View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1126_low_220 (Length: 213)

Name: NF1126_low_220
Description: NF1126
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1126_low_220
NF1126_low_220
[»] chr3 (16 HSPs)
chr3 (1-201)||(14548761-14548961)
chr3 (6-63)||(2318612-2318669)
chr3 (13-63)||(43116480-43116530)
chr3 (1-44)||(48807695-48807738)
chr3 (13-45)||(41057024-41057056)
chr3 (2-45)||(21865562-21865605)
chr3 (9-44)||(45590651-45590686)
chr3 (9-63)||(52440710-52440764)
chr3 (9-38)||(2100203-2100232)
chr3 (3-44)||(21872313-21872354)
chr3 (11-44)||(32109360-32109393)
chr3 (3-44)||(32555023-32555064)
chr3 (13-45)||(22214711-22214743)
chr3 (13-45)||(33405219-33405251)
chr3 (10-42)||(39228493-39228525)
chr3 (13-41)||(43875638-43875666)
[»] chr5 (28 HSPs)
chr5 (1-201)||(37588400-37588606)
chr5 (1-201)||(37690676-37690883)
chr5 (1-201)||(37526239-37526444)
chr5 (48-201)||(37611285-37611442)
chr5 (48-201)||(37788015-37788172)
chr5 (5-45)||(36539732-36539772)
chr5 (19-140)||(18852897-18853023)
chr5 (17-63)||(40120088-40120134)
chr5 (63-142)||(20982244-20982326)
chr5 (8-43)||(9703287-9703322)
chr5 (13-64)||(12975314-12975365)
chr5 (9-64)||(13604897-13604952)
chr5 (9-64)||(21768245-21768300)
chr5 (13-63)||(10272483-10272533)
chr5 (1-63)||(14295474-14295536)
chr5 (9-43)||(14961920-14961954)
chr5 (11-45)||(19177465-19177499)
chr5 (14-60)||(29054879-29054925)
chr5 (8-45)||(19138766-19138803)
chr5 (14-63)||(32059642-32059691)
chr5 (13-45)||(6587159-6587191)
chr5 (9-45)||(9202796-9202832)
chr5 (1-45)||(18543236-18543280)
chr5 (8-44)||(18704083-18704119)
chr5 (1-45)||(26390830-26390874)
chr5 (17-45)||(41016165-41016193)
chr5 (12-44)||(41017714-41017746)
chr5 (9-45)||(42181140-42181176)
[»] chr8 (15 HSPs)
chr8 (1-63)||(12361160-12361222)
chr8 (3-63)||(35869805-35869865)
chr8 (13-45)||(9834841-9834873)
chr8 (4-44)||(12132820-12132860)
chr8 (13-138)||(31884477-31884612)
chr8 (1-63)||(34551088-34551150)
chr8 (13-63)||(34770860-34770910)
chr8 (13-92)||(2091698-2091779)
chr8 (1-49)||(1117327-1117374)
chr8 (13-45)||(7645964-7645996)
chr8 (1-45)||(13652201-13652245)
chr8 (1-45)||(13710844-13710888)
chr8 (17-45)||(16210942-16210970)
chr8 (1-45)||(40157498-40157542)
chr8 (13-45)||(43704430-43704462)
[»] chr7 (10 HSPs)
chr7 (6-44)||(25507336-25507374)
chr7 (1-44)||(24909651-24909694)
chr7 (9-44)||(25558239-25558274)
chr7 (9-44)||(25558437-25558472)
chr7 (1-44)||(24895343-24895386)
chr7 (13-63)||(1417232-1417282)
chr7 (1-63)||(33709416-33709478)
chr7 (1-43)||(39505944-39505986)
chr7 (17-51)||(46104668-46104702)
chr7 (13-45)||(9527142-9527174)
[»] chr2 (21 HSPs)
chr2 (58-140)||(18884762-18884847)
chr2 (1-62)||(39983311-39983372)
chr2 (1-45)||(37276732-37276776)
chr2 (1-45)||(40158704-40158748)
chr2 (12-63)||(23143029-23143080)
chr2 (12-63)||(23554819-23554870)
chr2 (13-63)||(11513866-11513916)
chr2 (1-38)||(42621415-42621452)
chr2 (9-45)||(35755550-35755586)
chr2 (1-44)||(13869135-13869178)
chr2 (13-63)||(5043612-5043662)
chr2 (13-63)||(33942118-33942168)
chr2 (64-140)||(11393476-11393555)
chr2 (64-140)||(11410137-11410216)
chr2 (5-45)||(9395116-9395156)
chr2 (3-43)||(9886300-9886340)
chr2 (5-45)||(15377751-15377791)
chr2 (13-45)||(15780063-15780095)
chr2 (13-45)||(18066114-18066146)
chr2 (13-45)||(25800815-25800847)
chr2 (13-45)||(42592325-42592357)
[»] chr1 (22 HSPs)
chr1 (9-55)||(15515517-15515563)
chr1 (1-45)||(25005837-25005881)
chr1 (13-63)||(30371116-30371166)
chr1 (1-62)||(7218114-7218175)
chr1 (13-62)||(25006086-25006135)
chr1 (13-45)||(12564926-12564958)
chr1 (1-45)||(17269236-17269280)
chr1 (1-45)||(37272626-37272670)
chr1 (1-44)||(15361700-15361743)
chr1 (5-63)||(4019637-4019694)
chr1 (13-63)||(27738232-27738282)
chr1 (15-45)||(28689508-28689538)
chr1 (1-39)||(51957423-51957461)
chr1 (13-41)||(5592737-5592765)
chr1 (13-45)||(8130422-8130454)
chr1 (8-44)||(10581124-10581160)
chr1 (15-43)||(17422992-17423020)
chr1 (11-63)||(21516341-21516393)
chr1 (14-66)||(27887171-27887223)
chr1 (16-44)||(29007771-29007799)
chr1 (13-41)||(29045964-29045992)
chr1 (9-45)||(33527195-33527231)
[»] chr4 (25 HSPs)
chr4 (3-63)||(24444006-24444066)
chr4 (1-44)||(8468935-8468978)
chr4 (13-64)||(30207623-30207673)
chr4 (13-63)||(53626744-53626794)
chr4 (8-52)||(29373934-29373978)
chr4 (14-44)||(11842202-11842232)
chr4 (1-63)||(13949884-13949946)
chr4 (9-63)||(32920448-32920502)
chr4 (14-44)||(49219126-49219156)
chr4 (1-38)||(7694050-7694087)
chr4 (3-44)||(9841053-9841094)
chr4 (3-44)||(24091450-24091491)
chr4 (14-63)||(45128363-45128412)
chr4 (17-45)||(8422895-8422923)
chr4 (1-45)||(10192270-10192314)
chr4 (58-102)||(11785204-11785248)
chr4 (17-45)||(18630666-18630694)
chr4 (19-63)||(25434518-25434562)
chr4 (9-45)||(25885845-25885881)
chr4 (13-45)||(29778781-29778813)
chr4 (13-45)||(36460572-36460604)
chr4 (9-45)||(36722717-36722753)
chr4 (8-83)||(36823946-36824021)
chr4 (13-45)||(42866054-42866086)
chr4 (13-45)||(55870393-55870425)
[»] scaffold0508 (1 HSPs)
scaffold0508 (14-100)||(9828-9921)
[»] scaffold0053 (1 HSPs)
scaffold0053 (8-63)||(20147-20202)
[»] scaffold0024 (1 HSPs)
scaffold0024 (14-100)||(27500-27593)
[»] chr6 (13 HSPs)
chr6 (1-45)||(1275135-1275179)
chr6 (9-45)||(8035196-8035232)
chr6 (9-44)||(2117390-2117425)
chr6 (13-44)||(7485120-7485151)
chr6 (13-63)||(4006682-4006732)
chr6 (59-105)||(4325413-4325459)
chr6 (13-51)||(5623136-5623174)
chr6 (13-63)||(10150304-10150354)
chr6 (14-63)||(10452413-10452462)
chr6 (1-45)||(4246396-4246440)
chr6 (3-63)||(22742334-22742394)
chr6 (1-45)||(32386603-32386647)
chr6 (16-44)||(32917205-32917233)
[»] scaffold0092 (1 HSPs)
scaffold0092 (9-45)||(40217-40253)
[»] scaffold0044 (1 HSPs)
scaffold0044 (9-45)||(51998-52034)


Alignment Details
Target: chr3 (Bit Score: 185; Significance: 1e-100; HSPs: 16)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 14548761 - 14548961
Alignment:
Q  1 tctccagaataacttatgaaaacaacttatagcttatatgaaaactttttgatttgattttattatagaaataacttttacattagcacttaaatgataa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14548761 tctccagaataacttatgaaaacaacttatagcttatatgaaaactttttgatttgattttattatagaaataacttttacattagcacttaaatgataa 14548860  T
Q  101 acacatctataagtgcttgatgaagttgtttatccaaacaggcttataaatattgtatatttgatttcttcttttgtctacggctccttcgtttgatcct 200  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| |||||||| |||||||||    
T  14548861 acacatctataagtgcttgatgaagttgtttatccaaacaagcttataaatattgtatatttgatttcttgttttgtctactgctccttcatttgatcct 14548960  T
Q  201 c 201  Q
    |    
T  14548961 c 14548961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 6 - 63
Target Start/End: Complemental strand, 2318669 - 2318612
Alignment:
Q  6 agaataacttatgaaaacaacttatagcttatatgaaaactttttgatttgattttat 63  Q
    |||||||||||| |||||||||||||| ||||||||||||  ||||||||||||||||    
T  2318669 agaataacttataaaaacaacttatagtttatatgaaaacaatttgatttgattttat 2318612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 63
