View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1126_low_199 (Length: 250)

Name: NF1126_low_199
Description: NF1126
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1126_low_199
NF1126_low_199
[»] chr2 (45 HSPs)
chr2 (122-223)||(20242667-20242768)
chr2 (123-218)||(28596492-28596587)
chr2 (122-223)||(24009314-24009414)
chr2 (124-221)||(2438661-2438758)
chr2 (121-221)||(18840952-18841052)
chr2 (122-215)||(34993922-34994015)
chr2 (172-220)||(5367213-5367261)
chr2 (122-221)||(30404790-30404889)
chr2 (184-221)||(31808097-31808134)
chr2 (168-223)||(18276539-18276594)
chr2 (176-223)||(20922922-20922969)
chr2 (122-221)||(37558997-37559096)
chr2 (166-221)||(40361738-40361793)
chr2 (161-223)||(37411223-37411285)
chr2 (182-223)||(17776605-17776646)
chr2 (190-223)||(21616780-21616813)
chr2 (176-221)||(34691799-34691844)
chr2 (176-221)||(34714211-34714256)
chr2 (182-223)||(38355887-38355928)
chr2 (183-223)||(15909633-15909673)
chr2 (113-221)||(15972893-15973001)
chr2 (183-223)||(18889592-18889632)
chr2 (183-223)||(32749826-32749866)
chr2 (183-223)||(34784983-34785023)
chr2 (187-223)||(35449531-35449567)
chr2 (121-221)||(38117098-38117198)
chr2 (183-223)||(44860338-44860378)
chr2 (189-220)||(28524447-28524478)
chr2 (122-193)||(35056927-35056998)
chr2 (184-223)||(39279693-39279732)
chr2 (167-221)||(5040754-5040808)
chr2 (161-223)||(21091741-21091803)
chr2 (189-223)||(23718044-23718078)
chr2 (189-223)||(24105716-24105750)
chr2 (122-171)||(10535685-10535734)
chr2 (176-221)||(19536391-19536436)
chr2 (184-213)||(22550254-22550283)
chr2 (192-221)||(28677929-28677958)
chr2 (121-186)||(36096303-36096368)
chr2 (191-223)||(2665897-2665929)
chr2 (122-178)||(18054716-18054772)
chr2 (183-223)||(18570990-18571030)
chr2 (175-223)||(18589214-18589262)
chr2 (183-223)||(27447015-27447055)
chr2 (183-223)||(35056886-35056926)
[»] chr3 (53 HSPs)
chr3 (121-223)||(35222956-35223058)
chr3 (122-223)||(13845465-13845566)
chr3 (122-221)||(40993275-40993374)
chr3 (162-223)||(2941576-2941637)
chr3 (129-217)||(3631708-3631796)
chr3 (122-221)||(55401095-55401194)
chr3 (122-221)||(20503485-20503584)
chr3 (122-223)||(11251996-11252095)
chr3 (123-223)||(8789489-8789591)
chr3 (124-219)||(25775531-25775624)
chr3 (176-223)||(49505148-49505195)
chr3 (161-223)||(25093520-25093582)
chr3 (176-221)||(7928470-7928515)
chr3 (161-221)||(10954972-10955032)
chr3 (122-221)||(18426969-18427068)
chr3 (172-222)||(8842348-8842398)
chr3 (177-223)||(20691337-20691383)
chr3 (161-223)||(45451571-45451633)
chr3 (167-223)||(6780404-6780460)
chr3 (177-221)||(10268481-10268525)
chr3 (183-223)||(11313801-11313841)
chr3 (161-221)||(20389636-20389694)
chr3 (124-223)||(24204983-24205082)
chr3 (161-221)||(24633380-24633440)
chr3 (124-221)||(28918021-28918120)
chr3 (176-223)||(8383275-8383322)
chr3 (122-181)||(41961579-41961638)
chr3 (167-217)||(3865698-3865748)
chr3 (189-223)||(10690269-10690303)
chr3 (193-223)||(11493372-11493402)
chr3 (192-222)||(11507485-11507515)
chr3 (177-223)||(13414487-13414533)
chr3 (183-221)||(14209133-14209171)
chr3 (123-193)||(14216951-14217021)
chr3 (123-193)||(14223080-14223150)
chr3 (121-187)||(17005547-17005613)
chr3 (121-187)||(25064972-25065038)
chr3 (183-213)||(26917298-26917328)
chr3 (189-223)||(32804547-32804581)
chr3 (183-221)||(38731238-38731276)
chr3 (183-221)||(39002052-39002090)
chr3 (177-223)||(48202264-48202310)
chr3 (190-223)||(2731830-2731863)
chr3 (162-223)||(7614396-7614456)
chr3 (190-223)||(16192758-16192791)
chr3 (161-221)||(7171521-7171581)
chr3 (183-223)||(8039836-8039876)
chr3 (183-223)||(14028025-14028065)
chr3 (195-223)||(14840304-14840332)
chr3 (161-189)||(16192701-16192729)
chr3 (183-223)||(26290389-26290429)
chr3 (161-221)||(26492184-26492244)
chr3 (189-221)||(29508464-29508496)
[»] chr4 (50 HSPs)
chr4 (122-223)||(35161054-35161155)
chr4 (120-221)||(23292924-23293025)
chr4 (121-221)||(35157924-35158024)
chr4 (161-223)||(8402721-8402783)
chr4 (121-221)||(40179575-40179675)
chr4 (120-223)||(8423656-8423759)
chr4 (122-221)||(49431046-49431145)
chr4 (167-221)||(54580008-54580062)
chr4 (121-193)||(5414100-5414172)
chr4 (121-221)||(28964187-28964287)
chr4 (122-223)||(36635342-36635449)
chr4 (123-221)||(3947702-3947805)
chr4 (140-223)||(9996858-9996941)
chr4 (172-223)||(10499260-10499311)
chr4 (122-221)||(12895214-12895313)
chr4 (122-193)||(22234819-22234890)
chr4 (122-221)||(36509032-36509131)
chr4 (161-221)||(12797317-12797377)
chr4 (147-223)||(19097859-19097935)
chr4 (123-211)||(12323944-12324038)
chr4 (122-221)||(16073414-16073513)
chr4 (154-221)||(38846984-38847051)
chr4 (122-192)||(24613630-24613700)
chr4 (121-223)||(30103296-30103397)
chr4 (189-223)||(40613468-40613502)
chr4 (186-223)||(903940-903977)
chr4 (182-223)||(5775358-5775399)
chr4 (161-221)||(2361954-2362014)
chr4 (175-211)||(20950420-20950456)
chr4 (191-223)||(22440609-22440641)
chr4 (161-221)||(29205464-29205524)
chr4 (122-221)||(34306744-34306843)
chr4 (122-181)||(19482739-19482798)
chr4 (189-223)||(13134468-13134502)
chr4 (189-223)||(16189727-16189761)
chr4 (135-221)||(21945523-21945609)
chr4 (122-221)||(23861369-23861470)
chr4 (177-223)||(33950154-33950200)
chr4 (119-193)||(46083917-46083991)
chr4 (190-223)||(18576045-18576078)
chr4 (183-216)||(35723385-35723418)
chr4 (176-221)||(42640549-42640594)
chr4 (161-221)||(4157169-4157229)
chr4 (161-221)||(4157456-4157516)
chr4 (183-223)||(6933293-6933333)
chr4 (190-218)||(15029788-15029816)
chr4 (189-221)||(22234897-22234929)
chr4 (183-223)||(30982879-30982919)
chr4 (183-223)||(44132645-44132685)
chr4 (183-223)||(46160914-46160954)
[»] chr1 (63 HSPs)
chr1 (123-219)||(12918967-12919063)
chr1 (124-222)||(29163323-29163421)
chr1 (123-221)||(40258874-40258972)
chr1 (122-223)||(30749858-30749959)
chr1 (122-223)||(30771309-30771410)
chr1 (123-223)||(10577676-10577776)
chr1 (122-221)||(5898206-5898305)
chr1 (122-221)||(18337349-18337448)
chr1 (122-221)||(37598852-37598950)
chr1 (122-223)||(7918154-7918252)
chr1 (183-223)||(25361904-25361944)
chr1 (159-223)||(36878479-36878543)
chr1 (167-223)||(40181889-40181945)
chr1 (122-221)||(51410045-51410144)
chr1 (122-221)||(38078601-38078700)
chr1 (115-221)||(18190041-18190147)
chr1 (122-223)||(2896061-2896162)
chr1 (121-221)||(22515826-22515926)
chr1 (121-221)||(46348322-46348422)
chr1 (161-221)||(1815277-1815337)
chr1 (122-194)||(32461393-32461465)
chr1 (183-223)||(34371731-34371771)
chr1 (183-223)||(44482248-44482288)
chr1 (184-223)||(1864882-1864921)
chr1 (184-223)||(10233271-10233310)
chr1 (171-222)||(17705576-17705626)
chr1 (122-193)||(25934675-25934746)
chr1 (124-221)||(1486646-1486748)
chr1 (177-223)||(2784574-2784620)
chr1 (167-221)||(13997903-13997957)
chr1 (177-223)||(23636044-23636090)
chr1 (161-223)||(43492473-43492535)
chr1 (174-223)||(14332634-14332683)
chr1 (190-223)||(25098563-25098596)
chr1 (124-221)||(42359391-42359488)
chr1 (176-221)||(52903269-52903314)
chr1 (176-220)||(13436479-13436523)
chr1 (191-223)||(19324580-19324612)
chr1 (183-223)||(20157351-20157391)
chr1 (167-223)||(28674818-28674874)
chr1 (183-223)||(34712384-34712424)
chr1 (176-223)||(9709838-9709885)
chr1 (122-193)||(9828103-9828174)
chr1 (183-221)||(5944303-5944341)
chr1 (183-221)||(9828064-9828102)
chr1 (121-187)||(18556384-18556450)
chr1 (122-211)||(27965940-27966027)
chr1 (183-221)||(35919277-35919315)
chr1 (169-223)||(39130754-39130808)
chr1 (177-223)||(39953141-39953187)
chr1 (190-223)||(6427368-6427401)
chr1 (184-221)||(17754331-17754368)
chr1 (172-221)||(22881606-22881655)
chr1 (168-221)||(26830608-26830660)
chr1 (190-223)||(36906015-36906048)
chr1 (189-221)||(398772-398804)
chr1 (191-223)||(12443469-12443501)
chr1 (183-223)||(21038101-21038141)
chr1 (183-223)||(25272500-25272540)
chr1 (195-223)||(34298454-34298482)
chr1 (183-223)||(38503338-38503378)
chr1 (122-194)||(41597410-41597482)
chr1 (121-193)||(47989556-47989628)
[»] chr8 (43 HSPs)
chr8 (124-223)||(3025569-3025668)
chr8 (122-221)||(3951476-3951575)
chr8 (123-222)||(43737752-43737851)
chr8 (122-223)||(14134717-14134818)
chr8 (124-223)||(20679337-20679436)
chr8 (122-223)||(26902104-26902216)
chr8 (161-223)||(33405363-33405425)
chr8 (119-193)||(34450958-34451032)
chr8 (168-223)||(4786324-4786379)
chr8 (122-221)||(36450694-36450793)
chr8 (144-221)||(31557016-31557093)
chr8 (167-219)||(9414860-9414912)
chr8 (167-223)||(40332209-40332265)
chr8 (124-223)||(926730-926829)
chr8 (135-218)||(8293848-8293931)
chr8 (122-221)||(18407739-18407838)
chr8 (183-221)||(11927087-11927125)
chr8 (177-223)||(13844591-13844637)
chr8 (189-223)||(34897103-34897137)
chr8 (166-223)||(37283796-37283851)
chr8 (167-204)||(126332-126369)
chr8 (183-220)||(8847277-8847314)
chr8 (190-223)||(11803277-11803310)
chr8 (178-223)||(12606825-12606870)
chr8 (122-215)||(24413499-24413592)
chr8 (183-219)||(24362203-24362239)
chr8 (175-223)||(31236570-31236618)
chr8 (184-223)||(18964195-18964234)
chr8 (175-221)||(4948672-4948718)
chr8 (183-221)||(11944685-11944723)
chr8 (167-221)||(20873089-20873143)
chr8 (189-223)||(27213565-27213599)
chr8 (182-220)||(28384994-28385032)
chr8 (161-223)||(38079017-38079079)
chr8 (122-223)||(39820447-39820547)
chr8 (190-223)||(14731730-14731763)
chr8 (176-213)||(22204669-22204706)
chr8 (123-192)||(29447040-29447109)
chr8 (126-223)||(31580071-31580168)
chr8 (182-223)||(33382019-33382060)
chr8 (127-223)||(31109463-31109559)
chr8 (189-221)||(34222967-34222999)
chr8 (191-223)||(39954288-39954320)
[»] chr6 (55 HSPs)
chr6 (122-221)||(34595154-34595253)
chr6 (123-223)||(9658897-9658998)
chr6 (121-221)||(28152118-28152218)
chr6 (122-223)||(17327590-17327696)
chr6 (161-221)||(33001268-33001328)
chr6 (172-223)||(19040370-19040421)
chr6 (122-221)||(28715315-28715414)
chr6 (122-223)||(7377997-7378098)
chr6 (122-223)||(4388103-4388199)
chr6 (170-222)||(7740660-7740712)
chr6 (16-56)||(11968709-11968749)
chr6 (124-223)||(7265535-7265634)
chr6 (121-223)||(13360312-13360413)
chr6 (122-221)||(13789174-13789273)
chr6 (122-221)||(13797793-13797892)
chr6 (122-193)||(18367895-18367966)
chr6 (108-223)||(32511592-32511707)
chr6 (183-223)||(9025495-9025535)
chr6 (121-193)||(16488518-16488590)
chr6 (161-221)||(24645501-24645561)
chr6 (122-217)||(4877967-4878061)
chr6 (139-221)||(12627534-12627616)
chr6 (122-221)||(16833328-16833427)
chr6 (123-221)||(17841530-17841628)
chr6 (165-223)||(30851620-30851676)
chr6 (183-221)||(7027262-7027300)
chr6 (189-223)||(11591877-11591911)
chr6 (124-221)||(12696344-12696446)
chr6 (161-223)||(13364684-13364746)
chr6 (189-223)||(26562707-26562741)
chr6 (92-125)||(11968749-11968782)
chr6 (168-221)||(29020932-29020985)
chr6 (167-223)||(31579212-31579266)
chr6 (183-223)||(9617452-9617492)
chr6 (183-223)||(9629401-9629441)
chr6 (176-223)||(5732504-5732551)
chr6 (184-223)||(7086813-7086852)
chr6 (182-221)||(8101105-8101144)
chr6 (185-223)||(10339128-10339167)
chr6 (122-220)||(6898221-6898319)
chr6 (183-213)||(9750450-9750480)
chr6 (187-221)||(17341669-17341703)
chr6 (177-223)||(21924930-21924976)
chr6 (189-223)||(30866151-30866185)
chr6 (183-221)||(31384940-31384978)
chr6 (124-218)||(32298549-32298643)
chr6 (125-223)||(7996325-7996419)
chr6 (125-223)||(8022382-8022476)
chr6 (182-223)||(19044482-19044523)
chr6 (177-221)||(1700372-1700416)
chr6 (122-221)||(7977770-7977869)
chr6 (183-223)||(9024177-9024217)
chr6 (183-219)||(9027200-9027236)
chr6 (183-223)||(9195755-9195795)
chr6 (183-223)||(34073348-34073388)
[»] chr5 (44 HSPs)
chr5 (121-219)||(30098977-30099075)
chr5 (122-221)||(21576685-21576784)
chr5 (122-223)||(42029770-42029871)
chr5 (122-221)||(43564901-43565000)
chr5 (122-223)||(28588614-28588715)
chr5 (135-223)||(26312787-26312875)
chr5 (124-223)||(30502330-30502429)
chr5 (124-223)||(30542673-30542772)
chr5 (124-221)||(21190998-21191095)
chr5 (168-223)||(12927672-12927727)
chr5 (122-221)||(42893380-42893479)
chr5 (123-193)||(6401557-6401627)
chr5 (122-223)||(27932253-27932354)
chr5 (162-223)||(32630715-32630776)
chr5 (167-223)||(18421826-18421882)
chr5 (121-193)||(21814320-21814392)
chr5 (161-223)||(23012387-23012449)
chr5 (121-191)||(30098387-30098457)
chr5 (189-223)||(39758290-39758324)
chr5 (189-223)||(41091264-41091298)
chr5 (190-223)||(6471897-6471930)
chr5 (167-223)||(6770561-6770615)
chr5 (172-221)||(15884008-15884057)
chr5 (183-223)||(3966521-3966561)
chr5 (191-223)||(24273039-24273071)
chr5 (191-223)||(24389143-24389175)
chr5 (172-223)||(16203785-16203836)
chr5 (172-223)||(21194195-21194246)
chr5 (171-221)||(6247642-6247692)
chr5 (122-223)||(14873535-14873641)
chr5 (121-223)||(17123066-17123167)
chr5 (189-223)||(23015996-23016030)
chr5 (183-221)||(39698561-39698599)
chr5 (182-223)||(12264829-12264870)
chr5 (122-223)||(21194063-21194164)
chr5 (181-222)||(23287348-23287389)
chr5 (126-218)||(4105282-4105374)
chr5 (189-221)||(5467985-5468017)
chr5 (124-223)||(7997108-7997207)
chr5 (183-223)||(17925173-17925213)
chr5 (183-223)||(32426870-32426910)
chr5 (183-223)||(36838561-36838601)
chr5 (183-223)||(41558655-41558695)
chr5 (173-213)||(42126311-42126351)
[»] chr7 (42 HSPs)
chr7 (122-223)||(18212973-18213074)
chr7 (122-223)||(21880170-21880271)
chr7 (122-223)||(598226-598327)
chr7 (121-223)||(5835265-5835367)
chr7 (123-220)||(18035806-18035902)
chr7 (123-223)||(32287404-32287504)
chr7 (144-223)||(39138462-39138541)
chr7 (142-223)||(27093373-27093454)
chr7 (142-223)||(27184847-27184928)
chr7 (172-220)||(640134-640182)
chr7 (161-221)||(15680829-15680889)
chr7 (172-223)||(22868060-22868111)
chr7 (162-223)||(20549809-20549870)
chr7 (123-223)||(22484043-22484143)
chr7 (183-223)||(5548694-5548734)
chr7 (183-223)||(22602711-22602751)
chr7 (167-223)||(23191914-23191969)
chr7 (141-221)||(26733324-26733404)
chr7 (183-223)||(32308138-32308178)
chr7 (172-223)||(9482952-9483003)
chr7 (184-223)||(17851449-17851488)
chr7 (122-221)||(42720830-42720929)
chr7 (183-221)||(18013075-18013113)
chr7 (121-221)||(32093953-32094059)
chr7 (122-221)||(5409771-5409875)
chr7 (122-217)||(33994236-33994331)
chr7 (173-223)||(2424632-2424685)
chr7 (176-223)||(3721111-3721158)
chr7 (161-223)||(12278853-12278915)
chr7 (173-223)||(1401043-1401093)
chr7 (177-223)||(4909169-4909215)
chr7 (189-223)||(27732246-27732280)
chr7 (184-221)||(15902842-15902879)
chr7 (190-223)||(17307911-17307944)
chr7 (178-223)||(24146834-24146879)
chr7 (122-187)||(43027404-43027469)
chr7 (183-223)||(7328692-7328732)
chr7 (191-223)||(16341514-16341546)
chr7 (183-223)||(19206068-19206108)
chr7 (183-223)||(19992019-19992059)
chr7 (161-221)||(21864828-21864888)
chr7 (177-221)||(38143243-38143287)
[»] scaffold0050 (1 HSPs)
scaffold0050 (125-221)||(70298-70394)
[»] scaffold0652 (1 HSPs)
scaffold0652 (123-221)||(403-501)
[»] scaffold0022 (1 HSPs)
scaffold0022 (121-223)||(90861-90963)
[»] scaffold0083 (1 HSPs)
scaffold0083 (161-215)||(45509-45563)
[»] scaffold0171 (2 HSPs)
scaffold0171 (183-221)||(23531-23569)
scaffold0171 (183-221)||(23440-23478)
[»] scaffold0123 (1 HSPs)
scaffold0123 (189-223)||(44532-44566)
[»] scaffold0003 (2 HSPs)
scaffold0003 (122-187)||(241659-241724)
scaffold0003 (177-221)||(348122-348166)
[»] scaffold0279 (1 HSPs)
scaffold0279 (167-223)||(17788-17844)
[»] scaffold0036 (1 HSPs)
scaffold0036 (183-223)||(9748-9788)
[»] scaffold0020 (1 HSPs)
scaffold0020 (183-223)||(135313-135353)
[»] scaffold0008 (1 HSPs)
scaffold0008 (183-223)||(263373-263413)
[»] scaffold0361 (1 HSPs)
scaffold0361 (161-221)||(14550-14607)
[»] scaffold0306 (1 HSPs)
scaffold0306 (124-223)||(13418-13523)
[»] scaffold0223 (1 HSPs)
scaffold0223 (183-221)||(20192-20230)
[»] scaffold0152 (1 HSPs)
scaffold0152 (124-223)||(21804-21909)
[»] scaffold0136 (1 HSPs)
scaffold0136 (183-221)||(3850-3888)
[»] scaffold0044 (1 HSPs)
scaffold0044 (189-223)||(53198-53232)
[»] scaffold1528 (1 HSPs)
scaffold1528 (184-221)||(1055-1092)
[»] scaffold0475 (1 HSPs)
scaffold0475 (122-211)||(3338-3427)
[»] scaffold0623 (1 HSPs)
scaffold0623 (183-223)||(5997-6037)
[»] scaffold0236 (1 HSPs)
scaffold0236 (183-223)||(25769-25809)
[»] scaffold0053 (1 HSPs)
scaffold0053 (161-221)||(8818-8878)


Alignment Details
Target: chr2 (Bit Score: 66; Significance: 3e-29; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 122 - 223
Target Start/End: Original strand, 20242667 - 20242768
Alignment:
Q  122 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 221  Q
    |||||||||||  |||||  |||||||||| |||| |||||||||||||||||| ||||| ||||| |||||||||||||||||||||||||||||||||    
T  20242667 ctatgaagcacagacactcttcggataaggcgtgtcctcgtgtcagacacgtgttgtgtccgacaccgacacatataattacactgaattatgtgatttt 20242766  T
Q  222 ct 223  Q
    ||    
T  20242767 ct 20242768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 123 - 218
Target Start/End: Complemental strand, 28596587 - 28596492
Alignment:
Q  123 tatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgat 218  Q
    ||||||||||| ||||| ||||||| |||||||| |  ||||| ||||||||||||||| ||||| ||||| |||||||||||||| |||||||||    
T  28596587 tatgaagcacggacactcctcggattaggagtgtccgagtgtcggacacgtgtcgtgtccgacaccgacacttataattacactgacttatgtgat 28596492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 122 - 223
Target Start/End: Complemental strand, 24009414 - 24009314
Alignment:
Q  122 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 221  Q
    |||||||||||| ||||| || |||||||| |||| | |||||||||||||||||||||| ||||| |||||||| | |||||||| ||| |||||||||    
T  24009414 ctatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacata-atttacactgcattttgtgatttt 24009316  T
Q  222 ct 223  Q
    ||    
T  24009315 ct 24009314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 124 - 221
Target Start/End: Original strand, 2438661 - 2438758
Alignment:
Q  124 atgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 221  Q
    |||||||||| ||||| ||||||| ||| |||| |  ||||| |||| |||||||||| ||||| ||||| | |||||||||||||||||||||||||    
T  2438661 atgaagcacggacactcctcggattaggcgtgtcccggtgtcggacatgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtgatttt 2438758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 121 - 221
Target Start/End: Original strand, 18840952 - 18841052
Alignment:
Q  121 actatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgattt 220  Q
    ||||||||||||| ||||| ||||||| ||| |||| |  ||||| |||| |||||||||||||||| ||||| | |||||||||| |||||||| ||||    
T  18840952 actatgaagcacggacactcctcggattaggtgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacacttgtaattacacttaattatgtaattt 18841051  T
Q  221 t 221  Q
    |    
T  18841052 t 18841052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 122 - 215
Target Start/End: Original strand, 34993922 - 34994015
Alignment:
Q  122 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgt 215  Q
    |||||||||||||||||| || | || ||| |||| |  ||||| ||||| ||||||||  |||||||||||||||||||||| ||||||||||    
T  34993922 ctatgaagcacgaacactccttgaattaggcgtgtcccagtgtcggacacatgtcgtgttcgacactgacacatataattacattgaattatgt 34994015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 172 - 220
Target Start/End: Complemental strand, 5367261 - 5367213
Alignment:
Q  172 gtgtcgtgtctgacactgacacatataattacactgaattatgtgattt 220  Q
    |||||||||| ||||| ||||||||||||||||||||||||||||||||    
T  5367261 gtgtcgtgtccgacaccgacacatataattacactgaattatgtgattt 5367213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 122 - 221
Target Start/End: Original strand, 30404790 - 30404889
Alignment:
Q  122 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 221  Q
    ||||||||||| ||| |||||| ||| |||  ||| || ||||| |||| |||||||||| ||| | ||||| | |||||||||||||||||||||||||    
T  30404790 ctatgaagcacaaacgcttctcagattaggcatgtcctggtgtcggacatgtgtcgtgtccgacgccgacacttgtaattacactgaattatgtgatttt 30404889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 184 - 221
Target Start/End: Complemental strand, 31808134 - 31808097
Alignment:
Q  184 acactgacacatataattacactgaattatgtgatttt 221  Q
    ||||||||||||||||||||||||||||||||||||||    
T  31808134 acactgacacatataattacactgaattatgtgatttt 31808097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 223
Target Start/End: Complemental strand, 18276594 - 18276539
Alignment:
Q  168 acacgtgtcgtgtctgacactgacacatataattacactgaattatgtgattttct 223  Q
    |||||||| || |||||||| |||||| ||||||||||||||||| ||||||||||    
T  18276594 acacgtgtggtatctgacaccgacacacataattacactgaattaagtgattttct 18276539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 176 - 223
Target Start/End: Original strand, 20922922 - 20922969
Alignment:
Q  176 cgtgtctgacactgacacatataattacactgaattatgtgattttct 223  Q
    |||||| ||||| |||||||||||||||||| ||||||||||||||||    
T  20922922 cgtgtccgacacagacacatataattacactaaattatgtgattttct 20922969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 122 - 221
Target Start/End: Complemental strand, 37559096 - 37558997
Alignment:
Q  122 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 221  Q
    |||||||||||| ||||| ||||||| | | |||| |  ||||| ||||||||||  ||| ||||| ||||| | |||||||| ||||||||||||||||    
T  37559096 ctatgaagcacggacactcctcggattaagcgtgtaccggtgtcggacacgtgtcaagtccgacaccgacacttgtaattacattgaattatgtgatttt 37558997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 221
Target Start/End: Original strand, 40361738 - 40361793
Alignment:
Q  166 agacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 221  Q
