatcttgagtgcaattctaga 189  Q
    ||||||| | |||| |||||| |||||||||||| | ||||   || ||| || ||||||  ||||| ||||||||||  ||||||| |||||||||| |    
T  36230492 tcgatgaactgaaaggaattgccggatattatttgtcccat---atgttgcaagtgttggtgtgccttggtgattttatgatcttgaatgcaattctata 36230396  T
Q  190 cta-gaattgtcactcaaatatgatatatgagcctgagttttgaaagtattat 241  Q
     || ||||||| ||||| |||| |||||||||||| | |||||||| ||||||    
T  36230395 atatgaattgtgactcatatatcatatatgagcctaaattttgaaactattat 36230343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 90 - 241
Target Start/End: Complemental strand, 36230676 - 36230527
Alignment:
Q  90 tcgatgacccgaaaagaattgacggatattatttattccattaaattttgtaaatgttgggatgcctcggtgattttacaatcttgagtgcaattctaga 189  Q
    |||||||||||||| ||||| ||||||||||||| | | ||   || ||| |  |||||||||||||   |||||| |  |||||||||||||||||| |    
T  36230676 tcgatgacccgaaaggaattcacggatattatttgtccaat---atgttgcaggtgttgggatgccttaatgatttaatgatcttgagtgcaattctata 36230580  T
Q  190 cta-gaattgtcactcaaatatgatatatgagcctgagttttgaaagtattat 241  Q
    ||| |||||||||||||  | |||||||| ||||| | |||||||| ||||||    
T  36230579 ctatgaattgtcactcatgtttgatatataagcctaaattttgaaactattat 36230527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 90 - 241
Target Start/End: Complemental strand, 36231276 - 36231124
Alignment:
Q  90 tcgatgacccgaaaagaattgacggatattatttattccattaaattttgtaaatgttgggatgcctcggtgattttacaatcttgagtgcaattctaga 189  Q
    ||||||| |||||| ||||||||||||||||||| | ||||    ||||| || ||||||||||||||  ||||||||  ||||||| |||||| ||| |    
T  36231276 tcgatgaaccgaaaggaattgacggatattatttgtcccat----ttttgcaagtgttgggatgcctcaatgattttatgatcttgaatgcaatactata 36231181  T
Q  190 ct-agaattg----tcactcaaatatgatatatgagcctgagttttgaaagtattat 241  Q
    || | |||||    ||||||| |||||| |||||||||| | |||||||| ||||||    
T  36231180 ctaataattgtgactcactcatatatgacatatgagcctaaattttgaaactattat 36231124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 90 - 241
Target Start/End: Complemental strand, 36232521 - 36232375
Alignment:
Q  90 tcgatgacccgaaaagaattgacggatattatttattccattaaattttgtaaatgttgggatgcctcggtgattttacaatcttgagtgcaattctaga 189  Q
    ||||| |||||||| ||||||||||||||||||  | ||||   || ||| || |||||| |||||||  |||| |||  |||||||||||||||||| |    
T  36232521 tcgataacccgaaaggaattgacggatattattg-tcccat---atgttgcaagtgttggtatgcctcaatgatcttatgatcttgagtgcaattctata 36232426  T
Q  190 cta-gaattgtcactcaaatatgatatatgagcctgagttttgaaagtattat 241  Q
    ||| ||||||||||||  ||||||||||||| ||| | |||| ||| ||||||    
T  36232425 ctacgaattgtcactc--atatgatatatgaacctaaattttaaaactattat 36232375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 241
Target Start/End: Complemental strand, 36228358 - 36228266
Alignment:
Q  150 gatgcctcggtgattttacaatcttgagtgcaattctagacta-gaattgtcactcaaatatgatatatgagcctgagttttgaaagtattat 241  Q
    |||||||  |||||||||  |||||||||| |||||||||||| |||||||  |||| |||||| |||||||||  | |||||||| ||||||    
T  36228358 gatgcctatgtgattttatgatcttgagtgaaattctagactatgaattgttgctcatatatgagatatgagcccaaattttgaaactattat 36228266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 241
Target Start/End: Complemental strand, 36229957 - 36229859
Alignment:
Q  144 tgttgggatgcctcggtgattttacaatcttgagtgcaattctagacta-gaattgtcactcaaatatgatatatgagcctgagttttgaaagtattat 241  Q
    |||||||||||||   ||||||||  ||||||||||||||||||  ||| |||||||  |||| ||||||||| ||||||| | |||| ||| ||||||    
T  36229957 tgttgggatgccttaatgattttatgatcttgagtgcaattctattctatgaattgtgtctcatatatgatatttgagcctaaattttaaaactattat 36229859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 123
Target Start/End: Complemental strand, 36229999 - 36229966
Alignment:
Q  90 tcgatgacccgaaaagaattgacggatattattt 123  Q
    |||||||||||||| |||||||||||||||||||    
T  36229999 tcgatgacccgaaaggaattgacggatattattt 36229966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 61; Significance: 3e-26; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 130 - 241
Target Start/End: Complemental strand, 35091185 - 35091073
Alignment:
Q  130 ttaaattttgtaaatgttgggatgcctcggtgattttacaatcttgagtgcaattctagacta-gaattgtcactcaaatatgatatatgagcctgagtt 228  Q
    ||||||||||||||||||||||||| | ||||||||||  ||||||||||||| ||||||||| ||||||||||||| |||||| |||||||||| |  |    