Target Start/End: Original strand, 43116480 - 43116530
Alignment:
Q  13 cttatgaaaacaacttatagcttatatgaaaactttttgatttgattttat 63  Q
    ||||||||||| |||||||||||||||||||| | ||||||||||||||||    
T  43116480 cttatgaaaacgacttatagcttatatgaaaattgtttgatttgattttat 43116530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 48807738 - 48807695
Alignment:
Q  1 tctccagaataacttatgaaaacaacttatagcttatatgaaaa 44  Q
    |||| |||||||||||||||||||||||||||||| ||||||||    
T  48807738 tctctagaataacttatgaaaacaacttatagcttctatgaaaa 48807695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 45
Target Start/End: Complemental strand, 41057056 - 41057024
Alignment:
Q  13 cttatgaaaacaacttatagcttatatgaaaac 45  Q
    |||||||||||||||||||||||||||||||||    
T  41057056 cttatgaaaacaacttatagcttatatgaaaac 41057024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 45
Target Start/End: Complemental strand, 21865605 - 21865562
Alignment:
Q  2 ctccagaataacttatgaaaacaacttatagcttatatgaaaac 45  Q
    ||||| |||| ||||| |||||||||||||||||||||||||||    
T  21865605 ctccaaaatagcttatcaaaacaacttatagcttatatgaaaac 21865562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 44
Target Start/End: Complemental strand, 45590686 - 45590651
Alignment:
Q  9 ataacttatgaaaacaacttatagcttatatgaaaa 44  Q
    ||||||||||||||||||||||| ||||||||||||    
T  45590686 ataacttatgaaaacaacttatatcttatatgaaaa 45590651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 63
Target Start/End: Original strand, 52440710 - 52440764
Alignment:
Q  9 ataacttatgaaaacaacttatagcttatatgaaaactttttgatttgattttat 63  Q
    |||| ||||||||| | |||||||||||| |||||||  ||||||||||||||||    
T  52440710 ataaattatgaaaatagcttatagcttatttgaaaacaatttgatttgattttat 52440764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 38
Target Start/End: Original strand, 2100203 - 2100232
Alignment:
Q  9 ataacttatgaaaacaacttatagcttata 38  Q
    ||||||||||||||||||||||||||||||    
T  2100203 ataacttatgaaaacaacttatagcttata 2100232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 44
Target Start/End: Original strand, 21872313 - 21872354
Alignment:
Q  3 tccagaataacttatgaaaacaacttatagcttatatgaaaa 44  Q
    ||||| ||| ||||||||||||||||||||||||||| ||||    
T  21872313 tccaggatagcttatgaaaacaacttatagcttatatcaaaa 21872354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 11 - 44
Target Start/End: Original strand, 32109360 - 32109393
Alignment:
Q  11 aacttatgaaaacaacttatagcttatatgaaaa 44  Q
    ||||||||||||||||||||||||| ||||||||    
T  32109360 aacttatgaaaacaacttatagcttgtatgaaaa 32109393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 44
Target Start/End: Original strand, 32555023 - 32555064
Alignment:
Q  3 tccagaataacttatgaaaacaacttatagcttatatgaaaa 44  Q
    ||||| |||||| ||||||||||||||||||||||| |||||    
T  32555023 tccaggataactcatgaaaacaacttatagcttataggaaaa 32555064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 45
Target Start/End: Original strand, 22214711 - 22214743
Alignment:
Q  13 cttatgaaaacaacttatagcttatatgaaaac 45  Q
    |||||||||||||||||||| ||||||||||||    
T  22214711 cttatgaaaacaacttataggttatatgaaaac 22214743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 45
Target Start/End: Original strand, 33405219 - 33405251
Alignment:
Q  13 cttatgaaaacaacttatagcttatatgaaaac 45  Q
    |||||||||||| ||||||||||||||||||||    
T  33405219 cttatgaaaacagcttatagcttatatgaaaac 33405251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 42
Target Start/End: Complemental strand, 39228525 - 39228493
Alignment:
Q  10 taacttatgaaaacaacttatagcttatatgaa 42  Q
    ||||||| |||||||||||||||||||||||||    
T  39228525 taacttacgaaaacaacttatagcttatatgaa 39228493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 41
Target Start/End: Complemental strand, 43875666 - 43875638
Alignment:
Q  13 cttatgaaaacaacttatagcttatatga 41  Q
    |||||||||||||||||||||||||||||    
T  43875666 cttatgaaaacaacttatagcttatatga 43875638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 150; Significance: 2e-79; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 37588400 - 37588606
Alignment:
Q  1 tctccagaataacttatgaaaacaacttatagcttatatgaaaactttttgatttgattttat-------tatagaaataacttttacattagcacttaa 93  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||| ||| |||||||||    
T  37588400 tctccagaataacttatgaaaacaacttatagcttatatgaaaactttttgatttgattttatcttttattatagaaataacttttgcat-agcacttaa 37588498  T
Q  94 atgataaacacatctataagtgcttgatgaagttgtttatccaaacaggcttataaatattgtatatttgatttcttcttttgtctacggctccttcgtt 193  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||| |||||||| ||    
T  37588499 atgataaacacatctataagtgcttgatgaagttgtttatccaaacatgcttataaatattgtatgtttgatttcttgttttgtctactgctccttcatt 37588598  T
Q  194 tgatcctc 201  Q
    ||||||||    
T  37588599 tgatcctc 37588606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 139; E-Value: 6e-73
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 37690676 - 37690883
Alignment:
Q  1 tctccagaataactt-atgaaaacaacttatagcttatatgaaaactttttgatttgattttat-------tatagaaataacttttacattagcactta 92  Q
    |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||| ||||||||    
T  37690676 tctccataataactttatgaaaacaacttatagcttatatgaaaactttttgatttgattttatcttttattatagaaataacttttacat-agcactta 37690774  T
Q  93 aatgataaacacatctataagtgcttgatgaagttgtttatccaaacaggcttataaatattgtatatttgatttcttcttttgtctacggctccttcgt 192  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||| |||||||| |    
T  37690775 aatgataaacacatctacaagtgcttgatgaagttgtttatccaaacatgcttataaatattgtatgtttgatttcttgttttgtctactgctccttcat 37690874  T
Q  193 ttgatcctc 201  Q
    |||||||||    
T  37690875 ttgatcctc 37690883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 134; E-Value: 6e-70
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 37526239 - 37526444
Alignment:
Q  1 tctccagaataacttatgaaaacaacttatagcttatatgaaaactttttgatttgattttat-------tatagaaataacttttacattagcacttaa 93  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||| || |||||||||    
T  37526239 tctccagaacaacttatgaaaacaacttatagcttatatgaaaactttttgatttgattttatcttttattatagaaataacttttagat-agcacttaa 37526337  T
Q  94 atgataaacacatctataagtgcttgatgaagttgtttatccaaacaggcttataaatattgtatatttgatttcttcttttgtctacggctccttcgtt 193  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||| |||||||| ||    
T  37526338 atgataaacacat-tataagtgcttgatgaatttgtttatccaaacatgcttataaatattgtatgtttgatttcttgttttgtctactgctccttcatt 37526436  T
Q  194 tgatcctc 201  Q
    ||||||||    
T  37526437 tgatcctc 37526444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 48 - 201
Target Start/End: Original strand, 37611285 - 37611442
Alignment:
Q  48 tttgatttgattttattatagaaataacttttacattagcacttaaatgataaacacat---ctataagtgcttgatgaagttgtttatccaaaca-ggc 143  Q
    ||||||||  |||||||||||||||| ||||||||| |||||||| |||| || ||  |   |||||||||||| || || |||||||  |||||| |||    
T  37611285 tttgattttcttttattatagaaatagcttttacataagcacttatatgacaaccatttatgctataagtgcttaattaaattgtttacacaaacagggc 37611384  T