    ||||||||||||||||||||||  ||| ||||||||||||| |||||||| |||||    
T  40361738 agacacgtgtcgtgtctgacaccaacagatataattacactaaattatgtaatttt 40361793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 161 - 223
Target Start/End: Original strand, 37411223 - 37411285
Alignment:
Q  161 gtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgattttct 223  Q
    ||||| |||||| |||||||  ||||  |||||||||||| ||||||||||||||||||||||    
T  37411223 gtgtcggacacgcgtcgtgttcgacatcgacacatataatcacactgaattatgtgattttct 37411285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 223
Target Start/End: Complemental strand, 17776646 - 17776605
Alignment:
Q  182 tgacactgacacatataattacactgaattatgtgattttct 223  Q
    ||||||||||||||||||||||||||| ||||||| ||||||    
T  17776646 tgacactgacacatataattacactgacttatgtggttttct 17776605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 223
Target Start/End: Complemental strand, 21616813 - 21616780
Alignment:
Q  190 acacatataattacactgaattatgtgattttct 223  Q
    ||||||||||||||||||||||||||||||||||    
T  21616813 acacatataattacactgaattatgtgattttct 21616780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 221
Target Start/End: Original strand, 34691799 - 34691844
Alignment:
Q  176 cgtgtctgacactgacacatataattacactgaattatgtgatttt 221  Q
    |||||| ||||| ||||||||||||||||||||||||| |||||||    
T  34691799 cgtgtccgacaccgacacatataattacactgaattatatgatttt 34691844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 221
Target Start/End: Original strand, 34714211 - 34714256
Alignment:
Q  176 cgtgtctgacactgacacatataattacactgaattatgtgatttt 221  Q
    |||||| ||||| ||||||||||||||||||||||||| |||||||    
T  34714211 cgtgtccgacaccgacacatataattacactgaattatatgatttt 34714256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 223
Target Start/End: Original strand, 38355887 - 38355928
Alignment:
Q  182 tgacactgacacatataattacactgaattatgtgattttct 223  Q
    |||||| |||||||||||| ||||||||||||||||||||||    
T  38355887 tgacaccgacacatataatcacactgaattatgtgattttct 38355928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 183 - 223
Target Start/End: Original strand, 15909633 - 15909673
Alignment:
Q  183 gacactgacacatataattacactgaattatgtgattttct 223  Q
    ||||||| ||||||||||||||||||||||||| |||||||    
T  15909633 gacactgtcacatataattacactgaattatgtaattttct 15909673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 221
Target Start/End: Complemental strand, 15973001 - 15972893
Alignment:
Q  113 agttggacactatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaatta 212  Q
    ||||| || |||||||||||| ||| |  |||||| ||| |||| |  | ||| ||||||||||||||| ||||| ||||| | |||||||||||||||     
T  15973001 agttgcaccctatgaagcacggacattcttcggattaggtgtgtcccggcgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactgaattg 15972902  T
Q  213 tgtgatttt 221  Q
    ||| |||||    
T  15972901 tgtaatttt 15972893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 183 - 223
Target Start/End: Original strand, 18889592 - 18889632
Alignment:
Q  183 gacactgacacatataattacactgaattatgtgattttct 223  Q
    ||||| ||||||||| |||||||||||||||||||||||||    
T  18889592 gacaccgacacatatgattacactgaattatgtgattttct 18889632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 183 - 223
Target Start/End: Original strand, 32749826 - 32749866
Alignment:
Q  183 gacactgacacatataattacactgaattatgtgattttct 223  Q
    ||||||||||| ||| |||||||||||||||||||||||||    
T  32749826 gacactgacacttattattacactgaattatgtgattttct 32749866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 183 - 223
Target Start/End: Original strand, 34784983 - 34785023
Alignment:
Q  183 gacactgacacatataattacactgaattatgtgattttct 223  Q
    ||||| |||||||||||||||||| ||||||||||||||||    
T  34784983 gacaccgacacatataattacactaaattatgtgattttct 34785023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 187 - 223
Target Start/End: Complemental strand, 35449567 - 35449531
Alignment:
Q  187 ctgacacatataattacactgaattatgtgattttct 223  Q
    ||||||||||||||||||||||||| |||||||||||    
T  35449567 ctgacacatataattacactgaattctgtgattttct 35449531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 221
Target Start/End: Original strand, 38117098 - 38117198
Alignment:
Q  121 actatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgattt 220  Q
    ||||||||||||| ||||  ||||||| ||| |||| |  ||||| ||||||||| ||||| |||||  |||| | ||||||||| ||| ||||||||||    
T  38117098 actatgaagcacggacacccctcggattaggcgtgtcccggtgtcggacacgtgttgtgtccgacaccaacacttgtaattacaccgaagtatgtgattt 38117197  T
Q  221 t 221  Q
    |    
T  38117198 t 38117198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 183 - 223
Target Start/End: Complemental strand, 44860378 - 44860338
Alignment:
Q  183 gacactgacacatataattacactgaattatgtgattttct 223  Q
    ||||| |||||||||||||||||||||||||| ||||||||    
T  44860378 gacaccgacacatataattacactgaattatgcgattttct 44860338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 189 - 220
Target Start/End: Complemental strand, 28524478 - 28524447
Alignment:
Q  189 gacacatataattacactgaattatgtgattt 220  Q
    ||||||||||||||||||||||||||||||||    
T  28524478 gacacatataattacactgaattatgtgattt 28524447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 122 - 193
Target Start/End: Complemental strand, 35056998 - 35056927
Alignment:
Q  122 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacac 193  Q
    |||||||||||| ||||| ||| ||| ||| |||||  |||||| ||||||||||||||| ||||| |||||    
T  35056998 ctatgaagcacggacactcctcagattaggcgtgtttccgtgtcggacacgtgtcgtgtccgacaccgacac 35056927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 184 - 223
Target Start/End: Complemental strand, 39279732 - 39279693
Alignment:
Q  184 acactgacacatataattacactgaattatgtgattttct 223  Q
    |||| ||||||||||||||||||||||||| |||||||||    
T  39279732 acaccgacacatataattacactgaattatttgattttct 39279693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 221
Target Start/End: Complemental strand, 5040808 - 5040754
Alignment:
Q  167 gacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 221  Q
    ||||| ||||||||| ||||| ||||| | |||||||| ||||||||||||||||    
T  5040808 gacacatgtcgtgtccgacaccgacacttgtaattacattgaattatgtgatttt 5040754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 223
Target Start/End: Complemental strand, 21091803 - 21091741
Alignment:
Q  161 gtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgattttct 223  Q
    ||||| |||| ||| | |||||||||||||||| | ||||||||||||| ||||| |||||||    
T  21091803 gtgtccgacaggtggcttgtctgacactgacacttgtaattacactgaagtatgttattttct 21091741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 223
Target Start/End: Complemental strand, 23718078 - 23718044
Alignment:
Q  189 gacacatataattacactgaattatgtgattttct 223  Q
    ||||||||||||||||||||||||||||| |||||    
T  23718078 gacacatataattacactgaattatgtgactttct 23718044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 223
Target Start/End: Complemental strand, 24105750 - 24105716
Alignment:
Q  189 gacacatataattacactgaattatgtgattttct 223  Q
    ||||||||||||||||||||||||||||| |||||    
T  24105750 gacacatataattacactgaattatgtgactttct 24105716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 122 - 171
Target Start/End: Original strand, 10535685 - 10535734
Alignment:
Q  122 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacac 171  Q
    |||||||||||||||||| ||||||| ||| |||| || |||||||||||    
T  10535685 ctatgaagcacgaacactcctcggattaggcgtgtcctggtgtcagacac 10535734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 176 - 221
Target Start/End: Original strand, 19536391 - 19536436
Alignment:
Q  176 cgtgtctgacactgacacatataattacactgaattatgtgatttt 221  Q
    |||||| ||||| ||||| | |||||||||||||||||||||||||    
T  19536391 cgtgtccgacaccgacacttgtaattacactgaattatgtgatttt 19536436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 184 - 213
Target Start/End: Original strand, 22550254 - 22550283
Alignment:
Q  184 acactgacacatataattacactgaattat 213  Q
    ||||||||||||||||||||||||||||||    
T  22550254 acactgacacatataattacactgaattat 22550283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 192 - 221
Target Start/End: Complemental strand, 28677958 - 28677929
Alignment:
Q  192 acatataattacactgaattatgtgatttt 221  Q
    ||||||||||||||||||||||||||||||    
T  28677958 acatataattacactgaattatgtgatttt 28677929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 121 - 186
Target Start/End: Original strand, 36096303 - 36096368
Alignment:
Q  121 actatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgaca 186  Q
    ||||||||||||| |||||  | || ||||| |||| | |||||||||||||||||||||| ||||    
T  36096303 actatgaagcacggacactctttggttaaggcgtgtccccgtgtcagacacgtgtcgtgtccgaca 36096368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 191 - 223
Target Start/End: Original strand, 2665897 - 2665929
Alignment:
Q  191 cacatataattacactgaattatgtgattttct 223  Q
    |||||||||||||||| ||||||||||||||||    
T  2665897 cacatataattacactaaattatgtgattttct 2665929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 178
Target Start/End: Original strand, 18054716 - 18054772
Alignment:
Q  122 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgt 178  Q
    |||||||||||| ||| | || |||||||| |||||  |||||||||||||||||||    
T  18054716 ctatgaagcacggacattccttggataaggcgtgtttccgtgtcagacacgtgtcgt 18054772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 223
Target Start/End: Complemental strand, 18571030 - 18570990
Alignment:
Q  183 gacactgacacatataattacactgaattatgtgattttct 223  Q
    ||||||||||||||| |||||| |||||||||| |||||||    
T  18571030 gacactgacacatatgattacattgaattatgtcattttct 18570990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 175 - 223
Target Start/End: Complemental strand, 18589262 - 18589214
Alignment:
Q  175 tcgtgtctgacactgacacatataattacactgaattatgtgattttct 223  Q
    ||||||| |||||||||||||||| ||| |||||||| ||| |||||||    
T  18589262 tcgtgtccgacactgacacatatagttagactgaattgtgtaattttct 18589214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 223
Target Start/End: Original strand, 27447015 - 27447055
Alignment:
Q  183 gacactgacacatataattacactgaattatgtgattttct 223  Q
    |||||||||||| ||||||||||||||||||| ||| ||||    
T  27447015 gacactgacacaaataattacactgaattatgggatcttct 27447055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 223
Target Start/End: Complemental strand, 35056926 - 35056886
Alignment:
Q  183 gacactgacacatataattacactgaattatgtgattttct 223  Q
    ||||| ||||||||||||||||||||||||| || ||||||    
T  35056926 gacaccgacacatataattacactgaattatatggttttct 35056886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 63; Significance: 2e-27; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 121 - 223
Target Start/End: Complemental strand, 35223058 - 35222956
Alignment:
Q  121 actatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgattt 220  Q
    ||||||||||||| ||||| ||||||||| | |||| | ||||||||||||||||| |||| ||||| |||||||||||||||| |||||||||||||||    
T  35223058 actatgaagcacggacactcctcggataaagcgtgtccccgtgtcagacacgtgtcatgtccgacaccgacacatataattacattgaattatgtgattt 35222959  T
Q  221 tct 223  Q
    |||    
T  35222958 tct 35222956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 122 - 223
Target Start/End: Original strand, 13845465 - 13845566
Alignment:
Q  122 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 221  Q
    |||||||||||| ||||| || |||||||| ||||   |||||||||||||| ||||||| ||||| ||||||||||||||||||| ||| |||||||||    
T  13845465 ctatgaagcacggacactccttggataaggcgtgtctccgtgtcagacacgtctcgtgtccgacaccgacacatataattacactgcattttgtgatttt 13845564  T
Q  222 ct 223  Q
    ||    
T  13845565 ct 13845566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 122 - 221
Target Start/End: Original strand, 40993275 - 40993374
Alignment:
Q  122 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 221  Q
    |||||||||| | ||||| ||||||| ||| |||| |  ||||| |||| |||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  40993275 ctatgaagcatggacactcctcggattaggcgtgtcccggtgtcggacatgtgtcgtgtccgacaccgacacatataattacactgaattatgtgatttt 40993374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 162 - 223
Target Start/End: Complemental strand, 2941637 - 2941576
Alignment:
Q  162 tgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgattttct 223  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||| ||| |||||||||||    
T  2941637 tgtcagacacgtgtcgtgtccgacaccgacacatataattacactgtattttgtgattttct 2941576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 129 - 217
Target Start/End: Complemental strand, 3631796 - 3631708
Alignment:
Q  129 gcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtga 217  Q
    ||||| ||||| ||||||  ||| |||| || ||||| |||| |||||||||| ||||||| |||||||||||||||||||||||||||    
T  3631796 gcacggacactcctcggactaggcgtgtcctggtgtcggacatgtgtcgtgtccgacactggcacatataattacactgaattatgtga 3631708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 122 - 221
Target Start/End: Complemental strand, 55401194 - 55401095
Alignment:
Q  122 ctatgaagcacgaacacttctcggataaggagtgttctcg-tgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgattt 220  Q
    |||||||||||| ||||| ||||||| ||| |||| |||| |||| ||||||||||||||| ||||| ||||| | |||||||||| |||||||||||||    
T  55401194 ctatgaagcacggacactcctcggattaggcgtgt-ctcggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactaaattatgtgattt 55401096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 122 - 221
Target Start/End: Complemental strand, 20503584 - 20503485
Alignment:
Q  122 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 221  Q
    |||||||||||| ||||| ||||||| ||| |||| |  |||||||||| ||||||||||  |||| ||||| | ||||||||||||||||||| |||||    
T  20503584 ctatgaagcacggacactcctcggattaggcgtgtcccggtgtcagacatgtgtcgtgtccaacaccgacacttgtaattacactgaattatgtcatttt 20503485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 122 - 223
Target Start/End: Complemental strand, 11252095 - 11251996
Alignment:
Q  122 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 221  Q
    |||||||||||  ||||| ||||||| ||| ||||||   || | ||||||||| ||||||||||| ||||||||  |||||||||||||||||||||||    
T  11252095 ctatgaagcacagacactcctcggattaggcgtgttccgatgccggacacgtgttgtgtctgacaccgacacata--attacactgaattatgtgatttt 11251998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 123 - 223
Target Start/End: Original strand, 8789489 - 8789591
Alignment:
Q  123 tatgaagcacgaacacttctcggataaggagtgttctc-gtgtcagaca--cgtgtcgtgtctgacactgacacatataattacactgaattatgtgatt 219  Q
    ||||||||||| ||||| ||||||| ||| ||| |||| ||||| ||||   |||||||||| ||||| ||||||||||||||||| |||||||||||||    
T  8789489 tatgaagcacggacactcctcggattaggcgtg-tctcggtgtccgacatgtgtgtcgtgtccgacaccgacacatataattacacggaattatgtgatt 8789587  T
Q  220 ttct 223  Q
    ||||    
T  8789588 ttct 8789591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 124 - 219
Target Start/End: Complemental strand, 25775624 - 25775531
Alignment:
Q  124 atgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatt 219  Q
    |||||||||||||||| ||||||| ||| |||| || ||||| ||||||   |||||| ||||| ||||| | |||||||||||||||||||||||    
T  25775624 atgaagcacgaacactcctcggattaggcgtgtcctggtgtcggacacga--cgtgtccgacaccgacacttgtaattacactgaattatgtgatt 25775531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 176 - 223
Target Start/End: Original strand, 49505148 - 49505195
Alignment:
Q  176 cgtgtctgacactgacacatataattacactgaattatgtgattttct 223  Q
    |||||| |||||||||||||||||||||||| ||||||||||||||||    
T  49505148 cgtgtccgacactgacacatataattacactaaattatgtgattttct 49505195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 161 - 223
Target Start/End: Complemental strand, 25093582 - 25093520
Alignment:
Q  161 gtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgattttct 223  Q
    ||||| |||| |||| ||||| ||||| ||||||||||||||||||||||| |||||||||||    
T  25093582 gtgtcggacatgtgttgtgtccgacaccgacacatataattacactgaattgtgtgattttct 25093520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 176 - 221
Target Start/End: Complemental strand, 7928515 - 7928470
Alignment:
Q  176 cgtgtctgacactgacacatataattacactgaattatgtgatttt 221  Q
    |||||| ||||| |||||||||||||||||||||||||||||||||    
T  7928515 cgtgtccgacaccgacacatataattacactgaattatgtgatttt 7928470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 161 - 221
Target Start/End: Complemental strand, 10955032 - 10954972
Alignment:
Q  161 gtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 221  Q
    ||||| ||||||||||||||| ||||| ||||| | | |||||||||||||||||||||||    
T  10955032 gtgtcggacacgtgtcgtgtccgacaccgacacttgtgattacactgaattatgtgatttt 10954972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 122 - 221
Target Start/End: Complemental strand, 18427068 - 18426969
Alignment:
Q  122 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 221  Q
    ||||||| |||| ||||| ||| ||| ||| |||| |  ||| | |||||||||||| || ||||| |||| |||||||||||| |||||||||||||||    
T  18427068 ctatgaaacacggacactcctcagattaggtgtgtcccggtgccggacacgtgtcgtatccgacaccgacatatataattacaccgaattatgtgatttt 18426969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 172 - 222
Target Start/End: Complemental strand, 8842398 - 8842348
Alignment:
Q  172 gtgtcgtgtctgacactgacacatataattacactgaattatgtgattttc 222  Q
    |||||||||||||||| |||| ||||||||||||  |||||||||||||||    
T  8842398 gtgtcgtgtctgacaccgacatatataattacaccaaattatgtgattttc 8842348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 177 - 223
Target Start/End: Complemental strand, 20691383 - 20691337
Alignment:
Q  177 gtgtctgacactgacacatataattacactgaattatgtgattttct 223  Q
    ||||||||||| ||||||||| ||||||||||||||||| |||||||    
T  20691383 gtgtctgacaccgacacatatgattacactgaattatgtcattttct 20691337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 161 - 223
Target Start/End: Complemental strand, 45451633 - 45451571
Alignment:
Q  161 gtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgattttct 223  Q
    ||||| |||| |||||||||| ||||| ||||||||| |||| |||||| |||||||||||||    
T  45451633 gtgtcggacatgtgtcgtgtccgacaccgacacatattattatactgaagtatgtgattttct 45451571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 6780404 - 6780460
Alignment:
Q  167 gacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgattttct 223  Q
    ||||||||| ||||| |||||  |||||||||||||||||||| || ||||||||||    
T  6780404 gacacgtgttgtgtccgacaccaacacatataattacactgaactacgtgattttct 6780460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 221
Target Start/End: Original strand, 10268481 - 10268525
Alignment:
Q  177 gtgtctgacactgacacatataattacactgaattatgtgatttt 221  Q
    ||||||||||||||||| | |||||||||| ||||||||||||||    
T  10268481 gtgtctgacactgacacttgtaattacactaaattatgtgatttt 10268525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 183 - 223
Target Start/End: Original strand, 11313801 - 11313841
Alignment:
Q  183 gacactgacacatataattacactgaattatgtgattttct 223  Q
    |||||| ||||||||||||||||| ||||||||||||||||    
T  11313801 gacactaacacatataattacactaaattatgtgattttct 11313841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 221
Target Start/End: Complemental strand, 20389694 - 20389636
Alignment:
Q  161 gtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 221  Q
    ||||||||||||||| ||||| ||||| ||| |||||| ||||||||||||||||||||||    
T  20389694 gtgtcagacacgtgt-gtgtccgacaccgacgcatata-ttacactgaattatgtgatttt 20389636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 223
Target Start/End: Original strand, 24204983 - 24205082
Alignment:
Q  124 atgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtc-gtgtctgacactgacacatataattacactgaattatgtgattttc 222  Q
    |||||||||| ||||| |||| || ||| |||| || ||||| |||||| ||| ||||| ||||| ||||| ||||||||||||| ||||||| ||||||    
T  24204983 atgaagcacggacactcctcgaattaggcgtgtcctggtgtcggacacgcgtcagtgtccgacac-gacacttataattacactgtattatgtcattttc 24205081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 221
Target Start/End: Original strand, 24633380 - 24633440
Alignment:
Q  161 gtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 221  Q
    |||| ||||| ||||||||||  |||| |||||||||||||||| ||||||| ||||||||    
T  24633380 gtgttagacaagtgtcgtgtccaacaccgacacatataattacattgaattacgtgatttt 24633440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 221
Target Start/End: Complemental strand, 28918120 - 28918021
Alignment:
Q  124 atgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtct--gacactgacacatataattacactgaattatgtgatttt 221  Q
    |||||||| | ||||| || |||| ||| |||| |  ||||| |||||||||||||||   ||||| ||||| | |||||||||||||||||||||||||    
T  28918120 atgaagcagggacactccttggattaggcgtgtcccagtgtcggacacgtgtcgtgtccacgacaccgacacttgtaattacactgaattatgtgatttt 28918021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 176 - 223
Target Start/End: Complemental strand, 8383322 - 8383275
Alignment:
Q  176 cgtgtctgacactgacacatataattacactgaattatgtgattttct 223  Q
    |||||| ||||| ||||| ||||||||||||||||||| |||||||||    
T  8383322 cgtgtccgacaccgacacttataattacactgaattatatgattttct 8383275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 122 - 181
Target Start/End: Original strand, 41961579 - 41961638
Alignment:
Q  122 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtc 181  Q
    |||||||||||| ||||||||||||| ||| |||| |  ||||| |||||||||||||||    
T  41961579 ctatgaagcacggacacttctcggattaggcgtgtcccagtgtcggacacgtgtcgtgtc 41961638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 217