T  35091185 ttaaattttgtaaatgttgggatgctttggtgattttatgatcttgagtgcaagtctagactatgaattgtcactcatatatgaaatatgagcctaaact 35091086  T
Q  229 ttgaaagtattat 241  Q
    |||||| ||||||    
T  35091085 ttgaaactattat 35091073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 89 - 205
Target Start/End: Original strand, 35081005 - 35081119
Alignment:
Q  89 atcgatgacccgaaaagaattgacggatattatttattccattaaattttgtaaatgttgggatgcctcggtgattttacaatcttgagtgcaattctag 188  Q
    ||||||||||||||| ||||||| ||||||||||| | |||| |||| ||  || |||| ||||||||| ||||||||| ||||||||||||||||||||    
T  35081005 atcgatgacccgaaaggaattgatggatattatttgtcccat-aaatgtt--aagtgtttggatgcctctgtgattttataatcttgagtgcaattctag 35081101  T
Q  189 acta-gaattgtcactca 205  Q
    |||| |||||||||||||    
T  35081102 actatgaattgtcactca 35081119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 90 - 191
Target Start/End: Original strand, 35080843 - 35080943
Alignment:
Q  90 tcgatgacccgaaaagaattgacggatattatttattccattaaattttgtaaatgttgggatgcctcggtgattttacaatcttgagtgcaattctaga 189  Q
    |||||||||||||| ||||||| ||||||||||| | |||| |||| ||| || |||| ||||||||  |||||||||  ||||||||||||||||||||    
T  35080843 tcgatgacccgaaaggaattgaaggatattatttgtcccat-aaatgttgcaagtgtttggatgccttagtgattttatcatcttgagtgcaattctaga 35080941  T
Q  190 ct 191  Q
    ||    
T  35080942 ct 35080943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 50; Significance: 1e-19; HSPs: 5)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 90 - 205
Target Start/End: Original strand, 28961971 - 28962084
Alignment:
Q  90 tcgatgacccgaaaagaattgacggatattatttattccattaaattttgtaaatgttgggatgcctcggtgattttacaatcttgagtgcaattctaga 189  Q
    |||||||||||||| ||||||| ||||||||||| ||||| ||||| |  ||| |||| ||||||||| |||||||||  ||||||||| ||||||||||    
T  28961971 tcgatgacccgaaaggaattgatggatattattttttcca-taaatgt--taagtgtttggatgcctcagtgattttatcatcttgagttcaattctaga 28962067  T
Q  190 cta-gaattgtcactca 205  Q
    ||| |||||||||||||    
T  28962068 ctatgaattgtcactca 28962084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 90 - 205
Target Start/End: Original strand, 28962120 - 28962235
Alignment:
Q  90 tcgatgacccgaaaagaattgacggatattatttattccattaaattttgtaaatgttgggatgcctcggtgattttacaatcttgagtgcaattctaga 189  Q
    |||||||||||||| ||||||| ||||| ||||| | |||| |||| ||| || |||| | |||||||||||||||||  ||||||||||||||||||||    
T  28962120 tcgatgacccgaaaggaattgatggataatatttgtcccat-aaatgttgcaagtgtttgtatgcctcggtgattttatcatcttgagtgcaattctaga 28962218  T
Q  190 c-tagaattgtcactca 205  Q
    | | |||||||||||||    
T  28962219 ctttgaattgtcactca 28962235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 90 - 215
Target Start/End: Original strand, 28961639 - 28961768
Alignment:
Q  90 tcgatgacccgaaaagaattgacggatattatttatt---ccattaaattttgtaaatgttgggatgcctcggtgattttacaatcttgagtgcaattct 186  Q
    |||||||||||||||||||||| ||||||||||| ||   ||  ||||| ||| || |||| || |||||||| |||||||  |||||||||||||||||    
T  28961639 tcgatgacccgaaaagaattgatggatattatttgtttgtcccgtaaatgttgcaagtgtttggttgcctcggcgattttatcatcttgagtgcaattct 28961738  T
Q  187 agac-tagaattgtcactcaaatatgatat 215  Q
    |||| | ||||||||||||| |||| ||||    
T  28961739 agactttgaattgtcactcatatattatat 28961768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 215
Target Start/End: Original strand, 28961550 - 28961635
Alignment:
Q  131 taaattttgtaaatgttgggatgcctcggtgattttacaatcttgagtgcaattctagac-tagaattgtcactcaaatatgatat 215  Q
    ||||| ||| || |||| || |||||||| |||||||  |||||||||||||| |||||| | ||||||||||||| |||| ||||    
T  28961550 taaatgttgcaagtgtttggttgcctcggcgattttatcatcttgagtgcaatactagactttgaattgtcactcatatattatat 28961635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 113 - 204
Target Start/End: Original strand, 28961831 - 28961922
Alignment:
Q  113 ggatattatttattccattaaattttgtaaatgttgggatgcctcggtgattttacaatcttgagtgcaattctagacta-gaattgtcactc 204  Q
    ||||||||||| | |||| |||| ||||||  ||| ||||| |||  ||||||||  |||||||||||||||||||| || ||||||||||||    
T  28961831 ggatattatttgtcccat-aaatgttgtaagcgtttggatggctcactgattttatcatcttgagtgcaattctagaatatgaattgtcactc 28961922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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