Q  144 ttataaatattgtatatttgatttcttcttttgtctacggctccttcgtttgatcctc 201  Q
    |||||| ||||||||  |||||||||| ||| ||| ||   |||||| ||||||||||    
T  37611385 ttataactattgtatgcttgatttcttgtttggtcaacctatccttcctttgatcctc 37611442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 48 - 201
Target Start/End: Original strand, 37788015 - 37788172
Alignment:
Q  48 tttgatttgattttattatagaaataacttttacattagcacttaaatgataaacacat---ctataagtgcttgatgaagttgtttatccaaaca-ggc 143  Q
    ||||||||  |||||||||||||||| ||||||||| |||||||| |||| || ||  |   |||||||||||| || || |||||||  |||||| |||    
T  37788015 tttgattttcttttattatagaaatagcttttacataagcacttatatgacaaccatttatgctataagtgcttaattaaattgtttacacaaacagggc 37788114  T
Q  144 ttataaatattgtatatttgatttcttcttttgtctacggctccttcgtttgatcctc 201  Q
    |||||| ||||||||  |||||||||| ||| ||| ||   |||||| ||||||||||    
T  37788115 ttataactattgtatgcttgatttcttgtttggtcaacctatccttcctttgatcctc 37788172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 36539772 - 36539732
Alignment:
Q  5 cagaataacttatgaaaacaacttatagcttatatgaaaac 45  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  36539772 cagaataacttataaaaacaacttatagcttatatgaaaac 36539732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 19 - 140
Target Start/End: Complemental strand, 18853023 - 18852897
Alignment:
Q  19 aaaacaacttatagcttatatgaaaactttttgatttgat-----tttattatagaaataacttttacattagcacttaaatgataaacacatctataag 113  Q
    |||||| |||||||||||||| |||||| |||||||||||     |||  |||| ||||| ||| ||||| |||||||| | ||||||| | | | ||||    
T  18853023 aaaacatcttatagcttatataaaaactatttgatttgatttatctttgctatataaatagcttatacataagcacttacacgataaacccttatgtaag 18852924  T
Q  114 tgcttgatgaagttgtttatccaaaca 140  Q
     |||| || ||||||||||||||||||    
T  18852923 cgcttaattaagttgtttatccaaaca 18852897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 17 - 63
Target Start/End: Complemental strand, 40120134 - 40120088
Alignment:
Q  17 tgaaaacaacttatagcttatatgaaaactttttgatttgattttat 63  Q
    |||||||||| ||||||||||||||||||  ||||||||||||||||    
T  40120134 tgaaaacaacctatagcttatatgaaaacaatttgatttgattttat 40120088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 142
Target Start/End: Original strand, 20982244 - 20982326
Alignment:
Q  63 ttatagaaataacttttacattagcacttaaatgataaacacat---ctataagtgcttgatgaagttgtttatccaaacagg 142  Q
    ||||||||||| ||| ||||| |||||||| ||||||| ||| |   |||||||  ||| |||||||||||||||||||||||    
T  20982244 ttatagaaatagcttatacataagcacttatatgataagcacttatgctataagcacttaatgaagttgtttatccaaacagg 20982326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 43
Target Start/End: Original strand, 9703287 - 9703322
Alignment:
Q  8 aataacttatgaaaacaacttatagcttatatgaaa 43  Q
    ||||||||||||||||||||| ||||||||||||||    
T  9703287 aataacttatgaaaacaacttgtagcttatatgaaa 9703322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 64
Target Start/End: Complemental strand, 12975365 - 12975314
Alignment:
Q  13 cttatgaaaacaacttatagcttatatgaaaactttttgatttgattttatt 64  Q
    |||||||| ||| ||||||||||||||||||||  |||||||| ||||||||    
T  12975365 cttatgaacacagcttatagcttatatgaaaacaatttgattttattttatt 12975314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 64
Target Start/End: Original strand, 13604897 - 13604952
Alignment:
Q  9 ataacttatgaaaacaacttatagcttatatgaaaactttttgatttgattttatt 64  Q
    |||||||||||||||| |||| || |||||||||||| || |||||| ||||||||    
T  13604897 ataacttatgaaaacagcttaaagtttatatgaaaacattatgatttaattttatt 13604952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 64
Target Start/End: Original strand, 21768245 - 21768300
Alignment:
Q  9 ataacttatgaaaacaacttatagcttatatgaaaactttttgatttgattttatt 64  Q
    |||||||||||||||| |||| || |||||||||||| || |||||| ||||||||    
T  21768245 ataacttatgaaaacagcttaaagtttatatgaaaacattatgatttaattttatt 21768300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 63
Target Start/End: Original strand, 10272483 - 10272533
Alignment:
Q  13 cttatgaaaacaacttatagcttatatgaaaactttttgatttgattttat 63  Q
    |||||||||||||||||||||||||| ||||||  ||||| || |||||||    
T  10272483 cttatgaaaacaacttatagcttatacgaaaacaatttgacttaattttat 10272533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 14295536 - 14295474
Alignment:
Q  1 tctccagaataacttatgaaaacaacttatagcttatatgaaaactttttgatttgattttat 63  Q
    ||||||| ||| |||| ||||||| ||||||||||||||||||||  ||||| || |||||||    
T  14295536 tctccaggatagcttacgaaaacagcttatagcttatatgaaaacagtttgactttattttat 14295474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 43
Target Start/End: Complemental strand, 14961954 - 14961920
Alignment:
Q  9 ataacttatgaaaacaacttatagcttatatgaaa 43  Q
    |||||||||||||||||||||||| ||||||||||    
T  14961954 ataacttatgaaaacaacttatagtttatatgaaa 14961920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 45
Target Start/End: Complemental strand, 19177499 - 19177465
Alignment:
Q  11 aacttatgaaaacaacttatagcttatatgaaaac 45  Q
    |||||| ||||||||||||||||||||||||||||    
T  19177499 aacttacgaaaacaacttatagcttatatgaaaac 19177465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 60
Target Start/End: Complemental strand, 29054925 - 29054879
Alignment:
Q  14 ttatgaaaacaacttatagcttatatgaaaactttttgatttgattt 60  Q
    ||||| |||||||||||||||||||||||| |  |||||||||||||    
T  29054925 ttatggaaacaacttatagcttatatgaaagcaatttgatttgattt 29054879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 8 - 45
Target Start/End: Original strand, 19138766 - 19138803
Alignment:
Q  8 aataacttatgaaaacaacttatagcttatatgaaaac 45  Q
    |||| ||||||||||||||||||||||||| |||||||    
T  19138766 aatagcttatgaaaacaacttatagcttatctgaaaac 19138803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 14 - 63
Target Start/End: Original strand, 32059642 - 32059691
Alignment:
Q  14 ttatgaaaacaacttatagcttatatgaaaactttttgatttgattttat 63  Q
    ||||||||||| ||||||||||||||||||||  ||||| || |||||||    
T  32059642 ttatgaaaacagcttatagcttatatgaaaacagtttgactttattttat 32059691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 45
Target Start/End: Original strand, 6587159 - 6587191
Alignment:
Q  13 cttatgaaaacaacttatagcttatatgaaaac 45  Q
    |||||||||||||||||||||||||| ||||||    
T  6587159 cttatgaaaacaacttatagcttatacgaaaac 6587191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 45
Target Start/End: Original strand, 9202796 - 9202832
Alignment:
Q  9 ataacttatgaaaacaacttatagcttatatgaaaac 45  Q
    |||||||||||||||| ||||| ||||||||||||||    
T  9202796 ataacttatgaaaacagcttattgcttatatgaaaac 9202832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 18543236 - 18543280
Alignment:
Q  1 tctccagaataacttatgaaaacaacttatagcttatatgaaaac 45  Q
    ||||||| ||| ||||||||||||||||||| ||||||| |||||    
T  18543236 tctccaggatagcttatgaaaacaacttatatcttatataaaaac 18543280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 44
Target Start/End: Original strand, 18704083 - 18704119
Alignment:
Q  8 aataacttatgaaaacaacttatagcttatatgaaaa 44  Q
    |||| ||||||||||||||||||||||||||| ||||    
T  18704083 aatagcttatgaaaacaacttatagcttatataaaaa 18704119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 26390830 - 26390874
Alignment:
Q  1 tctccagaataacttatgaaaacaacttatagcttatatgaaaac 45  Q
    ||||||| |||||||| |||| || ||||||||||||||||||||    
T  26390830 tctccaggataacttaggaaaccatcttatagcttatatgaaaac 26390874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 45
Target Start/End: Complemental strand, 41016193 - 41016165
Alignment:
Q  17 tgaaaacaacttatagcttatatgaaaac 45  Q
    |||||||||||||||||||||||||||||    
T  41016193 tgaaaacaacttatagcttatatgaaaac 41016165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 44
Target Start/End: Complemental strand, 41017746 - 41017714
Alignment:
Q  12 acttatgaaaacaacttatagcttatatgaaaa 44  Q
    ||||||||||||||||||||||||||| |||||    
T  41017746 acttatgaaaacaacttatagcttataggaaaa 41017714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 45
Target Start/End: Original strand, 42181140 - 42181176
Alignment:
Q  9 ataacttatgaaaacaacttatagcttatatgaaaac 45  Q
    ||||||| || ||||||||||||||||||||||||||    
T  42181140 ataacttgtgcaaacaacttatagcttatatgaaaac 42181176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 15)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 12361222 - 12361160
Alignment:
Q  1 tctccagaataacttatgaaaacaacttatagcttatatgaaaactttttgatttgattttat 63  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||  ||||| || |||||||    
T  12361222 tctcctgaataacttatgaaaacagcttatagcttatatgaaaacaatttgacttcattttat 12361160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 35869865 - 35869805
Alignment:
Q  3 tccagaataacttatgaaaacaacttatagcttatatgaaaactttttgatttgattttat 63  Q
    |||| |||| |||||||||||||||||||||||||||||||| | ||||| || |||||||    
T  35869865 tccacaatagcttatgaaaacaacttatagcttatatgaaaattgtttgaatttattttat 35869805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 45
Target Start/End: Original strand, 9834841 - 9834873
Alignment:
Q  13 cttatgaaaacaacttatagcttatatgaaaac 45  Q
    |||||||||||||||||||||||||||||||||    
T  9834841 cttatgaaaacaacttatagcttatatgaaaac 9834873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 12132860 - 12132820
Alignment:
Q  4 ccagaataacttatgaaaacaacttatagcttatatgaaaa 44  Q
    |||| |||||||||||||||| |||||||||||||||||||    
T  12132860 ccaggataacttatgaaaacagcttatagcttatatgaaaa 12132820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 138
Target Start/End: Complemental strand, 31884612 - 31884477
Alignment:
Q  13 cttatgaaaacaacttatagcttatatgaaaactttttgatttgatttta-------ttatagaaataacttttacattagcacttaaatgataaacaca 105  Q
    ||||||||||||| |||||||||||||||||||  ||  |||||||||||       ||||||||||||||| |||||  ||||||  ||||||| | |     
T  31884612 cttatgaaaacaatttatagcttatatgaaaacaattcaatttgattttatattttgttatagaaataacttatacatatgcacttgtatgataagcgct 31884513  T
Q  106 t---ctataagtgcttgatgaagttgtttatccaaa 138  Q
    |   |||||||||||| ||  |||||||||||||||    
T  31884512 tatgctataagtgcttaattgagttgtttatccaaa 31884477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 34551150 - 34551088
Alignment:
Q  1 tctccagaataacttatgaaaacaacttatagcttatatgaaaactttttgatttgattttat 63  Q
    ||||||| |||||||| |||||||||||||| |||| ||||||||  ||||| ||||| ||||    
T  34551150 tctccaggataacttaagaaaacaacttataacttaaatgaaaacaatttgacttgatgttat 34551088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 63
Target Start/End: Complemental strand, 34770910 - 34770860
Alignment:
Q  13 cttatgaaaacaacttatagcttatatgaaaactttttgatttgattttat 63  Q
    |||||||||||||||||||||||| ||||||||  ||||| || |||||||    
T  34770910 cttatgaaaacaacttatagcttaaatgaaaacaatttgactttattttat 34770860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 13 - 92
Target Start/End: Complemental strand, 2091779 - 2091698
Alignment:
Q  13 cttatgaaaacaacttatagcttatatgaaaactttttga-tttg-attttattatagaaataacttttacattagcactta 92  Q
    |||||||||||||||| |||||||||| |||||  ||||| |||| ||||  ||||||||||||||| ||||  ||||||||    
T  2091779 cttatgaaaacaacttgtagcttatattaaaacaatttgagtttgtatttcgttatagaaataacttatacacaagcactta 2091698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 1117374 - 1117327
Alignment:
Q  1 tctccagaataacttatgaaaacaacttatagcttatatgaaaactttt 49  Q
    ||||||| ||| ||||||||| |||||||||||||||||||||| ||||    
T  1117374 tctccagcatagcttatgaaa-caacttatagcttatatgaaaattttt 1117327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 45
Target Start/End: Complemental strand, 7645996 - 7645964
Alignment:
Q  13 cttatgaaaacaacttatagcttatatgaaaac 45  Q
    |||||||||||||||||||||||| ||||||||    
T  7645996 cttatgaaaacaacttatagcttacatgaaaac 7645964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 13652245 - 13652201
Alignment:
Q  1 tctccagaataacttatgaaaacaacttatagcttatatgaaaac 45  Q
    ||||||||||| ||||| ||||||| ||||| |||||||||||||    
T  13652245 tctccagaatagcttataaaaacaatttataacttatatgaaaac 13652201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 13710888 - 13710844
Alignment:
Q  1 tctccagaataacttatgaaaacaacttatagcttatatgaaaac 45  Q
    ||||||||||| ||||| ||||||| ||||| |||||||||||||    
T  13710888 tctccagaatagcttataaaaacaatttataacttatatgaaaac 13710844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 45
Target Start/End: Original strand, 16210942 - 16210970
Alignment:
Q  17 tgaaaacaacttatagcttatatgaaaac 45  Q
    |||||||||||||||||||||||||||||    
T  16210942 tgaaaacaacttatagcttatatgaaaac 16210970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 40157542 - 40157498
Alignment:
Q  1 tctccagaataacttatgaaaacaacttatagcttatatgaaaac 45  Q
    ||||| ||||||| |||||||||| |||||||||||||| |||||    
T  40157542 tctccggaataacatatgaaaacatcttatagcttatattaaaac 40157498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 45
Target Start/End: Original strand, 43704430 - 43704462
Alignment:
Q  13 cttatgaaaacaacttatagcttatatgaaaac 45  Q
    |||||||||||||||||||| ||||||||||||    
T  43704430 cttatgaaaacaacttatagtttatatgaaaac 43704462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 10)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 6 - 44
Target Start/End: Complemental strand, 25507374 - 25507336
Alignment:
Q  6 agaataacttatgaaaacaacttatagcttatatgaaaa 44  Q
    |||||||||||||||||||||||||||||||||||||||    
T  25507374 agaataacttatgaaaacaacttatagcttatatgaaaa 25507336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 24909694 - 24909651
Alignment:
Q  1 tctccagaataacttatgaaaacaacttatagcttatatgaaaa 44  Q
    |||||| |||| ||||||||||||||||||||||||||||||||    
T  24909694 tctccacaatatcttatgaaaacaacttatagcttatatgaaaa 24909651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 44
Target Start/End: Original strand, 25558239 - 25558274
Alignment:
Q  9 ataacttatgaaaacaacttatagcttatatgaaaa 44  Q
    ||||||||||||||||||||||||||||||||||||    
T  25558239 ataacttatgaaaacaacttatagcttatatgaaaa 25558274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 44