Target Start/End: Complemental strand, 3865748 - 3865698
Alignment:
Q  167 gacacgtgtcgtgtctgacactgacacatataattacactgaattatgtga 217  Q
    ||||||||||||||| ||||| ||||| | |||||| ||||||||||||||    
T  3865748 gacacgtgtcgtgtcagacaccgacacttgtaattatactgaattatgtga 3865698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 223
Target Start/End: Original strand, 10690269 - 10690303
Alignment:
Q  189 gacacatataattacactgaattatgtgattttct 223  Q
    |||| ||||||||||||||||||||||||||||||    
T  10690269 gacaaatataattacactgaattatgtgattttct 10690303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 223
Target Start/End: Original strand, 11493372 - 11493402
Alignment:
Q  193 catataattacactgaattatgtgattttct 223  Q
    |||||||||||||||||||||||||||||||    
T  11493372 catataattacactgaattatgtgattttct 11493402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 192 - 222
Target Start/End: Original strand, 11507485 - 11507515
Alignment:
Q  192 acatataattacactgaattatgtgattttc 222  Q
    |||||||||||||||||||||||||||||||    
T  11507485 acatataattacactgaattatgtgattttc 11507515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 223
Target Start/End: Complemental strand, 13414533 - 13414487
Alignment:
Q  177 gtgtctgacactgacacatataattacactgaattatgtgattttct 223  Q
    ||||| ||||| |||||||||||||||| |||||||| |||||||||    
T  13414533 gtgtccgacaccgacacatataattacattgaattatttgattttct 13414487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 221
Target Start/End: Complemental strand, 14209171 - 14209133
Alignment:
Q  183 gacactgacacatataattacactgaattatgtgatttt 221  Q
    ||||||||||| | |||||||||||||||||||||||||    
T  14209171 gacactgacacttgtaattacactgaattatgtgatttt 14209133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 193
Target Start/End: Complemental strand, 14217021 - 14216951
Alignment:
Q  123 tatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacac 193  Q
    ||||||||||| ||||||||||||| ||| |||| |  |||||  |||||||||||||| |||||| ||||    
T  14217021 tatgaagcacggacacttctcggattaggtgtgtcccagtgtcgtacacgtgtcgtgtccgacactaacac 14216951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 193
Target Start/End: Complemental strand, 14223150 - 14223080
Alignment:
Q  123 tatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacac 193  Q
    ||||||||||| ||||||||||||| ||| |||| |  |||||  |||||||||||||| |||||| ||||    
T  14223150 tatgaagcacggacacttctcggattaggtgtgtcccagtgtcgtacacgtgtcgtgtccgacactaacac 14223080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 187
Target Start/End: Original strand, 17005547 - 17005613
Alignment:
Q  121 actatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacac 187  Q
    |||||||||||| |||||| ||||||| ||  |||| || |||||||||||||||  ||||||||||    
T  17005547 actatgaagcacaaacactcctcggattagaggtgtcctggtgtcagacacgtgttatgtctgacac 17005613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 187
Target Start/End: Complemental strand, 25065038 - 25064972
Alignment:
Q  121 actatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacac 187  Q
    |||||| |||||||||||| |||||||||   |||| |  ||||||||||||||||||||| |||||    
T  25065038 actatggagcacgaacactcctcggataaaccgtgtcccggtgtcagacacgtgtcgtgtccgacac 25064972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 213
Target Start/End: Complemental strand, 26917328 - 26917298
Alignment:
Q  183 gacactgacacatataattacactgaattat 213  Q
    |||||||||||||||||||||||||||||||    
T  26917328 gacactgacacatataattacactgaattat 26917298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 223
Target Start/End: Original strand, 32804547 - 32804581
Alignment:
Q  189 gacacatataattacactgaattatgtgattttct 223  Q
    |||||||||||||||||| ||||||||||||||||    
T  32804547 gacacatataattacactaaattatgtgattttct 32804581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 221
Target Start/End: Complemental strand, 38731276 - 38731238
Alignment:
Q  183 gacactgacacatataattacactgaattatgtgatttt 221  Q
    ||||| ||||||||||| |||||||||||||||||||||    
T  38731276 gacaccgacacatataactacactgaattatgtgatttt 38731238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 221
Target Start/End: Complemental strand, 39002090 - 39002052
Alignment:
Q  183 gacactgacacatataattacactgaattatgtgatttt 221  Q
    |||||||||| ||||||||||| ||||||||||||||||    
T  39002090 gacactgacatatataattacattgaattatgtgatttt 39002052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 223
Target Start/End: Original strand, 48202264 - 48202310
Alignment:
Q  177 gtgtctgacactgacacatataattacactgaattatgtgattttct 223  Q
    |||| |||||| |||||||||||||||| | ||||||||||||||||    
T  48202264 gtgtttgacacagacacatataattacattaaattatgtgattttct 48202310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 223
Target Start/End: Complemental strand, 2731863 - 2731830
Alignment:
Q  190 acacatataattacactgaattatgtgattttct 223  Q
    ||||||||||||||||| ||||||||||||||||    
T  2731863 acacatataattacacttaattatgtgattttct 2731830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 162 - 223
Target Start/End: Original strand, 7614396 - 7614456
Alignment:
Q  162 tgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgattttct 223  Q
    |||||||| |||| |||||  ||||| |||| ||||||||| ||||||||||||||||||||    
T  7614396 tgtcagac-cgtgccgtgttcgacaccgacatatataattatactgaattatgtgattttct 7614456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 223
Target Start/End: Original strand, 16192758 - 16192791
Alignment:
Q  190 acacatataattacactgaattatgtgattttct 223  Q
    |||||||||||||||||||||||||| |||||||    
T  16192758 acacatataattacactgaattatgttattttct 16192791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 221
Target Start/End: Complemental strand, 7171581 - 7171521
Alignment:
Q  161 gtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 221  Q
    ||||| ||||||||||||||| |||||  |||| | ||||||||| ||||||| |||||||    
T  7171581 gtgtcggacacgtgtcgtgtccgacaccaacacttgtaattacaccgaattatatgatttt 7171521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 223
Target Start/End: Original strand, 8039836 - 8039876
Alignment:
Q  183 gacactgacacatataattacactgaattatgtgattttct 223  Q
    ||||| ||||||||||||||||||||||||| | |||||||    
T  8039836 gacaccgacacatataattacactgaattatataattttct 8039876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 223
Target Start/End: Complemental strand, 14028065 - 14028025
Alignment:
Q  183 gacactgacacatataattacactgaattatgtgattttct 223  Q
    ||||| ||||||||||||||||||| ||| |||||||||||    
T  14028065 gacaccgacacatataattacactgcattttgtgattttct 14028025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 223
Target Start/End: Original strand, 14840304 - 14840332
Alignment:
Q  195 tataattacactgaattatgtgattttct 223  Q
    |||||||||||||||||||||||||||||    
T  14840304 tataattacactgaattatgtgattttct 14840332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 189
Target Start/End: Original strand, 16192701 - 16192729
Alignment:
Q  161 gtgtcagacacgtgtcgtgtctgacactg 189  Q
    |||||||||||||||||||||||||||||    
T  16192701 gtgtcagacacgtgtcgtgtctgacactg 16192729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 223
Target Start/End: Complemental strand, 26290429 - 26290389
Alignment:
Q  183 gacactgacacatataattacactgaattatgtgattttct 223  Q
    |||||||||||||||||||| || ||| |||||||||||||    
T  26290429 gacactgacacatataattaaaccgaactatgtgattttct 26290389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 221
Target Start/End: Original strand, 26492184 - 26492244
Alignment:
Q  161 gtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 221  Q
    |||||||||| |||||||||| ||||| || || | ||||||||||||||| | |||||||    
T  26492184 gtgtcagacatgtgtcgtgtccgacaccgatacttgtaattacactgaattgtatgatttt 26492244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 189 - 221
Target Start/End: Complemental strand, 29508496 - 29508464
Alignment:
Q  189 gacacatataattacactgaattatgtgatttt 221  Q
    ||||||||||||||||||||||||| |||||||    
T  29508496 gacacatataattacactgaattatatgatttt 29508464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 58; Significance: 2e-24; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 122 - 223
Target Start/End: Complemental strand, 35161155 - 35161054
Alignment:
Q  122 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 221  Q
    |||||||||||| |||||| |||||| ||| ||||||  ||||| ||||||||||||||| ||| |||| || |||||||||||||||||||||||||||    
T  35161155 ctatgaagcacggacacttttcggattaggtgtgttccggtgtcggacacgtgtcgtgtccgactctgatacttataattacactgaattatgtgatttt 35161056  T
Q  222 ct 223  Q
    ||    
T  35161055 ct 35161054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 120 - 221
Target Start/End: Original strand, 23292924 - 23293025
Alignment:
Q  120 cactatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatt 219  Q
    |||||||||||||| ||||| ||||||| ||| |||| |  ||||| ||||||||||||||| ||||| ||||| | |||||| ||||||||||||||||    
T  23292924 cactatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattatactgaattatgtgatt 23293023  T
Q  220 tt 221  Q
    ||    
T  23293024 tt 23293025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 121 - 221
Target Start/End: Original strand, 35157924 - 35158024
Alignment:
Q  121 actatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgattt 220  Q
    ||||||||||||| ||||||||||||| | | ||||||  ||||  |||| |||||||||| ||||| ||||| |||||||||||| |||||||||||||    
T  35157924 actatgaagcacggacacttctcggattaagcgtgttccggtgttggacatgtgtcgtgtcagacaccgacacttataattacactaaattatgtgattt 35158023  T
Q  221 t 221  Q
    |    
T  35158024 t 35158024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 161 - 223
Target Start/End: Original strand, 8402721 - 8402783
Alignment:
Q  161 gtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgattttct 223  Q
    ||||| |||| ||||||||||||||||||| |||||||||||||||||||||| |||||||||    
T  8402721 gtgtcggacaagtgtcgtgtctgacactgagacatataattacactgaattatatgattttct 8402783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 121 - 221
Target Start/End: Original strand, 40179575 - 40179675
Alignment:
Q  121 actatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgattt 220  Q
    ||||| ||||||||| | ||||||||| ||| ||||  | |||||  ||| |||||||||| ||||| ||| ||||||||||||||||||||||||||||    
T  40179575 actatcaagcacgaataattctcggattaggcgtgtcatggtgtcgaacatgtgtcgtgtccgacaccgacgcatataattacactgaattatgtgattt 40179674  T
Q  221 t 221  Q
    |    
T  40179675 t 40179675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 120 - 223
Target Start/End: Original strand, 8423656 - 8423759
Alignment:
Q  120 cactatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatt 219  Q
    |||||||| ||||| ||||||||| ||| ||| |||| |  ||||| ||||  ||||||||| ||||| ||||  |||||||||||||||||||||||||    
T  8423656 cactatgacgcacggacacttctccgattaggcgtgtcccggtgtcggacagctgtcgtgtccgacaccgacatttataattacactgaattatgtgatt 8423755  T
Q  220 ttct 223  Q
    ||||    
T  8423756 ttct 8423759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 122 - 221
Target Start/End: Complemental strand, 49431145 - 49431046
Alignment:
Q  122 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 221  Q
    |||| ||||| | ||||| ||||||||||| |||| |  ||||  ||||||||||||||| ||||| ||||| | |||||||||||||||||||||||||    
T  49431145 ctataaagcatggacactcctcggataaggcgtgtcccggtgttggacacgtgtcgtgtccgacaccgacacttttaattacactgaattatgtgatttt 49431046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 54580008 - 54580062
Alignment:
Q  167 gacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 221  Q
    ||||||||||||||| ||||| ||||| |||||||||||||||||||||||||||    
T  54580008 gacacgtgtcgtgtccgacaccgacacttataattacactgaattatgtgatttt 54580062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 121 - 193
Target Start/End: Original strand, 5414100 - 5414172
Alignment:
Q  121 actatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacac 193  Q
    ||||||||||||| ||||| || |||||||| |||| |  ||||||||||||||||||||| |||||||||||    
T  5414100 actatgaagcacggacactccttggataaggtgtgtccctgtgtcagacacgtgtcgtgtccgacactgacac 5414172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 121 - 221
Target Start/End: Original strand, 28964187 - 28964287
Alignment:
Q  121 actatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgattt 220  Q
    ||||||||||| | ||||| ||||||| ||| |||| |  ||||| || | |||||||||| ||||| ||||| | ||||||||||||||||||||||||    
T  28964187 actatgaagcatggacactcctcggattaggcgtgtcccagtgtcggatatgtgtcgtgtccgacacagacacttgtaattacactgaattatgtgattt 28964286  T
Q  221 t 221  Q
    |    
T  28964287 t 28964287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 122 - 223
Target Start/End: Complemental strand, 36635449 - 36635342
Alignment:
Q  122 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacac------atataattacactgaattatgt 215  Q
    |||||||||||| |||||  |||||| ||| |||| |  ||||| ||| |||||||||||||||||| ||||      ||||||||||||||||||||||    
T  36635449 ctatgaagcacggacactcttcggattaggcgtgtcccggtgtctgacgcgtgtcgtgtctgacactcacacgaacacatataattacactgaattatgt 36635350  T
Q  216 gattttct 223  Q
    ||||||||    
T  36635349 gattttct 36635342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 123 - 221
Target Start/End: Original strand, 3947702 - 3947805
Alignment:
Q  123 tatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtc-----tgacactgacacatataattacactgaattatgtga 217  Q
    ||||||||||| ||||| ||||||| ||| |||| || ||||| |||||||||||||||      ||||||||||| | |||||||||||||||||| ||    
T  3947702 tatgaagcacggacactcctcggattaggtgtgtcctggtgtcggacacgtgtcgtgtccgacacgacactgacacttgtaattacactgaattatgcga 3947801  T
Q  218 tttt 221  Q
    ||||    
T  3947802 tttt 3947805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 140 - 223
Target Start/End: Complemental strand, 9996941 - 9996858
Alignment:
Q  140 tctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgattttct 223  Q
    |||| ||| ||| ||||||  ||||| |||||||||  |||||||||| || ||||||||||| ||||||||||||||||||||    
T  9996941 tctccgattaggtgtgttccagtgtcggacacgtgttatgtctgacaccgagacatataattatactgaattatgtgattttct 9996858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 172 - 223
Target Start/End: Original strand, 10499260 - 10499311
Alignment:
Q  172 gtgtcgtgtctgacactgacacatataattacactgaattatgtgattttct 223  Q
    |||||| ||| |||||||||||||||||||||||| ||||||||||||||||    
T  10499260 gtgtcgggtccgacactgacacatataattacactaaattatgtgattttct 10499311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 122 - 221
Target Start/End: Original strand, 12895214 - 12895313
Alignment:
Q  122 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 221  Q
    |||||||||||||||||| ||||||| ||| |||| |   |||| || || ||||||||| ||||| ||||| |||||||||||  ||||||||||||||    
T  12895214 ctatgaagcacgaacactcctcggattaggcgtgtcccgatgtcggatacatgtcgtgtccgacaccgacacttataattacacaaaattatgtgatttt 12895313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 122 - 193
Target Start/End: Original strand, 22234819 - 22234890
Alignment:
Q  122 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacac 193  Q
    |||||||||||||||||||||||||| ||  |||| || ||||| ||||||||||||||| ||||| |||||    
T  22234819 ctatgaagcacgaacacttctcggattagctgtgtcctggtgtcggacacgtgtcgtgtcagacaccgacac 22234890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 122 - 221
Target Start/End: Original strand, 36509032 - 36509131
Alignment:
Q  122 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 221  Q
    |||||||||| ||| ||||||||||| |   |||| || || |||||||||||||| ||| ||| | ||||||||||||||||||  |||||||||||||    
T  36509032 ctatgaagcatgaatacttctcggattaaacgtgtcctggtatcagacacgtgtcgcgtccgacgccgacacatataattacacttgattatgtgatttt 36509131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 161 - 221
Target Start/End: Original strand, 12797317 - 12797377
Alignment:
Q  161 gtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 221  Q
    |||||||||| || ||||||| ||||| ||||| | |||||||||||||||||||||||||    
T  12797317 gtgtcagacatgtatcgtgtccgacaccgacacttgtaattacactgaattatgtgatttt 12797377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 147 - 223
Target Start/End: Original strand, 19097859 - 19097935
Alignment:
Q  147 taaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgattttct 223  Q
    ||||| |||| | ||||||||||||||||| |||  ||||| |||| ||||||||| ||||||||| ||||||||||    
T  19097859 taaggcgtgtccccgtgtcagacacgtgtcatgttcgacaccgacaaatataattatactgaattacgtgattttct 19097935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 123 - 211
Target Start/End: Complemental strand, 12324038 - 12323944
Alignment:
Q  123 tatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgt------ctgacactgacacatataattacactgaatt 211  Q
    ||||||||||| ||||| ||||||||||| |||||| |||| || ||||||||| |||      | |||||||||| ||||||||||||||||||    
T  12324038 tatgaagcacggacactcctcggataaggtgtgttcccgtgccacacacgtgtcatgtccgacaccgacactgacatatataattacactgaatt 12323944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 122 - 221
Target Start/End: Complemental strand, 16073513 - 16073414
Alignment:
Q  122 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 221  Q
    |||||||||| | ||||| ||||||| ||| ||||  | ||||| |||| || ||||||| ||||| ||||| | |||||||||||||||||| ||||||    
T  16073513 ctatgaagcatggacactcctcggattaggcgtgtcttagtgtcggacatgtatcgtgtccgacaccgacacttgtaattacactgaattatgcgatttt 16073414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 154 - 221
Target Start/End: Original strand, 38846984 - 38847051
Alignment:
Q  154 tgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 221  Q
    |||||| ||||| |||||||||||| || ||||||||||| | |||||||||||||| || |||||||    
T  38846984 tgttctggtgtcggacacgtgtcgtatccgacactgacacttgtaattacactgaataatatgatttt 38847051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 122 - 192
Target Start/End: Original strand, 24613630 - 24613700
Alignment:
Q  122 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgaca 192  Q
    |||||||||||| ||||| || |||| ||  |||| || ||||||||||||||||||||||||||| ||||    
T  24613630 ctatgaagcacggacactcctaggattagacgtgtcctggtgtcagacacgtgtcgtgtctgacaccgaca 24613700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 121 - 223
Target Start/End: Original strand, 30103296 - 30103397
Alignment:
Q  121 actatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgattt 220  Q
    |||||||||||   ||||| ||||||| ||  |||| ||  |||||||||  |||||||| |||||| ||||||||| |||||||| |||||||||||||    
T  30103296 actatgaagcagagacactcctcggattagatgtgtcctgatgtcagacatatgtcgtgtttgacaccgacacatatgattacact-aattatgtgattt 30103394  T
Q  221 tct 223  Q
    |||    
T  30103395 tct 30103397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 189 - 223
Target Start/End: Complemental strand, 40613502 - 40613468
Alignment:
Q  189 gacacatataattacactgaattatgtgattttct 223  Q
    |||||||||||||||||||||||||||||||||||    
T  40613502 gacacatataattacactgaattatgtgattttct 40613468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 223
Target Start/End: Complemental strand, 903977 - 903940
Alignment:
Q  186 actgacacatataattacactgaattatgtgattttct 223  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  903977 actgatacatataattacactgaattatgtgattttct 903940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 223
Target Start/End: Original strand, 5775358 - 5775399
Alignment:
Q  182 tgacactgacacatataattacactgaattatgtgattttct 223  Q
    |||||| |||||||||||||||||| ||||||||||||||||    
T  5775358 tgacaccgacacatataattacacttaattatgtgattttct 5775399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 221
Target Start/End: Original strand, 2361954 - 2362014
Alignment:
Q  161 gtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 221  Q
    |||||||||||| |||||||| ||||| ||||| | |||||||||| |||||||| |||||    
T  2361954 gtgtcagacacgagtcgtgtccgacaccgacacttttaattacactaaattatgtaatttt 2362014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 175 - 211
Target Start/End: Original strand, 20950420 - 20950456
Alignment:
Q  175 tcgtgtctgacactgacacatataattacactgaatt 211  Q
    ||||||||||||| |||||||||||||||||||||||    
T  20950420 tcgtgtctgacaccgacacatataattacactgaatt 20950456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 191 - 223
Target Start/End: Original strand, 22440609 - 22440641
Alignment:
Q  191 cacatataattacactgaattatgtgattttct 223  Q
    |||||||||||||||||||||||||||||||||    
T  22440609 cacatataattacactgaattatgtgattttct 22440641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 221
Target Start/End: Complemental strand, 29205524 - 29205464
Alignment:
Q  161 gtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 221  Q
    ||||| |||| ||||||||||  |||| ||||| | |||||||||||||||||||||||||    
T  29205524 gtgtcggacatgtgtcgtgtccaacaccgacacttgtaattacactgaattatgtgatttt 29205464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 221
Target Start/End: Original strand, 34306744 - 34306843
Alignment:
Q  122 ctatgaagcacgaacacttctcggataaggagtgttctcg-tgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgattt 220  Q
    |||||||||||||||| | ||| ||| ||| |||| |||| |||| ||||||||||||||| ||||| ||||| | ||||||||||  ||||| ||||||    
T  34306744 ctatgaagcacgaacattcctcagattaggcgtgt-ctcggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactacattatctgattt 34306842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 122 - 181
Target Start/End: Complemental strand, 19482798 - 19482739
Alignment:
