View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1126_low_168 (Length: 263)
Name: NF1126_low_168
Description: NF1126
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1126_low_168 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 30 - 263
Target Start/End: Complemental strand, 25600197 - 25599966
Alignment:
| Q |
30 |
gacagcttcgattcaatcattctcaaatagaacgctttagatgcacatcttaattcttatacaaatctacattattatcagtaaacaaaggataatgtga |
129 |
Q |
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| T |
25600197 |
gacagcttcgattcaatcattctcaaatagaacgctctagatgcacatcttaattcttatacaaatctacattattatcagtaaacaaaggataatgtga |
25600098 |
T |
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| Q |
130 |
tactcaaaacctttaatgtgatagaggttggcctgcacaagctgaatttcattagttaggaacgtaatagttattcaatgaagcttgttatatttgattg |
229 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
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| T |
25600097 |
tactcaaaacctttaatgtgatagaggttggcctgcacaagctgaatttcattagttaggaacgtaatagttattcaatgaagcttgttctatttgattg |
25599998 |
T |
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| Q |
230 |
tgcttagcatttttctcaacttttatttgtaact |
263 |
Q |
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|||||||||||||||||||| |||||||||||| |
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| T |
25599997 |
tgcttagcatttttctcaac--ttatttgtaact |
25599966 |
T |
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