Target Start/End: Original strand, 25558437 - 25558472
Alignment:
Q  9 ataacttatgaaaacaacttatagcttatatgaaaa 44  Q
    ||||||||||||||||||||||||||||||||||||    
T  25558437 ataacttatgaaaacaacttatagcttatatgaaaa 25558472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 24895386 - 24895343
Alignment:
Q  1 tctccagaataacttatgaaaacaacttatagcttatatgaaaa 44  Q
    |||||| |||| ||| ||||||||||||||||||||||||||||    
T  24895386 tctccacaatatcttgtgaaaacaacttatagcttatatgaaaa 24895343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 63
Target Start/End: Complemental strand, 1417282 - 1417232
Alignment:
Q  13 cttatgaaaacaacttatagcttatatgaaaactttttgatttgattttat 63  Q
    |||||||||||||||||| ||||||||||||||  ||||| || |||||||    
T  1417282 cttatgaaaacaacttattgcttatatgaaaacaatttgactttattttat 1417232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 33709478 - 33709416
Alignment:
Q  1 tctccagaataacttatgaaaacaacttatagcttatatgaaaactttttgatttgattttat 63  Q
    |||| |||||||||||||||||||  |||||||||||||||| |   |||||||| |||||||    
T  33709478 tctcgagaataacttatgaaaacagtttatagcttatatgaagatagtttgattttattttat 33709416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 39505986 - 39505944
Alignment:
Q  1 tctccagaataacttatgaaaacaacttatagcttatatgaaa 43  Q
    ||||||||||| |||||||||||||||||  ||||||||||||    
T  39505986 tctccagaatagcttatgaaaacaacttaatgcttatatgaaa 39505944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 51
Target Start/End: Original strand, 46104668 - 46104702
Alignment:
Q  17 tgaaaacaacttatagcttatatgaaaactttttg 51  Q
    |||||||||||||||||||||||||||||| ||||    
T  46104668 tgaaaacaacttatagcttatatgaaaactatttg 46104702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 45
Target Start/End: Original strand, 9527142 - 9527174
Alignment:
Q  13 cttatgaaaacaacttatagcttatatgaaaac 45  Q
    |||||||||||||||||||| ||||||||||||    
T  9527142 cttatgaaaacaacttatagtttatatgaaaac 9527174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 58 - 140
Target Start/End: Complemental strand, 18884847 - 18884762
Alignment:
Q  58 ttttattatagaaataacttttacattagcacttaaatgataaacac--at-ctataagtgcttgatgaagttgtttatccaaaca 140  Q
    |||| ||||||||||||||| ||||| |||||||| |||||||| ||  || ||||||||||||||| ||| ||||||||||||||    
T  18884847 tttttttatagaaataacttatacatgagcacttatatgataaaaactaatgctataagtgcttgattaagctgtttatccaaaca 18884762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 39983372 - 39983311
Alignment:
Q  1 tctccagaataacttatgaaaacaacttatagcttatatgaaaactttttgatttgatttta 62  Q
    ||||||| ||| |||||||||||||||||||||||||||||||| | ||| |||| ||||||    
T  39983372 tctccaggatagcttatgaaaacaacttatagcttatatgaaaattattttattttatttta 39983311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 37276776 - 37276732
Alignment:
Q  1 tctccagaataacttatgaaaacaacttatagcttatatgaaaac 45  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||    
T  37276776 tctccaggataacttatgaaaacaacttataacttatatgaaaac 37276732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 40158748 - 40158704
Alignment:
Q  1 tctccagaataacttatgaaaacaacttatagcttatatgaaaac 45  Q
    |||||||||||||||||||||||||||||| ||||||| ||||||    
T  40158748 tctccagaataacttatgaaaacaacttattgcttatacgaaaac 40158704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 63
Target Start/End: Original strand, 23143029 - 23143080
Alignment:
Q  12 acttatgaaaacaacttatagcttatatgaaaactttttgatttgattttat 63  Q
    |||||||||||||||| |||||||||| ||||||  ||||||||||||||||    
T  23143029 acttatgaaaacaactaatagcttataagaaaacaatttgatttgattttat 23143080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 63
Target Start/End: Original strand, 23554819 - 23554870
Alignment:
Q  12 acttatgaaaacaacttatagcttatatgaaaactttttgatttgattttat 63  Q
    |||||||||||||||| |||||||||| ||||||  ||||||||||||||||    
T  23554819 acttatgaaaacaactaatagcttataagaaaacaatttgatttgattttat 23554870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 13 - 63
Target Start/End: Complemental strand, 11513916 - 11513866
Alignment:
Q  13 cttatgaaaacaacttatagcttatatgaaaactttttgatttgattttat 63  Q
    |||||||||||||||||||||||||||||||||  ||||| || |||||||    
T  11513916 cttatgaaaacaacttatagcttatatgaaaacaatttgactttattttat 11513866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 42621415 - 42621452
Alignment:
Q  1 tctccagaataacttatgaaaacaacttatagcttata 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  42621415 tctccagaataacttatgaaaacagcttatagcttata 42621452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 45
Target Start/End: Original strand, 35755550 - 35755586
Alignment:
Q  9 ataacttatgaaaacaacttatagcttatatgaaaac 45  Q
    |||||||||||||||||||||||||||| ||||||||    
T  35755550 ataacttatgaaaacaacttatagcttacatgaaaac 35755586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 13869135 - 13869178
Alignment:
Q  1 tctccagaataacttatgaaaacaacttatagcttatatgaaaa 44  Q
    ||||||| |||||||||||||||| ||||||||||| |||||||    
T  13869135 tctccaggataacttatgaaaacagcttatagcttagatgaaaa 13869178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 63
Target Start/End: Original strand, 5043612 - 5043662
Alignment:
Q  13 cttatgaaaacaacttatagcttatatgaaaactttttgatttgattttat 63  Q
    |||||||||||||||| ||||||||||||||||  ||||| || |||||||    
T  5043612 cttatgaaaacaacttctagcttatatgaaaacagtttgactttattttat 5043662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 63
Target Start/End: Complemental strand, 33942168 - 33942118
Alignment:
Q  13 cttatgaaaacaacttatagcttatatgaaaactttttgatttgattttat 63  Q
    |||||||||||||||||||||||| ||||||||  ||||| || |||||||    
T  33942168 cttatgaaaacaacttatagcttacatgaaaacagtttgactttattttat 33942118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 64 - 140
Target Start/End: Original strand, 11393476 - 11393555
Alignment:
Q  64 tatagaaataacttttacattagcacttaaatgataaacacat---ctataagtgcttgatgaagttgtttatccaaaca 140  Q
    |||||||||| ||| || || |||||||| ||||||||||| |   |||||||||||| || ||| ||||||||||||||    
T  11393476 tatagaaatagcttatagataagcacttatatgataaacacttgtgctataagtgcttaattaagctgtttatccaaaca 11393555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 64 - 140
Target Start/End: Original strand, 11410137 - 11410216
Alignment:
Q  64 tatagaaataacttttacattagcacttaaatgataaacacat---ctataagtgcttgatgaagttgtttatccaaaca 140  Q
    |||||||||| ||| || || |||||||| ||||||||||| |   |||||||||||| || ||| ||||||||||||||    
T  11410137 tatagaaatagcttatagataagcacttatatgataaacacttgtgctataagtgcttaattaagctgtttatccaaaca 11410216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 9395156 - 9395116
Alignment:
Q  5 cagaataacttatgaaaacaacttatagcttatatgaaaac 45  Q
    |||||||||| ||||||||| ||||||| ||||||||||||    
T  9395156 cagaataactaatgaaaacagcttatagattatatgaaaac 9395116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 9886340 - 9886300
Alignment:
Q  3 tccagaataacttatgaaaacaacttatagcttatatgaaa 43  Q
    ||||| ||| |||| ||||||||||||||||||||||||||    