Q  122 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtc 181  Q
    |||||||||||||||||| ||||||| ||| |||| |  ||||| |||||||||||||||    
T  19482798 ctatgaagcacgaacactcctcggattaggtgtgtcccagtgtcggacacgtgtcgtgtc 19482739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 223
Target Start/End: Complemental strand, 13134502 - 13134468
Alignment:
Q  189 gacacatataattacactgaattatgtgattttct 223  Q
    |||||||||||||||||| ||||||||||||||||    
T  13134502 gacacatataattacactaaattatgtgattttct 13134468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 223
Target Start/End: Complemental strand, 16189761 - 16189727
Alignment:
Q  189 gacacatataattacactgaattatgtgattttct 223  Q
    |||||| ||||||||||||||||||||||||||||    
T  16189761 gacacacataattacactgaattatgtgattttct 16189727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 221
Target Start/End: Complemental strand, 21945609 - 21945523
Alignment:
Q  135 acacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 221  Q
    ||||| ||||||| ||| |||||   ||||| |||| ||||| |||| ||||| ||||| | ||||||||||||||||||| |||||    
T  21945609 acactcctcggattaggcgtgttgcggtgtcggacatgtgtcatgtccgacaccgacacttgtaattacactgaattatgtcatttt 21945523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 221
Target Start/End: Original strand, 23861369 - 23861470
Alignment:
Q  122 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatat--aattacactgaattatgtgatt 219  Q
    ||||||||||||||||||  | | || ||| ||||  | ||| |||||| ||||||| |||||||| |||||||||  ||||||| ||||| ||||||||    
T  23861369 ctatgaagcacgaacactctttgaattaggcgtgtcttggtgacagacatgtgtcgtatctgacaccgacacatatataattacattgaatcatgtgatt 23861468  T
Q  220 tt 221  Q
    ||    
T  23861469 tt 23861470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 223
Target Start/End: Complemental strand, 33950200 - 33950154
Alignment:
Q  177 gtgtctgacactgacacatataattacactgaattatgtgattttct 223  Q
    ||||||||||| ||||||||| |||||| | ||||||||||||||||    
T  33950200 gtgtctgacaccgacacatatgattacattaaattatgtgattttct 33950154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 193
Target Start/End: Original strand, 46083917 - 46083991
Alignment:
Q  119 acactatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacac 193  Q
    ||||||||||||| | ||||| |||  |||||| |||| | || ||||||||||||||||||| || ||||||||    
T  46083917 acactatgaagcatggacactcctcttataaggcgtgtccccgcgtcagacacgtgtcgtgtccgatactgacac 46083991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 223
Target Start/End: Original strand, 18576045 - 18576078
Alignment:
Q  190 acacatataattacactgaattatgtgattttct 223  Q
    |||||||||||||||| |||||||||||||||||    
T  18576045 acacatataattacaccgaattatgtgattttct 18576078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 183 - 216
Target Start/End: Original strand, 35723385 - 35723418
Alignment:
Q  183 gacactgacacatataattacactgaattatgtg 216  Q
    |||||||||||||||||||||| |||||||||||    
T  35723385 gacactgacacatataattacattgaattatgtg 35723418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 176 - 221
Target Start/End: Complemental strand, 42640594 - 42640549
Alignment:
Q  176 cgtgtctgacactgacacatataattacactgaattatgtgatttt 221  Q
    |||||| ||||| ||||| | |||||||||||||||||||||||||    
T  42640594 cgtgtccgacaccgacacttgtaattacactgaattatgtgatttt 42640549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 221
Target Start/End: Complemental strand, 4157229 - 4157169
Alignment:
Q  161 gtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 221  Q
    ||||| |||| |||||||||| ||||| ||||| | ||||| |||| ||||||||||||||    
T  4157229 gtgtcggacatgtgtcgtgtccgacaccgacacttgtaattgcactaaattatgtgatttt 4157169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 221
Target Start/End: Complemental strand, 4157516 - 4157456
Alignment:
Q  161 gtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 221  Q
    ||||| |||| |||||||||| ||||| ||||| | ||||| |||| ||||||||||||||    
T  4157516 gtgtcggacatgtgtcgtgtccgacaccgacacttgtaattgcactaaattatgtgatttt 4157456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 223
Target Start/End: Complemental strand, 6933333 - 6933293
Alignment:
Q  183 gacactgacacatataattacactgaattatgtgattttct 223  Q
    ||||||||||||||| |||| ||||||||||| ||||||||    
T  6933333 gacactgacacatatgattaaactgaattatgagattttct 6933293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 218
Target Start/End: Complemental strand, 15029816 - 15029788
Alignment:
Q  190 acacatataattacactgaattatgtgat 218  Q
    |||||||||||||||||||||||||||||    
T  15029816 acacatataattacactgaattatgtgat 15029788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 189 - 221
Target Start/End: Original strand, 22234897 - 22234929
Alignment:
Q  189 gacacatataattacactgaattatgtgatttt 221  Q
    |||||||| ||||||||||||||||||||||||    
T  22234897 gacacatagaattacactgaattatgtgatttt 22234929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 223
Target Start/End: Original strand, 30982879 - 30982919
Alignment:
Q  183 gacactgacacatataattacactgaattatgtgattttct 223  Q
    ||||| ||||| ||||||||||||||| |||||||||||||    
T  30982879 gacaccgacacttataattacactgaaatatgtgattttct 30982919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 223
Target Start/End: Original strand, 44132645 - 44132685
Alignment:
Q  183 gacactgacacatataattacactgaattatgtgattttct 223  Q
    ||||| |||||||||||||| ||||||||| ||||||||||    
T  44132645 gacaccgacacatataattatactgaattacgtgattttct 44132685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 223
Target Start/End: Complemental strand, 46160954 - 46160914
Alignment:
Q  183 gacactgacacatataattacactgaattatgtgattttct 223  Q
    ||||| |||||||||||| |||||||||||||| |||||||    
T  46160954 gacaccgacacatataataacactgaattatgttattttct 46160914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 57; Significance: 7e-24; HSPs: 63)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 123 - 219
Target Start/End: Complemental strand, 12919063 - 12918967
Alignment:
Q  123 tatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatt 219  Q
    ||||||||||||||||||||||||||||  |||| | |||||||||||||||||||||| || ||  ||||||||||| ||| ||||||||||||||    
T  12919063 tatgaagcacgaacacttctcggataagccgtgtccccgtgtcagacacgtgtcgtgtccgataccaacacatataatcacattgaattatgtgatt 12918967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 124 - 222
Target Start/End: Original strand, 29163323 - 29163421
Alignment:
Q  124 atgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgattttc 222  Q
    |||||||||||||||||||| ||| ||  |||| |  ||||||| ||||||||||||| ||||| |||||||||||||| | |||||||||||||||||    
T  29163323 atgaagcacgaacacttctctgattagccgtgtcccggtgtcaggcacgtgtcgtgtccgacaccgacacatataattaaattgaattatgtgattttc 29163421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 123 - 221
Target Start/End: Original strand, 40258874 - 40258972
Alignment:
Q  123 tatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 221  Q
    ||||||||| | ||||| ||||||| ||| |||| || ||||| |||| |||||||||||||||| ||||| | |||||||||||||||||||||||||    
T  40258874 tatgaagcatggacactcctcggattaggcgtgtcctggtgtcggacaggtgtcgtgtctgacaccgacacttgtaattacactgaattatgtgatttt 40258972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 122 - 223
Target Start/End: Complemental strand, 30749959 - 30749858
Alignment:
Q  122 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 221  Q
    |||||||||| | ||||| |||| |||| | || | ||||||||| |||| ||| ||||| ||||| |||||||||||||||||||||||||||||||||    
T  30749959 ctatgaagcatggacactcctcgaataatgcgtatcctcgtgtcaaacacatgtggtgtccgacaccgacacatataattacactgaattatgtgatttt 30749860  T
Q  222 ct 223  Q
    ||    
T  30749859 ct 30749858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 122 - 223
Target Start/End: Complemental strand, 30771410 - 30771309
Alignment:
Q  122 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 221  Q
    |||||||||| | ||||| |||| |||| | || | ||||||||| |||| ||| ||||| ||||| |||||||||||||||||||||||||||||||||    
T  30771410 ctatgaagcatggacactcctcgaataatgcgtatcctcgtgtcaaacacatgtggtgtccgacaccgacacatataattacactgaattatgtgatttt 30771311  T
Q  222 ct 223  Q
    ||    
T  30771310 ct 30771309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 123 - 223
Target Start/End: Original strand, 10577676 - 10577776
Alignment:
Q  123 tatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgattttc 222  Q
    ||||||||||| ||||| || |||||||| |||| | ||||||||||||| |||||||| | | | ||||||||||||||||||| ||| ||||||||||    
T  10577676 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgcgtcgtgtccgcccccgacacatataattacactgcattttgtgattttc 10577775  T
Q  223 t 223  Q
    |    
T  10577776 t 10577776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 122 - 221
Target Start/End: Original strand, 5898206 - 5898305
Alignment:
Q  122 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 221  Q
    |||| ||||||| ||||| ||||||| ||  |||| |  ||||  ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||    
T  5898206 ctataaagcacggacactcctcggattagacgtgtcccggtgttggacacgtgtcgtgtctgacaccgacgcatataattacactgaattatgtgatttt 5898305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 122 - 221
Target Start/End: Complemental strand, 18337448 - 18337349
Alignment:
Q  122 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 221  Q
    |||||||||||| ||||| ||||||| |||  ||| |  ||||| ||||||||| ||||| ||||| ||||| | |||||||||||||||||||||||||    
T  18337448 ctatgaagcacggacactcctcggatcaggcatgtcccagtgtcggacacgtgttgtgtccgacaccgacacttgtaattacactgaattatgtgatttt 18337349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 122 - 221
Target Start/End: Complemental strand, 37598950 - 37598852
Alignment:
Q  122 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 221  Q
    |||||||||||| ||||| ||||||| ||| |||| |   |||| ||||||||||||||| ||||| ||||| ||||||||||||||||| |||||||||    
T  37598950 ctatgaagcacggacactcctcggattaggcgtgtcccattgtcggacacgtgtcgtgtccgacaccgacacttataattacactgaatt-tgtgatttt 37598852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 122 - 223
Target Start/End: Original strand, 7918154 - 7918252
Alignment:
Q  122 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtct-gacactgacacatataattacactgaattatgtgattt 220  Q
    |||||||||||| ||||| ||||||| ||| |||| || |||||||| ||||    || |  ||||||||||||||||||||||||||||||||||||||    
T  7918154 ctatgaagcacggacactcctcggattaggtgtgtcctggtgtcagaaacgt----tgacacgacactgacacatataattacactgaattatgtgattt 7918249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 183 - 223
Target Start/End: Complemental strand, 25361944 - 25361904
Alignment:
Q  183 gacactgacacatataattacactgaattatgtgattttct 223  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  25361944 gacactgacacatataattacactgaattatgtgattttct 25361904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 159 - 223
Target Start/End: Complemental strand, 36878543 - 36878479
Alignment:
Q  159 tcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgattttct 223  Q
    ||||||| |||| || ||||||| ||||| ||||| |||||||||||||||||||||||||||||    
T  36878543 tcgtgtcggacatgtttcgtgtcagacaccgacacctataattacactgaattatgtgattttct 36878479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 40181945 - 40181889
Alignment:
Q  167 gacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgattttct 223  Q
    ||||||||| ||||| ||||| || ||||||||||||||||||||||||||||||||    
T  40181945 gacacgtgttgtgtccgacaccgatacatataattacactgaattatgtgattttct 40181889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 122 - 221
Target Start/End: Complemental strand, 51410144 - 51410045
Alignment:
Q  122 ctatgaagcacgaacacttctcggataaggagtgttctcg-tgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgattt 220  Q
    |||||||||||||| ||| || |||| ||| |||| |||| |||| || |||||||||||| ||||| ||||| | ||||||||||||||||||||||||    
T  51410144 ctatgaagcacgaatactccttggattaggcgtgt-ctcggtgtcggatacgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtgattt 51410046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 122 - 221
Target Start/End: Original strand, 38078601 - 38078700
Alignment:
Q  122 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 221  Q
    |||||||||||||| ||| ||||||| ||| |||| || ||||   ||| |||||||||| ||||| ||||| | |||||||| ||||||||||||||||    
T  38078601 ctatgaagcacgaatactcctcggattaggcgtgtcctggtgttgaacatgtgtcgtgtccgacaccgacacttgtaattacattgaattatgtgatttt 38078700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 115 - 221
Target Start/End: Original strand, 18190041 - 18190147
Alignment:
Q  115 ttggacactatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatg 214  Q
    |||| ||||||||||| |  ||||| ||||||| ||| |||| |  ||||| ||||||||| ||||||||||  ||||| | ||||||||||||||||||    
T  18190041 ttggtcactatgaagcgcatacactcctcggattaggtgtgtcccggtgtcggacacgtgttgtgtctgacatcgacacttgtaattacactgaattatg 18190140  T
Q  215 tgatttt 221  Q
    | |||||    
T  18190141 taatttt 18190147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 122 - 223
Target Start/End: Original strand, 2896061 - 2896162
Alignment:
Q  122 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 221  Q
    ||||||| || | |||||||| |||| ||| |||| |  || || ||||| ||||||||||||||| |||| |||||  |||||||||||||||||||||    
T  2896061 ctatgaaacatggacacttcttggattaggtgtgtcccggtctcggacacatgtcgtgtctgacaccgacatatatagctacactgaattatgtgatttt 2896160  T
Q  222 ct 223  Q
    ||    
T  2896161 ct 2896162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 121 - 221
Target Start/End: Original strand, 22515826 - 22515926
Alignment:
Q  121 actatgaagcacgaacacttctcggataaggagtgttctcg-tgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatt 219  Q
    ||||||||||||| ||||| ||||||| ||| |||| |||| |||| || | |||||||||| ||||| ||||| | |||||||||| ||||||||||||    
T  22515826 actatgaagcacggacactcctcggattaggcgtgt-ctcggtgtcggatatgtgtcgtgtccgacaccgacacttgtaattacactaaattatgtgatt 22515924  T
Q  220 tt 221  Q
    ||    
T  22515925 tt 22515926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 121 - 221
Target Start/End: Original strand, 46348322 - 46348422
Alignment:
Q  121 actatgaagcacgaacacttctcggataaggagtgttctcg-tgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatt 219  Q
    ||||||||||||| ||||  ||||||| ||| |||| |||| |||| ||||||||||||||| ||||| ||||| | |||||||||| |||||| |||||    
T  46348322 actatgaagcacggacacacctcggatcaggcgtgt-ctcggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactaaattatatgatt 46348420  T
Q  220 tt 221  Q
    ||    
T  46348421 tt 46348422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 161 - 221
Target Start/End: Complemental strand, 1815337 - 1815277
Alignment:
Q  161 gtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 221  Q
    ||||| |||| |||||||||| ||||| ||||| | |||||||||||||||||||||||||    
T  1815337 gtgtcggacatgtgtcgtgtcggacaccgacacttgtaattacactgaattatgtgatttt 1815277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 122 - 194
Target Start/End: Original strand, 32461393 - 32461465
Alignment:
Q  122 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacaca 194  Q
    |||||||||||| |||||||| |||| ||| |||| |  ||||||||||||||||||||| ||||| ||||||    
T  32461393 ctatgaagcacggacacttcttggattaggcgtgtcccagtgtcagacacgtgtcgtgtccgacaccgacaca 32461465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 183 - 223
Target Start/End: Complemental strand, 34371771 - 34371731
Alignment:
Q  183 gacactgacacatataattacactgaattatgtgattttct 223  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  34371771 gacaccgacacatataattacactgaattatgtgattttct 34371731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 183 - 223
Target Start/End: Complemental strand, 44482288 - 44482248
Alignment:
Q  183 gacactgacacatataattacactgaattatgtgattttct 223  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  44482288 gacaccgacacatataattacactgaattatgtgattttct 44482248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 184 - 223
Target Start/End: Original strand, 1864882 - 1864921
Alignment:
Q  184 acactgacacatataattacactgaattatgtgattttct 223  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  1864882 acaccgacacatataattacactgaattatgtgattttct 1864921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 184 - 223
Target Start/End: Complemental strand, 10233310 - 10233271
Alignment:
Q  184 acactgacacatataattacactgaattatgtgattttct 223  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  10233310 acacagacacatataattacactgaattatgtgattttct 10233271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 171 - 222
Target Start/End: Original strand, 17705576 - 17705626
Alignment:
Q  171 cgtgtcgtgtctgacactgacacatataattacactgaattatgtgattttc 222  Q
    ||||||| ||| ||||| ||||||||||||||||||||||||||||||||||    
T  17705576 cgtgtcgcgtccgacac-gacacatataattacactgaattatgtgattttc 17705626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 122 - 193
Target Start/End: Complemental strand, 25934746 - 25934675
Alignment:
Q  122 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacac 193  Q
    |||||||||||| ||||| || |||||||| || | | |||||||||||||||||||||| ||||| |||||    
T  25934746 ctatgaagcacggacactccttggataaggcgtatccccgtgtcagacacgtgtcgtgtccgacaccgacac 25934675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 124 - 221
Target Start/End: Original strand, 1486646 - 1486748
Alignment:
Q  124 atgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacact-----gacacatataattacactgaattatgtgat 218  Q
    |||||||||  ||||| ||||||| ||| |||| |  ||||| ||||||||||||||| |||||      ||||| ||||||||||||||||||||||||    
T  1486646 atgaagcacagacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacacgacaccgacacttataattacactgaattatgtgat 1486745  T
Q  219 ttt 221  Q
    |||    
T  1486746 ttt 1486748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 177 - 223
Target Start/End: Complemental strand, 2784620 - 2784574
Alignment:
Q  177 gtgtctgacactgacacatataattacactgaattatgtgattttct 223  Q
    ||||||||||| |||||||||||||| ||| ||||||||||||||||    
T  2784620 gtgtctgacaccgacacatataattatactcaattatgtgattttct 2784574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 167 - 221
Target Start/End: Complemental strand, 13997957 - 13997903
Alignment:
Q  167 gacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 221  Q
    |||| ||||||| ||  |||| |||||||||||||||||||||||||||||||||    
T  13997957 gacatgtgtcgtctccaacaccgacacatataattacactgaattatgtgatttt 13997903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 177 - 223
Target Start/End: Original strand, 23636044 - 23636090
Alignment:
Q  177 gtgtctgacactgacacatataattacactgaattatgtgattttct 223  Q
    ||||||||||| |||||||| |||||||||||||||||| |||||||    
T  23636044 gtgtctgacaccgacacatacaattacactgaattatgtaattttct 23636090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 161 - 223
Target Start/End: Original strand, 43492473 - 43492535
Alignment:
Q  161 gtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgattttct 223  Q
    ||||| |||| |||| ||||||||||| |||||| |||||||||| |||||| ||||||||||    
T  43492473 gtgtcggacatgtgttgtgtctgacaccgacacacataattacaccgaattacgtgattttct 43492535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 174 - 223
Target Start/End: Original strand, 14332634 - 14332683
Alignment:
Q  174 gtcgtgtctgacactgacacatataattacactgaattatgtgattttct 223  Q
    |||||||| ||||| || ||||||||||||||| ||||||||||||||||    
T  14332634 gtcgtgtccgacaccgagacatataattacactaaattatgtgattttct 14332683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 223
Target Start/End: Original strand, 25098563 - 25098596
Alignment:
Q  190 acacatataattacactgaattatgtgattttct 223  Q
    ||||||||||||||||||||||||||||||||||    
T  25098563 acacatataattacactgaattatgtgattttct 25098596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 124 - 221
Target Start/End: Original strand, 42359391 - 42359488
Alignment:
Q  124 atgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 221  Q
    |||||||||| ||||| ||||||| ||| |||| |  ||||| |||||  ||| |||| ||||| ||||| | ||||||||||||||| |||||||||    
T  42359391 atgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacacgtcttgtccgacaccgacacttgtaattacactgaattttgtgatttt 42359488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 221
Target Start/End: Complemental strand, 52903314 - 52903269
Alignment:
Q  176 cgtgtctgacactgacacatataattacactgaattatgtgatttt 221  Q
    |||||| ||||| ||||||||||||||||||||||||| |||||||    
T  52903314 cgtgtccgacaccgacacatataattacactgaattatatgatttt 52903269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 220
Target Start/End: Complemental strand, 13436523 - 13436479
Alignment:
Q  176 cgtgtctgacactgacacatataattacactgaattatgtgattt 220  Q
    |||||| |||||  |||||||||||||||||||||||||||||||    
T  13436523 cgtgtccgacaccaacacatataattacactgaattatgtgattt 13436479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 191 - 223
Target Start/End: Complemental strand, 19324612 - 19324580
Alignment:
Q  191 cacatataattacactgaattatgtgattttct 223  Q
    |||||||||||||||||||||||||||||||||    
T  19324612 cacatataattacactgaattatgtgattttct 19324580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 183 - 223
Target Start/End: Original strand, 20157351 - 20157391
Alignment:
Q  183 gacactgacacatataattacactgaattatgtgattttct 223  Q
    ||||| ||||||||| |||||||||||||||||||||||||    
T  20157351 gacaccgacacatatgattacactgaattatgtgattttct 20157391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 28674874 - 28674818
Alignment:
Q  167 gacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgattttct 223  Q
    |||| ||||||||||||||||  ||| ||||||||| |||||||||||| |||||||    
T  28674874 gacaagtgtcgtgtctgacaccaacatatataattatactgaattatgtaattttct 28674818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 183 - 223
Target Start/End: Original strand, 34712384 - 34712424
Alignment:
Q  183 gacactgacacatataattacactgaattatgtgattttct 223  Q
    |||||||||||||||||||||||| |||||||| |||||||    
T  34712384 gacactgacacatataattacactaaattatgttattttct 34712424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 176 - 223
Target Start/End: Complemental strand, 9709885 - 9709838
Alignment:
Q  176 cgtgtctgacactgacacatataattacactgaattatgtgattttct 223  Q
    |||||| ||||| ||||||||||||||||  |||||||||||||||||    
T  9709885 cgtgtccgacaccgacacatataattacaacgaattatgtgattttct 9709838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 122 - 193
Target Start/End: Complemental strand, 9828174 - 9828103
Alignment:
Q  122 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacac 193  Q
    |||||||||||| ||||| ||||||| ||  |||| |  ||||| ||||||||||||||||||||| |||||    
T  9828174 ctatgaagcacggacactcctcggattagacgtgtcccggtgtcggacacgtgtcgtgtctgacacggacac 9828103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 221
Target Start/End: Complemental strand, 5944341 - 5944303
Alignment:
Q  183 gacactgacacatataattacactgaattatgtgatttt 221  Q
    ||||| ||||| |||||||||||||||||||||||||||    
T  5944341 gacaccgacacttataattacactgaattatgtgatttt 5944303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 221
Target Start/End: Complemental strand, 9828102 - 9828064
Alignment:
Q  183 gacactgacacatataattacactgaattatgtgatttt 221  Q
    ||||| |||||||| ||||||||||||||||||||||||    
T  9828102 gacaccgacacataaaattacactgaattatgtgatttt 9828064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 187
Target Start/End: Original strand, 18556384 - 18556450
Alignment:
Q  121 actatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacac 187  Q
    ||||||||||||| ||||||||||||| ||| |||| |  ||||| || |||||||| |||||||||    
T  18556384 actatgaagcacggacacttctcggattaggcgtgtcccagtgtcggatacgtgtcgggtctgacac 18556450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 211
Target Start/End: Original strand, 27965940 - 27966027
Alignment:
Q  122 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaatt 211  Q
    |||||||||| | ||||| ||||||| ||| |||| |  ||||||| |||| | |||||||||||| |  ||||||||||||||||||||    
T  27965940 ctatgaagcatggacactcctcggattaggcgtgtcccggtgtcaggcacgaggcgtgtctgacacgg--acatataattacactgaatt 27966027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 221
Target Start/End: Original strand, 35919277 - 35919315
Alignment:
Q  183 gacactgacacatataattacactgaattatgtgatttt 221  Q
    ||||| ||||| |||||||||||||||||||||||||||    
T  35919277 gacacggacacttataattacactgaattatgtgatttt 35919315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 223
Target Start/End: Original strand, 39130754 - 39130808
Alignment:
Q  169 cacgtgtcgtgtctgacactgacacatataattacactgaattatgtgattttct 223  Q
    ||||||| ||||| ||||| |||||||||||||||||| |||||| | |||||||    
T  39130754 cacgtgttgtgtccgacaccgacacatataattacactaaattatataattttct 39130808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 223
Target Start/End: Original strand, 39953141 - 39953187
Alignment:
Q  177 gtgtctgacactgacacatataattacactgaattatgtgattttct 223  Q
    ||||| ||||| |||||||| ||||||||| ||||||||||||||||    
T  39953141 gtgtccgacaccgacacatacaattacactaaattatgtgattttct 39953187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 223
Target Start/End: Complemental strand, 6427401 - 6427368
Alignment:
Q  190 acacatataattacactgaattatgtgattttct 223  Q
    ||||||||||||||| ||||||||||||||||||    
T  6427401 acacatataattacattgaattatgtgattttct 6427368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 184 - 221
Target Start/End: Complemental strand, 17754368 - 17754331
Alignment:
Q  184 acactgacacatataattacactgaattatgtgatttt 221  Q
    ||||||||||||||| |||||||||||||||| |||||    
T  17754368 acactgacacatatagttacactgaattatgtaatttt 17754331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 221
Target Start/End: Original strand, 22881606 - 22881655
Alignment:
Q  172 gtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 221  Q
    |||||||||| ||||| ||||| | |||||||||| ||||||||||||||    
T  22881606 gtgtcgtgtccgacaccgacacttgtaattacactaaattatgtgatttt 22881655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 168 - 221
Target Start/End: Complemental strand, 26830660 - 26830608
Alignment:
Q  168 acacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 221  Q
    |||||||| ||||||||||| ||||| |||||||||| | ||||||||||||||    
T  26830660 acacgtgtagtgtctgacac-gacacttataattacatttaattatgtgatttt 26830608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 223
Target Start/End: Complemental strand, 36906048 - 36906015
Alignment:
Q  190 acacatataattacactgaattatgtgattttct 223  Q
    |||||||||||||| |||||||||||||||||||    
T  36906048 acacatataattactctgaattatgtgattttct 36906015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 189 - 221
Target Start/End: Original strand, 398772 - 398804
Alignment:
Q  189 gacacatataattacactgaattatgtgatttt 221  Q
    ||||| |||||||||||||||||||||||||||    
T  398772 gacacctataattacactgaattatgtgatttt 398804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 191 - 223
Target Start/End: Original strand, 12443469 - 12443501
Alignment:
Q  191 cacatataattacactgaattatgtgattttct 223  Q
    |||||| ||||||||||||||||||||||||||    
T  12443469 cacatacaattacactgaattatgtgattttct 12443501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 223
Target Start/End: Complemental strand, 21038141 - 21038101
Alignment:
Q  183 gacactgacacatataattacactgaattatgtgattttct 223  Q
    ||||||||| ||||| ||||||||||||||||| |||||||    
T  21038141 gacactgacgcatatgattacactgaattatgtaattttct 21038101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 223
Target Start/End: Complemental strand, 25272540 - 25272500
Alignment:
Q  183 gacactgacacatataattacactgaattatgtgattttct 223  Q
    ||||| ||||| |||||||||||| ||||||||||||||||    
T  25272540 gacaccgacacttataattacactaaattatgtgattttct 25272500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 223
Target Start/End: Complemental strand, 34298482 - 34298454
Alignment:
Q  195 tataattacactgaattatgtgattttct 223  Q
    |||||||||||||||||||||||||||||    
T  34298482 tataattacactgaattatgtgattttct 34298454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 223
Target Start/End: Complemental strand, 38503378 - 38503338
Alignment:
Q  183 gacactgacacatataattacactgaattatgtgattttct 223  Q
    ||||| ||||||||||||||||||||| ||| |||||||||    
T  38503378 gacaccgacacatataattacactgaaatatatgattttct 38503338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 194
Target Start/End: Original strand, 41597410 - 41597482
Alignment:
Q  122 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacaca 194  Q
    |||||||||||  ||||| || |||||| | || | | |||||||||||||||||||||| ||||| ||||||    
T  41597410 ctatgaagcacagacactccttggataaagcgtatccccgtgtcagacacgtgtcgtgtccgacacggacaca 41597482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 193
Target Start/End: Complemental strand, 47989628 - 47989556
Alignment:
Q  121 actatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacac 193  Q
    ||||||||||||| ||||| ||||||| ||| |||| |   ||||||||| |||||||||| ||||| |||||    
T  47989628 actatgaagcacggacactcctcggattaggcgtgtcccgatgtcagacatgtgtcgtgtccgacaccgacac 47989556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 56; Significance: 3e-23; HSPs: 43)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 124 - 223
Target Start/End: Complemental strand, 3025668 - 3025569
Alignment:
Q  124 atgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgattttct 223  Q
    |||||||||| ||||| ||||||| ||  ||||    ||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  3025668 atgaagcacggacactcctcggattagccgtgtcacagtgtcagacacgtgtcgtgtccgacactgacacctataattacactgaattatgtgattttct 3025569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 122 - 221
Target Start/End: Original strand, 3951476 - 3951575
Alignment:
Q  122 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 221  Q
    |||||||||||| | ||| || |||| ||| |||||| |||||||||||||||||||||||||||| ||||||||||| ||||||| ||| |||||||||    
T  3951476 ctatgaagcacggaaactccttggattaggcgtgttcccgtgtcagacacgtgtcgtgtctgacaccgacacatataagtacactgcattttgtgatttt 3951575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 123 - 222
Target Start/End: Original strand, 43737752 - 43737851
Alignment:
Q  123 tatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgattttc 222  Q
    ||||||||||| ||||| || |||||||| || | | |||||||||||| ||||||||| ||||| ||||||||||||||||||| ||| ||||||||||    
T  43737752 tatgaagcacggacactccttggataaggcgtatccccgtgtcagacacctgtcgtgtccgacaccgacacatataattacactgtattttgtgattttc 43737851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 122 - 223
Target Start/End: Complemental strand, 14134818 - 14134717
Alignment:
Q  122 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 221  Q
    ||||||| |||| ||||| |||| || ||| |||| || ||| | |||||||||||||| |||||| |||| ||||||||||||||||||||||||||||    
T  14134818 ctatgaaacacggacactcctcgaattaggcgtgtcctggtgacggacacgtgtcgtgtttgacaccgacatatataattacactgaattatgtgatttt 14134719  T
Q  222 ct 223  Q
    ||    
T  14134718 ct 14134717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 124 - 223
Target Start/End: Original strand, 20679337 - 20679436
Alignment:
Q  124 atgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgattttct 223  Q
    |||||||| | ||||| ||||| ||||| |||| |  ||||| ||||||||| | ||||||||| ||||| ||||||||||||||| |||||||||||||    
T  20679337 atgaagcatggacactcctcggttaaggcgtgtcccggtgtcggacacgtgttgcgtctgacaccgacacttataattacactgaactatgtgattttct 20679436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 122 - 223
Target Start/End: Original strand, 26902104 - 26902216
Alignment:
Q  122 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacact-----------gacacatataattacactgaat 210  Q
    |||||||||||| ||||| ||| ||||||| |||| | |||| ||||||||||||||||| ||||||           ||||||||||||||||||||||    
T  26902104 ctatgaagcacggacactcctcagataaggcgtgtccccgtgccagacacgtgtcgtgtccgacactcatacgacaccgacacatataattacactgaat 26902203  T
Q  211 tatgtgattttct 223  Q
    |||||||||||||    
T  26902204 tatgtgattttct 26902216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 161 - 223
Target Start/End: Original strand, 33405363 - 33405425
Alignment:
Q  161 gtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgattttct 223  Q
    |||||||||| |||||||||| ||||| |||||||||||||||||| ||||||||| ||||||    
T  33405363 gtgtcagacatgtgtcgtgtccgacaccgacacatataattacactaaattatgtgtttttct 33405425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 119 - 193
Target Start/End: Original strand, 34450958 - 34451032
Alignment:
Q  119 acactatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacac 193  Q
    ||||||||||||||| ||||| || |||||||| |||| | |||||||||||||||||||||| ||||| |||||    
T  34450958 acactatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 34451032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 168 - 223
Target Start/End: Original strand, 4786324 - 4786379
Alignment:
Q  168 acacgtgtcgtgtctgacactgacacatataattacactgaattatgtgattttct 223  Q
    |||| |||||| || ||||| |||||||||||||||||||||||||||||||||||    
T  4786324 acacatgtcgtatccgacaccgacacatataattacactgaattatgtgattttct 4786379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 122 - 221
Target Start/End: Original strand, 36450694 - 36450793
Alignment:
Q  122 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 221  Q
    |||||||||||  ||||| ||||||| ||| |||| || ||||| |||||| |||||||| |||||  |||| | ||||||||||||||| |||||||||    
T  36450694 ctatgaagcacagacactcctcggattaggcgtgtcctggtgtcggacacgcgtcgtgtccgacacctacacttgtaattacactgaattctgtgatttt 36450793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 144 - 221
Target Start/End: Complemental strand, 31557093 - 31557016
Alignment:
Q  144 ggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 221  Q
    |||| ||| |||| || ||||| |||| |||||||||||||||| || || | |||||||||||||||||||||||||    
T  31557093 ggattaggcgtgtcctggtgtcggacatgtgtcgtgtctgacaccgaaacttgtaattacactgaattatgtgatttt 31557016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 167 - 219
Target Start/End: Original strand, 9414860 - 9414912
Alignment:
Q  167 gacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatt 219  Q
    |||||||||||||||||||||  |||| ||||||| |||||||||||||||||    
T  9414860 gacacgtgtcgtgtctgacaccaacacttataattgcactgaattatgtgatt 9414912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 40332265 - 40332209
Alignment:
Q  167 gacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgattttct 223  Q
    |||||||||||||||  |||| ||||| | |||||||||||||||||||||||||||    
T  40332265 gacacgtgtcgtgtcccacaccgacacttgtaattacactgaattatgtgattttct 40332209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 124 - 223
Target Start/End: Original strand, 926730 - 926829
Alignment:
Q  124 atgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgattttct 223  Q
    |||||||||| ||||| ||||||||| |  ||| |  ||||| ||||||||||| ||| ||||| ||||| |||||||||||||||  ||| ||||||||    
T  926730 atgaagcacggacactcctcggataaagcatgtcccggtgtcggacacgtgtcgcgtccgacaccgacacttataattacactgaacaatgagattttct 926829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 135 - 218
Target Start/End: Complemental strand, 8293931 - 8293848
Alignment:
Q  135 acacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgat 218  Q
    ||||| ||||||| ||| |||| |  |||||||| | ||||| ||| |||||| |||||||||||||||||||||||| |||||    
T  8293931 acactcctcggattaggtgtgtccaggtgtcagatatgtgtcatgtttgacaccgacacatataattacactgaattacgtgat 8293848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 122 - 221
Target Start/End: Complemental strand, 18407838 - 18407739
Alignment:
Q  122 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 221  Q
    |||||||||||| ||||| |||  || ||| |||| || ||||| |||| |||||||||| | ||  ||||| | |||||||||||||||||||||||||    
T  18407838 ctatgaagcacggacactcctccaattaggcgtgtcctagtgtcggacatgtgtcgtgtccggcagcgacacttgtaattacactgaattatgtgatttt 18407739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 183 - 221
Target Start/End: Original strand, 11927087 - 11927125
Alignment:
Q  183 gacactgacacatataattacactgaattatgtgatttt 221  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  11927087 gacaccgacacatataattacactgaattatgtgatttt 11927125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 177 - 223
Target Start/End: Original strand, 13844591 - 13844637
Alignment:
Q  177 gtgtctgacactgacacatataattacactgaattatgtgattttct 223  Q
    ||||| ||||| |||||||||||||||||| ||||||||||||||||    
T  13844591 gtgtccgacaccgacacatataattacactcaattatgtgattttct 13844637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 189 - 223
Target Start/End: Complemental strand, 34897137 - 34897103
Alignment:
Q  189 gacacatataattacactgaattatgtgattttct 223  Q
    |||||||||||||||||||||||||||||||||||    
T  34897137 gacacatataattacactgaattatgtgattttct 34897103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 166 - 223
Target Start/End: Original strand, 37283796 - 37283851
Alignment:
Q  166 agacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgattttct 223  Q
    ||||||||||||||||  |||| ||||||||  |||||||||||||||||||||||||    
T  37283796 agacacgtgtcgtgtcccacaccgacacata--attacactgaattatgtgattttct 37283851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 167 - 204
Target Start/End: Original strand, 126332 - 126369
Alignment:
Q  167 gacacgtgtcgtgtctgacactgacacatataattaca 204  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  126332 gacacgtgtcgtgtccgacactgacacatataattaca 126369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 183 - 220
Target Start/End: Complemental strand, 8847314 - 8847277
Alignment:
Q  183 gacactgacacatataattacactgaattatgtgattt 220  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  8847314 gacaccgacacatataattacactgaattatgtgattt 8847277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 223
Target Start/End: Complemental strand, 11803310 - 11803277
Alignment:
Q  190 acacatataattacactgaattatgtgattttct 223  Q
    ||||||||||||||||||||||||||||||||||    
T  11803310 acacatataattacactgaattatgtgattttct 11803277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 223
Target Start/End: Original strand, 12606825 - 12606870
Alignment:
Q  178 tgtctgacactgacacatataattacactgaattatgtgattttct 223  Q
    |||||||||| |||||||||||||||| |||||||| |||||||||    
T  12606825 tgtctgacaccgacacatataattacattgaattatatgattttct 12606870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 122 - 215
Target Start/End: Original strand, 24413499 - 24413592
Alignment:
Q  122 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgt 215  Q
    |||||||||||| ||||||||||||| ||  |||| |   |||  ||||||  ||||||| ||||||||||| ||||||||| |||||||||||    
T  24413499 ctatgaagcacggacacttctcggattagacgtgtcccgctgttggacacgcatcgtgtccgacactgacacttataattaccctgaattatgt 24413592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 183 - 219
Target Start/End: Original strand, 24362203 - 24362239
Alignment:
Q  183 gacactgacacatataattacactgaattatgtgatt 219  Q
    |||| ||||||||||||||||||||||||||||||||    
T  24362203 gacattgacacatataattacactgaattatgtgatt 24362239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 175 - 223
Target Start/End: Original strand, 31236570 - 31236618
Alignment:
Q  175 tcgtgtctgacactgacacatataattacactgaattatgtgattttct 223  Q
    ||||||| | ||| |||||||||||||||| ||||||||||||||||||    
T  31236570 tcgtgtccgtcaccgacacatataattacattgaattatgtgattttct 31236618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 184 - 223
Target Start/End: Complemental strand, 18964234 - 18964195
Alignment:
Q  184 acactgacacatataattacactgaattatgtgattttct 223  Q
    |||| |||||||||||||||| ||||||||||||||||||    
T  18964234 acaccgacacatataattacattgaattatgtgattttct 18964195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 221
Target Start/End: Complemental strand, 4948718 - 4948672
Alignment:
Q  175 tcgtgtctgacactgacacatataattacactgaattatgtgatttt 221  Q
    ||||||| ||||| ||||| | |||||||||||||||||||||||||    
T  4948718 tcgtgtccgacaccgacacttgtaattacactgaattatgtgatttt 4948672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 221
Target Start/End: Complemental strand, 11944723 - 11944685
Alignment:
Q  183 gacactgacacatataattacactgaattatgtgatttt 221  Q
    ||||| |||||||||||||||||||| ||||||||||||    
T  11944723 gacaccgacacatataattacactgagttatgtgatttt 11944685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 221
Target Start/End: Complemental strand, 20873143 - 20873089
Alignment:
Q  167 gacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 221  Q
    ||||||| ||||||| ||||| ||||| | |||||||||| ||||||||||||||    
T  20873143 gacacgtatcgtgtccgacaccgacacttgtaattacactaaattatgtgatttt 20873089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 223
Target Start/End: Complemental strand, 27213599 - 27213565
Alignment:
Q  189 gacacatataattacactgaattatgtgattttct 223  Q
    |||||||||||||||| ||||||||||||||||||    
T  27213599 gacacatataattacagtgaattatgtgattttct 27213565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 220
Target Start/End: Original strand, 28384994 - 28385032
Alignment:
Q  182 tgacactgacacatataattacactgaattatgtgattt 220  Q
    |||||| |||||||||||||||||||||||||| |||||    
T  28384994 tgacaccgacacatataattacactgaattatgagattt 28385032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 223
Target Start/End: Complemental strand, 38079079 - 38079017
Alignment:
Q  161 gtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgattttct 223  Q
    ||||| |||| | |||||||| ||||  ||| |||||||||||||||||| ||||||||||||    
T  38079079 gtgtcggacatgcgtcgtgtccgacatcgacgcatataattacactgaatcatgtgattttct 38079017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 223
Target Start/End: Complemental strand, 39820547 - 39820447
Alignment:
Q  122 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtc-gtgtctgacactgacacatataattacactgaattatgtgattt 220  Q
    |||||||||||| ||||||||||||| ||| ||| || |||||| |||||| ||| ||||| ||||| ||||| ||| |||||||| |||||| | ||||    
T  39820547 ctatgaagcacggacacttctcggattaggcgtg-tcccgtgtcggacacgcgtcggtgtccgacac-gacacctatgattacactaaattatatcattt 39820450  T
Q  221 tct 223  Q
    |||    
T  39820449 tct 39820447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 223
Target Start/End: Complemental strand, 14731763 - 14731730
Alignment:
Q  190 acacatataattacactgaattatgtgattttct 223  Q
    ||||||||||||||||| ||||||||||||||||    
T  14731763 acacatataattacactaaattatgtgattttct 14731730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 176 - 213
Target Start/End: Complemental strand, 22204706 - 22204669
Alignment:
Q  176 cgtgtctgacactgacacatataattacactgaattat 213  Q
    |||||||||||||||||| | |||||||||||||||||    
T  22204706 cgtgtctgacactgacacttgtaattacactgaattat 22204669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 192
Target Start/End: Original strand, 29447040 - 29447109
Alignment:
Q  123 tatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgaca 192  Q