T  9886340 tccaggatagcttaggaaaacaacttatagcttatatgaaa 9886300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 15377791 - 15377751
Alignment:
Q  5 cagaataacttatgaaaacaacttatagcttatatgaaaac 45  Q
    ||||||| |||||||||||| |||||| |||||||||||||    
T  15377791 cagaatagcttatgaaaacagcttataacttatatgaaaac 15377751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 45
Target Start/End: Complemental strand, 15780095 - 15780063
Alignment:
Q  13 cttatgaaaacaacttatagcttatatgaaaac 45  Q
    |||||||||||||||||||| ||||||||||||    
T  15780095 cttatgaaaacaacttatagattatatgaaaac 15780063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 45
Target Start/End: Complemental strand, 18066146 - 18066114
Alignment:
Q  13 cttatgaaaacaacttatagcttatatgaaaac 45  Q
    |||||||||||| ||||||||||||||||||||    
T  18066146 cttatgaaaacagcttatagcttatatgaaaac 18066114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 45
Target Start/End: Complemental strand, 25800847 - 25800815
Alignment:
Q  13 cttatgaaaacaacttatagcttatatgaaaac 45  Q
    |||||||||||| ||||||||||||||||||||    
T  25800847 cttatgaaaacagcttatagcttatatgaaaac 25800815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 45
Target Start/End: Complemental strand, 42592357 - 42592325
Alignment:
Q  13 cttatgaaaacaacttatagcttatatgaaaac 45  Q
    |||||||||||| ||||||||||||||||||||    
T  42592357 cttatgaaaacagcttatagcttatatgaaaac 42592325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 22)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 9 - 55
Target Start/End: Complemental strand, 15515563 - 15515517
Alignment:
Q  9 ataacttatgaaaacaacttatagcttatatgaaaactttttgattt 55  Q
    |||||||||||||||||||||||||||||| |||||| |||||||||    
T  15515563 ataacttatgaaaacaacttatagcttatacgaaaacattttgattt 15515517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 25005837 - 25005881
Alignment:
Q  1 tctccagaataacttatgaaaacaacttatagcttatatgaaaac 45  Q
    ||||||| ||| |||||||||||||||||||||||||||||||||    
T  25005837 tctccaggatagcttatgaaaacaacttatagcttatatgaaaac 25005881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 13 - 63
Target Start/End: Complemental strand, 30371166 - 30371116
Alignment:
Q  13 cttatgaaaacaacttatagcttatatgaaaactttttgatttgattttat 63  Q
    |||||||||||||||||||||||||||||||||  ||||| || |||||||    
T  30371166 cttatgaaaacaacttatagcttatatgaaaacaatttgagtttattttat 30371116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 7218114 - 7218175
Alignment:
Q  1 tctccagaataacttatgaaaacaacttatagcttatatgaaaactttttgatttgatttta 62  Q
    ||||||| |||  ||||||||||||||||||||||||||||||||  ||||| || ||||||    
T  7218114 tctccaggataggttatgaaaacaacttatagcttatatgaaaacaatttgactttatttta 7218175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 62
Target Start/End: Original strand, 25006086 - 25006135
Alignment:
Q  13 cttatgaaaacaacttatagcttatatgaaaactttttgatttgatttta 62  Q
    |||||||||||||||||||||||||||||||||  ||||| || ||||||    
T  25006086 cttatgaaaacaacttatagcttatatgaaaacaatttgactttatttta 25006135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 45
Target Start/End: Original strand, 12564926 - 12564958
Alignment:
Q  13 cttatgaaaacaacttatagcttatatgaaaac 45  Q
    |||||||||||||||||||||||||||||||||    
T  12564926 cttatgaaaacaacttatagcttatatgaaaac 12564958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 17269280 - 17269236
Alignment:
Q  1 tctccagaataacttatgaaaacaacttatagcttatatgaaaac 45  Q
    ||||||| ||| |||||||||||||||||| ||||||||||||||    
T  17269280 tctccaggatagcttatgaaaacaacttattgcttatatgaaaac 17269236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 37272626 - 37272670
Alignment:
Q  1 tctccagaataacttatgaaaacaacttatagcttatatgaaaac 45  Q
    ||||||| |||| ||||||||||| ||||||||||||||||||||    
T  37272626 tctccaggataatttatgaaaacagcttatagcttatatgaaaac 37272670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 15361743 - 15361700
Alignment:
Q  1 tctccagaataacttatgaaaacaacttatagcttatatgaaaa 44  Q
    |||| |||||| |||||||||||| |||||||||||||||||||    
T  15361743 tctcaagaatatcttatgaaaacagcttatagcttatatgaaaa 15361700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 4019637 - 4019694
Alignment:
Q  5 cagaataacttatgaaaacaacttatagcttatatgaaaactttttgatttgattttat 63  Q
    ||||||| ||||||||| || ||||||||||| ||||||||| ||||| ||||||||||    
T  4019637 cagaatagcttatgaaa-cagcttatagcttacatgaaaactatttgacttgattttat 4019694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 63
Target Start/End: Original strand, 27738232 - 27738282
Alignment:
Q  13 cttatgaaaacaacttatagcttatatgaaaactttttgatttgattttat 63  Q
    ||||||||||||| |||||||||||||||||||  ||||| || |||||||    
T  27738232 cttatgaaaacaaattatagcttatatgaaaacaatttgactttattttat 27738282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 45
Target Start/End: Original strand, 28689508 - 28689538
Alignment:
Q  15 tatgaaaacaacttatagcttatatgaaaac 45  Q
    |||||||||||||||||||||||||||||||    
T  28689508 tatgaaaacaacttatagcttatatgaaaac 28689538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 51957423 - 51957461
Alignment:
Q  1 tctccagaataacttatgaaaacaacttatagcttatat 39  Q
    ||||||||||||||||||||||||| ||||| |||||||    
T  51957423 tctccagaataacttatgaaaacaatttataacttatat 51957461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 41
Target Start/End: Original strand, 5592737 - 5592765
Alignment:
Q  13 cttatgaaaacaacttatagcttatatga 41  Q
    |||||||||||||||||||||||||||||    
T  5592737 cttatgaaaacaacttatagcttatatga 5592765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 45
Target Start/End: Complemental strand, 8130454 - 8130422
Alignment:
Q  13 cttatgaaaacaacttatagcttatatgaaaac 45  Q
    ||||||||||||||||||||||||| |||||||    
T  8130454 cttatgaaaacaacttatagcttatgtgaaaac 8130422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 44
Target Start/End: Original strand, 10581124 - 10581160
Alignment:
Q  8 aataacttatgaaaacaacttatagcttatatgaaaa 44  Q
    |||| |||||||||||||||||||||||| |||||||    
T  10581124 aatagcttatgaaaacaacttatagcttaaatgaaaa 10581160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 43
Target Start/End: Original strand, 17422992 - 17423020
Alignment:
Q  15 tatgaaaacaacttatagcttatatgaaa 43  Q
    |||||||||||||||||||||||||||||    
T  17422992 tatgaaaacaacttatagcttatatgaaa 17423020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 63
Target Start/End: Complemental strand, 21516393 - 21516341
Alignment:
Q  11 aacttatgaaaacaacttatagcttatatgaaaactttttgatttgattttat 63  Q
    |||||||||||| ||||| ||| ||||||||||||| ||||| || |||||||    
T  21516393 aacttatgaaaataacttctagtttatatgaaaactatttgacttcattttat 21516341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 66
Target Start/End: Original strand, 27887171 - 27887223
Alignment:
Q  14 ttatgaaaacaacttatagcttatatgaaaactttttgatttgattttattat 66  Q
    ||||||||||||||||||||||||||| ||| | ||||| || ||||| ||||    
T  27887171 ttatgaaaacaacttatagcttatatggaaattgtttgactttattttcttat 27887223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 44