    ||||||||||| ||||| || |||| ||| |||| || ||||||||||| ||||||||| ||||| ||||    
T  29447040 tatgaagcacggacactcctaggattaggcgtgtcctggtgtcagacacatgtcgtgtccgacaccgaca 29447109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 126 - 223
Target Start/End: Original strand, 31580071 - 31580168
Alignment:
Q  126 gaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgattttct 223  Q
    |||||| ||||||  ||||||| ||| |||||   |||||  ||| |||||| ||| ||||  ||||| |||||||||||| ||||||||||||||||    
T  31580071 gaagcatgaacacccctcggattaggtgtgtttcggtgtcgaacatgtgtcgcgtccgacatcgacacctataattacactcaattatgtgattttct 31580168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 223
Target Start/End: Original strand, 33382019 - 33382060
Alignment:
Q  182 tgacactgacacatataattacactgaattatgtgattttct 223  Q
    |||||| ||||||||||||||| ||||||||||| |||||||    
T  33382019 tgacaccgacacatataattactctgaattatgtcattttct 33382060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 223
Target Start/End: Original strand, 31109463 - 31109559
Alignment:
Q  127 aagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgattttct 223  Q
    ||||||| ||||| ||||||| ||| |||| |  |||||| |||||   | |||| |||||||||||||||| ||| |||||||| | |||||||||    
T  31109463 aagcacggacactcctcggattaggcgtgtcccagtgtcatacacgacacatgtccgacactgacacatatagttagactgaattgtttgattttct 31109559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 189 - 221
Target Start/End: Complemental strand, 34222999 - 34222967
Alignment:
Q  189 gacacatataattacactgaattatgtgatttt 221  Q
    |||||||||||||||||| ||||||||||||||    
T  34222999 gacacatataattacacttaattatgtgatttt 34222967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 191 - 223
Target Start/End: Original strand, 39954288 - 39954320
Alignment:
Q  191 cacatataattacactgaattatgtgattttct 223  Q
    |||||||||||||||| ||||||||||||||||    
T  39954288 cacatataattacactaaattatgtgattttct 39954320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 56; Significance: 3e-23; HSPs: 55)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 122 - 221
Target Start/End: Complemental strand, 34595253 - 34595154
Alignment:
Q  122 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 221  Q
    |||||||||||| ||||| ||||||| ||| |||| |  ||||||||||||||||||||| ||||| ||||| | |||||||||||||||||||||||||    
T  34595253 ctatgaagcacggacactcctcggattaggtgtgtcccggtgtcagacacgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtgatttt 34595154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 123 - 223
Target Start/End: Complemental strand, 9658998 - 9658897
Alignment:
Q  123 tatgaagcacgaacacttctcgga-taaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 221  Q
    ||||||||||| ||||| || ||| | ||| ||||||  |||||||||||||||||||||| |||| |||| ||||||||||||||||||||||||||||    
T  9658998 tatgaagcacggacactccttggaattaggcgtgttccggtgtcagacacgtgtcgtgtctaacaccgacaaatataattacactgaattatgtgatttt 9658899  T
Q  222 ct 223  Q
    ||    
T  9658898 ct 9658897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 121 - 221
Target Start/End: Complemental strand, 28152218 - 28152118
Alignment:
Q  121 actatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgattt 220  Q
    ||||||||||||||||||| ||||||| |||  ||| |  ||||| ||||||||||||||| ||||| ||||| | ||||||||||||||||||||||||    
T  28152218 actatgaagcacgaacactcctcggattaggcctgtcccggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtgattt 28152119  T
Q  221 t 221  Q
    |    
T  28152118 t 28152118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 122 - 223
Target Start/End: Original strand, 17327590 - 17327696
Alignment:
Q  122 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtc-----tgacactgacacatataattacactgaattatgtg 216  Q
    |||||||||||| ||||| ||||||| ||| |||| |  |||||||||||||||||||||      |||||||||||||||| ||||||| |||||||||    
T  17327590 ctatgaagcacggacactcctcggattaggcgtgtccctgtgtcagacacgtgtcgtgtccgacacgacactgacacatatagttacactaaattatgtg 17327689  T
Q  217 attttct 223  Q
    |||||||    
T  17327690 attttct 17327696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 161 - 221
Target Start/End: Original strand, 33001268 - 33001328
Alignment:
Q  161 gtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 221  Q
    ||||||||||||||||||||| ||||| |||||||||||||||| | ||||||||||||||    
T  33001268 gtgtcagacacgtgtcgtgtccgacaccgacacatataattacatttaattatgtgatttt 33001328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 172 - 223
Target Start/End: Complemental strand, 19040421 - 19040370
Alignment:
Q  172 gtgtcgtgtctgacactgacacatataattacactgaattatgtgattttct 223  Q
    |||||||||| ||||| |||||||||||||||||||||||||||||||||||    
T  19040421 gtgtcgtgtccgacacagacacatataattacactgaattatgtgattttct 19040370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 122 - 221
Target Start/End: Complemental strand, 28715414 - 28715315
Alignment:
Q  122 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 221  Q
    |||||||||||| |||||||||| || ||| |||| |  |||||  |||||||||||||| ||||| ||||| | ||||||||||||||||||| |||||    
T  28715414 ctatgaagcacgtacacttctcgaattaggcgtgtcccggtgtcgaacacgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtcatttt 28715315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 122 - 223
Target Start/End: Complemental strand, 7378098 - 7377997
Alignment:
Q  122 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 221  Q
    |||||||||||| ||||||||| ||| ||  |||| |  ||||| ||  | ||||||||| ||||| |||||||||||||||| ||||||||||||||||    
T  7378098 ctatgaagcacggacacttctcagattagccgtgtcccggtgtcggatgcatgtcgtgtccgacaccgacacatataattacattgaattatgtgatttt 7377999  T
Q  222 ct 223  Q
    ||    
T  7377998 ct 7377997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 122 - 223
Target Start/End: Complemental strand, 4388199 - 4388103
Alignment:
Q  122 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 221  Q
    |||||||||||  ||||||||||||||||| |||| ||||||||||||||    ||   | ||||||||||||||||||||| ||| |||||||||||||    
T  4388199 ctatgaagcacagacacttctcggataaggcgtgtcctcgtgtcagacac----cgccac-gacactgacacatataattaccctggattatgtgatttt 4388105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 170 - 222
Target Start/End: Complemental strand, 7740712 - 7740660
Alignment:
Q  170 acgtgtcgtgtctgacactgacacatataattacactgaattatgtgattttc 222  Q
    |||||||||||| |||||||||||||||||||||||| |||| ||||||||||    
T  7740712 acgtgtcgtgtccgacactgacacatataattacactcaattttgtgattttc 7740660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 56
Target Start/End: Original strand, 11968709 - 11968749
Alignment:
Q  16 acaactaaaatcaaacatgaacataacataaacattcatgc 56  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  11968709 acaactaaaatcaaacatgaacataacataaacattcatgc 11968749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 124 - 223
Target Start/End: Original strand, 7265535 - 7265634
Alignment:
Q  124 atgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgattttct 223  Q
    |||||||||| || || ||||||| |||  | |||  ||||| |||| || | ||||| ||||| |||||||||||||||||||||||||||||||||||    
T  7265535 atgaagcacggacgctcctcggattaggcatattccggtgtcggacatgtattgtgtccgacaccgacacatataattacactgaattatgtgattttct 7265634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 121 - 223
Target Start/End: Original strand, 13360312 - 13360413
Alignment:
Q  121 actatgaagcacgaacacttctcggataaggagtgttctc-gtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatt 219  Q
    ||||||||||||| |||||  |||||| ||| |||| ||| ||||| ||||  ||| ||||||||||| || ||||||||||||||||||||||||||||    
T  13360312 actatgaagcacggacactcttcggattaggcgtgt-ctcagtgtcggacat-tgttgtgtctgacaccgaaacatataattacactgaattatgtgatt 13360409  T
Q  220 ttct 223  Q
    ||||    
T  13360410 ttct 13360413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 122 - 221
Target Start/End: Complemental strand, 13789273 - 13789174
Alignment:
Q  122 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 221  Q
    |||||||||||||||||| || | |||||| || | | | ||||||||||||||| |||| |||| ||| |||||||||||||||| ||| | |||||||    
T  13789273 ctatgaagcacgaacactccttgaataaggcgtatccccatgtcagacacgtgtcatgtccgacattgatacatataattacactgcattttatgatttt 13789174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 122 - 221
Target Start/End: Complemental strand, 13797892 - 13797793
Alignment:
Q  122 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 221  Q
    |||||||||||||||||| || | |||||| || | | | ||||||||||||||| |||| |||| ||| |||||||||||||||| ||| | |||||||    
T  13797892 ctatgaagcacgaacactccttgaataaggcgtatccccatgtcagacacgtgtcatgtccgacattgatacatataattacactgcattttatgatttt 13797793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 122 - 193
Target Start/End: Complemental strand, 18367966 - 18367895
Alignment:
Q  122 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacac 193  Q
    |||||||||||| ||||| || |||||||| |||| | ||||||||||| |||||||||||||||| |||||    
T  18367966 ctatgaagcacggacactccttggataaggcgtgtccccgtgtcagacatgtgtcgtgtctgacaccgacac 18367895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 108 - 223
Target Start/End: Original strand, 32511592 - 32511707
Alignment:
Q  108 acattagttggacactatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactg 207  Q
    |||||| ||||  ||||||||||||| ||||| ||| ||| ||| ||| ||   |||||||||  |||||| || |||||  |||| |||||||||||||    
T  32511592 acattatttgggaactatgaagcacggacactcctccgattaggcgtgctccgatgtcagacatatgtcgtatccgacaccaacacttataattacactg 32511691  T
Q  208 aattatgtgattttct 223  Q
    ||||||||||||||||    
T  32511692 aattatgtgattttct 32511707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 183 - 223
Target Start/End: Original strand, 9025495 - 9025535
Alignment:
Q  183 gacactgacacatataattacactgaattatgtgattttct 223  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  9025495 gacaccgacacatataattacactgaattatgtgattttct 9025535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 121 - 193
Target Start/End: Original strand, 16488518 - 16488590
Alignment:
Q  121 actatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacac 193  Q
    ||||||||||||||||| | || |||||||| |||| | |||| ||||||||||||||||| ||||| |||||    
T  16488518 actatgaagcacgaacattccttggataaggcgtgtccccgtgccagacacgtgtcgtgtccgacaccgacac 16488590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 161 - 221
Target Start/End: Complemental strand, 24645561 - 24645501
Alignment:
Q  161 gtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 221  Q
    ||||| ||||||||||||||||||||| ||||| | ||| || ||||||||||||||||||    
T  24645561 gtgtcggacacgtgtcgtgtctgacaccgacacttgtaactatactgaattatgtgatttt 24645501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 122 - 217
Target Start/End: Complemental strand, 4878061 - 4877967
Alignment:
Q  122 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtga 217  Q
    |||||||||||| ||||| ||||||| ||| |||| || ||||| |||| |||||||||| ||||| ||||| | |||||| ||| ||||||||||    
T  4878061 ctatgaagcacggacactcctcggattaggcgtgtcct-gtgtcggacatgtgtcgtgtccgacaccgacacttgtaattatacttaattatgtga 4877967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 139 - 221
Target Start/End: Original strand, 12627534 - 12627616
Alignment:
Q  139 ttctcggataaggagtgttctcg-tgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 221  Q
    ||||||||| |||||||| |||| |||| |||| |||| ||||| ||||  ||||||||| |||||||||||||||||||||||    
T  12627534 ttctcggattaggagtgt-ctcggtgtcggacatgtgtggtgtccgacatcgacacatattattacactgaattatgtgatttt 12627616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 122 - 221
Target Start/End: Complemental strand, 16833427 - 16833328
Alignment:
Q  122 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 221  Q
    |||||||| ||  ||||| |||||||  || |||| || ||||| ||| |||||||||||| |||| ||||| | ||||||||||||| |||||||||||    
T  16833427 ctatgaagtacagacactcctcggattcggtgtgtcctggtgtcggacgcgtgtcgtgtctaacaccgacacttgtaattacactgaagtatgtgatttt 16833328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 123 - 221
Target Start/End: Original strand, 17841530 - 17841628
Alignment:
Q  123 tatgaagcacgaacacttctcggataaggagtgttctc-gtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 221  Q
    ||||||||||| ||||| ||||||| ||| |||| ||| ||||| ||||| ||||||||| ||||| | ||| | |||||||||| ||||||||||||||    
T  17841530 tatgaagcacggacactcctcggattaggcgtgt-ctcagtgtcggacacatgtcgtgtccgacaccgtcacttgtaattacactaaattatgtgatttt 17841628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 165 - 223
Target Start/End: Complemental strand, 30851676 - 30851620
Alignment:
Q  165 cagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgattttct 223  Q
    ||||||||||||||||| ||||| |||||||||||||||| |||||  |||||||||||    
T  30851676 cagacacgtgtcgtgtccgacaccgacacatataattacattgaat--tgtgattttct 30851620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 183 - 221
Target Start/End: Complemental strand, 7027300 - 7027262
Alignment:
Q  183 gacactgacacatataattacactgaattatgtgatttt 221  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  7027300 gacaccgacacatataattacactgaattatgtgatttt 7027262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 189 - 223
Target Start/End: Original strand, 11591877 - 11591911
Alignment:
Q  189 gacacatataattacactgaattatgtgattttct 223  Q
    |||||||||||||||||||||||||||||||||||    
T  11591877 gacacatataattacactgaattatgtgattttct 11591911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 124 - 221
Target Start/End: Complemental strand, 12696446 - 12696344
Alignment:
Q  124 atgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtc-----tgacactgacacatataattacactgaattatgtgat 218  Q
    |||||||||  ||||| || |||||||| |||| |  |||||||||||||||||||||      ||||||||||| | ||||||||||||||||||| ||    
T  12696446 atgaagcacagacactccttggataaggtgtgtcccggtgtcagacacgtgtcgtgtccgacacgacactgacacttgtaattacactgaattatgtaat 12696347  T
Q  219 ttt 221  Q
    |||    
T  12696346 ttt 12696344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 161 - 223
Target Start/End: Original strand, 13364684 - 13364746
Alignment:
Q  161 gtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgattttct 223  Q
    |||||||||| || |||||||  |||| ||||||||| ||||||||||||||| |||||||||    
T  13364684 gtgtcagacatgtatcgtgtccaacaccgacacatatgattacactgaattatatgattttct 13364746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 189 - 223
Target Start/End: Complemental strand, 26562741 - 26562707
Alignment:
Q  189 gacacatataattacactgaattatgtgattttct 223  Q
    |||||||||||||||||||||||||||||||||||    
T  26562741 gacacatataattacactgaattatgtgattttct 26562707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 92 - 125
Target Start/End: Original strand, 11968749 - 11968782
Alignment:
Q  92 cgatatagtaaaaggtacattagttggacactat 125  Q
    ||||||||||||||||||||||||||||||||||    
T  11968749 cgatatagtaaaaggtacattagttggacactat 11968782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 168 - 221
Target Start/End: Complemental strand, 29020985 - 29020932
Alignment:
Q  168 acacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 221  Q
    |||||||||||||| |||||  |||| |||||||||||||||||||| ||||||    
T  29020985 acacgtgtcgtgtccgacacaaacacctataattacactgaattatgcgatttt 29020932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 31579212 - 31579266
Alignment:
Q  167 gacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgattttct 223  Q
    |||| |||||||||| ||||| ||||||||  |||||||||||||||||||||||||    
T  31579212 gacatgtgtcgtgtccgacaccgacacata--attacactgaattatgtgattttct 31579266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 183 - 223
Target Start/End: Complemental strand, 9617492 - 9617452
Alignment:
Q  183 gacactgacacatataattacactgaattatgtgattttct 223  Q
    ||||| |||||||||||||||| ||||||||||||||||||    
T  9617492 gacaccgacacatataattacattgaattatgtgattttct 9617452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 183 - 223
Target Start/End: Complemental strand, 9629441 - 9629401
Alignment:
Q  183 gacactgacacatataattacactgaattatgtgattttct 223  Q
    ||||| |||||||||||||||| ||||||||||||||||||    
T  9629441 gacaccgacacatataattacattgaattatgtgattttct 9629401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 176 - 223
Target Start/End: Original strand, 5732504 - 5732551
Alignment:
Q  176 cgtgtctgacactgacacatataattacactgaattatgtgattttct 223  Q
    |||||| ||||| |||||||||||||||||| || |||||||||||||    
T  5732504 cgtgtccgacaccgacacatataattacactaaaatatgtgattttct 5732551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 184 - 223
Target Start/End: Complemental strand, 7086852 - 7086813
Alignment:
Q  184 acactgacacatataattacactgaattatgtgattttct 223  Q
    |||| |||||||||||||||||| ||||||||||||||||    
T  7086852 acaccgacacatataattacactaaattatgtgattttct 7086813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 182 - 221
Target Start/End: Complemental strand, 8101144 - 8101105
Alignment:
Q  182 tgacactgacacatataattacactgaattatgtgatttt 221  Q
    |||||||||||||||||||||||||| ||||| |||||||    
T  8101144 tgacactgacacatataattacactggattatatgatttt 8101105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 185 - 223
Target Start/End: Original strand, 10339128 - 10339167
Alignment:
Q  185 cactgacacatataatta-cactgaattatgtgattttct 223  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  10339128 cactgacacatataattaacactgaattatgtgattttct 10339167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 220
Target Start/End: Original strand, 6898221 - 6898319
Alignment:
Q  122 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgattt 220  Q
    ||||||||||||||||||  |||||| ||| |||||   ||||  ||||||  ||||||| ||||| ||||| | |||||||||| |||||||| ||||    
T  6898221 ctatgaagcacgaacactcatcggattaggcgtgtttcggtgttggacacgcttcgtgtccgacaccgacacttgtaattacacttaattatgtaattt 6898319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 213
Target Start/End: Original strand, 9750450 - 9750480
Alignment:
Q  183 gacactgacacatataattacactgaattat 213  Q
    |||||||||||||||||||||||||||||||    
T  9750450 gacactgacacatataattacactgaattat 9750480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 221
Target Start/End: Original strand, 17341669 - 17341703
Alignment:
Q  187 ctgacacatataattacactgaattatgtgatttt 221  Q
    ||||||| |||||||||||||||||||||||||||    
T  17341669 ctgacacttataattacactgaattatgtgatttt 17341703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 223
Target Start/End: Original strand, 21924930 - 21924976
Alignment:
Q  177 gtgtctgacactgacacatataattacactgaattatgtgattttct 223  Q
    ||||| ||||| ||||||||||||||||||||||||| |||| ||||    
T  21924930 gtgtccgacaccgacacatataattacactgaattatttgatattct 21924976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 223
Target Start/End: Original strand, 30866151 - 30866185
Alignment:
Q  189 gacacatataattacactgaattatgtgattttct 223  Q
    |||||||||||||||| ||||||||||||||||||    
T  30866151 gacacatataattacattgaattatgtgattttct 30866185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 221
Target Start/End: Complemental strand, 31384978 - 31384940
Alignment:
Q  183 gacactgacacatataattacactgaattatgtgatttt 221  Q
    ||||||||||| | |||||||||||||||||||||||||    
T  31384978 gacactgacacttgtaattacactgaattatgtgatttt 31384940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 218
Target Start/End: Original strand, 32298549 - 32298643
Alignment:
Q  124 atgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgat 218  Q
    |||||||| |||||||  ||  || ||| ||||||| ||||  ||||  |||| ||||||||||  ||||||||||||||||| |||||||||||    
T  32298549 atgaagcatgaacactcatcaaattaggcgtgttctggtgttggacatatgtcatgtctgacaccaacacatataattacactaaattatgtgat 32298643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 125 - 223
Target Start/End: Original strand, 7996325 - 7996419
Alignment:
Q  125 tgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgattttct 223  Q
    ||||||||| | ||| || |||| ||| |||| | ||||| ||||||||||||     ||||| ||| ||||||||||||||||||||| |||||||||    
T  7996325 tgaagcacggagactccttggattaggcgtgtccccgtgttagacacgtgtcg----cgacaccgacgcatataattacactgaattatatgattttct 7996419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 125 - 223
Target Start/End: Complemental strand, 8022476 - 8022382
Alignment:
Q  125 tgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgattttct 223  Q
    ||||||||| | ||| || |||| ||| |||| | ||||| ||||||||||||     ||||| ||| ||||||||||||||||||||| |||||||||    
T  8022476 tgaagcacggagactccttggattaggcgtgtccccgtgttagacacgtgtcg----cgacaccgacgcatataattacactgaattatatgattttct 8022382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 223
Target Start/End: Complemental strand, 19044523 - 19044482
Alignment:
Q  182 tgacactgacacatataattacactgaattatgtgattttct 223  Q
    |||||| |||||||||||| ||||||||||||||||| ||||    
T  19044523 tgacaccgacacatataataacactgaattatgtgatattct 19044482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 221
Target Start/End: Complemental strand, 1700416 - 1700372
Alignment:
Q  177 gtgtctgacactgacacatataattacactgaattatgtgatttt 221  Q
    ||||| ||||| ||||| ||||||||||||||| |||||||||||    
T  1700416 gtgtccgacaccgacacttataattacactgaaatatgtgatttt 1700372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 221
Target Start/End: Original strand, 7977770 - 7977869
Alignment:
Q  122 ctatgaagcacgaacacttctcggataaggagtgttctcgt-gtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgattt 220  Q