Target Start/End: Original strand, 29007771 - 29007799
Alignment:
Q  16 atgaaaacaacttatagcttatatgaaaa 44  Q
    |||||||||||||||||||||||||||||    
T  29007771 atgaaaacaacttatagcttatatgaaaa 29007799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 41
Target Start/End: Original strand, 29045964 - 29045992
Alignment:
Q  13 cttatgaaaacaacttatagcttatatga 41  Q
    |||||||||||||||||||||||||||||    
T  29045964 cttatgaaaacaacttatagcttatatga 29045992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 45
Target Start/End: Original strand, 33527195 - 33527231
Alignment:
Q  9 ataacttatgaaaacaacttatagcttatatgaaaac 45  Q
    |||||||||||||||| ||||||| ||||||||||||    
T  33527195 ataacttatgaaaacagcttatagattatatgaaaac 33527231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 37; Significance: 0.000000000005; HSPs: 25)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 24444066 - 24444006
Alignment:
Q  3 tccagaataacttatgaaaacaacttatagcttatatgaaaactttttgatttgattttat 63  Q
    |||| |||| |||||||||||||||||||||||||||||||| | ||||| || |||||||    
T  24444066 tccacaatagcttatgaaaacaacttatagcttatatgaaaattgtttgaatttattttat 24444006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 8468978 - 8468935
Alignment:
Q  1 tctccagaataacttatgaaaacaacttatagcttatatgaaaa 44  Q
    |||| |||||||||||||||||||||| ||||||||||||||||    
T  8468978 tctctagaataacttatgaaaacaactaatagcttatatgaaaa 8468935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 64
Target Start/End: Original strand, 30207623 - 30207673
Alignment:
Q  13 cttatgaaaacaacttatagcttatatgaaaactttttgatttgattttatt 64  Q
    |||||||||||||||||||||||||||||||||  |||||||| ||||||||    
T  30207623 cttatgaaaacaacttatagcttatatgaaaacagtttgattt-attttatt 30207673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 13 - 63
Target Start/End: Complemental strand, 53626794 - 53626744
Alignment:
Q  13 cttatgaaaacaacttatagcttatatgaaaactttttgatttgattttat 63  Q
    |||||||||||| |||||||||||||||||||| |||||| || |||||||    
T  53626794 cttatgaaaacagcttatagcttatatgaaaacattttgaatttattttat 53626744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 29373934 - 29373978
Alignment:
Q  8 aataacttatgaaaacaacttatagcttatatgaaaactttttga 52  Q
    |||||||||||||||||| |||||||||||||||| || ||||||    
T  29373934 aataacttatgaaaacaaattatagcttatatgaatacattttga 29373978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 44
Target Start/End: Complemental strand, 11842232 - 11842202
Alignment:
Q  14 ttatgaaaacaacttatagcttatatgaaaa 44  Q
    |||||||||||||||||||||||||||||||    
T  11842232 ttatgaaaacaacttatagcttatatgaaaa 11842202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 13949884 - 13949946
Alignment:
Q  1 tctccagaataacttatgaaaacaacttatagcttatatgaaaactttttgatttgattttat 63  Q
    |||||||| || |||||  ||||||||||||||||||||||||||  ||||| || |||||||    
T  13949884 tctccagagtagcttatacaaacaacttatagcttatatgaaaacaatttgactttattttat 13949946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 63
Target Start/End: Original strand, 32920448 - 32920502
Alignment:
Q  9 ataacttatgaaaacaacttatagcttatatgaaaactttttgatttgattttat 63  Q
    ||||||||||||||||||||||||||| ||| |||||  ||||| || |||||||    
T  32920448 ataacttatgaaaacaacttatagcttctattaaaacgatttgactttattttat 32920502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 44
Target Start/End: Complemental strand, 49219156 - 49219126
Alignment:
Q  14 ttatgaaaacaacttatagcttatatgaaaa 44  Q
    |||||||||||||||||||||||||||||||    
T  49219156 ttatgaaaacaacttatagcttatatgaaaa 49219126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 7694050 - 7694087
Alignment:
Q  1 tctccagaataacttatgaaaacaacttatagcttata 38  Q
    ||||||| |||||||||||||||| |||||||||||||    
T  7694050 tctccaggataacttatgaaaacagcttatagcttata 7694087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 44
Target Start/End: Complemental strand, 9841094 - 9841053
Alignment:
Q  3 tccagaataacttatgaaaacaacttatagcttatatgaaaa 44  Q
    ||||| ||| |||||||||||| |||||||||||||||||||    
T  9841094 tccaggatagcttatgaaaacatcttatagcttatatgaaaa 9841053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 44
Target Start/End: Complemental strand, 24091491 - 24091450
Alignment:
Q  3 tccagaataacttatgaaaacaacttatagcttatatgaaaa 44  Q
    ||||| ||||||||||||||||  ||||||||||||||||||    
T  24091491 tccaggataacttatgaaaacagtttatagcttatatgaaaa 24091450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 14 - 63
Target Start/End: Original strand, 45128363 - 45128412
Alignment:
Q  14 ttatgaaaacaacttatagcttatatgaaaactttttgatttgattttat 63  Q
    |||||||||||| ||||||||||||||| ||   ||||||||||||||||    
T  45128363 ttatgaaaacaatttatagcttatatgagaataatttgatttgattttat 45128412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 45
Target Start/End: Original strand, 8422895 - 8422923
Alignment:
Q  17 tgaaaacaacttatagcttatatgaaaac 45  Q
    |||||||||||||||||||||||||||||    
T  8422895 tgaaaacaacttatagcttatatgaaaac 8422923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 10192314 - 10192270
Alignment:
Q  1 tctccagaataacttatgaaaacaacttatagcttatatgaaaac 45  Q
    ||||||| ||| ||| ||||||||||||||| |||||||||||||    
T  10192314 tctccaggatagcttttgaaaacaacttataacttatatgaaaac 10192270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 102
Target Start/End: Complemental strand, 11785248 - 11785204
Alignment:
Q  58 ttttattatagaaataacttttacattagcacttaaatgataaac 102  Q
    |||| |||||||||| |||| ||||||| ||||||||||||||||    
T  11785248 ttttgttatagaaatcacttgtacattatcacttaaatgataaac 11785204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 45
Target Start/End: Complemental strand, 18630694 - 18630666
Alignment:
Q  17 tgaaaacaacttatagcttatatgaaaac 45  Q
    |||||||||||||||||||||||||||||    
T  18630694 tgaaaacaacttatagcttatatgaaaac 18630666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 63
Target Start/End: Original strand, 25434518 - 25434562
Alignment:
Q  19 aaaacaacttatagcttatatgaaaactttttgatttgattttat 63  Q
    ||||||||||||||||||||||||||| | |||| || |||||||    
T  25434518 aaaacaacttatagcttatatgaaaacatattgactttattttat 25434562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 45
Target Start/End: Complemental strand, 25885881 - 25885845
Alignment:
Q  9 ataacttatgaaaacaacttatagcttatatgaaaac 45  Q
    |||||||||||||||||||||||||||| | ||||||    
T  25885881 ataacttatgaaaacaacttatagcttacacgaaaac 25885845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 45
Target Start/End: Complemental strand, 29778813 - 29778781
Alignment:
Q  13 cttatgaaaacaacttatagcttatatgaaaac 45  Q
    ||||||||||||||||| |||||||||||||||    
T  29778813 cttatgaaaacaacttacagcttatatgaaaac 29778781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 45
Target Start/End: Complemental strand, 36460604 - 36460572
Alignment:
Q  13 cttatgaaaacaacttatagcttatatgaaaac 45  Q
    |||||||||||| ||||||||||||||||||||    