    |||||||||||||||||| ||  ||| ||| ||||| |||| ||| ||||  ||| ||||| ||||| ||||| | ||||||||||||||||||| ||||    
T  7977770 ctatgaagcacgaacactccttagattaggcgtgtt-tcgttgtcggacatatgttgtgtccgacaccgacacttgtaattacactgaattatgtaattt 7977868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 223
Target Start/End: Original strand, 9024177 - 9024217
Alignment:
Q  183 gacactgacacatataattacactgaattatgtgattttct 223  Q
    ||||||||||||||| |||||| |||||||||| |||||||    
T  9024177 gacactgacacatatgattacattgaattatgtcattttct 9024217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 219
Target Start/End: Complemental strand, 9027236 - 9027200
Alignment:
Q  183 gacactgacacatataattacactgaattatgtgatt 219  Q
    ||||| ||||||||||||||||| |||||||||||||    
T  9027236 gacaccgacacatataattacacggaattatgtgatt 9027200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 223
Target Start/End: Original strand, 9195755 - 9195795
Alignment:
Q  183 gacactgacacatataattacactgaattatgtgattttct 223  Q
    ||||| |||||||||||||||||| |||||||| |||||||    
T  9195755 gacaccgacacatataattacactaaattatgtcattttct 9195795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 223
Target Start/End: Original strand, 34073348 - 34073388
Alignment:
Q  183 gacactgacacatataattacactgaattatgtgattttct 223  Q
    ||||| ||| |||||||||||||||||||||| ||||||||    
T  34073348 gacaccgacccatataattacactgaattatgagattttct 34073388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 55; Significance: 1e-22; HSPs: 44)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 121 - 219
Target Start/End: Original strand, 30098977 - 30099075
Alignment:
Q  121 actatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatt 219  Q
    |||| |||||||||||||| || |||||||| |||| | ||||||||||||||||||| || ||||| ||||||||||||||||| |||||||| ||||    
T  30098977 actacgaagcacgaacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtatccgacaccgacacatataattacacagaattatgcgatt 30099075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 122 - 221
Target Start/End: Original strand, 21576685 - 21576784
Alignment:
Q  122 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 221  Q
    |||||||||||| ||||| ||||||| ||| |||| |  ||||||||||||||||||||| ||||  ||||| | |||||||||||||||||||||||||    
T  21576685 ctatgaagcacggacactcctcggattaggcgtgtcccagtgtcagacacgtgtcgtgtccgacatcgacacttgtaattacactgaattatgtgatttt 21576784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 122 - 223
Target Start/End: Complemental strand, 42029871 - 42029770
Alignment:
Q  122 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 221  Q
    |||||| ||||| ||||| ||||||||||| ||||   |||| |||||| |||||||||| ||||| || ||||||||||||| ||||||||||||||||    
T  42029871 ctatgatgcacggacactcctcggataaggcgtgtctacgtgacagacatgtgtcgtgtccgacaccgatacatataattacattgaattatgtgatttt 42029772  T
Q  222 ct 223  Q
    ||    
T  42029771 ct 42029770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 122 - 221
Target Start/End: Complemental strand, 43565000 - 43564901
Alignment:
Q  122 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 221  Q
    |||||||||||| ||||||||||||| ||| |||| |  | ||| ||||| ||||||||| ||||| ||||| |||||||||||| ||||||||||||||    
T  43565000 ctatgaagcacggacacttctcggattaggcgtgtcccggcgtcggacacatgtcgtgtccgacaccgacacttataattacactaaattatgtgatttt 43564901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 122 - 223
Target Start/End: Original strand, 28588614 - 28588715
Alignment:
Q  122 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 221  Q
    |||||||||| | |||||  |||||| | | |||| || |||||||| | |||||||||| ||||| ||||| |||||||||||||||||||||||||||    
T  28588614 ctatgaagcatggacactcttcggattaagcgtgtcctggtgtcagatatgtgtcgtgtccgacaccgacacctataattacactgaattatgtgatttt 28588713  T
Q  222 ct 223  Q
    ||    
T  28588714 ct 28588715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 135 - 223
Target Start/End: Complemental strand, 26312875 - 26312787
Alignment:
Q  135 acacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgattttct 223  Q
    ||||| ||||||| ||| |||| || ||||||||||||| ||||||| ||||| || |||||||||||||||||||||  |||||||||    
T  26312875 acactcctcggattaggtgtgtcctggtgtcagacacgtatcgtgtccgacaccgatacatataattacactgaattaattgattttct 26312787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 124 - 223
Target Start/End: Original strand, 30502330 - 30502429
Alignment:
Q  124 atgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgattttct 223  Q
    |||||||||||||| | || |||| |||  ||| |  ||||| |||| |||||||||| ||||| |||||||||||||||||||||||| ||||||||||    
T  30502330 atgaagcacgaacaatccttggattaggcatgtcccagtgtcggacatgtgtcgtgtccgacaccgacacatataattacactgaattaagtgattttct 30502429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 124 - 223
Target Start/End: Original strand, 30542673 - 30542772
Alignment:
Q  124 atgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgattttct 223  Q
    |||||||||||||| | || |||| |||  ||| |  ||||| |||| |||||||||| ||||| |||||||||||||||||||||||| ||||||||||    
T  30542673 atgaagcacgaacaatccttggattaggcatgtcccagtgtcggacatgtgtcgtgtccgacaccgacacatataattacactgaattaagtgattttct 30542772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 124 - 221
Target Start/End: Original strand, 21190998 - 21191095
Alignment:
Q  124 atgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 221  Q
    |||||||||| ||||| ||||||| ||| |||| |  | ||| ||||||||| ||||| ||||| ||||| | |||||||||||||||||||||||||    
T  21190998 atgaagcacggacactcctcggattaggcgtgtcccggagtcggacacgtgttgtgtccgacaccgacacttgtaattacactgaattatgtgatttt 21191095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 168 - 223
Target Start/End: Complemental strand, 12927727 - 12927672
Alignment:
Q  168 acacgtgtcgtgtctgacactgacacatataattacactgaattatgtgattttct 223  Q
    ||||||||| ||||||||||||||| ||||||||||||| |||||| |||||||||    
T  12927727 acacgtgtcatgtctgacactgacatatataattacactaaattatatgattttct 12927672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 122 - 221
Target Start/End: Complemental strand, 42893479 - 42893380
Alignment:
Q  122 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 221  Q
    |||||||||| | ||||| |||  || ||| |||| || ||||| ||||||||| ||||||||||| ||||| | ||||||||||| |||||||||||||    
T  42893479 ctatgaagcatggacactcctcatattaggcgtgtcctggtgtcggacacgtgttgtgtctgacaccgacacttgtaattacactggattatgtgatttt 42893380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 123 - 193
Target Start/End: Complemental strand, 6401627 - 6401557
Alignment:
Q  123 tatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacac 193  Q
    ||||||||||| ||||| || |||||||| || | | |||||||||||||||||||||| |||||||||||    
T  6401627 tatgaagcacggacactccttggataaggcgtatccccgtgtcagacacgtgtcgtgtccgacactgacac 6401557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 122 - 223
Target Start/End: Complemental strand, 27932354 - 27932253
Alignment:
Q  122 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 221  Q
    ||||||||||| |||||| |||| || ||| |||| || ||||| ||||||||||||||| |||||  | |  | ||||||||||||||||||| |||||    
T  27932354 ctatgaagcacaaacactcctcgaattaggcgtgtcctggtgtccgacacgtgtcgtgtccgacaccaagatttgtaattacactgaattatgtaatttt 27932255  T
Q  222 ct 223  Q
    ||    
T  27932254 ct 27932253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 162 - 223
Target Start/End: Original strand, 32630715 - 32630776
Alignment:
Q  162 tgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgattttct 223  Q
    |||| |||||||||||| || |||||||||||||||||||||| |||||||| | |||||||    
T  32630715 tgtcggacacgtgtcgtatccgacactgacacatataattacattgaattatataattttct 32630776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 18421826 - 18421882
Alignment:
Q  167 gacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgattttct 223  Q
    |||| |||||||||| ||| | ||||||||||||||||||| |||||||||||||||    
T  18421826 gacatgtgtcgtgtccgacgccgacacatataattacactggattatgtgattttct 18421882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 121 - 193
Target Start/End: Complemental strand, 21814392 - 21814320
Alignment:
Q  121 actatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacac 193  Q
    ||||||||||||||||| | || |||||||| |||| | |||| ||||||||||||||||| ||||| |||||    
T  21814392 actatgaagcacgaacattccttggataaggcgtgtccccgtgccagacacgtgtcgtgtccgacaccgacac 21814320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 161 - 223
Target Start/End: Original strand, 23012387 - 23012449
Alignment:
Q  161 gtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgattttct 223  Q
    |||||||||| ||||||||||  |||| |||||||||||||||| | |||||| |||||||||    
T  23012387 gtgtcagacatgtgtcgtgtccaacaccgacacatataattacattaaattatatgattttct 23012449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 121 - 191
Target Start/End: Complemental strand, 30098457 - 30098387
Alignment:
Q  121 actatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgac 191  Q
    ||||||||||||| ||| | ||||||| ||| |||| || ||||| ||||||||||||||| |||||||||    
T  30098457 actatgaagcacggacattcctcggattaggtgtgtcctggtgtctgacacgtgtcgtgtccgacactgac 30098387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 189 - 223
Target Start/End: Complemental strand, 39758324 - 39758290
Alignment:
Q  189 gacacatataattacactgaattatgtgattttct 223  Q
    |||||||||||||||||||||||||||||||||||    
T  39758324 gacacatataattacactgaattatgtgattttct 39758290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 189 - 223
Target Start/End: Original strand, 41091264 - 41091298
Alignment:
Q  189 gacacatataattacactgaattatgtgattttct 223  Q
    |||||||||||||||||||||||||||||||||||    
T  41091264 gacacatataattacactgaattatgtgattttct 41091298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 223
Target Start/End: Original strand, 6471897 - 6471930
Alignment:
Q  190 acacatataattacactgaattatgtgattttct 223  Q
    ||||||||||||||||||||||||||||||||||    
T  6471897 acacatataattacactgaattatgtgattttct 6471930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 6770615 - 6770561
Alignment:
Q  167 gacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgattttct 223  Q
    |||| |||||||||| ||||||||||||||  | |||||||||||||||||||||||    
T  6770615 gacatgtgtcgtgtccgacactgacacata--agtacactgaattatgtgattttct 6770561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 221
Target Start/End: Complemental strand, 15884057 - 15884008
Alignment:
Q  172 gtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 221  Q
    |||||||||| ||||| ||||| | |||||||||||||||||||||||||    
T  15884057 gtgtcgtgtccgacaccgacacttgtaattacactgaattatgtgatttt 15884008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 183 - 223
Target Start/End: Complemental strand, 3966561 - 3966521
Alignment:
Q  183 gacactgacacatataattacactgaattatgtgattttct 223  Q
    ||||| ||||||||||||||||||||||| |||||||||||    
T  3966561 gacaccgacacatataattacactgaattgtgtgattttct 3966521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 191 - 223
Target Start/End: Original strand, 24273039 - 24273071
Alignment:
Q  191 cacatataattacactgaattatgtgattttct 223  Q
    |||||||||||||||||||||||||||||||||    
T  24273039 cacatataattacactgaattatgtgattttct 24273071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 191 - 223
Target Start/End: Complemental strand, 24389175 - 24389143
Alignment:
Q  191 cacatataattacactgaattatgtgattttct 223  Q
    |||||||||||||||||||||||||||||||||    
T  24389175 cacatataattacactgaattatgtgattttct 24389143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 223
Target Start/End: Original strand, 16203785 - 16203836
Alignment:
Q  172 gtgtcgtgtctgacactgacacatataattacactgaattatgtgattttct 223  Q
    ||||| |||| ||||| |||||||||||||||||| ||||||| ||||||||    
T  16203785 gtgtcttgtccgacaccgacacatataattacactaaattatgagattttct 16203836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 223
Target Start/End: Original strand, 21194195 - 21194246
Alignment:
Q  172 gtgtcgtgtctgacactgacacatataattacactgaattatgtgattttct 223  Q
    |||||||||| |||||| ||||  || |||||||||||||||||||||||||    
T  21194195 gtgtcgtgtccgacactaacaccaatgattacactgaattatgtgattttct 21194246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 221
Target Start/End: Complemental strand, 6247692 - 6247642
Alignment:
Q  171 cgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 221  Q
    |||| |||||| ||||| ||||| | |||||||||||||||||||||||||    
T  6247692 cgtgccgtgtccgacaccgacacttgtaattacactgaattatgtgatttt 6247642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 223
Target Start/End: Complemental strand, 14873641 - 14873535
Alignment:
Q  122 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtc-----tgacactgacacatataattacactgaattatgtg 216  Q
    |||||||||||| ||||| ||||||| ||| |||| |  ||||  ||||||||| | |||     |||||| |||||||||||||||||| |||||||||    
T  14873641 ctatgaagcacggacactcctcggattaggcgtgtcccggtgttggacacgtgttgcgtccgacatgacaccgacacatataattacactaaattatgtg 14873542  T
Q  217 attttct 223  Q
     ||||||    
T  14873541 cttttct 14873535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 223
Target Start/End: Complemental strand, 17123167 - 17123066
Alignment:
Q  121 actatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgattt 220  Q
    ||||||||||||| ||||| ||||||| ||| |||| | |||||| |||| || |||||||  |||| |||| ||||||||  |||  ||||||||||||    
T  17123167 actatgaagcacggacactcctcggattaggcgtgtcc-cgtgtcggacatgtttcgtgtccaacaccgacatatataattgtacttgattatgtgattt 17123069  T
Q  221 tct 223  Q
    |||    
T  17123068 tct 17123066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 223
Target Start/End: Original strand, 23015996 - 23016030
Alignment:
Q  189 gacacatataattacactgaattatgtgattttct 223  Q
    ||||| |||||||||||||||||||||||||||||    
T  23015996 gacacctataattacactgaattatgtgattttct 23016030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 221
Target Start/End: Complemental strand, 39698599 - 39698561
Alignment:
Q  183 gacactgacacatataattacactgaattatgtgatttt 221  Q
    ||||||||||| | |||||||||||||||||||||||||    
T  39698599 gacactgacacttgtaattacactgaattatgtgatttt 39698561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 223
Target Start/End: Original strand, 12264829 - 12264870
Alignment:
Q  182 tgacactgacacatataattacactgaattatgtgattttct 223  Q
    ||||| ||||||||||||||||||||||| |||| |||||||    
T  12264829 tgacattgacacatataattacactgaatcatgtaattttct 12264870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 122 - 223
Target Start/End: Original strand, 21194063 - 21194164
Alignment:
Q  122 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 221  Q
    |||| ||||||| ||||| ||||||| ||| |||  |  ||||| |||| ||||||||||  ||||  | || |||||||||||||||| ||||||||||    
T  21194063 ctataaagcacggacactcctcggattaggcgtgccccggtgtctgacatgtgtcgtgtccaacaccaatacctataattacactgaatgatgtgatttt 21194162  T
Q  222 ct 223  Q
    ||    
T  21194163 ct 21194164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 181 - 222
Target Start/End: Original strand, 23287348 - 23287389
Alignment:
Q  181 ctgacactgacacatataattacactgaattatgtgattttc 222  Q
    |||||||||||||||||||||| | |||||||||| ||||||    
T  23287348 ctgacactgacacatataattatattgaattatgtcattttc 23287389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 218
Target Start/End: Complemental strand, 4105374 - 4105282
Alignment:
Q  126 gaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgat 218  Q
    |||||||| ||||| ||||||| ||| |||| |  || |||||||| | ||| |||||| ||  |||| | ||||||||||||||||||||||    
T  4105374 gaagcacggacactcctcggattaggcgtgtcccagtatcagacacatatcgagtctgatacctacacttgtaattacactgaattatgtgat 4105282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 189 - 221
Target Start/End: Original strand, 5467985 - 5468017
Alignment:
Q  189 gacacatataattacactgaattatgtgatttt 221  Q
    ||||| |||||||||||||||||||||||||||    
T  5467985 gacacctataattacactgaattatgtgatttt 5468017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 223
Target Start/End: Original strand, 7997108 - 7997207
Alignment:
Q  124 atgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtc-gtgtctgacactgacacatataattacactgaattatgtgattttc 222  Q
    ||||||||| ||||||||||| || ||| |||| ||  |||| |||||| ||| ||||| ||||| ||||| ||||||||||||| ||||| | ||||||    
T  7997108 atgaagcacaaacacttctcgaattaggtgtgtcctgatgtcggacacgcgtcagtgtccgacac-gacacttataattacactgtattatatcattttc 7997206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 223
Target Start/End: Original strand, 17925173 - 17925213
Alignment:
Q  183 gacactgacacatataattacactgaattatgtgattttct 223  Q
    ||||| ||||||||| |||||| ||||||||||||||||||    
T  17925173 gacaccgacacatattattacattgaattatgtgattttct 17925213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 223
Target Start/End: Original strand, 32426870 - 32426910
Alignment:
Q  183 gacactgacacatataattacactgaattatgtgattttct 223  Q
    ||||| |||||| ||||||||| ||||||||||||||||||    
T  32426870 gacaccgacacaaataattacaatgaattatgtgattttct 32426910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 223
Target Start/End: Complemental strand, 36838601 - 36838561
Alignment:
Q  183 gacactgacacatataattacactgaattatgtgattttct 223  Q
    ||||| |||||||||||||||||| |||||||| |||||||    
T  36838601 gacaccgacacatataattacactaaattatgtaattttct 36838561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 223
Target Start/End: Original strand, 41558655 - 41558695
Alignment:
Q  183 gacactgacacatataattacactgaattatgtgattttct 223  Q
    ||||||||||||| |||||||| |||||||||| |||||||    
T  41558655 gacactgacacatttaattacattgaattatgtcattttct 41558695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 213
Target Start/End: Original strand, 42126311 - 42126351
Alignment:
Q  173 tgtcgtgtctgacactgacacatataattacactgaattat 213  Q
    |||||||| ||||||| ||| ||||||||||||||||||||    
T  42126311 tgtcgtgtttgacactaacatatataattacactgaattat 42126351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 54; Significance: 4e-22; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 122 - 223
Target Start/End: Original strand, 18212973 - 18213074
Alignment:
Q  122 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 221  Q
    |||||||||||  ||||| ||||||||||| |||| | ||||||||| | | |||||||| ||||| |||||||||||||||||| ||||||||||||||    
T  18212973 ctatgaagcacagacactcctcggataaggcgtgtccccgtgtcagaaaggggtcgtgtccgacaccgacacatataattacactaaattatgtgatttt 18213072  T
Q  222 ct 223  Q
    ||    
T  18213073 ct 18213074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 122 - 223
Target Start/End: Complemental strand, 21880271 - 21880170
Alignment:
Q  122 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 221  Q
    |||||||||||| ||||||||||||| ||| |||| || ||||| |||| |||||||||| ||||| ||||| | ||||||||||||||||||| |||||    
T  21880271 ctatgaagcacggacacttctcggattaggcgtgtcctggtgtcggacatgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtaatttt 21880172  T
Q  222 ct 223  Q
    ||    
T  21880171 ct 21880170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 122 - 223
Target Start/End: Complemental strand, 598327 - 598226
Alignment:
Q  122 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 221  Q
    |||||||||||| ||||||||||||| ||| |||| |  ||||| ||||||||||||||||||||| ||||| || ||||||| | ||||| ||||||||    
T  598327 ctatgaagcacggacacttctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtctgacaccgacacttacaattacatttaattacgtgatttt 598228  T
Q  222 ct 223  Q
    ||    
T  598227 ct 598226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 121 - 223
Target Start/End: Complemental strand, 5835367 - 5835265
Alignment:
Q  121 actatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgattt 220  Q
    ||||| |||||  |||||||||||||| | | |||| |  || |||||||| |||| |||||||||| ||||||||||||||||||||||||||| ||||    
T  5835367 actataaagcaaaaacacttctcggattaagcgtgtcccggtatcagacacatgtcatgtctgacaccgacacatataattacactgaattatgttattt 5835268  T
Q  221 tct 223  Q
    |||    
T  5835267 tct 5835265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 123 - 220
Target Start/End: Original strand, 18035806 - 18035902
Alignment:
Q  123 tatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgattt 220  Q
    ||||||||||| ||||| ||||||| ||  |||||| ||||||||||| ||||| | ||| |||||||||||| ||||||| ||||||||||||||||    
T  18035806 tatgaagcacggacactcctcggattagacgtgttc-cgtgtcagacatgtgtcctatctcacactgacacatgtaattacgctgaattatgtgattt 18035902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 123 - 223
Target Start/End: Original strand, 32287404 - 32287504
Alignment:
Q  123 tatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgattttc 222  Q
    ||||||||||| ||||| ||||||| ||| |||| |  ||||| ||||| |||| |||| ||||| |||||||||| || ||||||||||||||||||||    
T  32287404 tatgaagcacggacactcctcggattaggtgtgtcccggtgtcggacacttgtcatgtccgacaccgacacatatacttgcactgaattatgtgattttc 32287503  T
Q  223 t 223  Q
    |    
T  32287504 t 32287504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 144 - 223
Target Start/End: Complemental strand, 39138541 - 39138462
Alignment:
Q  144 ggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgattttct 223  Q
    |||||||| |||| | ||||| ||||| || ||||||| ||||| |||| ||||||||||||||||||||||||||||||    
T  39138541 ggataaggcgtgtccccgtgttagacatgtatcgtgtccgacaccgacatatataattacactgaattatgtgattttct 39138462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 142 - 223
Target Start/End: Original strand, 27093373 - 27093454
Alignment:
Q  142 tcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgattttct 223  Q