T  36460604 cttatgaaaacagcttatagcttatatgaaaac 36460572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 45
Target Start/End: Original strand, 36722717 - 36722753
Alignment:
Q  9 ataacttatgaaaacaacttatagcttatatgaaaac 45  Q
    ||||||||| ||||||||||||| |||||||||||||    
T  36722717 ataacttatcaaaacaacttataacttatatgaaaac 36722753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 36824021 - 36823946
Alignment:
Q  8 aataacttatgaaaacaacttatagcttatatgaaaactttttgatttgattt-tattatagaaataacttttacat 83  Q
    |||| ||||||||| || ||||| ||||||||||||||  |||||||| |||| ||||||||||||| ||| |||||    
T  36824021 aatagcttatgaaatcagcttat-gcttatatgaaaacaatttgattttatttatattatagaaatagcttatacat 36823946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 45
Target Start/End: Complemental strand, 42866086 - 42866054
Alignment:
Q  13 cttatgaaaacaacttatagcttatatgaaaac 45  Q
    ||||||||||||||||||||||||||| |||||    
T  42866086 cttatgaaaacaacttatagcttatataaaaac 42866054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 45
Target Start/End: Original strand, 55870393 - 55870425
Alignment:
Q  13 cttatgaaaacaacttatagcttatatgaaaac 45  Q
    ||||||||||||||||||||||||| |||||||    
T  55870393 cttatgaaaacaacttatagcttatgtgaaaac 55870425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0508 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0508
Description:

Target: scaffold0508; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 100
Target Start/End: Original strand, 9828 - 9921
Alignment:
Q  14 ttatgaaaacaacttatagcttatatgaaaactttttgatttgatttta-------ttatagaaataacttttacattagcacttaaatgataa 100  Q
    ||||||||||||| |||| |||||||||||||||||||| || ||||||       ||||||||||||||| ||||| ||||| || |||||||    
T  9828 ttatgaaaacaacctataacttatatgaaaactttttgacttaattttattttttgttatagaaataacttatacataagcacctatatgataa 9921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 20202 - 20147
Alignment:
Q  8 aataacttatgaaaacaacttatagcttatatgaaaactttttgatttgattttat 63  Q
    |||||||||||||||||||| ||||||||||||| |||| ||||| || |||||||    
T  20202 aataacttatgaaaacaactaatagcttatatgataactgtttgactttattttat 20147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 100
Target Start/End: Complemental strand, 27593 - 27500
Alignment:
Q  14 ttatgaaaacaacttatagcttatatgaaaactttttgatttgatttta-------ttatagaaataacttttacattagcacttaaatgataa 100  Q
    ||||||||||||||||||| ||||||||||||  ||||| || ||||||       ||||||||||||||| ||||| |||||||| |||||||    
T  27593 ttatgaaaacaacttatagtttatatgaaaacaatttgactttattttatcttctgttatagaaataacttatacataagcacttacatgataa 27500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 33; Significance: 0.000000001; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 1275179 - 1275135
Alignment:
Q  1 tctccagaataacttatgaaaacaacttatagcttatatgaaaac 45  Q
    ||||||| ||||| |||||||||| ||||||||||||||||||||    
T  1275179 tctccaggataacatatgaaaacagcttatagcttatatgaaaac 1275135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 45
Target Start/End: Original strand, 8035196 - 8035232
Alignment:
Q  9 ataacttatgaaaacaacttatagcttatatgaaaac 45  Q
    |||||||||||||||||||| ||||||||||||||||    
T  8035196 ataacttatgaaaacaacttctagcttatatgaaaac 8035232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 44
Target Start/End: Complemental strand, 2117425 - 2117390
Alignment:
Q  9 ataacttatgaaaacaacttatagcttatatgaaaa 44  Q
    |||||||||||||||||||||||| |||||||||||    
T  2117425 ataacttatgaaaacaacttatagattatatgaaaa 2117390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 44
Target Start/End: Original strand, 7485120 - 7485151
Alignment:
Q  13 cttatgaaaacaacttatagcttatatgaaaa 44  Q
    ||||||||||||||||||||||||||||||||    
T  7485120 cttatgaaaacaacttatagcttatatgaaaa 7485151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 63
Target Start/End: Complemental strand, 4006732 - 4006682
Alignment:
Q  13 cttatgaaaacaacttatagcttatatgaaaactttttgatttgattttat 63  Q
    ||||||||||||||||||||||||||| |||||  ||||| || |||||||    
T  4006732 cttatgaaaacaacttatagcttatataaaaacaatttgactttattttat 4006682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 105
Target Start/End: Original strand, 4325413 - 4325459
Alignment:
Q  59 tttattatagaaataacttttacattagcacttaaatgataaacaca 105  Q
    |||||||||||||||||||  |||| |||||||| ||||||||||||    
T  4325413 tttattatagaaataacttagacataagcacttatatgataaacaca 4325459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 51
Target Start/End: Complemental strand, 5623174 - 5623136
Alignment:
Q  13 cttatgaaaacaacttatagcttatatgaaaactttttg 51  Q
    |||||||||||||||||||| ||||||||||||| ||||    
T  5623174 cttatgaaaacaacttatagtttatatgaaaactatttg 5623136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 63
Target Start/End: Original strand, 10150304 - 10150354
Alignment:
Q  13 cttatgaaaacaacttatagcttatatgaaaactttttgatttgattttat 63  Q
    |||||||||||| |||||| || ||||||||||  ||||||||||||||||    
T  10150304 cttatgaaaacatcttataactgatatgaaaacaatttgatttgattttat 10150354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 14 - 63
Target Start/End: Original strand, 10452413 - 10452462
Alignment:
Q  14 ttatgaaaacaacttatagcttatatgaaaactttttgatttgattttat 63  Q
    ||||| |||||||||||||||||||||||||   |||||||| |||||||    
T  10452413 ttatggaaacaacttatagcttatatgaaaatagtttgattttattttat 10452462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 4246440 - 4246396
Alignment:
Q  1 tctccagaataacttatgaaaacaacttatagcttatatgaaaac 45  Q
    |||||| |||| |||||||||||| ||||||| ||||||||||||    
T  4246440 tctccataatagcttatgaaaacagcttatagattatatgaaaac 4246396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 22742394 - 22742334
Alignment:
Q  3 tccagaataacttatgaaaacaacttatagcttatatgaaaactttttgatttgattttat 63  Q
    ||||| ||||||||| |||| | ||||||||||||||||||||  ||||| || |||||||    
T  22742394 tccaggataacttataaaaatagcttatagcttatatgaaaacaatttgactttattttat 22742334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 32386603 - 32386647
Alignment:
Q  1 tctccagaataacttatgaaaacaacttatagcttatatgaaaac 45  Q
    ||||||| |||||| ||||||||||| |||| |||||||||||||    
T  32386603 tctccaggataactaatgaaaacaacgtataccttatatgaaaac 32386647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 44
Target Start/End: Complemental strand, 32917233 - 32917205
Alignment:
Q  16 atgaaaacaacttatagcttatatgaaaa 44  Q
    |||||||||||||||||||||||||||||    
T  32917233 atgaaaacaacttatagcttatatgaaaa 32917205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 45
Target Start/End: Complemental strand, 40253 - 40217
Alignment:
Q  9 ataacttatgaaaacaacttatagcttatatgaaaac 45  Q
    |||||||||||||||||||||||||||| ||| ||||    
T  40253 ataacttatgaaaacaacttatagcttacatggaaac 40217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 45
Target Start/End: Original strand, 51998 - 52034
Alignment:
Q  9 ataacttatgaaaacaacttatagcttatatgaaaac 45  Q
    |||||| ||||||||| ||||||||||||||||||||    
T  51998 ataactaatgaaaacagcttatagcttatatgaaaac 52034  T

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