    |||||| ||| |||| || ||||| ||||| |||||||||| |||| ||| |||||||||||||| ||||||||||||||||    
T  27093373 tcggattaggtgtgtcctagtgtcggacacatgtcgtgtctaacaccgacgcatataattacactaaattatgtgattttct 27093454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 142 - 223
Target Start/End: Complemental strand, 27184928 - 27184847
Alignment:
Q  142 tcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgattttct 223  Q
    |||||| ||| |||| || ||||| ||||| |||||||||| |||| ||| |||||||||||||| ||||||||||||||||    
T  27184928 tcggattaggtgtgtcctagtgtcggacacatgtcgtgtctaacaccgacgcatataattacactaaattatgtgattttct 27184847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 172 - 220
Target Start/End: Complemental strand, 640182 - 640134
Alignment:
Q  172 gtgtcgtgtctgacactgacacatataattacactgaattatgtgattt 220  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  640182 gtgtcgtatctgacaccgacacatataattacactgaattatgtgattt 640134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 161 - 221
Target Start/End: Complemental strand, 15680889 - 15680829
Alignment:
Q  161 gtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 221  Q
    ||||| ||||||||||||||| ||||| ||||| |||||||||||| ||||||||||||||    
T  15680889 gtgtcggacacgtgtcgtgtccgacaccgacacttataattacactaaattatgtgatttt 15680829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 172 - 223
Target Start/End: Complemental strand, 22868111 - 22868060
Alignment:
Q  172 gtgtcgtgtctgacactgacacatataattacactgaattatgtgattttct 223  Q
    |||| |||| ||| ||||||||||||||||||||||||||||||||||||||    
T  22868111 gtgttgtgtttgatactgacacatataattacactgaattatgtgattttct 22868060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 162 - 223
Target Start/End: Complemental strand, 20549870 - 20549809
Alignment:
Q  162 tgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgattttct 223  Q
    |||| |||| |||| ||||| ||||| |||||||||||||||||||||||| ||||||||||    
T  20549870 tgtcggacatgtgttgtgtccgacaccgacacatataattacactgaattacgtgattttct 20549809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 123 - 223
Target Start/End: Complemental strand, 22484143 - 22484043
Alignment:
Q  123 tatgaagcacgaacacttctcggataaggagtgttctcg-tgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 221  Q
    ||||||||||| ||||||||||||| ||   ||| |||| |||| |||| ||||| |||||||||| |||||||||||||| |||||||||||  |||||    
T  22484143 tatgaagcacggacacttctcggatcagacatgt-ctcgatgtcggacatgtgtcatgtctgacaccgacacatataattatactgaattatgcaatttt 22484045  T
Q  222 ct 223  Q
    ||    
T  22484044 ct 22484043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 183 - 223
Target Start/End: Complemental strand, 5548734 - 5548694
Alignment:
Q  183 gacactgacacatataattacactgaattatgtgattttct 223  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  5548734 gacactgacacatataattacactgaattatttgattttct 5548694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 183 - 223
Target Start/End: Original strand, 22602711 - 22602751
Alignment:
Q  183 gacactgacacatataattacactgaattatgtgattttct 223  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  22602711 gacaccgacacatataattacactgaattatgtgattttct 22602751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 23191969 - 23191914
Alignment:
Q  167 gacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgattttct 223  Q
    |||||||| ||||||||||||||| |||| ||||||||||||| |||||||||||||    
T  23191969 gacacgtg-cgtgtctgacactgaaacatgtaattacactgaaatatgtgattttct 23191914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 141 - 221
Target Start/End: Complemental strand, 26733404 - 26733324
Alignment:
Q  141 ctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 221  Q
    ||||||| ||| |||||| ||| || |||| | |||||||| ||||| ||||||| |||||| ||||||||||||||||||    
T  26733404 ctcggattaggcgtgttcccgtatcggacatgcgtcgtgtccgacaccgacacatttaattagactgaattatgtgatttt 26733324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 183 - 223
Target Start/End: Complemental strand, 32308178 - 32308138
Alignment:
Q  183 gacactgacacatataattacactgaattatgtgattttct 223  Q
    |||||||||||||| ||||||||||||||||||||||||||    
T  32308178 gacactgacacatacaattacactgaattatgtgattttct 32308138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 223
Target Start/End: Complemental strand, 9483003 - 9482952
Alignment:
Q  172 gtgtcgtgtctgacactgacacatataattacactgaattatgtgattttct 223  Q
    |||||| ||| ||||| ||||||||||||||||||||||| |||||||||||    
T  9483003 gtgtcgcgtccgacaccgacacatataattacactgaattgtgtgattttct 9482952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 184 - 223
Target Start/End: Complemental strand, 17851488 - 17851449
Alignment:
Q  184 acactgacacatataattacactgaattatgtgattttct 223  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  17851488 acacagacacatataattacactgaattatgtgattttct 17851449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 122 - 221
Target Start/End: Original strand, 42720830 - 42720929
Alignment:
Q  122 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 221  Q
    ||||||||||| ||||||| ||| || ||  ||||||  ||||   |||| ||| ||||| |||||||||||||||||||||| | ||||||||||||||    
T  42720830 ctatgaagcacaaacacttatcgaattagacgtgttccggtgttgtacacatgttgtgtcagacactgacacatataattacatttaattatgtgatttt 42720929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 183 - 221
Target Start/End: Original strand, 18013075 - 18013113
Alignment:
Q  183 gacactgacacatataattacactgaattatgtgatttt 221  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  18013075 gacactgacacatataattacactgaattatgtaatttt 18013113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 121 - 221
Target Start/End: Original strand, 32093953 - 32094059
Alignment:
Q  121 actatgaagcacgaacacttctcggataaggagtgttctc-gtgtcagacacgtgtcgtgtc-----tgacactgacacatataattacactgaattatg 214  Q
    ||||||||||||||||||| ||||||| ||| |||| | | ||||| |||||||||||||||      ||||| ||||  | ||||||||||||||||||    
T  32093953 actatgaagcacgaacactcctcggattaggcgtgtccccggtgtcggacacgtgtcgtgtccgacacgacaccgacatttgtaattacactgaattatg 32094052  T
Q  215 tgatttt 221  Q
    |||||||    
T  32094053 tgatttt 32094059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 221
Target Start/End: Original strand, 5409771 - 5409875
Alignment:
Q  122 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtc-----tgacactgacacatataattacactgaattatgtg 216  Q
    |||||||||||| ||||| ||||||| ||| |||| |  ||||| |||||||||||||||      ||||| ||||| | ||||| ||||||||||||||    
T  5409771 ctatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacacgacaccgacacttgtaattgcactgaattatgtg 5409870  T
Q  217 atttt 221  Q
    |||||    
T  5409871 atttt 5409875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 217
Target Start/End: Complemental strand, 33994331 - 33994236
Alignment:
Q  122 ctatgaagcacgaacacttctcggataaggagtgttctcg-tgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtga 217  Q
    ||||||| |||||||||| || |||| ||| |||| |||| |||  |||| |||||||||||||||| ||||| | ||||| |||||||||||||||    
T  33994331 ctatgaaacacgaacactccttggattaggcgtgt-ctcggtgttggacatgtgtcgtgtctgacaccgacacttgtaattgcactgaattatgtga 33994236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 173 - 223
Target Start/End: Complemental strand, 2424685 - 2424632
Alignment:
Q  173 tgtcgtgtctgacactgacac---atataattacactgaattatgtgattttct 223  Q
    |||||||| ||||||||||||   | ||||||||||||||||||||||||||||    
T  2424685 tgtcgtgtttgacactgacacgatacataattacactgaattatgtgattttct 2424632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 176 - 223
Target Start/End: Complemental strand, 3721158 - 3721111
Alignment:
Q  176 cgtgtctgacactgacacatataattacactgaattatgtgattttct 223  Q
    |||||| ||||| |||||||||||||| ||| ||||||||||||||||    
T  3721158 cgtgtccgacaccgacacatataattatactaaattatgtgattttct 3721111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 223
Target Start/End: Complemental strand, 12278915 - 12278853
Alignment:
Q  161 gtgtcagacacgtgtcg-tgtctgacactgacacatataattacactgaattatgtgattttct 223  Q
    |||||||||||| || | |||| ||||| ||||||||||||||||||||||||||| |||||||    
T  12278915 gtgtcagacacgcgttggtgtccgacac-gacacatataattacactgaattatgtcattttct 12278853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 223
Target Start/End: Complemental strand, 1401093 - 1401043
Alignment:
Q  173 tgtcgtgtctgacactgacacatataattacactgaattatgtgattttct 223  Q
    ||||||||| ||||| || || ||||||||||||||||||||||| |||||    
T  1401093 tgtcgtgtcggacaccgatacttataattacactgaattatgtgagtttct 1401043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 223
Target Start/End: Complemental strand, 4909215 - 4909169
Alignment:
Q  177 gtgtctgacactgacacatataattacactgaattatgtgattttct 223  Q
    ||||| ||||||||||||||| |||||| |||||||||| |||||||    
T  4909215 gtgtccgacactgacacatatgattacaatgaattatgtaattttct 4909169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 223
Target Start/End: Original strand, 27732246 - 27732280
Alignment:
Q  189 gacacatataattacactgaattatgtgattttct 223  Q
    ||||||||||||||||||||||||||| |||||||    
T  27732246 gacacatataattacactgaattatgtaattttct 27732280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 184 - 221
Target Start/End: Complemental strand, 15902879 - 15902842
Alignment:
Q  184 acactgacacatataattacactgaattatgtgatttt 221  Q
    |||| |||||||||||||||||| ||||||||||||||    
T  15902879 acaccgacacatataattacactaaattatgtgatttt 15902842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 223
Target Start/End: Complemental strand, 17307944 - 17307911
Alignment:
Q  190 acacatataattacactgaattatgtgattttct 223  Q
    |||||||||||||||||||||||||| |||||||    
T  17307944 acacatataattacactgaattatgttattttct 17307911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 223
Target Start/End: Complemental strand, 24146879 - 24146834
Alignment:
Q  178 tgtctgacactgacacatataattacactgaattatgtgattttct 223  Q
    |||| ||||| |||||||||||||| | ||||||||||||||||||    
T  24146879 tgtcagacaccgacacatataattatattgaattatgtgattttct 24146834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 122 - 187
Target Start/End: Original strand, 43027404 - 43027469
Alignment:
Q  122 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacac 187  Q
    |||||||||||| |||||  |||||| ||| |||| |  ||||| |||||||||||||||||||||    
T  43027404 ctatgaagcacggacactcatcggattaggcgtgtcccggtgtcggacacgtgtcgtgtctgacac 43027469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 223
Target Start/End: Original strand, 7328692 - 7328732
Alignment:
Q  183 gacactgacacatataattacactgaattatgtgattttct 223  Q
    ||||| |||||||||||||||||| |||||||| |||||||    
T  7328692 gacaccgacacatataattacactaaattatgttattttct 7328732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 191 - 223
Target Start/End: Complemental strand, 16341546 - 16341514
Alignment:
Q  191 cacatataattacactgaattatgtgattttct 223  Q
    |||||||||||||||| ||||||||||||||||    
T  16341546 cacatataattacacttaattatgtgattttct 16341514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 223
Target Start/End: Complemental strand, 19206108 - 19206068
Alignment:
Q  183 gacactgacacatataattacactgaattatgtgattttct 223  Q
    ||||| |||||||||||||| | ||||||||||||||||||    
T  19206108 gacaccgacacatataattataatgaattatgtgattttct 19206068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 223
Target Start/End: Complemental strand, 19992059 - 19992019
Alignment:
Q  183 gacactgacacatataattacactgaattatgtgattttct 223  Q
    ||||| ||||| ||||||||||||||| |||||||||||||    
T  19992059 gacaccgacacttataattacactgaaatatgtgattttct 19992019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 221
Target Start/End: Complemental strand, 21864888 - 21864828
Alignment:
Q  161 gtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 221  Q
    ||||| ||||||||||||||| ||||  ||||| | |||||||||| |||||| |||||||    
T  21864888 gtgtcggacacgtgtcgtgtccgacagcgacacttgtaattacactaaattatatgatttt 21864828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 221
Target Start/End: Complemental strand, 38143287 - 38143243
Alignment:
Q  177 gtgtctgacactgacacatataattacactgaattatgtgatttt 221  Q
    |||||||||||  ||||||||||||||| | ||||||||||||||    
T  38143287 gtgtctgacaccaacacatataattacattaaattatgtgatttt 38143243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 125 - 221
Target Start/End: Complemental strand, 70394 - 70298
Alignment:
Q  125 tgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 221  Q
    |||||||||||||||  |||||| |||  ||| || ||||| ||||||||||||||| ||||| ||||| ||||||||||||||||||||| |||||    
T  70394 tgaagcacgaacactcatcggattaggcatgtcctggtgtcggacacgtgtcgtgtccgacaccgacacttataattacactgaattatgttatttt 70298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 123 - 221
Target Start/End: Original strand, 403 - 501
Alignment:
Q  123 tatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 221  Q
    ||||||||||| ||||| ||||||| ||| |||| |  ||||| |||||| |||||||| ||||| ||||| | ||||||||||||||| |||||||||    
T  403 tatgaagcacggacactcctcggattaggtgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacttgtaattacactgaattttgtgatttt 501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 121 - 223
Target Start/End: Complemental strand, 90963 - 90861
Alignment:
Q  121 actatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgattt 220  Q
    ||||||||||||  |||||  | |||| ||| ||||| | ||||| ||||||||| ||||||||||  |||| |||||||||||||||||||| ||||||    
T  90963 actatgaagcacatacactcattggattaggcgtgttttggtgtcggacacgtgttgtgtctgacatcgacatatataattacactgaattatatgattt 90864  T
Q  221 tct 223  Q
    |||    
T  90863 tct 90861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 161 - 215
Target Start/End: Original strand, 45509 - 45563
Alignment:
Q  161 gtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgt 215  Q
    ||||||||||||||||||||| ||||| ||||| | |||||||||||||||||||    
T  45509 gtgtcagacacgtgtcgtgtccgacaccgacacttgtaattacactgaattatgt 45563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 35; Significance: 0.00000000009; HSPs: 2)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 183 - 221
Target Start/End: Complemental strand, 23569 - 23531
Alignment:
Q  183 gacactgacacatataattacactgaattatgtgatttt 221  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  23569 gacactgacacttataattacactgaattatgtgatttt 23531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 221
Target Start/End: Complemental strand, 23478 - 23440
Alignment:
Q  183 gacactgacacatataattacactgaattatgtgatttt 221  Q
    ||||| ||||| |||||||||||||||||||||||||||    
T  23478 gacaccgacacttataattacactgaattatgtgatttt 23440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 189 - 223
Target Start/End: Original strand, 44532 - 44566
Alignment:
Q  189 gacacatataattacactgaattatgtgattttct 223  Q
    |||||||||||||||||||||||||||||||||||    
T  44532 gacacatataattacactgaattatgtgattttct 44566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 122 - 187
Target Start/End: Complemental strand, 241724 - 241659
Alignment:
Q  122 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacac 187  Q
    |||||||||||| ||||||||||||| ||| |||| |  ||||| ||||||||||||||| |||||    
T  241724 ctatgaagcacggacacttctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacac 241659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 221
Target Start/End: Complemental strand, 348166 - 348122
Alignment:
Q  177 gtgtctgacactgacacatataattacactgaattatgtgatttt 221  Q
    |||| |||||| ||||| |||||||||||| ||||||||||||||    
T  348166 gtgtttgacacagacacctataattacacttaattatgtgatttt 348122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0279 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0279
Description:

Target: scaffold0279; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 17844 - 17788
Alignment:
Q  167 gacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgattttct 223  Q
    ||||| ||||||||||||||| |||||||| |||||||| || || |||||||||||    
T  17844 gacacatgtcgtgtctgacaccgacacatacaattacaccgagttgtgtgattttct 17788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 183 - 223
Target Start/End: Original strand, 9748 - 9788
Alignment:
Q  183 gacactgacacatataattacactgaattatgtgattttct 223  Q
    ||||| |||||||||||||||||||||||| ||||||||||    
T  9748 gacaccgacacatataattacactgaattaagtgattttct 9788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 183 - 223
Target Start/End: Original strand, 135313 - 135353
Alignment:
Q  183 gacactgacacatataattacactgaattatgtgattttct 223  Q
    ||||| ||||||||||||||||| |||||||||||||||||    
T  135313 gacaccgacacatataattacacagaattatgtgattttct 135353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 183 - 223
Target Start/End: Original strand, 263373 - 263413
Alignment:
Q  183 gacactgacacatataattacactgaattatgtgattttct 223  Q
    ||||||||||| |||||||||||||||||||||| ||||||    
T  263373 gacactgacacttataattacactgaattatgtggttttct 263413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 221
Target Start/End: Complemental strand, 14607 - 14550
Alignment:
Q  161 gtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 221  Q
    ||||| ||||||||||||||| |||||   ||| | |||||||||||||||||||||||||    
T  14607 gtgtcggacacgtgtcgtgtccgacac---cacttgtaattacactgaattatgtgatttt 14550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 223
Target Start/End: Complemental strand, 13523 - 13418
Alignment:
Q  124 atgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgaca------catataattacactgaattatgtga 217  Q
    |||||||||| ||||| || |||| ||| |||| || ||||||||| ||||||||||| ||||| ||||      | | ||||| |||||||||||||||    
T  13523 atgaagcacggacactccttggattaggtgtgtcctagtgtcagacgcgtgtcgtgtccgacaccgacaccgacccttgtaattgcactgaattatgtga 13424  T
Q  218 ttttct 223  Q
    ||||||    
T  13423 ttttct 13418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 221
Target Start/End: Complemental strand, 20230 - 20192
Alignment:
Q  183 gacactgacacatataattacactgaattatgtgatttt 221  Q
    ||||||||||| | |||||||||||||||||||||||||    
T  20230 gacactgacacttgtaattacactgaattatgtgatttt 20192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 223
Target Start/End: Original strand, 21804 - 21909
Alignment:
Q  124 atgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgaca------catataattacactgaattatgtga 217  Q
    |||||||||| ||||| || |||| ||| |||| || ||||||||| ||||||||||| ||||| ||||      | | ||||| |||||||||||||||    
T  21804 atgaagcacggacactccttggattaggtgtgtcctagtgtcagacgcgtgtcgtgtccgacaccgacaccgacccttgtaattgcactgaattatgtga 21903  T
Q  218 ttttct 223  Q
    ||||||    
T  21904 ttttct 21909  T

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Target: scaffold0136 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 221
Target Start/End: Original strand, 3850 - 3888
Alignment:
Q  183 gacactgacacatataattacactgaattatgtgatttt 221  Q
    ||||||||||| | |||||||||||||||||||||||||    
T  3850 gacactgacacttgtaattacactgaattatgtgatttt 3888  T

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Target: scaffold0044 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 223
Target Start/End: Complemental strand, 53232 - 53198
Alignment:
Q  189 gacacatataattacactgaattatgtgattttct 223  Q
    ||||| |||||||||||||||||||||||||||||    
T  53232 gacacttataattacactgaattatgtgattttct 53198  T

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Target: scaffold1528 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold1528
Description:

Target: scaffold1528; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 184 - 221
Target Start/End: Complemental strand, 1092 - 1055
Alignment:
Q  184 acactgacacatataattacactgaattatgtgatttt 221  Q
    ||||||||||||||| |||||||||||||||| |||||    
T  1092 acactgacacatatagttacactgaattatgtaatttt 1055  T

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Target: scaffold0475 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 122 - 211
Target Start/End: Complemental strand, 3427 - 3338
Alignment:
Q  122 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaatt 211  Q
    |||||||||||| ||||| ||||||| ||| |||| |  |||||   |||||||| |||| ||||||||||| | |||||||||| ||||    
T  3427 ctatgaagcacggacactcctcggattaggcgtgtcccagtgtccaccacgtgtcttgtccgacactgacacttgtaattacacttaatt 3338  T

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Target: scaffold0623 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 223
Target Start/End: Original strand, 5997 - 6037
Alignment:
Q  183 gacactgacacatataattacactgaattatgtgattttct 223  Q
    ||||| ||||||||||||||||||| ||| |||||||||||    
T  5997 gacaccgacacatataattacactgcattttgtgattttct 6037  T

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Target: scaffold0236 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 223
Target Start/End: Original strand, 25769 - 25809
Alignment:
Q  183 gacactgacacatataattacactgaattatgtgattttct 223  Q
    ||||| ||||| |||||||||||| ||||||||||||||||    
T  25769 gacaccgacacttataattacactaaattatgtgattttct 25809  T

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Target: scaffold0053 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 221
Target Start/End: Complemental strand, 8878 - 8818
Alignment:
Q  161 gtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 221  Q
    ||||| ||||||||||||||| ||||| ||||| | |||||||||| ||| || |||||||    
T  8878 gtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactaaataatatgatttt 8818  T

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